From 532891934cd86d386670934bb0767b8b33c14b89 Mon Sep 17 00:00:00 2001
From: Nathan Lisgo <nathan@lisgo.co.uk>
Date: Mon, 11 Dec 2023 20:07:03 +0000
Subject: [PATCH 1/2] feat: add support for fetching specific DocMap by
 manuscript ID

This commit updates the fetch-and-parse method to allow fetching of specific DocMap data by manuscript ID. It also refactors the processing of DocMap data into a separate function for better code organization.
---
 src/fetch-and-parse.ts | 28 ++++++++++++++++++++--------
 1 file changed, 20 insertions(+), 8 deletions(-)

diff --git a/src/fetch-and-parse.ts b/src/fetch-and-parse.ts
index b73bf0b..d378b7a 100644
--- a/src/fetch-and-parse.ts
+++ b/src/fetch-and-parse.ts
@@ -3,17 +3,29 @@ import { exit } from 'process';
 import { DocMap } from './docmap';
 import { parsePreprintDocMap } from './docmap-parser';
 
-fetch('https://data-hub-api--stg.elifesciences.org/enhanced-preprints/docmaps/v1/index')
+const msid = process.argv[2] || null;
+const docmapUrl = `https://data-hub-api--stg.elifesciences.org/enhanced-preprints/docmaps/v2/${msid ? `by-publisher/elife/get-by-manuscript-id?manuscript_id=${msid}` : 'index'}`;
+
+const processDocmap = (docMapStruct: DocMap) => {
+  const docMapEditableStruct = JSON.parse(JSON.stringify(docMapStruct));
+  // You can make edits here
+
+  const docMapJson = JSON.stringify(docMapEditableStruct);
+  const parsedDocMap = parsePreprintDocMap(docMapJson);
+  console.log(JSON.stringify(docMapEditableStruct, undefined, '  '));
+  console.log(JSON.stringify(parsedDocMap, undefined, '  '));
+};
+
+fetch(docmapUrl)
   .then((data) => data.json())
   .then((data) => {
-    data.docmaps.forEach((docMapStruct: DocMap) => {
-      const docMapEditableStruct = JSON.parse(JSON.stringify(docMapStruct));
-      // You can make edits here
+    if (msid) {
+      processDocmap(data);
+      exit(1);
+    }
 
-      const docMapJson = JSON.stringify(docMapEditableStruct);
-      const parsedDocMap = parsePreprintDocMap(docMapJson);
-      console.log(JSON.stringify(docMapEditableStruct, undefined, '  '));
-      console.log(JSON.stringify(parsedDocMap, undefined, '  '));
+    data.docmaps.forEach((docMapStruct: DocMap) => {
+      processDocmap(docMapStruct);
       exit(1);
     });
   });

From e7ccc26083e1685131636cc343a3c4a7abeb14bd Mon Sep 17 00:00:00 2001
From: Nathan Lisgo <nathan@lisgo.co.uk>
Date: Tue, 12 Dec 2023 09:30:04 +0000
Subject: [PATCH 2/2] feat: enhance input handling in fetch-and-parse.ts

Improve the handling of command-line arguments in fetch-and-parse.ts.
Now, the script accepts only numeric manuscript IDs and raw JSON input.
If the input is not a numeric ID, it is treated as a JSON object,
parsed and processed.
---
 src/fetch-and-parse.ts | 31 +++++++++++++++++++------------
 1 file changed, 19 insertions(+), 12 deletions(-)

diff --git a/src/fetch-and-parse.ts b/src/fetch-and-parse.ts
index d378b7a..c48cbd1 100644
--- a/src/fetch-and-parse.ts
+++ b/src/fetch-and-parse.ts
@@ -3,7 +3,9 @@ import { exit } from 'process';
 import { DocMap } from './docmap';
 import { parsePreprintDocMap } from './docmap-parser';
 
-const msid = process.argv[2] || null;
+const input = process.argv[2] || '';
+
+const msid = (input.match(/^[0-9]+$/)) ? input : null;
 const docmapUrl = `https://data-hub-api--stg.elifesciences.org/enhanced-preprints/docmaps/v2/${msid ? `by-publisher/elife/get-by-manuscript-id?manuscript_id=${msid}` : 'index'}`;
 
 const processDocmap = (docMapStruct: DocMap) => {
@@ -16,16 +18,21 @@ const processDocmap = (docMapStruct: DocMap) => {
   console.log(JSON.stringify(parsedDocMap, undefined, '  '));
 };
 
-fetch(docmapUrl)
-  .then((data) => data.json())
-  .then((data) => {
-    if (msid) {
-      processDocmap(data);
-      exit(1);
-    }
+if (msid || input.length === 0) {
+  fetch(docmapUrl)
+    .then((data) => data.json())
+    .then((data) => {
+      if (msid) {
+        processDocmap(data);
+        exit(1);
+      }
 
-    data.docmaps.forEach((docMapStruct: DocMap) => {
-      processDocmap(docMapStruct);
-      exit(1);
+      data.docmaps.forEach((docMapStruct: DocMap) => {
+        processDocmap(docMapStruct);
+        exit(1);
+      });
     });
-  });
+} else {
+  processDocmap(JSON.parse(input));
+  exit(1);
+}