DESCRIPTION

Package: metabolis
Type: Package
Title: Metabolomics Data Analysis
Version: 0.1.6
Date: 2019-05-31
Author: Etienne A. Thevenot
Maintainer: Etienne A. Thevenot <etienne.thevenot@cea.fr>
Description: This package provides methods to perform the statistical analysis
    of metabolomics datasets. These methods include the reading of datasets
    (as 3 table 'dataMatrix', 'sampleMetadata' and 'variableMetadata' .tsv files) into
    an 'ExpressionSet' object ('metRead'), quality control ('metView') and transformation 
    ('metTransform') of the dataMatrix, and univariate hypothesis testing ('metTest'). 
    Multivariate analysis and feature selection can be further performed with the 
    'ropls' and 'biosigner' packages, respectively (see the 'sacurine' vignette).
Depends:
    Biobase,
    biosigner,
    MultiDataSet,
    ropls
Imports:
    graphics,
    grDevices,
    grid,
    limma,
    methods,
    PMCMRplus,
    RColorBrewer,
    stats,
    utils,
    VennDiagram
Suggests:
    BiocGenerics,
    BiocStyle,
    data.table,
    knitr,
    rmarkdown,
    testthat
VignetteBuilder: knitr
License: CeCILL
Encoding: UTF-8
LazyData: true
URL: https://frama.link/etienne-thevenot
RoxygenNote: 6.1.1