diff --git a/docker/Dockerfile b/docker/Dockerfile index 4f8d9c92..5a122838 100644 --- a/docker/Dockerfile +++ b/docker/Dockerfile @@ -9,7 +9,7 @@ RUN conda install pytorch==1.10.0 torchvision torchaudio cudatoolkit=11.3 -c pyt && conda install hmmer==3.3.2 hhsuite=3.3.0 kalign2=2.04 -c bioconda RUN pip install biopython==1.79 dm-tree==0.1.6 ml-collections==0.1.0 numpy==1.21.2 \ - PyYAML==5.4.1 requests==2.26.0 scipy==1.7.1 tqdm==4.62.2 typing-extensions==3.10.0.2 einops ray==1.13.0 pyarrow + PyYAML==5.4.1 requests==2.26.0 scipy==1.7.1 tqdm==4.62.2 typing-extensions==3.10.0.2 einops ray pyarrow RUN pip install colossalai==0.1.8+torch1.10cu11.3 -f https://release.colossalai.org