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ESM-IF1: how to reproduce result about GVP-Transformer trained with only CATH4.3 #490
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ChangxinWang
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I want to reproduce the result about GVP-Transformer trained with only CATH4.3, but I can only find the training details about GVP-Transformer trained with (CATH+UR50) from Appendix Table A.1.
![image](https://user-images.githubusercontent.com/50441890/220500448-aba4e342-a71d-458c-8867-801937effed4.png)
I tried to train GVP-Transformer with only CATH datasets, using the hyperparameters listed in Appendix Table A.1 (gvp-4layers + Transformer-8layers),but I meet serious over-fitting, and resulting about recovery 20.0 on test split.
Could any hero give me more details about reproducing the result about GVP-Transformer trained with only CATH4.3? (just like the Appendix Table A.1). And I have another questions apart from hyperparameters:
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