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Releases: griffithlab/civic-v2

v2.2.7

22 Feb 18:18
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What's Changed

🐛 Bug Fixes

  • Handle cases where none of the allele registry transcripts are tagged as MANE select by @susannasiebert in #754
  • Handle revision popover for revisions without creation comment by @susannasiebert in #746
  • Long evidence and assertion descriptons will overflow into scroll by @acoffman in #751

Full Changelog: v2.2.6...v2.2.7

v2.2.6

16 Feb 19:54
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What's Changed

🐛 Bug Fixes

Full Changelog: v2.2.5...v2.2.6

v2.2.5

16 Feb 19:29
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What's Changed

🚀 New Features

🎉 Enhancements to Existing Features

🐛 Bug Fixes

Full Changelog: v2.2.4...v2.2.5

v2.2.4

07 Feb 16:10
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What's Changed

🎉 Enhancements to Existing Features

  • show OpenCRAVAT url on MP page Variant cards by @acoffman in #732

🐛 Bug Fixes

  • Don't fuzzy match MP names in the MP menu by @acoffman in #733
  • Fix guideline version not being picked up in assertion revisions

🧹 Housekeeping

  • display molecular profile count on more popovers and tables by @acoffman in #727

Full Changelog: v2.2.3...v2.2.4

v2.2.3

27 Jan 16:55
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What's Changed

🚀 New Features

  • Link out to OpenCRAVAT variant report on CIViC variant pages when an Allele Registry ID is present.

Full Changelog: v2.2.2...v2.2.3

v2.2.2

25 Jan 15:35
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What's Changed

🐛 Bug Fixes

  • Fix a few more places where we were using the eid -> variant association by @susannasiebert in #722

Full Changelog: v2.2.1...v2.2.2

v2.2.1

24 Jan 22:42
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What's Changed

🎉 Enhancements to Existing Features

  • Scrape abstract text for ASH sources by @acoffman in #702
  • Browse table updates by @acoffman in #703
  • Update materialized views to use MP connections and remove variant_id and gene_id tables on eids and assertions by @susannasiebert in #706
  • Show all MPs unless deprecated in browse views. Show all sources in Source browse view by @acoffman in #707
  • Add Variant Type filtering and configurable page sizes to Variant Menu by @acoffman in #718

🐛 Bug Fixes

🧹 Housekeeping

Full Changelog: v2.2.0...v2.2.1

v.2.2.0

09 Jan 21:28
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What's Changed

🧨 Breaking Changes

We aim to roll out breaking changes as infrequently as possible to our users. As such this release bundles several breaking changes to be aware of, all at once.

  • Evidence Items and Assertions are no longer attached to Variants. They are attached to the new Molecular Profile concept.
  • The Clinical Significance Field has been renamed to Significance.
  • Drugs are now referred to as Therapies, and Drug Interaction Type is now Therapy Interaction Type. As a result, Evidence Items and Assertions are linked to Therapies instead of Drugs.
  • Variant Description, Sources, and Evidence Score have been moved from Variants to Molecular Profiles

🚀 New Features

🎉 Enhancements to Existing Features

  • updated evidence, assertion tag status styles by @jmcmichael in #579
  • updated tag status styles, new icon badges by @jmcmichael in #583
  • add badges to entity icons by @jmcmichael in #587
  • provides evidenceLevelBrief option for evidenceEnumTooltip pipe by @jmcmichael in #595
  • Clicking a revision tag takes you to the the revision set regardless of status by @acoffman in #606
  • Allow admins to set a parent organization when editing orgs in the admin UI by @acoffman in #610
  • Add missing clinical trial links to source and eid summary gql by @susannasiebert in #616
  • Add alert banner to rejected evidence and assertion summary pages by @susannasiebert in #618
  • Make source tags on Source Suggestions table linkable by @acoffman in #617
  • Give the user feedback when no new revisions are created by @acoffman in #613
  • Provide user feedback when proposed revisions would have resulted in duplicates. by @acoffman in #639
  • Link out to OpenCRAVAT from variant pages where possible. by @acoffman in #637

🐛 Bug Fixes

🧹 Housekeeping

  • removes entity table title icons, entity icons in col headers switched to monochrome by @jmcmichael in #592
  • Author list improvements for sources by @acoffman in #604
  • build client when tests are run by @acoffman in #612
  • Remove "Does Not Support" option for Predisposing and Oncogenic Assertions by @acoffman in #636
  • Rename myvariant.info CADD tab to "Conservation Analysis Tools" by @susannasiebert in #643
  • Rename various fields (including drug->therapy), additional MP fixes by @acoffman in #675
  • Rename CIViC Evidence Score to Molecular Profile Score by @acoffman in #684
  • Remove sources from variants in gql schema by @acoffman in #690

Other Changes

Full Changelog: v2.1.2...v2.2.0

v2.1.2

20 Dec 15:19
ae0326d
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Other Changes

  • Adds GCBR inclusion announcement to Welcome page news feed by @jmcmichael in #683

Full Changelog: v2.1.1...v2.1.2

v2.1.1

29 Sep 17:53
5973ad9
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What's Changed

🎉 Enhancements to Existing Features

  • You may now reject an EID without it having to pass data model validiation
  • News item for ITCR elevator pitch added

🐛 Bug Fixes

  • Missing Icons for new EID/Assertion Types fixed
  • Fixed browse tables appearing to hang when navigating back and forth
  • Org members tab loads now
  • Data releases page loads on first visit
  • Event feed filters fixed
  • Event feed "new events" refresh fixed

Full Changelog: v2.1.0...v2.1.1