From 8e902f958f9fa5385f821f25a04849b3ff394a98 Mon Sep 17 00:00:00 2001 From: Serge Koudoro Date: Mon, 7 Aug 2023 12:46:49 -0400 Subject: [PATCH] update recobundle parameter --- quantconn/process.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/quantconn/process.py b/quantconn/process.py index 3848355..b1d298f 100644 --- a/quantconn/process.py +++ b/quantconn/process.py @@ -184,7 +184,7 @@ def process_data(nifti_fname, bval_fname, bvec_fname, t1_fname, output_path, # for reduction_thr, pruning_thr in attempts: recognized_bundle, model_labels = rb.recognize( model_bundle=model_bundle.streamlines, model_clust_thr=0.1, - reduction_thr=20, pruning_thr=10, + reduction_thr=18, pruning_thr=8, reduction_distance='mdf', pruning_distance='mdf', slr=True) # if len(recognized_bundle):