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While using --genbank Pharokka still counts from 0 instead of 1 #353

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konstytucja opened this issue Jul 15, 2024 · 0 comments
Open

While using --genbank Pharokka still counts from 0 instead of 1 #353

konstytucja opened this issue Jul 15, 2024 · 0 comments

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@konstytucja
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  • pharokka version:1.7.3
  • Python version:3.10.14
  • Operating System: Debian GNU/Linux 10

Description

I am using pharokka to annotate a GenBank (gbk) file that I have. However, I noticed that the start positions in the annotation results are counted from 0 instead of 1, which is different from the start positions when using a FASTA file with pharokka.

What I Did

I used pharokka on fasta file and according genbank file (I adeed --genbank flag) and got different results.

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