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ARTHRO_AAO.obo
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format-version: 1.2
date: 07:11:2012 10:06
saved-by: djs93
auto-generated-by: OBO-Edit 2.2
subsetdef: candidate_for_obsoletion "To be used to flag a term for obsoletion - pending further discussion."
subsetdef: olfactory_system_draft "adult olfactory system model"
synonymtypedef: InChIKey ""
synonymtypedef: systematic_synonym "" EXACT
default-namespace: AAO
remark: .
ontology: INSECT
property_value: http://purl.obolibrary.org/obo/IAO_synonym_typedef "" xsd:string
property_value: IAO:format-version "1.2" xsd:string
ontology: aao
lkjlkj
[Term]
id: AAO:0000000
name: anatomical entity
def: "Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species." [http:///api/ref/96591]
xref: CARO:0000000
xref: HAO:0000000
[Term]
id: AAO:0000003
name: anatomical structure
def: "Material anatomical entity which has inherent 3D shape and is generated by coordinated expression of the organism's own genome." [http:///api/ref/96591]
xref: CARO:0000003
xref: HAO:0000003
is_a: AAO:0000006 ! material anatomical entity
[Term]
id: AAO:0000004
name: portion of organism substance
def: "Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body." [http:///api/ref/96591]
xref: CARO:0000004
xref: HAO:0000004
is_a: AAO:0000006 ! material anatomical entity
[Term]
id: AAO:0000005
name: anatomical space
def: "Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures." [http:///api/ref/96591]
xref: CARO:0000005
xref: HAO:0000005
is_a: AAO:0000007 ! immaterial anatomical entity
[Term]
id: AAO:0000006
name: material anatomical entity
def: "Anatomical entity that has mass." [http:///api/ref/96591]
xref: CARO:0000006
xref: HAO:0000006
is_a: AAO:0000000 ! anatomical entity
disjoint_from: AAO:0000007 ! immaterial anatomical entity
[Term]
id: AAO:0000007
name: immaterial anatomical entity
def: "Anatomical entity that has no mass." [http:///api/ref/96591]
xref: CARO:0000007
xref: HAO:0000007
is_a: AAO:0000000 ! anatomical entity
[Term]
id: AAO:0000008
name: anatomical line
def: "Non-material anatomical entity of one dimension, which forms a boundary of an anatomical surface or is a modulation of an anatomical surface." [http:///api/ref/96591]
xref: CARO:0000008
xref: HAO:0000008
is_a: AAO:0000007 ! immaterial anatomical entity
[Term]
id: AAO:0000009
name: anatomical point
def: "Non-material anatomical entity of zero dimension, which forms a boundary of an anatomical line or surface." [http:///api/ref/96591]
xref: CARO:0000009
xref: HAO:0000009
is_a: AAO:0000007 ! immaterial anatomical entity
[Term]
id: AAO:0000010
name: anatomical surface
def: "Non-material anatomical entity of two dimensions, that is demarcated by anatomical lines or points on the external or internal surfaces of anatomical structures." [http:///api/ref/96591]
xref: CARO:0000010
xref: HAO:0000010
is_a: AAO:0000007 ! immaterial anatomical entity
[Term]
id: AAO:0000011
name: anatomical system
def: "Anatomical group that is has as its parts distinct anatomical structures interconnected by anatomical structures at a lower level of granularity." [http:///api/ref/96591]
xref: CARO:0000011
xref: HAO:0000011
is_a: AAO:0000054 ! anatomical group
[Term]
id: AAO:0000012
name: multi-cellular organism
def: "Anatomical structure that is an individual member of a species and consists of more than one cell." [http:///api/ref/96591]
synonym: "whole organism" RELATED [http://api.hymao.org/api/ref/68619]
xref: CARO:0000012
xref: HAO:0000012
is_a: AAO:0000003 ! anatomical structure
[Term]
id: AAO:0000013
name: cell
def: "The area that is surrounded by membrane and is derived from a cell by cell division." [http:///api/ref/96644]
xref: CARO:0000013
xref: HAO:0000013
[Term]
id: AAO:0000015
name: abdomen
def: "The tagma that is located posterior to the thorax." [http:///api/ref/96591]
comment: DOS: located immediately posterior to the thorax? formalise with immediately_posterior_to - subproperty of adjacent_to?
synonym: "der Hinterleib" RELATED [http://api.hymao.org/api/ref/78598]
xref: HAO:0000015
is_a: CARO:0010006 ! tagma
[Term]
id: AAO:0000016
name: abdominal segment
def: "The segment that is located posterior to the head and is does not bear legs." [http:///api/ref/96591]
comment: DOS: INSECT:0000026 def - "A segment that is part of an insect abdomen." [FBC:DOS]
xref: HAO:0000016
is_a: AAO:0000183 ! body segment
relationship: BFO:0000050 AAO:0000015 ! abdomen
[Term]
id: AAO:0000019
name: compound organ component
def: "Multi-tissue structure that is part of a compound organ." [http:///api/ref/96591]
xref: CARO:0000019
xref: HAO:0000019
is_a: AAO:0000055 ! multi-tissue structure
[Term]
id: AAO:0000021
name: simple organ
def: "Multi-tissue structure that is not part of a compound organ." [http:///api/ref/96591]
xref: CARO:0000021
xref: HAO:0000021
is_a: AAO:0000055 ! multi-tissue structure
[Term]
id: AAO:0000024
name: compound organ
def: "Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types." [http:///api/ref/96591]
xref: CARO:0000024
xref: HAO:0000024
is_a: CARO:0000003 ! anatomical structure
[Term]
id: AAO:0000027
name: male organism
def: "Gonochoristic organism that can produce male gametes." [http:///api/ref/96591]
xref: CARO:0000027
xref: HAO:0000027
is_a: AAO:0000048 ! gonochoristic organism
[Term]
id: AAO:0000028
name: female organism
def: "Gonochoristic organism that can produce female gametes." [http:///api/ref/96591]
xref: CARO:0000028
xref: HAO:0000028
is_a: AAO:0000048 ! gonochoristic organism
[Term]
id: AAO:0000029
name: hermaphroditic organism
def: "Multi-cellular organism that can produce both male and female gametes." [http:///api/ref/96591]
xref: CARO:0000029
xref: HAO:0000029
is_a: AAO:0000012 ! multi-cellular organism
[Term]
id: AAO:0000030
name: asexual organism
def: "Multi-cellular organism that does not produce gametes." [http:///api/ref/96591]
xref: CARO:0000030
xref: HAO:0000030
is_a: AAO:0000012 ! multi-cellular organism
[Term]
id: AAO:0000032
name: organism subdivision
def: "Anatomical structure which is a primary subdivision of whole organism. The mereological sum of these is the whole organism." [http:///api/ref/96591]
xref: CARO:0000032
xref: HAO:0000032
is_a: AAO:0000003 ! anatomical structure
[Term]
id: AAO:0000040
name: acellular anatomical structure
def: "Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue." [http:///api/ref/96591]
xref: CARO:0000040
xref: HAO:0000040
is_a: AAO:0000003 ! anatomical structure
[Term]
id: AAO:0000041
name: anatomical cluster
def: "The anatomical group that has its parts adjacent to one another." [http:///api/ref/96591]
xref: CARO:0000041
xref: HAO:0000041
is_a: AAO:0000054 ! anatomical group
[Term]
id: AAO:0000042
name: extraembryonic structure
def: "Anatomical structure that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo." [http:///api/ref/96591]
xref: CARO:0000042
xref: HAO:0000042
is_a: AAO:0000003 ! anatomical structure
[Term]
id: AAO:0000043
name: portion of tissue
def: "Anatomical structure, that consists of similar cells and intercellular matrix, aggregated according to genetically determined spatial relationships." [http:///api/ref/96591]
xref: CARO:0000043
xref: HAO:0000043
is_a: AAO:0000003 ! anatomical structure
[Term]
id: AAO:0000045
name: sequential hermaphroditic organism
def: "Hermaphroditic organism that produces gametes first of one sex, and then later of the other sex." [http:///api/ref/96591]
xref: CARO:0000045
xref: HAO:0000045
is_a: AAO:0000029 ! hermaphroditic organism
[Term]
id: AAO:0000046
name: synchronous hermaphroditic organism
def: "Hermaphroditic organism that produces both male and female gametes at the same time." [http:///api/ref/96591]
xref: CARO:0000046
xref: HAO:0000046
is_a: AAO:0000029 ! hermaphroditic organism
[Term]
id: AAO:0000048
name: gonochoristic organism
def: "Multi-cellular organism that has male and female sexes." [http:///api/ref/96591]
xref: CARO:0000048
xref: HAO:0000048
is_a: AAO:0000012 ! multi-cellular organism
[Term]
id: AAO:0000049
name: protandrous hermaphroditic organism
def: "Sequential hermaphroditic organism that produces gametes first of the male sex, and then later of the female sex." [http:///api/ref/96591]
xref: CARO:0000049
xref: HAO:0000049
is_a: AAO:0000045 ! sequential hermaphroditic organism
[Term]
id: AAO:0000050
name: protogynous hermaphroditic organism
def: "Sequential hermaphroditic organism that produces gametes first of the female sex, and then later of the male sex." [http:///api/ref/96591]
xref: CARO:0000050
xref: HAO:0000050
is_a: AAO:0000045 ! sequential hermaphroditic organism
[Term]
id: AAO:0000054
name: anatomical group
def: "Anatomical structure consisting of at least two non-overlapping organs, multi-tissue aggregates or portion of tissues or cells of different types that does not constitute an organism, organ, multi-tissue aggregate, or portion of tissue." [http:///api/ref/96591]
xref: CARO:0000054
xref: HAO:0000054
is_a: AAO:0000003 ! anatomical structure
[Term]
id: AAO:0000055
name: multi-tissue structure
def: "Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types." [http:///api/ref/96591]
xref: CARO:0000055
xref: HAO:0000055
is_a: AAO:0000003 ! anatomical structure
[Term]
id: AAO:0000062
name: cell space
def: "Anatomical space that is part of a cell." [http:///api/ref/96591]
xref: CARO:0000062
xref: HAO:0000062
is_a: AAO:0000005 ! anatomical space
[Term]
id: AAO:0000063
name: portion of cell substance
def: "Portion of organism substance located within a cell." [http:///api/ref/96591]
xref: CARO:0000063
xref: HAO:0000063
is_a: AAO:0000004 ! portion of organism substance
[Term]
id: AAO:0000064
name: single cell organism
def: "This is a dummy definition for ontology class AAO:0000064." [http:///api/ref/96591]
xref: HAO:0000064
[Term]
id: AAO:0000065
name: basal lamina
def: "Acellular anatomical structure that consists of a thin sheet of fibrous proteins that underlie and support the cells of an epithelium. It separates the cells of an epithelium from any underlying tissue." [http:///api/ref/96591]
synonym: "basement membrane" RELATED [http://api.hymao.org/api/ref/36875]
xref: CARO:0000065
xref: HAO:0000065
is_a: AAO:0000040 ! acellular anatomical structure
[Term]
id: AAO:0000066
name: epithelium
def: "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina." [http:///api/ref/96591]
xref: CARO:0000066
xref: HAO:0000066
is_a: AAO:0000043 ! portion of tissue
[Term]
id: AAO:0000067
name: simple cuboidal epithelium
def: "Unilaminar epithelium that consists of a single layer of cuboidal cells." [http:///api/ref/96591]
xref: CARO:0000067
xref: HAO:0000067
is_a: AAO:0000073 ! unilaminar epithelium
[Term]
id: AAO:0000068
name: simple columnar epithelium
def: "Unilaminar epithelium that consists of a single layer of columnar cells." [http:///api/ref/96591]
xref: CARO:0000068
xref: HAO:0000068
is_a: AAO:0000073 ! unilaminar epithelium
[Term]
id: AAO:0000069
name: multilaminar epithelium
def: "Epithelium that consists of more than one layer of epithelial cells." [http:///api/ref/96591]
xref: CARO:0000069
xref: HAO:0000069
is_a: AAO:0000066 ! epithelium
[Term]
id: AAO:0000070
name: simple squamous epithelium
def: "Unilaminar epithelium that consists of a single layer of squamous cells." [http:///api/ref/96591]
xref: CARO:0000070
xref: HAO:0000070
is_a: AAO:0000073 ! unilaminar epithelium
[Term]
id: AAO:0000071
name: atypical epithelium
def: "Epithelium that consists of epithelial cells not arranged in one ore more layers." [http:///api/ref/96591]
xref: CARO:0000071
xref: HAO:0000071
is_a: AAO:0000066 ! epithelium
[Term]
id: AAO:0000072
name: cavitated compound organ
def: "Compound organ that contains one or more macroscopic anatomical spaces." [http:///api/ref/96591]
xref: CARO:0000072
xref: HAO:0000072
is_a: CARO:0000003 ! anatomical structure
[Term]
id: AAO:0000073
name: unilaminar epithelium
def: "Epithelium that consists of a single layer of epithelial cells." [http:///api/ref/96591]
xref: CARO:0000073
xref: HAO:0000073
is_a: AAO:0000066 ! epithelium
[Term]
id: AAO:0000074
name: solid compound organ
def: "Compound organ that does not contain macroscopic anatomical spaces." [http:///api/ref/96591]
xref: CARO:0000074
xref: HAO:0000074
is_a: CARO:0000003 ! anatomical structure
[Term]
id: AAO:0000077
name: epithelial cell
def: "Cell which has as its part a cytoskeleton that allows for tight cell to cell contact and which has apical-basal cell polarity." [http:///api/ref/96591]
xref: CARO:0000077
xref: HAO:0000077
is_a: AAO:0000013 ! cell
[Term]
id: AAO:0000078
name: accessory gland
def: "The gland that empties into one of the reproductive ducts." [http:///api/ref/96591]
synonym: "glandula mucosa" RELATED [http://api.hymao.org/api/ref/68619, http://www.schulmeister.us/malereproductivesystem.html]
xref: HAO:0000078
is_a: AAO:0000375 ! gland
[Term]
id: AAO:0000082
name: acetabulum
def: "The sclerite surface that is concave and that accommodates another sclerite surface and that is adjacent to a foramen." [http:///api/ref/96591]
xref: HAO:0000082
is_a: ARTHRO:0000008 ! sclerite surface
[Term]
id: AAO:0000085
name: acrosternite
def: "The area that is located anteriorly of the antecosta of a sternum." [http:///api/ref/96591]
xref: HAO:0000085
is_a: AAO:0000146 ! area
relationship: BFO:0000050 AAO:0000956 ! sternum
[Term]
id: AAO:0000087
name: adult
def: "." [http:///api/ref/96591]
xref: FBbt:00003004
xref: HAO:0000087
is_a: AAO:0000012 ! multi-cellular organism
[Term]
id: AAO:0000088
name: adult abdomen
def: "The abdomen that is part of the adult." [http:///api/ref/96591]
xref: HAO:0000088
is_a: AAO:0000015 ! abdomen
relationship: BFO:0000050 AAO:0000182 ! body
[Term]
id: AAO:0000089
name: adult tagma
def: "The tagma that is part of the adult." [http:///api/ref/96591]
xref: HAO:0000089
is_a: CARO:0010006 ! tagma
relationship: BFO:0000050 AAO:0000087 ! adult
[Term]
id: AAO:0000090
name: adult thorax
def: "The thorax that is part of the adult." [http:///api/ref/96591]
xref: HAO:0000090
is_a: AAO:0001015 ! thorax
relationship: BFO:0000050 AAO:0000182 ! body
[Term]
id: AAO:0000096
name: annulus
def: "The sclerite that is ring-like and is not attached to muscles." [http:///api/ref/96591]
comment: DOS: should annulus be a sclerite or an appendage subdivision? Former would only be integument - not including whatever is inside.
synonym: "mere" RELATED [http://api.hymao.org/api/ref/68619]
xref: HAO:0000096
is_a: INSECT:0000080 ! sclerite
relationship: BFO:0000050 ARHTRO:0000101 ! integumentary system
[Term]
id: AAO:0000098
name: antecosta
def: "The ridge that extends along the anterior margin of the tergum and sternum and corresponds to the site of attachment of the median longitudinal intersegmental muscles." [http:///api/ref/96591]
xref: HAO:0000098
is_a: AAO:0000899 ! ridge
relationship: BFO:0000050 AAO:0000183 ! body segment
[Term]
id: AAO:0000099
name: antecostal sulcus
def: "The sulcus that corresponds to the antecosta." [http:///api/ref/96591]
synonym: "cinctus" RELATED [http://api.hymao.org/api/ref/78441]
xref: HAO:0000099
is_a: AAO:0000978 ! sulcus
relationship: BFO:0000050 AAO:0000183 ! body segment
[Term]
id: AAO:0000101
name: antenna
def: "The anatomical cluster that is composed of the scape, pedicel and flagellum." [http:///api/ref/96591]
comment: DOS: INSECT:0000007 A segmented appendage of the antennal segment. 'anatomical cluster' is the secret 'other'. Should be buried somewhere and never seen again...
synonym: "Fühler" RELATED [http://api.hymao.org/api/ref/78598]
xref: HAO:0000101
is_a: INSECT:0000036 ! appendage
relationship: BFO:0000050 AAO:0000397 ! head
[Term]
id: AAO:0000103
name: antennal rim
def: "The rim that surrounds the antennal foramen." [http:///api/ref/96591]
synonym: "antennal sclerite" RELATED [http://api.hymao.org/api/ref/36875, http://api.hymao.org/api/ref/68619]
synonym: "antennal socket" RELATED [http://api.hymao.org/api/ref/36927]
synonym: "torulus" RELATED [http://projects.biodiversity.be/ants/]
xref: HAO:0000103
is_a: AAO:0000900 ! rim
relationship: BFO:0000050 AAO:0000397 ! head
[Term]
id: AAO:0000104
name: antennal segment
def: "The segment that is the part of the antenna." [http:///api/ref/96591]
comment: DOS: Careful - name looks like the name of a segment. Def looks like 'segment of antenna' (INSECT:0000008). For this, parent class should be 'appendage segment'
xref: HAO:0000104
is_a: AAO:0000929 ! segment
relationship: BFO:0000050 AAO:0000101 ! antenna
[Term]
id: AAO:0000107
name: antennomere
def: "The multi-tissue structure that is a major subdivision of the antenna, including true segments (scape, pedicel) and annuli of the flagellum (flagellomere)." [http:///api/ref/96591]
comment: DOS: equivalent to 'AAO:0000104' ?
xref: HAO:0000107
is_a: AAO:0000055 ! multi-tissue structure
relationship: BFO:0000050 AAO:0000101 ! antenna
[Term]
id: AAO:0000142
name: apodeme
def: "The area that corresponds with an integumentary invagination." [http:///api/ref/96591]
comment: DOS: Needs to be made clear that this is an integumental structure. INSECT:0000118 'An internal cuticular process of the body wall.'
xref: HAO:0000142
is_a: AAO:0000146 ! area
relationship: BFO:0000050 ARTHRO:0000006 ! cuticle
[Term]
id: AAO:0000143
name: apophysis
def: "The apodeme that is tubercle-like or spine-like." [http:///api/ref/96591]
comment: DOS: INSECT:0000119 def: An arm-like apodeme
xref: HAO:0000143
is_a: AAO:0000142 ! apodeme
[Term]
id: AAO:0000146
name: area
def: "The anatomical structure that is delimited by material or immaterial anatomical entities." [http:///api/ref/96591]
comment: DOS: is this any different from 'material anatomical entity'? From it's usage - I would suggest sub with 'region of integument': ARTHRO:0000004 - ARTHRO:0000004
subset: candidate_for_obsoletion
xref: HAO:0000146
is_a: CARO:0000003 ! anatomical structure
[Term]
id: AAO:0000149
name: articular line
def: "The anatomical line that extends on the border between two articulating sclerites." [http:///api/ref/96591]
comment: DOS: anatomical line is a 2D struc. Perhaps better classified as a region of integument (conjunctiva)? that is very narrow?
xref: HAO:0000149
is_a: CARO:0000008 ! anatomical line
[Term]
id: AAO:0000150
name: articular process
def: "The cuticular protuberance that bears the articular surface." [http:///api/ref/96591]
synonym: "articular protuberance" RELATED [http:///api/ref/96644]
xref: HAO:0000150
is_a: AAO:0000822 ! process
relationship: BFO:0000050 INSECT:0000080 ! sclerite
[Term]
id: AAO:0000151
name: articulation
def: "The anatomical cluster that is composed of the fossa and the condyle inserting into the fossa." [http:///api/ref/96591]
comment: Do all articulations have condyle and fossa? Or should this be more specific term - joint.
xref: HAO:0000151
is_a: CARO:0000041 ! clustered anatomical group
[Term]
id: AAO:0000163
name: band
def: "The area that is oblong and differs from surrounding areas in coloration, surface sculpture and setae." [http:///api/ref/96591]
xref: HAO:0000163
is_a: AAO:0000146 ! area
[Term]
id: AAO:0000164
name: bar
def: "The cuticular protuberance that is linear and wider proximally than distally." [http:///api/ref/96591]
xref: HAO:0000164
is_a: AAO:0000822 ! process
relationship: BFO:0000050 INSECT:0000080 ! sclerite
[Term]
id: AAO:0000172
name: basiconic capitate peg sensillum
def: "This is a dummy definition for ontology class AAO:0000172." [http:///api/ref/96591]
comment: see Snodgrass defs of sensilla classified by cuticular component
xref: HAO:0000172
is_a: INSECT:0000005 ! sensillum
[Term]
id: AAO:0000173
name: basicosta
def: "The ridge that is located proximally and submarginally in the coxa." [http:///api/ref/96591]
xref: HAO:0000173
is_a: AAO:0000899 ! ridge
relationship: BFO:0000050 AAO:0000228 ! coxa
[Term]
id: AAO:0000174
name: basicostal suture
def: "The sulcus that corresponds to the basicosta." [http:///api/ref/96591]
xref: HAO:0000174
is_a: AAO:0000978 ! sulcus
relationship: BFO:0000050 AAO:0000228 ! coxa
[Term]
id: AAO:0000175
name: basicoxite
def: "The area that is located on the coxa proximal to the basicostal suture." [http:///api/ref/96591]
synonym: "coxomarginale" RELATED [http://api.hymao.org/api/ref/36875, http://api.hymao.org/api/ref/68619]
xref: HAO:0000175
is_a: AAO:0000146 ! area
relationship: BFO:0000050 AAO:0000228 ! coxa
[Term]
id: AAO:0000176
name: basisternum
def: "The area that is located anteriorly of the site of origin of the furca." [http:///api/ref/96591]
xref: HAO:0000176
is_a: AAO:0000146 ! area
relationship: BFO:0000050 AAO:0000309 ! eusternum
[Term]
id: AAO:0000178
name: basitarsus
def: "The tarsomere that is the proximal most annulus of the tarsus, connected proximally with the tibia and distally with the second tarsomere via membranous conjunctivae." [http:///api/ref/96591]
synonym: "first tarsomere" RELATED [http://api.hymao.org/api/ref/36899]
xref: HAO:0000178
is_a: AAO:0000991 ! tarsomere
relationship: BFO:0000050 AAO:0000992 ! tarsus
[Term]
id: AAO:0000181
name: blade
def: "The area that is located distally on the mandible." [http:///api/ref/96591]
xref: HAO:0000181
is_a: AAO:0000146 ! area
relationship: BFO:0000050 AAO:0000506 ! mandible
[Term]
id: AAO:0000182
name: body
def: "The area that does not contain the appendages." [http:///api/ref/96591]
synonym: "trunk" RELATED [http://api.hymao.org/api/ref/68619]
xref: HAO:0000182
is_a: CARO:0000041 ! clustered anatomical group
relationship: BFO:0000050 AAO:0000012 ! multi-cellular organism
[Term]
id: AAO:0000183
name: body segment
def: "The segment that is the part of the body." [http:///api/ref/96591]
comment: DOS - CARO2 has: id: CARO:0010005 ; segment def: An organism subdivision that is is one of a set of semi-repetitive organism subdivisions serially arranged along the anterior-posterior axis of each individual organism. [FBC:DOS]. Note - no general term for segment covering appendage segment and body segment.
synonym: "somite" RELATED [http://api.hymao.org/api/ref/43470, http://api.hymao.org/api/ref/68619]
xref: HAO:0000183
is_a: AAO:0000929 ! segment
relationship: BFO:0000050 AAO:0000182 ! body
[Term]
id: AAO:0000187
name: cardo
def: "The area that is located proximally on the maxilla, proximal to the stipes." [http:///api/ref/96591]
xref: HAO:0000187
is_a: AAO:0000146 ! area
relationship: BFO:0000050 AAO:0000513 ! maxilla
[Term]
id: AAO:0000188
name: carina
def: "The cuticular protuberance that is linear and external." [http:///api/ref/96591]
synonym: "crest" RELATED [http://api.hymao.org/api/ref/67791]
synonym: "lamella" RELATED [http://api.hymao.org/api/ref/67791, http://canacoll.org/Hym/Staff/Gibson/apss/chalglos.htm]
synonym: "lamina" RELATED [http://api.hymao.org/api/ref/67791]
synonym: "ledge" RELATED [http://api.hymao.org/api/ref/96437]
synonym: "ridge" RELATED [http://api.hymao.org/api/ref/96546]
xref: HAO:0000188
is_a: AAO:0000822 ! process
relationship: BFO:0000050 INSECT:0000080 ! sclerite
[Term]
id: AAO:0000191
name: cercus
def: "The sense organ that located apicolaterally on one of the apicalmost abdominal terga and attaches to a large nerve cord." [http:///api/ref/96591]
comment: DOS: sense organ or appendage?
synonym: "cercal plate" RELATED [http://canacoll.org/Hym/Staff/Gibson/apss/chalglos.htm]
synonym: "larval pygopod" RELATED [http://api.hymao.org/api/ref/36875, http://api.hymao.org/api/ref/67781]
synonym: "penicillus" RELATED [http://api.hymao.org/api/ref/67828, http://api.hymao.org/api/ref/68619]
synonym: "pygostyle" RELATED [http://api.hymao.org/api/ref/67781]
synonym: "pygostylus" RELATED [http://canacoll.org/Hym/Staff/Gibson/apss/chalglos.htm]
synonym: "socius" RELATED [http://api.hymao.org/api/ref/36875, http://api.hymao.org/api/ref/67823, http://api.hymao.org/api/ref/68619]
xref: HAO:0000191
is_a: FUNCARO:0000000 ! sense organ
[Term]
id: AAO:0000198
name: chalaza
def: "The seta that is located on an integumentary evagination." [http:///api/ref/96591]
comment: DOS: How generally used is this term?
xref: HAO:0000198
is_a: AAO:0000935 ! seta
relationship: BFO:0000050 ARHTRO:0000101 ! integumentary system
[Term]
id: AAO:0000200
name: cheek
def: "The area that is located ventrally in between the eye and the oral foramen." [http:///api/ref/96591]
xref: HAO:0000200
is_a: AAO:0000146 ! area
relationship: BFO:0000050 AAO:0000234 ! cranium
[Term]
id: AAO:0000201
name: cibarium
def: "The anatomical space that is the anteriormost part of the alimentary canal and is delimited proximally by the proximomedian margin of the sitophore and distally by the functional mouth." [http:///api/ref/96591]
comment: Space or portion of pharynx? Looks like this is equivalent to cibarial lumen in FBbt. For cibarium: FBbt:00004526 ; adult cibarium def: The proximal portion of the adult pharynx, which functions as a sucking pump. It consists of two arched sclerotized plates. The posterior plate is fixed in position by its connections with the clypeus. The anterior plate fits against the concave side of the posterior plate and bears a ridge shaped apodeme (apodemal carina) that is attached to large dilator muscles that attach to clypeus. Their contraction pulls the anterior plate forward, enlarging the cibarial lumen and thus producing suction.
synonym: "sucking pump" RELATED [http://api.hymao.org/api/ref/36875]
xref: HAO:0000201
is_a: CARO:0000005 ! anatomical space
[Term]
id: AAO:0000202
name: circumocular ridge
def: "The ridge that extends along the margin of the compound eye and corresponds to the ocular suture." [http:///api/ref/96591]
xref: HAO:0000202
is_a: AAO:0000899 ! ridge
relationship: BFO:0000050 AAO:0000234 ! cranium
[Term]
id: AAO:0000212
name: clypeus
def: "The area that corresponds to the site of origin of the clypeo-epipharyngeal muscle." [http:///api/ref/96591]
xref: HAO:0000212
is_a: AAO:0000146 ! area
[Term]
id: AAO:0000213
name: coeloconic sensillum
def: "This is a dummy definition for ontology class AAO:0000213." [http:///api/ref/96591]
comment: see Snodgrass for def.
xref: HAO:0000213
is_a: INSECT:0000005 ! sensillum
[Term]
id: AAO:0000217
name: compound eye
def: "The compound organ that is composed of ommatidia." [http:///api/ref/96591]
synonym: "Auge" RELATED [http://api.hymao.org/api/ref/78598]
synonym: "eye" RELATED [http://api.hymao.org/api/ref/68619, http://api.hymao.org/api/ref/78236]
xref: HAO:0000217
is_a: CARO:0000003 ! anatomical structure
relationship: BFO:0000050 AAO:0000397 ! head
[Term]
id: AAO:0000220
name: condyle
def: "The articular surface that is convex and is inserted into the fossa of an adjacent sclerite." [http:///api/ref/96591]
xref: HAO:0000220
is_a: INSECT:0000124 ! articular surface
relationship: BFO:0000050 AAO:0000151 ! articulation
relationship: BFO:0000050 INSECT:0000080 ! sclerite
[Term]
id: AAO:0000221
name: conjunctiva
def: "The area of the integument that is weakly sclerotized, with thin exocuticle." [http:///api/ref/96591]
synonym: "arthrodial membrane" RELATED [http://api.hymao.org/api/ref/67791, ISBN:0521578906]
synonym: "corium" RELATED [http://api.hymao.org/api/ref/36875, http://api.hymao.org/api/ref/68619]
xref: HAO:0000221
is_a: AAO:0000146 ! area
relationship: BFO:0000050 ARHTRO:0000101 ! integumentary system
[Term]
id: AAO:0000223
name: corner
def: "The projection that is located at the intersection of two or more edges." [http:///api/ref/96591]
xref: HAO:0000223
is_a: AAO:0000829 ! projection
relationship: BFO:0000050 INSECT:0000080 ! sclerite
[Term]
id: AAO:0000228
name: coxa
def: "The leg segment that is connected to the body and to the trochanter via conjunctivae and muscles." [http:///api/ref/96591]
synonym: "Hüfte" RELATED [http://api.hymao.org/api/ref/78598]
xref: HAO:0000228
is_a: AAO:0000495 ! leg segment
relationship: BFO:0000050 AAO:0000494 ! leg
[Term]
id: AAO:0000229
name: coxal foramen
def: "The foramen that is located lateroventrally of the pectus, in which the coxa is positioned." [http:///api/ref/96591]
synonym: "coxal cavity" RELATED [http://api.hymao.org/api/ref/67791]
xref: HAO:0000229
is_a: AAO:0000345 ! foramen
[Term]
id: AAO:0000230
name: coxal corium
def: "The conjunctiva that connects the coxa to the pectus." [http:///api/ref/96591]
xref: HAO:0000230
is_a: AAO:0000221 ! conjunctiva
relationship: BFO:0000050 AAO:0001013 ! thoracic segment
[Term]
id: AAO:0000231
name: cranial condyle
def: "The condyle that is located on the cranium." [http:///api/ref/96591]
xref: HAO:0000231
is_a: AAO:0000220 ! condyle
relationship: BFO:0000050 AAO:0000234 ! cranium
[Term]
id: AAO:0000232
name: cranio-antennal muscle
def: "The muscle that arises from the cranium and inserts on the scape." [http:///api/ref/96591]
xref: HAO:0000232
is_a: AAO:0001172 ! antennal muscle
relationship: AAO:attached_to AAO:0000234 ! cranium
relationship: AAO:attached_to AAO:0000908 ! scape
[Term]
id: AAO:0000233
name: cranio-pharyngeal plate muscle
def: "The head muscle that arises internally from the face and inserts on the pharyngeal plate." [http:///api/ref/96591]
xref: HAO:0000233
is_a: AAO:0001099 ! head muscle
[Term]
id: AAO:0000234
name: cranium
def: "The sclerite that articulates with the mandible and encloses the brain." [http:///api/ref/96591]
xref: HAO:0000234
is_a: INSECT:0000080 ! sclerite
relationship: BFO:0000050 AAO:0000397 ! head
relationship: BFO:0000050 AAO:0000398 ! head capsule
[Term]
id: AAO:0000235
name: crest
def: "This is a dummy definition for ontology class AAO:0000235." [http:///api/ref/96591]
xref: HAO:0000235
[Term]
id: AAO:0000241
name: depression
def: "The area that is external, concave, and does not correspond to an apodeme." [http:///api/ref/96591]
synonym: "fovea" RELATED [http://api.hymao.org/api/ref/68619]
synonym: "pit" RELATED [http://api.hymao.org/api/ref/67791]
synonym: "trough" RELATED [http://api.hymao.org/api/ref/67791]
xref: HAO:0000241
is_a: AAO:0000146 ! area
[Term]
id: AAO:0000242
name: dicondylic joint
def: "The joint that is composed of two sclerites connected with to articulations." [http:///api/ref/96591]
comment: Attempted formalisation: INSECT:0000123 'insect articulation' and (has_component exactly 2 condyle)
xref: HAO:0000242
is_a: AAO:0001146 ! joint
[Term]
id: AAO:0000277
name: dorso-pleural line
def: "The anatomical line that is located between the dorsum and the pleuron." [http:///api/ref/96591]
xref: HAO:0000277
is_a: CARO:0000008 ! anatomical line
relationship: BFO:0000050 AAO:0000929 ! segment
[Term]
id: AAO:0000281
name: dorsum
def: "The area of the segment that is dorsal." [http:///api/ref/96591]
xref: HAO:0000281
is_a: AAO:0000146 ! area
relationship: BFO:0000050 AAO:0000929 ! segment
[Term]
id: AAO:0000282
name: duct
def: "The cavitated compound organ that is canal-like, layered with epithelial cells and leads from an exocrine gland or organ." [http:///api/ref/96591]
comment: attempted formalisation from FUNCARO: FUNCARO:0000078 ; duct EquivalentTo epithelial tube (CARO:0010009) that has_function_in (BFO:000015) transport (GO:0006810)
xref: HAO:0000282
is_a: AAO:0000072 ! cavitated compound organ
relationship: BFO:0000050 AAO:0000182 ! body
[Term]
id: AAO:0000285
name: edge
def: "The line that separates two areas that are oriented differently." [http:///api/ref/96591]
xref: HAO:0000285
is_a: AAO:0000510 ! margin
[Term]
id: AAO:0000286
name: egg
def: ". IMPORT DUPLICATE." [http:///api/ref/96591]
xref: FBbt:00000034
xref: HAO:0000286
is_a: AAO:0000012 ! multi-cellular organism
[Term]
id: AAO:0000289
name: encircling groove
def: "The anatomical space that surrounds the plate-like structure in a multiporous plate sensillum." [http:///api/ref/96591]
comment: very general sounding label for a very specific structure.
xref: HAO:0000289
is_a: CARO:0000005 ! anatomical space
[Term]
id: AAO:0000290
name: endocuticle
def: "The procuticle that is not tanned (sclerotised, proteins scarcely crosslinked) and located between the Schmidt's layer and the exocuticle." [http:///api/ref/96591]
synonym: "endocuticula" RELATED [http://api.hymao.org/api/ref/36875, http://api.hymao.org/api/ref/68619]
xref: HAO:0000290
is_a: AAO:0001313 ! procuticle
is_a: CARO:0000040 ! acellular anatomical structure
relationship: BFO:0000050 ARHTRO:0000101 ! integumentary system
[Term]
id: AAO:0000309
name: eusternum
def: "The sclerite that is located on the thoracic sternum posteriorly of the spinasternum." [http:///api/ref/96591]
xref: HAO:0000309
is_a: INSECT:0000080 ! sclerite
relationship: BFO:0000050 AAO:0001014 ! thoracic sternum
[Term]
id: AAO:0000310
name: evaporatorium
def: "The area that is modified for releasing glandular products." [http:///api/ref/96591]
xref: HAO:0000310
is_a: AAO:0000146 ! area
[Term]
id: AAO:0000311
name: exocuticle
def: "The procuticle that is tanned (sclerotised, proteins are highly crosslinked) and located between the endocuticle and epicuticle." [http:///api/ref/96591]
synonym: "exocuticula" RELATED [http://api.hymao.org/api/ref/36875, http://api.hymao.org/api/ref/68619]
xref: HAO:0000311
is_a: AAO:0001313 ! procuticle
relationship: BFO:0000050 ARHTRO:0000101 ! integumentary system
[Term]
id: AAO:0000315
name: exuvia
def: "The cuticle that is discarded after a molt." [http:///api/ref/96591]
xref: HAO:0000315
is_a: ARTHRO:0000006 ! cuticle
[Term]
id: AAO:0000327
name: femur
def: "The leg segment that is distal to the trochanter and proximal to the tibia." [http:///api/ref/96591]
synonym: "Schenkel" RELATED [http://api.hymao.org/api/ref/78598]
xref: HAO:0000327
is_a: AAO:0000495 ! leg segment
relationship: BFO:0000050 AAO:0000494 ! leg
[Term]
id: AAO:0000342
name: flagellomere
def: "The annulus that is located distally of the pedicel." [http:///api/ref/96591]
synonym: "flagellar segment" RELATED [http://canacoll.org/Hym/Staff/Gibson/apss/chalglos.htm]
synonym: "flagellar subdivision" RELATED [http://api.hymao.org/api/ref/36927]
xref: HAO:0000342
is_a: AAO:0000096 ! annulus
relationship: OBO_REL:0000004 AAO:0000343 ! flagellum
[Term]
id: AAO:0000343
name: flagellum
def: "The anatomical cluster composed of flagellomeres." [http:///api/ref/96591]
xref: HAO:0000343
is_a: CARO:0000041 ! clustered anatomical group
[Term]
id: AAO:0000344
name: flange
def: "The projection that is lamella-like and is located on a rim, carina, apodeme or edge." [http:///api/ref/96591]
synonym: "crest" RELATED [http://api.hymao.org/api/ref/67791]
xref: HAO:0000344
is_a: AAO:0000829 ! projection
[Term]
id: AAO:0000345
name: foramen
def: "The anatomical space that is surrounded by sclerites and allows for the passage of haemolymph, nerves and tracheae." [http:///api/ref/96591]
comment: DOS: FBbt:00004478; foramen def: An aperture in some gross body part. Most commonly used for apertures in the exoskeleton, but also used for internal structures such as the esophageal foramen of the brain. [FBC:DOS&SR, FBC:gg]
xref: HAO:0000345
is_a: CARO:0000005 ! anatomical space
[Term]
id: AAO:0000347
name: occipital foramen
def: "The foramen that is delimited dorsally by the postocciput." [http:///api/ref/96591]
synonym: "foramen magnum" RELATED [http://canacoll.org/Hym/Staff/Gibson/apss/chalglos.htm]
xref: HAO:0000347
is_a: AAO:0000345 ! foramen
[Term]
id: AAO:0000348