From b43deeeb810cd3675db04d150fc236ec0d206fc7 Mon Sep 17 00:00:00 2001 From: chiangtw Date: Mon, 4 Oct 2021 12:11:28 +0800 Subject: [PATCH] hotfix for the case of "Optimize_hard_drive == T" --- rules/Round2.smk | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/rules/Round2.smk b/rules/Round2.smk index 3a68ae0..eec16e6 100644 --- a/rules/Round2.smk +++ b/rules/Round2.smk @@ -68,9 +68,9 @@ rule download_fastq2: "download/{sample}.download.sh", "Round2/TOTAL.ME_centric.txt" params: - "FASTQ/{sample}.fastq" + "FASTQ/{sample}.fastq.gz" output: - temp("FASTQ/round2/{sample}.fastq") + temp("FASTQ/round2/{sample}.fastq.gz") priority: -10 resources: get_data = 1