New option --include-prior
to include prior representatives into the subtree output; added ability to evaluate a single prior representative.
Added a new feature that evaluates how representative a set of taxa is! The representatives for evaluation need to be indicated with the --prior
regex and they can be evaluated using the --evaluate
output option.
Added an option to save the partitioning of a tree by PARNAS to a file (see --clusters
).
Added support for Python 3.11 and other improvements.
- Bug fix: Closed Issue #1.
- Added safe guards for taxon weights: negative weights or weights exceeding 1000 are no longer allowed.