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"source" table not updated with add_nodes #92

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nhoffman opened this issue Mar 20, 2017 · 1 comment
Open

"source" table not updated with add_nodes #92

nhoffman opened this issue Mar 20, 2017 · 1 comment
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@nhoffman
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Entries in the csv file provided to taxit add_nodes that provide source_name and source_id do update table nodes, but does not seem to create a corresponding entry in table "source"

Also, seems like nodes.source_id needs a foreign key reference to source.id

I'm using taxit v0.5.7-65-g3963e0a

@crosenth
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Here is the code that should be updating the source table https://github.com/fhcrc/taxtastic/blob/master/taxtastic/taxonomy.py#L346-L392

Let me run some more tests to see what is actually happen.

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