scmapCell error

[yuqiyuqitan]

Hi,

I am running into a nearest neighbor computing error when running scmapCell function. Have you seen similar errors? What are some steps that I can take to resolve it?

Best
Yuqi

`sessionInfo()
R version 3.6.1 (2019-07-05)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS Mojave 10.14.6

Matrix products: default
BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libRlapack.dylib

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] parallel stats4 stats graphics grDevices utils datasets methods base

other attached packages:
[1] SingleCellExperiment_1.6.0 SummarizedExperiment_1.14.1 DelayedArray_0.10.0 BiocParallel_1.18.1 matrixStats_0.55.0
[6] Biobase_2.44.0 GenomicRanges_1.36.1 GenomeInfoDb_1.20.0 IRanges_2.18.3 S4Vectors_0.22.1
[11] BiocGenerics_0.30.0 scmap_1.6.0 singleCellNet_0.1.0 cowplot_1.0.0 reshape2_1.4.3
[16] pheatmap_1.0.12 dplyr_0.8.3 ggplot2_3.2.1

loaded via a namespace (and not attached):
[1] tidyselect_0.2.5 purrr_0.3.3 lattice_0.20-38 expm_0.999-4 colorspace_1.4-1 yaml_2.2.0 rlang_0.4.2
[8] e1071_1.7-3 pillar_1.4.3 glue_1.3.1 withr_2.1.2 RColorBrewer_1.1-2 GenomeInfoDbData_1.2.1 lifecycle_0.1.0
[15] plyr_1.8.5 stringr_1.4.0 zlibbioc_1.30.0 munsell_0.5.0 gtable_0.3.0 mvtnorm_1.0-11 codetools_0.2-16
[22] class_7.3-15 Rcpp_1.0.3 scales_1.1.0 jsonlite_1.6 XVector_0.24.0 googleVis_0.6.4 stringi_1.4.3
[29] grid_3.6.1 tools_3.6.1 bitops_1.0-6 DescTools_0.99.31 magrittr_1.5 proxy_0.4-23 lazyeval_0.2.2
[36] RCurl_1.95-4.12 tibble_2.1.3 randomForest_4.6-14 crayon_1.3.4 pkgconfig_2.0.3 MASS_7.3-51.4 Matrix_1.2-18
[43] assertthat_0.2.1 rstudioapi_0.10 boot_1.3-23 R6_2.4.1 compiler_3.6.1 `

[FionaMoon]

I met this problem as well.