NAMESPACE

export("fis<-")
export("genes<-")
export("modules<-")
export(HotNet)
export(ReactomeFINetwork)
export(ReactomeFIService)
export(annotate)
export(annotateModules)
export(build)
export(buildCytoscapeGraph)
export(cluster)
export(fis)
export(genes)
export(modules)
export(service)
export(subnet)
exportMethods(plot)
import(RCurl)
import(XML)
import(ggplot2)
import(methods)
importFrom(plyr,.)
importFrom(plyr,ddply)
importFrom(sna,gplot.layout.adj)
importFrom(sna,gplot.layout.circle)
importFrom(sna,gplot.layout.circrand)
importFrom(sna,gplot.layout.eigen)
importFrom(sna,gplot.layout.fruchtermanreingold)
importFrom(sna,gplot.layout.geodist)
importFrom(sna,gplot.layout.hall)
importFrom(sna,gplot.layout.kamadakawai)
importFrom(sna,gplot.layout.mds)
importFrom(sna,gplot.layout.princoord)
importFrom(sna,gplot.layout.random)
importFrom(sna,gplot.layout.rmds)
importFrom(sna,gplot.layout.segeo)
importFrom(sna,gplot.layout.seham)
importFrom(sna,gplot.layout.spring)
importFrom(sna,gplot.layout.springrepulse)
importFrom(sna,gplot.layout.target)