forked from usegalaxy-eu/usegalaxy-eu-tools
-
Notifications
You must be signed in to change notification settings - Fork 0
/
asaim.yaml.lock
252 lines (252 loc) · 4.97 KB
/
asaim.yaml.lock
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
install_repository_dependencies: true
install_resolver_dependencies: true
install_tool_dependencies: false
tools:
- name: sra_tools
owner: iuc
revisions:
- 1790dcf3c32d
- 1ec814014652
- 494b2ec08162
- 4df8de2d0e48
- 516a54ddf218
- 653e89d73fc4
- 6591f049cf7e
- 69ebb7f46e45
- 6ea73833cf67
- 7068f48d0ef9
- 734abc7ac21d
- 751a694ec620
- 83c7d564b128
- aad3885b3216
- b723c120161a
- ba931a59dd59
- c441583adae5
- de0f7e0a3896
- e08a7ad4378b
- e407b9da183a
- f5ea3ce9b9b0
- f8054ea1c365
- fb723c531be5
tool_panel_section_label: Get Data
- name: fastqc
owner: devteam
revisions:
- 0b201de108b9
- 28d39af2dd06
- 3a458e268066
- 3fdc1a74d866
- 484e86282f4b
- 9337dd1fbc66
- d2cf2c0c8a11
- e28c965eeed4
tool_panel_section_label: FASTA/FASTQ
- name: prinseq
owner: iuc
revisions:
- 02befcb391f5
- 1ee282794de3
- 654b3a274ed5
- 6b865dde1baa
tool_panel_section_label: FASTA/FASTQ
- name: trim_galore
owner: bgruening
revisions:
- 11962ce40855
- 1bf4789584dc
- 2c1f0fe810f7
- 8352713cf939
- 949f01671246
- eb546ac2aab2
- f1e71aeaa923
tool_panel_section_label: FASTA/FASTQ
- name: trimmomatic
owner: pjbriggs
revisions:
- 14d05f2d511d
- 2bd7cdbb6228
- 415a165d92bb
- a60283899c6d
- f8a9a5eaca8a
tool_panel_section_label: FASTA/FASTQ
- name: multiqc
owner: iuc
revisions:
- 161f4383df15
- 1c2db0054039
- 3d93dd18d9f8
- 5e33b465d8d5
- 75c93c70d094
- 9a913cdee30e
- abfd8a6544d7
- b2f1f75d49c4
- bf675f34b056
- c19b16e5729c
- e4574a4d09d8
- f7985e0479b9
tool_panel_section_label: Quality Control
- name: format_cd_hit_output
owner: bebatut
revisions:
- 4015e9d6d277
tool_panel_section_label: Multiple Alignments
- name: sortmerna
owner: rnateam
revisions:
- 185effcdfb68
- 59252ca85c74
- 65c38d020fea
- b482293b2987
tool_panel_section_label: Annotation
- name: data_manager_sortmerna_database_downloader
owner: rnateam
revisions:
- 30bb49887172
tool_panel_section_label: Data Managers
- name: ncbi_blast_plus
owner: devteam
revisions:
- 2fe07f50a41e
- 3034ce97dd33
- 393a7a35383c
- 577d9c12411a
- 623f727cdff1
- 6560192c5098
- 6f386c5dc4fb
- 70e7dcbf6573
- 7538e2bfcd41
- 7f3c448e119b
- 9dabbfd73c8a
- b5f1f599d1fb
tool_panel_section_label: NCBI Blast
- name: diamond
owner: bgruening
revisions:
- 3c6b132b154a
- 54f751e413f4
- 98037ef3d2a9
tool_panel_section_label: NCBI Blast
- name: bwa
owner: devteam
revisions:
- 48f306c57611
tool_panel_section_label: Mapping
- name: bowtie2
owner: devteam
revisions:
- 019c2a81547a
- 42bb952b4e3c
- 8ccbdbe9a695
- 96d2e31a3938
- a9d4f71dbfb0
- c1ec08cb34f9
- ceb6467e276c
tool_panel_section_label: Mapping
- name: hmmer3
owner: iuc
revisions:
- 54b6b4d0613a
- b5066aa77fea
tool_panel_section_label: Annotation
- name: vsearch
owner: iuc
revisions:
- 9495df9dd6ef
- b3c7199d8786
- fae6527990af
tool_panel_section_label: Metagenomic Analysis
- name: nonpareil
owner: iuc
revisions:
- 280386b252a5
- 45210df786b9
- cef64c36c89e
tool_panel_section_label: Metagenomic Analysis
- name: megahit
owner: iuc
revisions:
- 02a822e32de7
- 14ddfc8ffb93
- 7518ee87b53d
- 98242353faa4
- a96f3ad4e0d8
- de387b2b2803
tool_panel_section_label: Assembly
- name: metaspades
owner: nml
revisions:
- 01a241476407
tool_panel_section_label: Assembly
- name: quast
owner: iuc
revisions:
- 3061c8b029e5
- 342a1d1fed7b
- 59db8ea8c845
- 675488238c96
- 72472698a2df
- 736d51130b41
- 7594365c546b
- 81df4950d65b
- 875d0f36d66f
- ebb0dcdb621a
- f30d03867854
tool_panel_section_label: Assembly
- name: valet
owner: iuc
revisions:
- 56236acaad45
tool_panel_section_label: Metagenomic Analysis
- name: data_manager_qiime_database_downloader
owner: iuc
revisions:
- c4dba88e85ef
- cbe065fbd038
- cc18f0f3514c
- ed86a8f378c8
tool_panel_section_label: Data Managers
- name: format_metaphlan2_output
owner: bebatut
revisions:
- 2bfa9b200600
tool_panel_section_label: Metagenomic Analysis
- name: group_humann2_uniref_abundances_to_go
owner: bebatut
revisions:
- cad28d7b49d2
tool_panel_section_label: Metagenomic Analysis
- name: compare_humann2_output
owner: bebatut
revisions:
- c1aca37cb1fc
tool_panel_section_label: Metagenomic Analysis
- name: interproscan5
owner: bgruening
revisions:
- 82547f0d3a29
tool_panel_section_label: Annotation
- name: combine_metaphlan2_humann2
owner: bebatut
revisions:
- 31394a0c0242
tool_panel_section_label: Metagenomic Analysis
- name: export2graphlan
owner: iuc
revisions:
- 635c90a27692
- b16989c1e3a7
- ed1becc01910
tool_panel_section_label: Graph/Display Data
- name: taxonomy_krona_chart
owner: crs4
revisions:
- e9005d1f3cfd
tool_panel_section_label: Metagenomic Analysis
- name: kleborate
owner: iuc
revisions:
- 374b2e9ade86
- '383036561810'
- 959920e3e800
- a7c43271312c
tool_panel_section_label: Metagenomic Analysis