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prolfqua_MaxQuant output #89

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Heidelbergrabbit opened this issue Jul 26, 2024 · 0 comments
Open

prolfqua_MaxQuant output #89

Heidelbergrabbit opened this issue Jul 26, 2024 · 0 comments

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@Heidelbergrabbit
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Dear Mr. Wolski, @wolski

I am reading your publication in JPR, 2023 regarding the R package prolfqua. It could be quite useful for my current work.

I have datasets from LFQ bottom-up proteomics and a complete output folder from MaxQuant search, including evidence.txt, peptides.txt and proteinGroups.txt.
I have the latest version of prolfqua (v1.2.5) installed. And R has a version number 4.4.0.

May I kindly request an online documentation, where you have a clear instruction step-by-step on how to import data from MaxQuant output? That would be very helpful for the large community who uses MaxQuant. Many thanks in advance!

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