diff --git a/pvactools/tools/pvacseq/iedb_alleles/class_i/netmhcpan.tsv b/pvactools/tools/pvacseq/iedb_alleles/class_i/netmhcpan.tsv index 92b71b1c..808172eb 100644 --- a/pvactools/tools/pvacseq/iedb_alleles/class_i/netmhcpan.tsv +++ b/pvactools/tools/pvacseq/iedb_alleles/class_i/netmhcpan.tsv @@ -25073,3 +25073,24 @@ cow BoLA-T7 11 cow BoLA-T7 12 cow BoLA-T7 13 cow BoLA-T7 14 +dog DLA-8803401 8 +dog DLA-8803401 9 +dog DLA-8803401 10 +dog DLA-8803401 11 +dog DLA-8803401 12 +dog DLA-8803401 13 +dog DLA-8803401 14 +dog DLA-8850101 8 +dog DLA-8850101 9 +dog DLA-8850101 10 +dog DLA-8850101 11 +dog DLA-8850101 12 +dog DLA-8850101 13 +dog DLA-8850101 14 +dog DLA-8850801 8 +dog DLA-8850801 9 +dog DLA-8850801 10 +dog DLA-8850801 11 +dog DLA-8850801 12 +dog DLA-8850801 13 +dog DLA-8850801 14 diff --git a/pvactools/tools/pvacseq/iedb_alleles/class_i/netmhcpan_el.tsv b/pvactools/tools/pvacseq/iedb_alleles/class_i/netmhcpan_el.tsv index 92b71b1c..808172eb 100644 --- a/pvactools/tools/pvacseq/iedb_alleles/class_i/netmhcpan_el.tsv +++ b/pvactools/tools/pvacseq/iedb_alleles/class_i/netmhcpan_el.tsv @@ -25073,3 +25073,24 @@ cow BoLA-T7 11 cow BoLA-T7 12 cow BoLA-T7 13 cow BoLA-T7 14 +dog DLA-8803401 8 +dog DLA-8803401 9 +dog DLA-8803401 10 +dog DLA-8803401 11 +dog DLA-8803401 12 +dog DLA-8803401 13 +dog DLA-8803401 14 +dog DLA-8850101 8 +dog DLA-8850101 9 +dog DLA-8850101 10 +dog DLA-8850101 11 +dog DLA-8850101 12 +dog DLA-8850101 13 +dog DLA-8850101 14 +dog DLA-8850801 8 +dog DLA-8850801 9 +dog DLA-8850801 10 +dog DLA-8850801 11 +dog DLA-8850801 12 +dog DLA-8850801 13 +dog DLA-8850801 14 diff --git a/pvactools/tools/pvacseq/iedb_alleles/class_ii/NetMHCIIpan.tsv b/pvactools/tools/pvacseq/iedb_alleles/class_ii/NetMHCIIpan.tsv index a77362ca..382bec70 100644 --- a/pvactools/tools/pvacseq/iedb_alleles/class_ii/NetMHCIIpan.tsv +++ b/pvactools/tools/pvacseq/iedb_alleles/class_ii/NetMHCIIpan.tsv @@ -5620,3 +5620,8 @@ DRB5*02:04 DRB5*02:05 H2-IAb H2-IAd +H2-IAk +H2-IAs +H2-IAu +H2-IEd +H2-IEk diff --git a/pvactools/tools/pvacseq/iedb_alleles/class_ii/netmhciipan_el.tsv b/pvactools/tools/pvacseq/iedb_alleles/class_ii/netmhciipan_el.tsv index a77362ca..382bec70 100644 --- a/pvactools/tools/pvacseq/iedb_alleles/class_ii/netmhciipan_el.tsv +++ b/pvactools/tools/pvacseq/iedb_alleles/class_ii/netmhciipan_el.tsv @@ -5620,3 +5620,8 @@ DRB5*02:04 DRB5*02:05 H2-IAb H2-IAd +H2-IAk +H2-IAs +H2-IAu +H2-IEd +H2-IEk diff --git a/pvactools/tools/pvacseq/iedb_alleles/class_ii/nn_align.tsv b/pvactools/tools/pvacseq/iedb_alleles/class_ii/nn_align.tsv index 46af71ad..14133978 100644 --- a/pvactools/tools/pvacseq/iedb_alleles/class_ii/nn_align.tsv +++ b/pvactools/tools/pvacseq/iedb_alleles/class_ii/nn_align.tsv @@ -1,27 +1,62 @@ DPA1*01-DPB1*04:01 DPA1*01:03-DPB1*02:01 +DPA1*01:03-DPB1*03:01 +DPA1*01:03-DPB1*04:01 +DPA1*01:03-DPB1*04:02 +DPA1*01:03-DPB1*06:01 DPA1*02:01-DPB1*01:01 DPA1*02:01-DPB1*05:01 +DPA1*02:01-DPB1*14:01 DPA1*03:01-DPB1*04:02 DQA1*01:01-DQB1*05:01 +DQA1*01:02-DQB1*05:01 +DQA1*01:02-DQB1*05:02 DQA1*01:02-DQB1*06:02 +DQA1*01:03-DQB1*06:03 +DQA1*01:04-DQB1*05:03 +DQA1*02:01-DQB1*02:02 +DQA1*02:01-DQB1*03:01 +DQA1*02:01-DQB1*03:03 +DQA1*02:01-DQB1*04:02 +DQA1*03:01-DQB1*03:01 DQA1*03:01-DQB1*03:02 +DQA1*03:03-DQB1*04:02 DQA1*04:01-DQB1*04:02 DQA1*05:01-DQB1*02:01 DQA1*05:01-DQB1*03:01 +DQA1*05:01-DQB1*03:02 +DQA1*05:01-DQB1*03:03 +DQA1*05:01-DQB1*04:02 +DQA1*06:01-DQB1*04:02 DRB1*01:01 +DRB1*01:03 DRB1*03:01 DRB1*04:01 +DRB1*04:02 +DRB1*04:03 DRB1*04:04 DRB1*04:05 DRB1*07:01 +DRB1*08:01 DRB1*08:02 DRB1*09:01 +DRB1*10:01 DRB1*11:01 +DRB1*12:01 +DRB1*13:01 DRB1*13:02 DRB1*15:01 +DRB1*16:02 DRB3*01:01 +DRB3*02:02 +DRB3*03:01 DRB4*01:01 +DRB4*01:03 DRB5*01:01 H2-IAb H2-IAd +H2-IAk +H2-IAs +H2-IAu +H2-IEd +H2-IEk