Release 3.0.2

• Updated to latest biojava bugfix version 4.2.8
• Fixed issues #159 and #164
• Better handling of emails in web backend
• Uniprot version no longer in db name
• Some bug fixes

Release 3.0.1

Bug fixes and some improvements after the 3.0 release:

• Fixed Issue in heteromeric assemblies enumerated with contracted graph, #148
• New probability column in assembly view, default sorting of assemblies by probabilities, #153, #183
• Fixed issue #176
• Better help and faq

Release 3.0.0

A major rewrite of the application introducing many new features

• Full assembly enumeration and prediction of most likely assembly
• Probabilistic scoring of interfaces and assemblies, including confidence assignments.
• 2D and 3D visualizations of the lattice graph
• WebGL JavaScript viewer NGL
• Surface sequence entropy 3D visualizations in browser, no need of PSE files
• Based on BioJava 4.2, replacing OWL
• NCS operators now correctly used to build viral capsid structures
• Large structures with multiletter chain ids now supported
• PDB biounit assignments now displayed side-by-side with assembly predictions
• Interface clustering now based on contact similarity instead of RMSD
• Java 8
• Upgrades of all dependent libraries: GXT, GWT, hibernate, ...
• Major changes in data model to accommodate new functionality and to be more efficient
• Known issues: DNA/RNA-only assemblies are not called correctly, large heteromeric assemblies don't work correctly.

Release 2.1.2

• first release after rearranging of code into a single repo
• clean-up and rewrite of some of the db-tools: now more flexible thanks to new separate db-tools module
• minor additions to model
• new feature: hydrogen bond calculation
• implemented straight z-scores strategy for core-surface (switched off by default)
• bug fixes