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To adhere to new guidelines for naming of RNA fusion variants we would like CIViC bot to propose suggested changes for the attached variants.
variants-2022-02-17.xlsx
For each variant in this spreadsheet (CIViC variant ID in column A), create a new variant alias using the current variant name (column B).
At the same time, propose a change to the variant name where - becomes ::.
-
::
For example, fusion variant: ACTB-GLI1 becomes ACTB::GLI1
ACTB-GLI1
ACTB::GLI1
The text was updated successfully, but these errors were encountered:
CIViC bot should also do a second (separate) suggested change that adds the Sequence ontology term transcript fusion (SO:0001886) as a variant type.
transcript fusion
SO:0001886
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https://gist.github.com/acoffman/320d2a142278cb93fb2eba11a6fa9351
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To adhere to new guidelines for naming of RNA fusion variants we would like CIViC bot to propose suggested changes for the attached variants.
variants-2022-02-17.xlsx
For each variant in this spreadsheet (CIViC variant ID in column A), create a new variant alias using the current variant name (column B).
At the same time, propose a change to the variant name where
-
becomes::
.For example, fusion variant:
ACTB-GLI1
becomesACTB::GLI1
The text was updated successfully, but these errors were encountered: