cannot load GFA from vg or seqwish

[ekg]

I'm running into a problem when I try to load this file. It's simple GFAv1 from seqwish.

Error opening file "/home/erik/seqwish/test/DRB1-3123.fa.gfa": Line 19168, column 1: Invalid label 'gi|568815592:32578768-32589835 '.

I changed the label for the path in many ways but didn't manage to load it. Does gfaviz not support paths?

DRB1-3123.fa.gfa.zip

[ggonnella]

It does support paths.

The problem is the space after the label, before the tab. If you take it away, it will open it correctly.

[ggonnella]

I did this, as this is what the GFA specification says. If you think this is an issue that can't be fixed in existing implementations (vg/seqwish), I can relax the validation, though.