diff --git a/_posts/0009-04-01-Lectures.md b/_posts/0009-04-01-Lectures.md index cab42392..17526cd0 100644 --- a/_posts/0009-04-01-Lectures.md +++ b/_posts/0009-04-01-Lectures.md @@ -22,6 +22,25 @@ date: 0009-04-01 ### CBW RNA-seq analysis (July 17-19th, 2023. Toronto, ON, Canada)) +Organized by [Canadian Bioinformatics Workshops (CBW)](https://bioinformatics.ca/) - [Course Site](https://bioinformaticsdotca.github.io/RNA_2021) + +**Presentations:** + +* [Intructor Introductions](https://github.com/griffithlab/rnabio.org/blob/master/assets/lectures/cbw/2023/full/RNASeq_Module0_Introductions.pdf) +* [Introduction to Cloud Computing (lecture)](https://github.com/griffithlab/rnabio.org/blob/master/assets/lectures/cbw/2023/full/RNASeq_Module0_CloudComputing.pdf) +* [Introduction to RNA Sequencing (lecture)](https://github.com/griffithlab/rnabio.org/blob/master/assets/lectures/cbw/2023/full/RNASeq_Module1_IntrotoRNA.pdf) +* [Introduction to IGV (lecture)](https://github.com/griffithlab/rnabio.org/blob/master/assets/lectures/cbw/2023/full/RNASeq_Module2_IGV_Tutorial_Brief.pdf) +* [Fasta, Fastq, GTF (mini lecture)](https://github.com/griffithlab/rnabio.org/tree/master/assets/lectures/cbw/2023/mini/RNASeq_MiniLecture_01_01_FASTA_FASTQ_GTF.pdf) +* [Indexing (mini lecture)](https://github.com/griffithlab/rnabio.org/tree/master/assets/lectures/cbw/2023/mini/RNASeq_MiniLecture_01_02_Indexing.pdf) +* [Alignment (mini lecture)](https://github.com/griffithlab/rnabio.org/tree/master/assets/lectures/cbw/2023/mini/RNASeq_MiniLecture_02_01_Alignment.pdf) +* [Alignment, assembly, kmers (mini lecture)](https://github.com/griffithlab/rnabio.org/tree/master/assets/lectures/cbw/2023/mini/RNASeq_MiniLecture_02_02_Alignment_vs_Assembly_vs_Kmer.pdf) +* [SAM, BAM, BED (mini lecture)](https://github.com/griffithlab/rnabio.org/tree/master/assets/lectures/cbw/2023/mini/RNASeq_MiniLecture_02_03_SAM_BAM_BED.pdf) +* [Alignment QC (mini lecture)](https://github.com/griffithlab/rnabio.org/tree/master/assets/lectures/cbw/2023/mini/RNASeq_MiniLecture_02_04_alignmentQC.pdf) +* [Abundance Estimation (mini lecture)](https://github.com/griffithlab/rnabio.org/tree/master/assets/lectures/cbw/2023/mini/RNASeq_MiniLecture_03_01_AbundanceEstimation.pdf) +* [HTSeq (mini lecture)](https://github.com/griffithlab/rnabio.org/blob/master/assets/lectures/cbw/2023/mini/RNASeq_MiniLecture_03_02_HTSEQ.pdf) +* [Differential expression (mini lecture)](https://github.com/griffithlab/rnabio.org/tree/master/assets/lectures/cbw/2023/mini/RNASeq_MiniLecture_03_03_DifferentialExpression.pdf) +* [Alignment free analysis with Kallisto (mini lecture)](https://github.com/griffithlab/rnabio.org/tree/master/assets/lectures/cbw/2023/mini/RNASeq_MiniLecture_04_01_AlignmentFreeKallisto.pdf) +* [Alternative expression (mini lecture)](https://github.com/griffithlab/rnabio.org/tree/master/assets/lectures/cbw/2023/mini/RNASeq_MiniLecture_05_01_AlternativeSplicingAnalysis.pdf) ### Advanced Sequencing Technologies & Bioinformatics Analysis (November 7-19, 2022)