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Identify more interesting data sets to use for the alternative splicing module #27

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kcotto opened this issue Mar 18, 2019 · 0 comments

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kcotto commented Mar 18, 2019

http://www.ncbi.nlm.nih.gov/gds/?term=rna-seq+splicing

-GSE63953
-GSE63375
-GSE63569
-GSE45119
-GSE48263
-GSE44402

Gray lab breast cancer cell line dataset:

-http://www.ncbi.nlm.nih.gov/pubmed/24176112
-https://www.biostars.org/p/111040/ (biostars tutorial on downloading data)
-https://github.com/genome/gms/wiki/Guide-to-Importing-and-Analyzing-External-Data (another guide on downloading and reformatting this data)

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