You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Lacking some essential parameters should provide helpful information instead of exceptions:
19:30 $ python gtrackcore/track_operations/gtools/GTools.py import
Traceback (most recent call last):
File "gtrackcore/track_operations/gtools/GTools.py", line 201, in <module>
GTools()
File "gtrackcore/track_operations/gtools/GTools.py", line 30, in __init__
self.runOperation()
File "gtrackcore/track_operations/gtools/GTools.py", line 53, in runOperation
btrack = BTrack(self._args.btrackPath)
File "/Users/sveinugu/PycharmProjects/gtrackcore/gtrackcore/api/BTrack.py", line 15, in __init__
self._path = os.path.abspath(path)
File "/Users/sveinugu/miniconda2/lib/python2.7/posixpath.py", line 360, in abspath
if not isabs(path):
File "/Users/sveinugu/miniconda2/lib/python2.7/posixpath.py", line 54, in isabs
return s.startswith('/')
AttributeError: 'NoneType' object has no attribute 'startswith
Also, it would be prettier if such validation exceptions were only print statements, and not full exceptions with stacktrace:
python gtrackcore/track_operations/gtools/GTools.py create -b test.btrack
Traceback (most recent call last):
File "gtrackcore/track_operations/gtools/GTools.py", line 201, in <module>
GTools()
File "gtrackcore/track_operations/gtools/GTools.py", line 30, in __init__
self.runOperation()
File "gtrackcore/track_operations/gtools/GTools.py", line 47, in runOperation
BTrack(self._args.btrackPath, self._args.genomePath)
File "/Users/sveinugu/PycharmProjects/gtrackcore/gtrackcore/api/BTrack.py", line 23, in __init__
raise ValueError('Genome has to be provided')
ValueError: Genome has to be provided
The text was updated successfully, but these errors were encountered:
Lacking some essential parameters should provide helpful information instead of exceptions:
Also, it would be prettier if such validation exceptions were only print statements, and not full exceptions with stacktrace:
The text was updated successfully, but these errors were encountered: