From 5aaafa6c3d0f2626d0a330339100943ebe1799bc Mon Sep 17 00:00:00 2001 From: gbouras13 Date: Sun, 22 Oct 2023 14:09:16 +1030 Subject: [PATCH] fix flye dir tests format --- src/plassembler/__init__.py | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/src/plassembler/__init__.py b/src/plassembler/__init__.py index efba8c4..48ebb71 100644 --- a/src/plassembler/__init__.py +++ b/src/plassembler/__init__.py @@ -1199,7 +1199,7 @@ def long( if pacbio_model != "nothing": pacbio_model = validate_pacbio_model(pacbio_model) - # check error rate + # check error rate try: float(corrected_error_rate) > 0 @@ -1343,7 +1343,6 @@ def long( canu_nano_or_pacbio = "nanopore" # corrected error rate default will be 0.12 - if canu_flag is True: assembler = "canu" logger.info("Running canu to recover plasmids.")