From aa25b1a4f635bae796b809de253b820cf490bca9 Mon Sep 17 00:00:00 2001
From: Tillsa <till.sauerwein@web.de>
Date: Mon, 9 Oct 2023 18:10:13 +0200
Subject: [PATCH] Updated conda meta file and release instructions in Makefile

---
 Makefile                            |  6 +++-
 conda_package/reademption/meta.yaml |  7 ++--
 reademption/meta.yaml               | 51 -----------------------------
 3 files changed, 8 insertions(+), 56 deletions(-)
 delete mode 100644 reademption/meta.yaml

diff --git a/Makefile b/Makefile
index ae68848..6fcf336 100644
--- a/Makefile
+++ b/Makefile
@@ -93,8 +93,12 @@ new_release:
 	@echo "If the automatic update did not work go to read the docs"
 	      " -  login and hit 'build'"
 	@echo "*create conda package"
+	@echo "*remove the old yaml file in reademption/meta.yaml"
+	@echo "rm reademption/meta.yaml"
 	@echo "conda skeleton pypi reademption"
-	@echo "replace yaml file from reademption with the one in folder conda_package/reademption"
+	@echo "*replace yaml file from reademption with the one in folder conda_package/reademption"
+	@echo "mv reademption/meta.yaml conda_package/reademption/meta.yaml"
+	@ echo "To avoid connection error while building the package got to pypi reademption page and copy the download link under Downloaded files for READemption-2.0.4.tar.gz and paste it into conda_package/reademption/meta.yaml under url"
 	@echo "conda-build --python 3.9 conda_package/reademption"
 	@echo "if necessary install anaconda client"
 	@echo " conda install anaconda-client"
diff --git a/conda_package/reademption/meta.yaml b/conda_package/reademption/meta.yaml
index 7fcb923..bd0f39f 100644
--- a/conda_package/reademption/meta.yaml
+++ b/conda_package/reademption/meta.yaml
@@ -1,14 +1,13 @@
 {% set name = "reademption" %}
-{% set version = "2.0.3" %}
+{% set version = "2.0.4" %}
 
 package:
   name: "{{ name|lower }}"
   version: "{{ version }}"
 
 source:
-  #url: "https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.tar.gz"
-  url: "https://files.pythonhosted.org/packages/e5/84/1705e6e2e85a47989ea1751dddca5c571e416f5a4fb8eb7d4bd0dd9860b3/READemption-2.0.3.tar.gz"
-  sha256: 51efda9a2b7d81facae07c6787266458e7c7ebfde5aaaf14d8538253231fc3b7
+  url: "https://files.pythonhosted.org/packages/f4/59/07ef707b9b3bf9e7d392b7c09508f37037990fa9ae22b473149269ff11d3/READemption-2.0.4.tar.gz"
+  sha256: e6ceb39a01b289e89b6d7cebd79ffb5b09679fd9255c621fc6e33450afb96345
 
 build:
   number: 0
diff --git a/reademption/meta.yaml b/reademption/meta.yaml
deleted file mode 100644
index 782edef..0000000
--- a/reademption/meta.yaml
+++ /dev/null
@@ -1,51 +0,0 @@
-{% set name = "reademption" %}
-{% set version = "2.0.2" %}
-
-package:
-  name: "{{ name|lower }}"
-  version: "{{ version }}"
-
-source:
-  url: "https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.tar.gz"
-  sha256: 8a7e96f4795561d4f5b36df277d0a93ca2a5666e1fc2b886ac714b922235a9a3
-
-build:
-  number: 0
-  script: "{{ PYTHON }} -m pip install . -vv"
-
-requirements:
-  host:
-    - biopython >=1.79
-    - matplotlib >=3.5.2
-    - pandas >=1.4.3
-    - pip
-    - pysam >=0.19.1
-    - python
-    - seaborn >=0.11.2
-    - sphinx-argparse >=0.2.5
-  run:
-    - biopython >=1.79
-    - matplotlib >=3.5.2
-    - pandas >=1.4.3
-    - pysam >=0.19.1
-    - python
-    - seaborn >=0.11.2
-    - sphinx-argparse >=0.2.5
-
-test:
-  imports:
-    - reademptionlib
-    - tests
-
-about:
-  home: The package home page
-  license: MIT
-  license_family: MIT
-  license_file: 
-  summary: "A RNA-Seq Analysis Pipeline"
-  doc_url: 
-  dev_url: 
-
-extra:
-  recipe-maintainers:
-    - your-github-id-here