4-idle-time-kripke-32.ipynb

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  {
   "cell_type": "code",
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   "id": "df1e4775",
   "metadata": {},
   "outputs": [],
   "source": [
    "import pipit\n",
    "\n",
    "from pipit.plotting import _util\n",
    "_util.theme = \"paper\"\n",
    "import pandas as pd\n",
    "pd.set_option('max_colwidth', None)\n",
    "\n",
    "dir = './kripke/ScoreP-Kripke-32/'\n",
    "trace_32 = pipit.Trace.from_otf2(dir)\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 17,
   "id": "1f61eb60",
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       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>Process</th>\n",
       "      <th>Idle Time</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>16</th>\n",
       "      <td>16</td>\n",
       "      <td>1.370286e+08</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>0</th>\n",
       "      <td>0</td>\n",
       "      <td>1.248624e+08</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>3</td>\n",
       "      <td>1.138626e+08</td>\n",
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       "    <tr>\n",
       "      <th>15</th>\n",
       "      <td>15</td>\n",
       "      <td>1.138405e+08</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>1</th>\n",
       "      <td>1</td>\n",
       "      <td>1.117360e+08</td>\n",
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       "    <tr>\n",
       "      <th>12</th>\n",
       "      <td>12</td>\n",
       "      <td>1.088760e+08</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>31</th>\n",
       "      <td>31</td>\n",
       "      <td>1.061919e+08</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>28</th>\n",
       "      <td>28</td>\n",
       "      <td>1.049215e+08</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>19</th>\n",
       "      <td>19</td>\n",
       "      <td>9.966507e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>4</td>\n",
       "      <td>9.728771e+07</td>\n",
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       "      <th>8</th>\n",
       "      <td>8</td>\n",
       "      <td>9.285482e+07</td>\n",
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       "    <tr>\n",
       "      <th>30</th>\n",
       "      <td>30</td>\n",
       "      <td>8.358866e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>20</th>\n",
       "      <td>20</td>\n",
       "      <td>8.310160e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>18</th>\n",
       "      <td>18</td>\n",
       "      <td>7.944704e+07</td>\n",
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       "    <tr>\n",
       "      <th>2</th>\n",
       "      <td>2</td>\n",
       "      <td>7.896711e+07</td>\n",
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       "    <tr>\n",
       "      <th>17</th>\n",
       "      <td>17</td>\n",
       "      <td>7.461063e+07</td>\n",
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       "      <th>13</th>\n",
       "      <td>13</td>\n",
       "      <td>6.944336e+07</td>\n",
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       "    <tr>\n",
       "      <th>14</th>\n",
       "      <td>14</td>\n",
       "      <td>6.882685e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>24</th>\n",
       "      <td>24</td>\n",
       "      <td>6.871640e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>27</th>\n",
       "      <td>27</td>\n",
       "      <td>6.853246e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>11</th>\n",
       "      <td>11</td>\n",
       "      <td>6.770653e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>7</th>\n",
       "      <td>7</td>\n",
       "      <td>5.897876e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>10</th>\n",
       "      <td>10</td>\n",
       "      <td>5.668785e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>5</th>\n",
       "      <td>5</td>\n",
       "      <td>5.466074e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>29</th>\n",
       "      <td>29</td>\n",
       "      <td>5.424149e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>9</th>\n",
       "      <td>9</td>\n",
       "      <td>5.226429e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>23</th>\n",
       "      <td>23</td>\n",
       "      <td>5.190160e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>6</th>\n",
       "      <td>6</td>\n",
       "      <td>5.117850e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>21</th>\n",
       "      <td>21</td>\n",
       "      <td>4.782820e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>26</th>\n",
       "      <td>26</td>\n",
       "      <td>4.212813e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>22</th>\n",
       "      <td>22</td>\n",
       "      <td>4.187129e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>25</th>\n",
       "      <td>25</td>\n",
       "      <td>4.100697e+07</td>\n",
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      "text/plain": [
       "    Process     Idle Time\n",
       "16       16  1.370286e+08\n",
       "0         0  1.248624e+08\n",
       "3         3  1.138626e+08\n",
       "15       15  1.138405e+08\n",
       "1         1  1.117360e+08\n",
       "12       12  1.088760e+08\n",
       "31       31  1.061919e+08\n",
       "28       28  1.049215e+08\n",
       "19       19  9.966507e+07\n",
       "4         4  9.728771e+07\n",
       "8         8  9.285482e+07\n",
       "30       30  8.358866e+07\n",
       "20       20  8.310160e+07\n",
       "18       18  7.944704e+07\n",
       "2         2  7.896711e+07\n",
       "17       17  7.461063e+07\n",
       "13       13  6.944336e+07\n",
       "14       14  6.882685e+07\n",
       "24       24  6.871640e+07\n",
       "27       27  6.853246e+07\n",
       "11       11  6.770653e+07\n",
       "7         7  5.897876e+07\n",
       "10       10  5.668785e+07\n",
       "5         5  5.466074e+07\n",
       "29       29  5.424149e+07\n",
       "9         9  5.226429e+07\n",
       "23       23  5.190160e+07\n",
       "6         6  5.117850e+07\n",
       "21       21  4.782820e+07\n",
       "26       26  4.212813e+07\n",
       "22       22  4.187129e+07\n",
       "25       25  4.100697e+07"
      ]
     },
     "execution_count": 17,
     "metadata": {},
     "output_type": "execute_result"
    }
   ],
   "source": [
    "idle_32 = trace_32.idle_time(idle_functions=['MPI_Testany', 'MPI_Allreduce'], MPI_events=True)\n",
    "idle_32.sort_values(by=['Idle Time', 'Process'], ascending=False)"
   ]
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       "      console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n",
       "      root._bokeh_failed_load = true;\n",
       "    } else if (force !== true) {\n",
       "      const cell = $(document.getElementById(null)).parents('.cell').data().cell;\n",
       "      cell.output_area.append_execute_result(NB_LOAD_WARNING)\n",
       "    }\n",
       "  }\n",
       "\n",
       "  if (root._bokeh_is_loading === 0) {\n",
       "    console.debug(\"Bokeh: BokehJS loaded, going straight to plotting\");\n",
       "    run_inline_js();\n",
       "  } else {\n",
       "    load_libs(css_urls, js_urls, function() {\n",
       "      console.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n",
       "      run_inline_js();\n",
       "    });\n",
       "  }\n",
       "}(window));"
      ],
      "application/vnd.bokehjs_load.v0+json": "(function(root) {\n  function now() {\n    return new Date();\n  }\n\n  const force = true;\n\n  if (typeof root._bokeh_onload_callbacks === \"undefined\" || force === true) {\n    root._bokeh_onload_callbacks = [];\n    root._bokeh_is_loading = undefined;\n  }\n\n\n  if (typeof (root._bokeh_timeout) === \"undefined\" || force === true) {\n    root._bokeh_timeout = Date.now() + 5000;\n    root._bokeh_failed_load = false;\n  }\n\n  const NB_LOAD_WARNING = {'data': {'text/html':\n     \"<div style='background-color: #fdd'>\\n\"+\n     \"<p>\\n\"+\n     \"BokehJS does not appear to have successfully loaded. If loading BokehJS from CDN, this \\n\"+\n     \"may be due to a slow or bad network connection. Possible fixes:\\n\"+\n     \"</p>\\n\"+\n     \"<ul>\\n\"+\n     \"<li>re-rerun `output_notebook()` to attempt to load from CDN again, or</li>\\n\"+\n     \"<li>use INLINE resources instead, as so:</li>\\n\"+\n     \"</ul>\\n\"+\n     \"<code>\\n\"+\n     \"from bokeh.resources import INLINE\\n\"+\n     \"output_notebook(resources=INLINE)\\n\"+\n     \"</code>\\n\"+\n     \"</div>\"}};\n\n  function display_loaded() {\n    const el = document.getElementById(null);\n    if (el != null) {\n      el.textContent = \"BokehJS is loading...\";\n    }\n    if (root.Bokeh !== undefined) {\n      if (el != null) {\n        el.textContent = \"BokehJS \" + root.Bokeh.version + \" successfully loaded.\";\n      }\n    } else if (Date.now() < root._bokeh_timeout) {\n      setTimeout(display_loaded, 100)\n    }\n  }\n\n  function run_callbacks() {\n    try {\n      root._bokeh_onload_callbacks.forEach(function(callback) {\n        if (callback != null)\n          callback();\n      });\n    } finally {\n      delete root._bokeh_onload_callbacks\n    }\n    console.debug(\"Bokeh: all callbacks have finished\");\n  }\n\n  function load_libs(css_urls, js_urls, callback) {\n    if (css_urls == null) css_urls = [];\n    if (js_urls == null) js_urls = [];\n\n    root._bokeh_onload_callbacks.push(callback);\n    if (root._bokeh_is_loading > 0) {\n      console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n      return null;\n    }\n    if (js_urls == null || js_urls.length === 0) {\n      run_callbacks();\n      return null;\n    }\n    console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n    root._bokeh_is_loading = css_urls.length + js_urls.length;\n\n    function on_load() {\n      root._bokeh_is_loading--;\n      if (root._bokeh_is_loading === 0) {\n        console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n        run_callbacks()\n      }\n    }\n\n    function on_error(url) {\n      console.error(\"failed to load \" + url);\n    }\n\n    for (let i = 0; i < css_urls.length; i++) {\n      const url = css_urls[i];\n      const element = document.createElement(\"link\");\n      element.onload = on_load;\n      element.onerror = on_error.bind(null, url);\n      element.rel = \"stylesheet\";\n      element.type = \"text/css\";\n      element.href = url;\n      console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n      document.body.appendChild(element);\n    }\n\n    for (let i = 0; i < js_urls.length; i++) {\n      const url = js_urls[i];\n      const element = document.createElement('script');\n      element.onload = on_load;\n      element.onerror = on_error.bind(null, url);\n      element.async = false;\n      element.src = url;\n      console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n      document.head.appendChild(element);\n    }\n  };\n\n  function inject_raw_css(css) {\n    const element = document.createElement(\"style\");\n    element.appendChild(document.createTextNode(css));\n    document.body.appendChild(element);\n  }\n\n  const js_urls = [\"https://cdn.bokeh.org/bokeh/release/bokeh-2.4.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-gl-2.4.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-2.4.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-2.4.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-mathjax-2.4.3.min.js\"];\n  const css_urls = [];\n\n  const inline_js = [    function(Bokeh) {\n      Bokeh.set_log_level(\"info\");\n    },\nfunction(Bokeh) {\n    }\n  ];\n\n  function run_inline_js() {\n    if (root.Bokeh !== undefined || force === true) {\n          for (let i = 0; i < inline_js.length; i++) {\n      inline_js[i].call(root, root.Bokeh);\n    }\n} else if (Date.now() < root._bokeh_timeout) {\n      setTimeout(run_inline_js, 100);\n    } else if (!root._bokeh_failed_load) {\n      console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n      root._bokeh_failed_load = true;\n    } else if (force !== true) {\n      const cell = $(document.getElementById(null)).parents('.cell').data().cell;\n      cell.output_area.append_execute_result(NB_LOAD_WARNING)\n    }\n  }\n\n  if (root._bokeh_is_loading === 0) {\n    console.debug(\"Bokeh: BokehJS loaded, going straight to plotting\");\n    run_inline_js();\n  } else {\n    load_libs(css_urls, js_urls, function() {\n      console.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n      run_inline_js();\n    });\n  }\n}(window));"
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "application/vnd.bokehjs_exec.v0+json": "",
      "text/html": [
       "<script id=\"2752\">\n",
       "  (function() {\n",
       "    const xhr = new XMLHttpRequest()\n",
       "    xhr.responseType = 'blob';\n",
       "    xhr.open('GET', \"http://localhost:51673/autoload.js?bokeh-autoload-element=2752&bokeh-absolute-url=http://localhost:51673&resources=none\", true);\n",
       "    xhr.onload = function (event) {\n",
       "      const script = document.createElement('script');\n",
       "      const src = URL.createObjectURL(event.target.response);\n",
       "      script.src = src;\n",
       "      document.body.appendChild(script);\n",
       "    };\n",
       "    xhr.send();\n",
       "  })();\n",
       "</script>"
      ]
     },
     "metadata": {
      "application/vnd.bokehjs_exec.v0+json": {
       "server_id": "5feb46ccf8ad4b51b0c235feb77ddf07"
      }
     },
     "output_type": "display_data"
    },
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "ERROR:bokeh.server.protocol_handler:error handling message\n",
      " message: Message 'PATCH-DOC' content: {'events': [{'kind': 'MessageSent', 'msg_type': 'bokeh_event', 'msg_data': {'event_name': 'rangesupdate', 'event_values': {'x0': 1621268450.4278243, 'x1': 1840612344.776713, 'y0': 31.5, 'y1': -0.5}}}], 'references': []} \n",
      " error: NotImplementedError('Unexpected dshape <function dshape at 0x28cad3ca0>')\n",
      "Traceback (most recent call last):\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/protocol_handler.py\", line 97, in handle\n",
      "    work = await handler(message, connection)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/session.py\", line 95, in _needs_document_lock_wrapper\n",
      "    result = func(self, *args, **kwargs)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/session.py\", line 289, in _handle_patch\n",
      "    message.apply_to_document(self.document, self)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/protocol/messages/patch_doc.py\", line 115, in apply_to_document\n",
      "    invoke_with_curdoc(doc, lambda: doc.apply_json_patch(self.content, setter))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 408, in invoke_with_curdoc\n",
      "    return f()\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/protocol/messages/patch_doc.py\", line 115, in <lambda>\n",
      "    invoke_with_curdoc(doc, lambda: doc.apply_json_patch(self.content, setter))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/document.py\", line 391, in apply_json_patch\n",
      "    DocumentPatchedEvent.handle_json(self, event_json, references, setter)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/events.py\", line 259, in handle_json\n",
      "    handler(doc, event_json, references, setter)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/events.py\", line 300, in _handle_json\n",
      "    cb(event_json[\"msg_data\"])\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 355, in trigger_json_event\n",
      "    model._trigger_event(event)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/util/callback_manager.py\", line 119, in _trigger_event\n",
      "    self.document.callbacks.notify_event(cast(Model, self), event, invoke)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 247, in notify_event\n",
      "    invoke_with_curdoc(doc, callback_invoker)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 408, in invoke_with_curdoc\n",
      "    return f()\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/util/callback_manager.py\", line 115, in invoke\n",
      "    cast(EventCallbackWithEvent, callback)(event)\n",
      "  File \"/Users/movsesyanae/Programming/Research/pipit/pipit/plotting/core.py\", line 201, in update_cds\n",
      "    agg = cvs.points(small, x=\"Timestamp (ns)\", y=\"y\", agg=ds.count_cat(\"Name\"))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/core.py\", line 219, in points\n",
      "    return bypixel(source, self, glyph, agg)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/core.py\", line 1260, in bypixel\n",
      "    return bypixel.pipeline(source, schema, canvas, glyph, agg, antialias=antialias)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/utils.py\", line 109, in __call__\n",
      "    return lk[typ](head, *rest, **kwargs)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/data_libraries/pandas.py\", line 17, in pandas_pipeline\n",
      "    return glyph_dispatch(glyph, df, schema, canvas, summary, antialias=antialias)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/utils.py\", line 112, in __call__\n",
      "    return lk[cls](head, *rest, **kwargs)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/data_libraries/pandas.py\", line 46, in default\n",
      "    bases = create((height, width))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/compiler.py\", line 126, in <lambda>\n",
      "    return lambda shape: tuple(c(shape, array_module) for c in creators)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/compiler.py\", line 126, in <genexpr>\n",
      "    return lambda shape: tuple(c(shape, array_module) for c in creators)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/reductions.py\", line 604, in <lambda>\n",
      "    return lambda shape, array_module: self.reduction._build_create(\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/reductions.py\", line 305, in _build_create\n",
      "    raise NotImplementedError(f\"Unexpected dshape {dshape}\")\n",
      "NotImplementedError: Unexpected dshape <function dshape at 0x28cad3ca0>\n",
      "/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/protocol_handler.py:101: RuntimeWarning: coroutine 'WSHandler.send_message' was never awaited\n",
      "  work = connection.error(message, repr(e))\n",
      "ERROR:bokeh.server.protocol_handler:error handling message\n",
      " message: Message 'PATCH-DOC' content: {'events': [{'kind': 'MessageSent', 'msg_type': 'bokeh_event', 'msg_data': {'event_name': 'rangesupdate', 'event_values': {'x0': 1621268450.4278243, 'x1': 1840612344.776713, 'y0': 31.5, 'y1': -0.5}}}], 'references': []} \n",
      " error: NotImplementedError('Unexpected dshape <function dshape at 0x28cad3ca0>')\n",
      "Traceback (most recent call last):\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/protocol_handler.py\", line 97, in handle\n",
      "    work = await handler(message, connection)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/session.py\", line 95, in _needs_document_lock_wrapper\n",
      "    result = func(self, *args, **kwargs)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/session.py\", line 289, in _handle_patch\n",
      "    message.apply_to_document(self.document, self)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/protocol/messages/patch_doc.py\", line 115, in apply_to_document\n",
      "    invoke_with_curdoc(doc, lambda: doc.apply_json_patch(self.content, setter))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 408, in invoke_with_curdoc\n",
      "    return f()\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/protocol/messages/patch_doc.py\", line 115, in <lambda>\n",
      "    invoke_with_curdoc(doc, lambda: doc.apply_json_patch(self.content, setter))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/document.py\", line 391, in apply_json_patch\n",
      "    DocumentPatchedEvent.handle_json(self, event_json, references, setter)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/events.py\", line 259, in handle_json\n",
      "    handler(doc, event_json, references, setter)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/events.py\", line 300, in _handle_json\n",
      "    cb(event_json[\"msg_data\"])\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 355, in trigger_json_event\n",
      "    model._trigger_event(event)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/util/callback_manager.py\", line 119, in _trigger_event\n",
      "    self.document.callbacks.notify_event(cast(Model, self), event, invoke)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 247, in notify_event\n",
      "    invoke_with_curdoc(doc, callback_invoker)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 408, in invoke_with_curdoc\n",
      "    return f()\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/util/callback_manager.py\", line 115, in invoke\n",
      "    cast(EventCallbackWithEvent, callback)(event)\n",
      "  File \"/Users/movsesyanae/Programming/Research/pipit/pipit/plotting/core.py\", line 201, in update_cds\n",
      "    agg = cvs.points(small, x=\"Timestamp (ns)\", y=\"y\", agg=ds.count_cat(\"Name\"))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/core.py\", line 219, in points\n",
      "    return bypixel(source, self, glyph, agg)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/core.py\", line 1260, in bypixel\n",
      "    return bypixel.pipeline(source, schema, canvas, glyph, agg, antialias=antialias)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/utils.py\", line 109, in __call__\n",
      "    return lk[typ](head, *rest, **kwargs)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/data_libraries/pandas.py\", line 17, in pandas_pipeline\n",
      "    return glyph_dispatch(glyph, df, schema, canvas, summary, antialias=antialias)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/utils.py\", line 112, in __call__\n",
      "    return lk[cls](head, *rest, **kwargs)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/data_libraries/pandas.py\", line 46, in default\n",
      "    bases = create((height, width))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/compiler.py\", line 126, in <lambda>\n",
      "    return lambda shape: tuple(c(shape, array_module) for c in creators)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/compiler.py\", line 126, in <genexpr>\n",
      "    return lambda shape: tuple(c(shape, array_module) for c in creators)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/reductions.py\", line 604, in <lambda>\n",
      "    return lambda shape, array_module: self.reduction._build_create(\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/reductions.py\", line 305, in _build_create\n",
      "    raise NotImplementedError(f\"Unexpected dshape {dshape}\")\n",
      "NotImplementedError: Unexpected dshape <function dshape at 0x28cad3ca0>\n"
     ]
    },
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/protocol_handler.py:101: RuntimeWarning: coroutine 'WSHandler.send_message' was never awaited\n",
      "  work = connection.error(message, repr(e))\n",
      "ERROR:bokeh.server.protocol_handler:error handling message\n",
      " message: Message 'PATCH-DOC' content: {'events': [{'kind': 'MessageSent', 'msg_type': 'bokeh_event', 'msg_data': {'event_name': 'rangesupdate', 'event_values': {'x0': 1851472507.2493925, 'x1': 1913228169.2063117, 'y0': 31.5, 'y1': -0.5}}}], 'references': []} \n",
      " error: NotImplementedError('Unexpected dshape <function dshape at 0x28cad3ca0>')\n",
      "Traceback (most recent call last):\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/protocol_handler.py\", line 97, in handle\n",
      "    work = await handler(message, connection)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/session.py\", line 95, in _needs_document_lock_wrapper\n",
      "    result = func(self, *args, **kwargs)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/session.py\", line 289, in _handle_patch\n",
      "    message.apply_to_document(self.document, self)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/protocol/messages/patch_doc.py\", line 115, in apply_to_document\n",
      "    invoke_with_curdoc(doc, lambda: doc.apply_json_patch(self.content, setter))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 408, in invoke_with_curdoc\n",
      "    return f()\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/protocol/messages/patch_doc.py\", line 115, in <lambda>\n",
      "    invoke_with_curdoc(doc, lambda: doc.apply_json_patch(self.content, setter))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/document.py\", line 391, in apply_json_patch\n",
      "    DocumentPatchedEvent.handle_json(self, event_json, references, setter)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/events.py\", line 259, in handle_json\n",
      "    handler(doc, event_json, references, setter)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/events.py\", line 300, in _handle_json\n",
      "    cb(event_json[\"msg_data\"])\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 355, in trigger_json_event\n",
      "    model._trigger_event(event)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/util/callback_manager.py\", line 119, in _trigger_event\n",
      "    self.document.callbacks.notify_event(cast(Model, self), event, invoke)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 247, in notify_event\n",
      "    invoke_with_curdoc(doc, callback_invoker)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 408, in invoke_with_curdoc\n",
      "    return f()\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/util/callback_manager.py\", line 115, in invoke\n",
      "    cast(EventCallbackWithEvent, callback)(event)\n",
      "  File \"/Users/movsesyanae/Programming/Research/pipit/pipit/plotting/core.py\", line 201, in update_cds\n",
      "    agg = cvs.points(small, x=\"Timestamp (ns)\", y=\"y\", agg=ds.count_cat(\"Name\"))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/core.py\", line 219, in points\n",
      "    return bypixel(source, self, glyph, agg)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/core.py\", line 1260, in bypixel\n",
      "    return bypixel.pipeline(source, schema, canvas, glyph, agg, antialias=antialias)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/utils.py\", line 109, in __call__\n",
      "    return lk[typ](head, *rest, **kwargs)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/data_libraries/pandas.py\", line 17, in pandas_pipeline\n",
      "    return glyph_dispatch(glyph, df, schema, canvas, summary, antialias=antialias)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/utils.py\", line 112, in __call__\n",
      "    return lk[cls](head, *rest, **kwargs)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/data_libraries/pandas.py\", line 46, in default\n",
      "    bases = create((height, width))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/compiler.py\", line 126, in <lambda>\n",
      "    return lambda shape: tuple(c(shape, array_module) for c in creators)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/compiler.py\", line 126, in <genexpr>\n",
      "    return lambda shape: tuple(c(shape, array_module) for c in creators)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/reductions.py\", line 604, in <lambda>\n",
      "    return lambda shape, array_module: self.reduction._build_create(\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/reductions.py\", line 305, in _build_create\n",
      "    raise NotImplementedError(f\"Unexpected dshape {dshape}\")\n",
      "NotImplementedError: Unexpected dshape <function dshape at 0x28cad3ca0>\n",
      "/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/protocol_handler.py:101: RuntimeWarning: coroutine 'WSHandler.send_message' was never awaited\n",
      "  work = connection.error(message, repr(e))\n"
     ]
    }
   ],
   "source": [
    "trace_32.plot_timeline()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 38,
   "id": "c949bb6f",
   "metadata": {},
   "outputs": [],
   "source": [
    "df = trace_32.events\n",
    "dff = df.loc[df['Timestamp (ns)'] > 1530000000].loc[df['Timestamp (ns)'] < 1910000000]\n",
    "most_idle = dff.loc[dff['Process'] == 25]\n",
    "least_idle = dff.loc[dff['Process'] == 16]"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 34,
   "id": "63d8afb5",
   "metadata": {},
   "outputs": [],
   "source": [
    "def print_most_funcs(df):\n",
    "    df = df.groupby(['Name'])['time.inc'].sum().reset_index(name='Time').sort_values(['Time'], ascending=False)\n",
    "    display(df.head())"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 39,
   "id": "88513f08",
   "metadata": {},
   "outputs": [
    {
     "data": {
      "text/html": [
       "<div>\n",
       "<style scoped>\n",
       "    .dataframe tbody tr th:only-of-type {\n",
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       "\n",
       "    .dataframe tbody tr th {\n",
       "        vertical-align: top;\n",
       "    }\n",
       "\n",
       "    .dataframe thead th {\n",
       "        text-align: right;\n",
       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>Name</th>\n",
       "      <th>Time</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>15</th>\n",
       "      <td>SweepSolver</td>\n",
       "      <td>3.631926e+08</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>MPI_Isend</td>\n",
       "      <td>3.002905e+08</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>MPI_Testany</td>\n",
       "      <td>3.306566e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>17</th>\n",
       "      <td>time-loop</td>\n",
       "      <td>2.726991e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>16</th>\n",
       "      <td>population</td>\n",
       "      <td>1.461140e+06</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "           Name          Time\n",
       "15  SweepSolver  3.631926e+08\n",
       "3     MPI_Isend  3.002905e+08\n",
       "4   MPI_Testany  3.306566e+07\n",
       "17    time-loop  2.726991e+07\n",
       "16   population  1.461140e+06"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "data": {
      "text/html": [
       "<div>\n",
       "<style scoped>\n",
       "    .dataframe tbody tr th:only-of-type {\n",
       "        vertical-align: middle;\n",
       "    }\n",
       "\n",
       "    .dataframe tbody tr th {\n",
       "        vertical-align: top;\n",
       "    }\n",
       "\n",
       "    .dataframe thead th {\n",
       "        text-align: right;\n",
       "    }\n",
       "</style>\n",
       "<table border=\"1\" class=\"dataframe\">\n",
       "  <thead>\n",
       "    <tr style=\"text-align: right;\">\n",
       "      <th></th>\n",
       "      <th>Name</th>\n",
       "      <th>Time</th>\n",
       "    </tr>\n",
       "  </thead>\n",
       "  <tbody>\n",
       "    <tr>\n",
       "      <th>15</th>\n",
       "      <td>SweepSolver</td>\n",
       "      <td>3.451925e+08</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>3</th>\n",
       "      <td>MPI_Isend</td>\n",
       "      <td>1.487963e+08</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>4</th>\n",
       "      <td>MPI_Testany</td>\n",
       "      <td>1.106843e+08</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>17</th>\n",
       "      <td>time-loop</td>\n",
       "      <td>2.727095e+07</td>\n",
       "    </tr>\n",
       "    <tr>\n",
       "      <th>16</th>\n",
       "      <td>population</td>\n",
       "      <td>2.043878e+07</td>\n",
       "    </tr>\n",
       "  </tbody>\n",
       "</table>\n",
       "</div>"
      ],
      "text/plain": [
       "           Name          Time\n",
       "15  SweepSolver  3.451925e+08\n",
       "3     MPI_Isend  1.487963e+08\n",
       "4   MPI_Testany  1.106843e+08\n",
       "17    time-loop  2.727095e+07\n",
       "16   population  2.043878e+07"
      ]
     },
     "metadata": {},
     "output_type": "display_data"
    },
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "ERROR:bokeh.server.protocol_handler:error handling message\n",
      " message: Message 'PATCH-DOC' content: {'events': [{'kind': 'MessageSent', 'msg_type': 'bokeh_event', 'msg_data': {'event_name': 'rangesupdate', 'event_values': {'x0': 1829939745.9686708, 'x1': 1912248347.4317908, 'y0': 31.5, 'y1': -0.5}}}], 'references': []} \n",
      " error: NotImplementedError('Unexpected dshape <function dshape at 0x28cad3ca0>')\n",
      "Traceback (most recent call last):\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/protocol_handler.py\", line 97, in handle\n",
      "    work = await handler(message, connection)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/session.py\", line 95, in _needs_document_lock_wrapper\n",
      "    result = func(self, *args, **kwargs)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/session.py\", line 289, in _handle_patch\n",
      "    message.apply_to_document(self.document, self)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/protocol/messages/patch_doc.py\", line 115, in apply_to_document\n",
      "    invoke_with_curdoc(doc, lambda: doc.apply_json_patch(self.content, setter))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 408, in invoke_with_curdoc\n",
      "    return f()\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/protocol/messages/patch_doc.py\", line 115, in <lambda>\n",
      "    invoke_with_curdoc(doc, lambda: doc.apply_json_patch(self.content, setter))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/document.py\", line 391, in apply_json_patch\n",
      "    DocumentPatchedEvent.handle_json(self, event_json, references, setter)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/events.py\", line 259, in handle_json\n",
      "    handler(doc, event_json, references, setter)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/events.py\", line 300, in _handle_json\n",
      "    cb(event_json[\"msg_data\"])\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 355, in trigger_json_event\n",
      "    model._trigger_event(event)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/util/callback_manager.py\", line 119, in _trigger_event\n",
      "    self.document.callbacks.notify_event(cast(Model, self), event, invoke)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 247, in notify_event\n",
      "    invoke_with_curdoc(doc, callback_invoker)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/document/callbacks.py\", line 408, in invoke_with_curdoc\n",
      "    return f()\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/util/callback_manager.py\", line 115, in invoke\n",
      "    cast(EventCallbackWithEvent, callback)(event)\n",
      "  File \"/Users/movsesyanae/Programming/Research/pipit/pipit/plotting/core.py\", line 201, in update_cds\n",
      "    agg = cvs.points(small, x=\"Timestamp (ns)\", y=\"y\", agg=ds.count_cat(\"Name\"))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/core.py\", line 219, in points\n",
      "    return bypixel(source, self, glyph, agg)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/core.py\", line 1260, in bypixel\n",
      "    return bypixel.pipeline(source, schema, canvas, glyph, agg, antialias=antialias)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/utils.py\", line 109, in __call__\n",
      "    return lk[typ](head, *rest, **kwargs)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/data_libraries/pandas.py\", line 17, in pandas_pipeline\n",
      "    return glyph_dispatch(glyph, df, schema, canvas, summary, antialias=antialias)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/utils.py\", line 112, in __call__\n",
      "    return lk[cls](head, *rest, **kwargs)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/data_libraries/pandas.py\", line 46, in default\n",
      "    bases = create((height, width))\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/compiler.py\", line 126, in <lambda>\n",
      "    return lambda shape: tuple(c(shape, array_module) for c in creators)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/compiler.py\", line 126, in <genexpr>\n",
      "    return lambda shape: tuple(c(shape, array_module) for c in creators)\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/reductions.py\", line 604, in <lambda>\n",
      "    return lambda shape, array_module: self.reduction._build_create(\n",
      "  File \"/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/datashader/reductions.py\", line 305, in _build_create\n",
      "    raise NotImplementedError(f\"Unexpected dshape {dshape}\")\n",
      "NotImplementedError: Unexpected dshape <function dshape at 0x28cad3ca0>\n",
      "/Users/movsesyanae/miniconda3/envs/pipit_env/lib/python3.9/site-packages/bokeh/server/protocol_handler.py:101: RuntimeWarning: coroutine 'WSHandler.send_message' was never awaited\n",
      "  work = connection.error(message, repr(e))\n"
     ]
    }
   ],
   "source": [
    "print_most_funcs(most_idle)\n",
    "print_most_funcs(least_idle)"
   ]
  }
 ],
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