From ccc9c703c0bccd1101ccc844fbd7c1c43ffbff9c Mon Sep 17 00:00:00 2001 From: Gulnara Tagirdzhanova Date: Wed, 27 Sep 2023 23:14:53 +0100 Subject: [PATCH 1/2] replaced the broken link to the Genomics Workshop setup page --- index.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/index.md b/index.md index 242e5e5d..1d682de1 100644 --- a/index.md +++ b/index.md @@ -33,7 +33,7 @@ concept of genomic variation within a population. Participants should bring thei This lesson is part of a workshop that uses data hosted on an Amazon Machine Instance (AMI). Workshop participants will be given information on how to log-in to the AMI during the workshop. Learners using these materials for self-directed study will need to set up their own -AMI. Information on setting up an AMI and accessing the required data is provided on the [Genomics Workshop setup page](https://www.datacarpentry.org/genomics-workshop/setup.html). +AMI. Information on setting up an AMI and accessing the required data is provided on the [Genomics Workshop setup page](https://www.datacarpentry.org/genomics-workshop/index.html). :::::::::::::::::::::::::::::::::::::::::::::::::: From 09f2b4c2134e29bb7862f2a37d82535be67fd896 Mon Sep 17 00:00:00 2001 From: Gulnara Tagirdzhanova Date: Wed, 27 Sep 2023 23:15:35 +0100 Subject: [PATCH 2/2] fixed the link to the data page by removing the last slash --- episodes/03-ncbi-sra.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/episodes/03-ncbi-sra.md b/episodes/03-ncbi-sra.md index de903426..4e207533 100644 --- a/episodes/03-ncbi-sra.md +++ b/episodes/03-ncbi-sra.md @@ -47,7 +47,7 @@ The excerpt from the paper below includes information on how to locate the seque > version of the paper. Correspondence and requests for materials should be > addressed to R.E.L. (lenski *at* msu.edu) -**At the beginning of this workshop we gave you [experimental information about these data](https://www.datacarpentry.org/organization-genomics/data/). This lesson uses a *subset* of SRA files, from a small *subproject* of the BioProject database +**At the beginning of this workshop we gave you [experimental information about these data](https://www.datacarpentry.org/organization-genomics/data). This lesson uses a *subset* of SRA files, from a small *subproject* of the BioProject database "PRJNA294072". To find these data you can follow the instructions below:** 1. Notice that the paper references "PRJNA294072" as a "BioProject" at NCBI. If you go to the [NCBI website](https://www.ncbi.nlm.nih.gov/) and search for "PRJNA294072" you will be shown a link to the "Long-Term Evolution Experiment with E. coli" BioProject. Here is the link to that database: [https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA294072](https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA294072).