diff --git a/.github/workflows/relation-diff.yml b/.github/workflows/relation-diff.yml index 503f4f3821..064d071cc1 100644 --- a/.github/workflows/relation-diff.yml +++ b/.github/workflows/relation-diff.yml @@ -10,7 +10,7 @@ jobs: steps: - uses: actions/checkout@v3 - name: Run relation-graph - run: cd src/ontology; ROBOT_JAVA_ARGS=-Xmx6G robot merge --catalog catalog-v001.xml -i go-edit.obo -o go-merged.ofn; JAVA_OPTS=-Xmx6G relation-graph --ontology-file go-merged.ofn --mode RDF --output-file go-rels.nt --output-subclasses true --reflexive-subclasses false --equivalence-as-subclass false; sed 's/ /\t/' right.facts + run: cd src/ontology; ROBOT_JAVA_ARGS=-Xmx6G robot merge --catalog catalog-v001.xml -i go-edit.obo -o go-merged.ofn; JAVA_OPTS=-Xmx6G relation-graph --ontology-file go-merged.ofn --mode RDF --output-file go-rels.nt --output-subclasses true --reflexive-subclasses false --equivalence-as-subclass false; sed 's/ /\t/' right.facts - name: Upload PR facts uses: actions/upload-artifact@v2 with: @@ -25,7 +25,7 @@ jobs: with: ref: master - name: Run relation-graph - run: cd src/ontology; ROBOT_JAVA_ARGS=-Xmx6G robot merge --catalog catalog-v001.xml -i go-edit.obo -o go-merged.ofn; JAVA_OPTS=-Xmx6G relation-graph --ontology-file go-merged.ofn --mode RDF --output-file go-rels.nt --output-subclasses true --reflexive-subclasses false --equivalence-as-subclass false; sed 's/ /\t/' left.facts + run: cd src/ontology; ROBOT_JAVA_ARGS=-Xmx6G robot merge --catalog catalog-v001.xml -i go-edit.obo -o go-merged.ofn; JAVA_OPTS=-Xmx6G relation-graph --ontology-file go-merged.ofn --mode RDF --output-file go-rels.nt --output-subclasses true --reflexive-subclasses false --equivalence-as-subclass false; sed 's/ /\t/' left.facts - name: Upload PR facts uses: actions/upload-artifact@v2 with: