diff --git a/tests/api/test_picking.py b/tests/api/test_picking.py index 4b4f57f..012b804 100644 --- a/tests/api/test_picking.py +++ b/tests/api/test_picking.py @@ -10,21 +10,21 @@ import pytest from fgpyo.sequence import reverse_complement +from prymer.api import FilteringParams +from prymer.api import MinOptMax +from prymer.api import Primer +from prymer.api import PrimerPair +from prymer.api import Span +from prymer.api import Strand +from prymer.api import build_and_pick_primer_pairs +from prymer.api import build_primer_pairs +from prymer.api import pick_top_primer_pairs from prymer.api.melting import calculate_long_seq_tm -from prymer.api.minoptmax import MinOptMax -from prymer.api.picking import FilteringParams from prymer.api.picking import _dist_penalty from prymer.api.picking import _seq_penalty -from prymer.api.picking import build_and_pick_primer_pairs -from prymer.api.picking import build_primer_pairs from prymer.api.picking import check_primer_overlap from prymer.api.picking import is_acceptable_primer_pair -from prymer.api.picking import pick_top_primer_pairs from prymer.api.picking import score as picking_score -from prymer.api.primer import Primer -from prymer.api.primer_pair import PrimerPair -from prymer.api.span import Span -from prymer.api.span import Strand from prymer.ntthal import NtThermoAlign from prymer.offtarget import OffTargetDetector diff --git a/tests/offtarget/test_offtarget.py b/tests/offtarget/test_offtarget.py index 7da5ac7..aabd2c2 100644 --- a/tests/offtarget/test_offtarget.py +++ b/tests/offtarget/test_offtarget.py @@ -4,14 +4,14 @@ import pytest from fgpyo.sam import Cigar -from prymer.api.primer import Primer -from prymer.api.primer_pair import PrimerPair -from prymer.api.span import Span -from prymer.api.span import Strand +from prymer.api import Primer +from prymer.api import PrimerPair +from prymer.api import Span +from prymer.api import Strand +from prymer.offtarget import BwaHit +from prymer.offtarget import BwaResult from prymer.offtarget import OffTargetDetector from prymer.offtarget import OffTargetResult -from prymer.offtarget.bwa import BwaHit -from prymer.offtarget.bwa import BwaResult def _build_detector(