initial commit of all viz files

Author: garethcmurphy

.DS_Store

@@ -0,0 +1,93 @@
+
+!p.charsize=2
+!p.position=0
+nx = f.s.gn[0]
+nz = f.s.gn[2]
+slice= f.s.gn[1]/2
+
+bx=reform(f.bx[*,slice,*],nx,nz)
+by=reform(f.by[*,slice,*],nx,nz)
+bz=reform(f.bz[*,slice,*],nx,nz)
+ex=reform(f.ex[*,slice,*],nx,nz)
+ey=reform(f.ey[*,slice,*],nx,nz)
+ez=reform(f.ez[*,slice,*],nx,nz)
+vix=reform(f.v[*,slice,*,0,1],nx,nz)
+viy=reform(f.v[*,slice,*,1,1],nx,nz)
+viz=reform(f.v[*,slice,*,2,1],nx,nz)
+vex=reform(f.v[*,slice,*,0,0],nx,nz)
+vey=reform(f.v[*,slice,*,1,0],nx,nz)
+vez=reform(f.v[*,slice,*,2,0],nx,nz)
+
+
+loadct,0
+window, xs=1100,ys=1300
+;!p.multi=[0,3,4]
+!x.style=1
+!y.style=1
+loadct,33
+tvlct, 0,0,0,0
+tvlct, 255,255,255,1
+
+!p.background=1
+
+xx=findgen(nx)
+yy=findgen(nz)
+
+p1 = !P & x1 = !X & y1 = !Y
+
+dataptr=ptrarr(12)
+
+dataptr[0]=ptr_new(vix)
+dataptr[1]=ptr_new(viz)
+dataptr[2]=ptr_new(viy)
+dataptr[3]=ptr_new(vex)
+dataptr[4]=ptr_new(vez)
+dataptr[5]=ptr_new(vey)
+dataptr[6]=ptr_new(bx)
+dataptr[7]=ptr_new(by)
+dataptr[8]=ptr_new(bz)
+dataptr[9]=ptr_new(ex)
+dataptr[10]=ptr_new(ey)
+dataptr[11]=ptr_new(ez)
+
+pos=[0.2,0.1,0.9,0.9]
+
+titlestr=strarr(12,30)
+titlestr[0,*,*]='vix'
+titlestr[1,*]='viy'
+titlestr[2,*]='viz'
+titlestr[3,*]='vex'
+titlestr[4,*]='vey'
+titlestr[5,*]='vez'
+titlestr[6,*]='bx'
+titlestr[7,*]='by'
+titlestr[8,*]='bz'
+titlestr[9,*]='ex'
+titlestr[10,*]='ey'
+titlestr[11,*]='ez'
+
+
+
+sz=size(bx, /dimensions)
+nx=sz(0)
+ny=sz(1)
+
+xx=findgen(nx)
+yy=findgen(ny)
+
+time=f.s.time
+
+   cgDisplay, WID=1,xs=1100, ys=1100
+   cgLoadCT, 22, /Brewer, /Reverse
+   pos = cgLayout([3,4] , OXMargin=[5,5], OYMargin=[5,12], XGap=3, YGap=7)
+   FOR j=0,11 DO BEGIN
+     p = pos[*,j]
+	r=scale_vector( *dataptr(j), 1,254)
+     cgImage, r, NoErase=j NE 0, Position=p
+  cgcontour,xx#yy, xx,yy , /nodata, /noerase, xtitle='x', pos=p, title=titlestr(j), Charsize=cgDefCharsize()*0.5
+     cgColorBar, position=[p[0], p[1]-0.03, p[2], p[1]-0.02], Charsize=cgDefCharsize()*0.5
+   ENDFOR
+   cgText, 0.5, 0.96, /Normal,  'time='+string(time), Alignment=0.5, Charsize=cgDefCharsize()*1.25
+
+end
+

2

@@ -0,0 +1,4 @@
+
+function aaf, arr
+return, alog10(abs(fft(arr, /center))+1e-6)
+end

a.out

@@ -0,0 +1,27 @@
+
+
+pro alf2, br,bz,bth,vr,vz,d,p,mf,ma,ms
+va=sqrt(br^2+bz^2)/sqrt(d)
+va2=va^2
+
+vs2=((5./3.)* p /d)
+vs=sqrt(vs2)
+
+btot2 = br^2 +  bz^2 + bth^2 
+
+cfast2 = 0.5*( vs2 +btot2/d + sqrt( (vs2 +btot2/d)^2  -4.0*vs2*va2 )  )
+
+cslow2 = 0.5*( vs2 +btot2/d - sqrt( (vs2 +btot2/d)^2  -4.0*vs2*va2 )  )
+cfast=sqrt(cfast2)
+cslow=sqrt(cslow2)
+
+vpol=sqrt(vr^2 + vz^2)
+
+mf=vpol/cfast
+ma=vpol/va
+ms=vpol/cslow
+
+print, min(abs(mf)),min(mf), max(mf)
+print, min(abs(ma)),min(ma), max(ma)
+print, min(abs(ms)),min(ms), max(ms)
+end

aaf.pro

@@ -0,0 +1,21 @@
+pload, 0, dir='q01', /nodata
+nfile=50
+tptr=ptrarr(12)
+
+qarr=[0.1,0.5,0.7,0.9,1.3,1.5,1.7,1.9]
+for i=0,7 do begin
+
+dirnum=qarr[i]
+tag1=string(dirnum, format='(F4.1)')
+dirtag='q'+string(dirnum*10, format='(I02)')+'/'
+PLOAD, nfile, DIR = dirtag, /silent
+mx=bx1*bx2
+ry=rho*vx1*vx2
+
+alpha=(ry-mx)/rho^1.6666667
+alphamean=mean(alpha)
+
+print, tag1, alphamean
+endfor
+
+end

al_legend.pro

@@ -0,0 +1,84 @@
+qarr=[0.1,0.5,0.7,0.9,1.3,1.5,1.7,1.9]
+bptr=ptrarr(12)
+tptr=ptrarr(12)
+for i=0,7 do begin
+
+dirnum=qarr[i]
+dirtag='q'+string(dirnum*10, format='(I02)')+'/'
+readcol,dirtag+'alphat.txt',t,alpha
+tptr[i]=ptr_new(t)
+bptr[i]=ptr_new(alpha)
+endfor
+
+
+
+
+
+
+items=[ $
+    'q=0.1'  $
+    ,'q=0.5'  $
+    , 'q=0.7'  $
+    , 'q=0.9'  $
+    , 'q=1.3'  $
+    , 'q=1.5'  $
+    , 'q=1.7'  $
+    , 'q=1.9'  $
+    ]
+
+cl=[ $
+    'red'  $
+    , 'orange'  $
+    , 'green'  $
+    , 'blue'  $
+    , 'violet'  $
+    , 'green'  $
+    , 'red'  $
+    , 'orange'  $
+    ]
+
+ls=[2,2,2,2,0,0,0,0]
+
+cgdisplay, xs=800,ys=800
+
+fname="allalpha"
+for usingps=0,1 do begin
+if (usingps eq 1) then begin
+cgps_open, fname+'.eps', /encapsulated, /color, tt_font='Times', /quiet, font=1
+omega_str='!9W!X'
+charsize=cgdefcharsize()
+endif else  begin
+set_plot, 'x'
+omega_str='!7X!X'
+charsize=cgdefcharsize()
+endelse
+
+
+
+
+tmax=max([*tptr[0]  $     
+     ])/2/!DPI
+ymax=10*max( [ abs(*bptr[7]) ] )
+
+thick=2.
+cgplot, *tptr[0]/2./!DPI, abs(*bptr[0]), /ylog, yrange=[1e-6*ymax,ymax], color=cl[0], xrange=[0,tmax], lines=ls[0], $
+    xtitle='t, orbits', $
+    ytitle='BxBy '
+
+for i=1,7 do begin
+cgplot, *tptr[i]/2./!DPI, abs(*bptr[i]), /overplot, color=cl[i], lines=ls[i]
+endfor
+
+
+al_legend, items, lines=ls, colors=cl, $
+    pos=[60,1e-3],$
+     charsize=charsize, linsize=.25
+
+
+if ( usingps ) then begin
+cgps_close, /jpeg,  Width=1100, /nomessage, delete_ps=0
+endif else begin
+e=1
+endelse
+endfor
+end

alf2.pro

@@ -0,0 +1,134 @@
+;pload, 0, dir='q01', /nodata
+nfile=50
+tptr=ptrarr(12)
+
+nfile=189
+nstr=string(nfile, format='(I08)')
+qarr=[0.3,0.5,0.7,0.9,1.3,1.5,1.7,1.9]
+for i=0,7 do begin
+
+dirnum=qarr[i]
+dirtag='q'+string(dirnum*10, format='(I02)')
+print, dirtag
+;PLOAD, nfile, DIR = dirtag, var='bx2'
+qq=h5_parse(dirtag+'/banerbh0'+dirtag+nstr+'.h5', /read_data)
+;narr=remapfunc (bx2(*,*,0) , t[nfile], nx1,nx2,qarr[i],  x1,x2,dx2)
+tptr[i]=ptr_new(reform(qq.lumley._DATA))
+endfor
+
+
+
+items=[ $
+    'q=0.1'  $
+    , 'q=0.5'  $
+    , 'q=0.7'  $
+    , 'q=0.9'  $
+    , 'q=1.3'  $
+    , 'q=1.5'  $
+    , 'q=1.7'  $
+    , 'q=1.9'  $
+    ]
+
+cl=[ $
+    'red'  $
+    , 'orange'  $
+    , 'yellow'  $
+    , 'green'  $
+    , 'blue'  $
+    , 'violet'  $
+    , 'black'  $
+    , 'black'  $
+    ]
+
+ls=[0,1,2,3,4,5,6,7]
+
+;tmax=max([t1,t2,t3 , $     
+;    t4, t13, t15, t17,t19 ])/2/!DPI
+;1max=10*max( [ abs(bxy1) , abs(bxy2) , abs(bxy3) ] )
+
+thick=2.
+;cgplot, *tptr[0]/2./!DPI, abs(*bptr[0]), /ylog, yrange=[1e-6*ymax,ymax], color=cl[0], xrange=[0,tmax], lines=ls[0], $
+;    xtitle='t, orbits', $
+;    ytitle='BxBy '
+
+; pos=cglayout([2,4] , OXMargin=[9,1], OYMargin=[14,2], XGap=9, YGap=9)
+ pos=cglayout([4,2] , OXMargin=[13,1], OYMargin=[9,1], XGap=4, YGap=9)
+
+ xs=1200
+ ys=650
+ cgdisplay, xs=xs, ys=ys
+
+ cgloadct,33
+
+
+fname="qban"
+for usingps=0,1 do begin
+if (usingps eq 1) then begin
+cgps_open, fname+'.eps', /encapsulated, /color, tt_font='Times', /quiet, font=1
+omega_str='!9W!X'
+charsize=cgdefcharsize()*.7
+endif else  begin
+set_plot, 'x'
+omega_str='!7X!X'
+endelse
+
+
+for i=0,7 do begin
+;cgplot, *tptr[i]/2./!DPI, abs(*bptr[i]), /overplot, color=cl[i], lines=ls[i]
+px=pos[*,i]
+dat=(*tptr[i])
+tvlct, 255,255,255,0
+r=cgscalevector(dat,0,254)
+imin=min(dat)
+imax=max(dat)
+print, 'q', qarr[i], imin, imax
+cgimage, r , pos=px, /noerase
+cgcolorbar, range=[imin,imax], pos=[px[0] , px[1]-0.03, px[2],px[1]-0.02], charsize=charszie
+sz=size(dat, /dimensions)
+x=findgen(sz(0))/sz(0)*1-0.5
+y=findgen(sz(1))/sz(1)*sqrt(2.)
+cgcontour, r,x,y,  $
+    /noerase, $
+    /nodata, $
+        xticklayout=1, $
+    yticklayout=1, $
+    xtickname=REPLICATE(' ', 2),$
+    ytickname=REPLICATE(' ', 2),$
+      axiscolor='white', $
+          xticks=1,$
+    yticks=1,$
+    pos=px, $
+    charsize=charsize, $
+    ytitle='';'q='+string(qarr[i],format='(F4.1)')
+
+
+cgtext, -0.5,1.2 , "q="+string(qarr[i],format='(F4.1)')
+
+cx=findgen(250)/250*3.4-1.7
+
+
+cx2=cx ( where ( cx le 0))
+cx2=findgen(100)/100*(-.5)
+cx3=cx ( where ( cx ge 0))
+
+cgplot, cx2,  2.8*cx2+1.4, /overplot,pos=pos
+cgplot, cx3,  -2.8*cx3+1.4, /overplot, pos=pos
+cgplot, cx,  0*cx, /overplot, pos=pos, color='red'
+endfor
+
+
+if ( usingps ) then begin
+;device,/close
+cgps_close, /jpeg,  Width=2048, /nomessage, delete_ps=0
+;set_plot,'x'
+endif else begin
+;set_plot,'x'
+fname2=fname
+;im=cgsnapshot(filename=fname2,/nodialog,/jpeg)
+endelse
+
+endfor
+;al_legend, items, lines=ls, colors=cl, /right, charsize=cgdefcharsize()*1.5, linsize=.25
+
+READ_JPEG, fname+'.jpg', a, TRUE=1 & cgimage, a
+end