diff --git a/_config.yml b/_config.yml index 4a63384f..239f92ee 100644 --- a/_config.yml +++ b/_config.yml @@ -4,7 +4,7 @@ title: Infectious Diseases Toolkit description: "Find tools and guidelines to help you access, analyse and share infectious disease data, and respond quickly to disease outbreaks." # Metadata description of the website -remote_theme: ELIXIR-Belgium/elixir-toolkit-theme@3.1.1 +remote_theme: ELIXIR-Belgium/elixir-toolkit-theme@3.2.0 gtag: G-TNT17YGXQ4 diff --git a/attributing-credit/index.md b/attributing-credit/index.md index 2960044b..e2eae782 100644 --- a/attributing-credit/index.md +++ b/attributing-credit/index.md @@ -1,5 +1,6 @@ --- title: Attributing credit +toc: false --- diff --git a/data-analysis/index.md b/data-analysis/index.md index 99b83c5f..6c95a0b5 100644 --- a/data-analysis/index.md +++ b/data-analysis/index.md @@ -1,5 +1,6 @@ --- title: Data analysis +toc: false --- Data analysis involves employing workflows tailored to different types of data, such as epidemiological, clinical, or molecular data. These workflows can include steps like data collection, cleaning, integration, and analysis, and use statistical and computational methods to uncover trends, associations, and patterns. Systematic data analysis helps researchers and health professionals to understand disease dynamics, assess intervention strategies, and improve disease prevention and control measures based on robust, data-driven insights. diff --git a/data-description/index.md b/data-description/index.md index a32454cb..cb52d950 100644 --- a/data-description/index.md +++ b/data-description/index.md @@ -1,5 +1,6 @@ --- title: Data description +toc: false --- Data description involves detailing the datasets used in research or surveillance. This includes, for example, finding and adhering to relevant standards for (meta)data and documentation to ensure that data are accurately represented, interoperable, and reusable. Accurate data description improves the clarity and reliability of information regarding disease incidence, transmission, and treatment outcomes, which is essential for ensuring effective public health interventions and scientific studies. Good data description promotes data sharing among various stakeholders, allowing for more meta-analyses, and encouraging collaborations to improve the understanding and management of disease. diff --git a/data-sources/index.md b/data-sources/index.md index 2034515d..265a6dd7 100644 --- a/data-sources/index.md +++ b/data-sources/index.md @@ -1,5 +1,6 @@ --- title: Data sources +toc: false --- Identifying and sharing data from related sources is important for comprehensive analysis and informed decision-making. Data sources may include clinical data from hospitals, laboratory results, epidemiological surveys, and public health records. Integrating these varied data sources enables researchers and health professionals to track disease spread, evaluate the effectiveness of interventions, and predict future outbreaks. Sharing data among various stakeholders whilst maintaining privacy and ethical standards supports real-time monitoring and aids in the global effort to control infectious diseases. diff --git a/national-resources/index.md b/national-resources/index.md index 77e81baf..519ca822 100644 --- a/national-resources/index.md +++ b/national-resources/index.md @@ -1,5 +1,6 @@ --- title: National resources +toc: false --- The national resources pages provide a general overview of resources, tools, and information related to the management of infectious disease data in a given country. The aim of these pages is ultimately to promote greater information exchange between countries so that all can benefit from each other's experiences. In particular, we hope that the descriptions of initiatives and resources developed in one country can provide valuable insights for others looking to create similar solutions for their own needs. diff --git a/provenance/index.md b/provenance/index.md index 73e8ac9c..52b88f91 100644 --- a/provenance/index.md +++ b/provenance/index.md @@ -1,5 +1,6 @@ --- title: Provenance +toc: false --- Provenance refers to the practice of meticulously tracking data, as well as associated processing and analysis steps, to ensure the integrity and reproducibility of research findings. This involves documenting the origins of data, all transformations and manipulations it undergoes, and the analytical methods applied. By maintaining detailed records of these elements, researchers can provide a transparent path from raw data to final results, facilitating the validation and verification of the data by other researchers. This is critical in infectious disease research, where data accuracy and reliability are essential for effective disease monitoring, outbreak response, and public health decision-making. diff --git a/quality-control/index.md b/quality-control/index.md index a7fceb12..bd7692c7 100644 --- a/quality-control/index.md +++ b/quality-control/index.md @@ -1,5 +1,6 @@ --- title: Quality control +toc: false --- Quality control ensures the accuracy and reliability of data collected and analysed. Various tools and methods are used at different stages, from collection and processing to analysis and reporting. Effective quality control measures help to identify and correct errors, reduce data variability, and enhance the credibility of findings. By implementing rigorous quality control protocols, researchers can provide robust, actionable insights that are critical for managing and mitigating infectious disease outbreaks. diff --git a/showcase/index.md b/showcase/index.md index ff6afc55..22e977d6 100644 --- a/showcase/index.md +++ b/showcase/index.md @@ -1,5 +1,6 @@ --- title: Showcase +toc: false --- Showcasing involves presenting applied examples of handling infectious disease data to demonstrate successful strategies and methodologies that have been developed and used across different countries and domains. Showcases highlight best practices, encourage learning, and facilitate the adoption of proven techniques across both the public health and scientific communities. diff --git a/tools-and-resources-list/index.md b/tools-and-resources-list/index.md index c7bbf962..bd55008f 100644 --- a/tools-and-resources-list/index.md +++ b/tools-and-resources-list/index.md @@ -1,6 +1,7 @@ --- title: Tools and resources list datatable: true +toc: false --- This page captures all tools and resources mentioned across the Infectious Diseases Toolkit. diff --git a/training-resources-list/index.md b/training-resources-list/index.md index 206ff222..8ac79fe7 100644 --- a/training-resources-list/index.md +++ b/training-resources-list/index.md @@ -1,6 +1,7 @@ --- title: Training resources list datatable: true +toc: false --- This page displays all training resources mentioned across the Infectious Diseases Toolkit.