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DATS JSON schemas

This repository contains JSON schemas for the DAta Tag Suite (DATS) model for describing datasets.

The schemas can be accessed through the permanent identifiers with the following prefix: http://w3id.org/dats/schema/. For example , the dataset schema is available at: http://w3id.org/dats/schema/dataset_schema.json

Documentation

The documentation about DATS is available at: https://datatagsuite.github.io/docs/html/

Previously, previous development of DATS can be found at this repository: https://github.com/datatagsuite/WG3-MetadataSpecifications

DATS entities are represented in this overview diagram, including 'core entities' that allow to describe datasets irrespective of their domains and a set of entities that are specific for datasets in the biomedical domain.

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Publications

  • Xiaoling Chen, Anupama E Gururaj, Burak Ozyurt, Ruiling Liu, Ergin Soysal, Trevor Cohen, Firat Tiryaki, Yueling Li, Nansu Zong, Min Jiang, Deevakar Rogith, Mandana Salimi, Hyeon-eui Kim, Philippe Rocca-Serra, Alejandra Gonzalez-Beltran, Claudiu Farcas, Todd Johnson, Ron Margolis, George Alter, Susanna-Assunta Sansone, Ian M Fore, Lucila Ohno-Machado, Jeffrey S Grethe, Hua Xu; DataMed – an open source discovery index for finding biomedical datasets, Journal of the American Medical Informatics Association, Volume 25, Issue 3, 1 March 2018, Pages 300–308, https://doi.org/10.1093/jamia/ocx121
  • Alejandra N Gonzalez-Beltran, John Campbell, Patrick Dunn, Diana Guijarro, Sanda Ionescu, Hyeoneui Kim, Jared Lyle, Jeffrey Wiser, Susanna-Assunta Sansone, Philippe Rocca-Serra; Data discovery with DATS: exemplar adoptions and lessons learned, Journal of the American Medical Informatics Association, Volume 25, Issue 1, 1 January 2018, Pages 13–16, https://doi.org/10.1093/jamia/ocx119
  • Lucila Ohno-Machado, Susanna-Assunta Sansone, George Alter, Ian Fore, Jeffrey Grethe, Hua Xu, Alejandra Gonzalez-Beltran, Philippe Rocca-Serra, Anupama E Gururaj, Elizabeth Bell, Ergin Soysal, Nansu Zong & Hyeon-eui Kim; Finding useful data across multiple biomedical data repositories using DataMed; Nature Genetics 49, 816–819 (2017) https://doi.org/10.1038/ng.3864
  • Susanna-Assunta Sansone#, Alejandra Gonzalez-Beltran#, Philippe Rocca-Serra#, George Alter, Jeffrey S. Grethe, Hua Xu, Ian M. Fore, Jared Lyle, Anupama E. Gururaj, Xiaoling Chen, Hyeon-eui Kim, Nansu Zong, Yueling Li, Ruiling Liu, I. Burak Ozyurt & Lucila Ohno-Machado; DATS, the data tag suite to enable discoverability of datasets; Scientific Data volume 4, Article number: 170059 (2017) DOI: 10.1038/sdata.2017.59 #=equal contribution; Pre-print: bioRxiv DOI: 10.1101/103143 .

License

These JSON schemas are distributed under CC BY-SA 3.0 license.