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Unable to display multiWig tracks #211

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kb-bioinf opened this issue Jan 25, 2017 · 0 comments
Open

Unable to display multiWig tracks #211

kb-bioinf opened this issue Jan 25, 2017 · 0 comments

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@kb-bioinf
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kb-bioinf commented Jan 25, 2017

Biodalliance (v0.13) will not display the data in a multiWig track. The track will appear on the browser, but the data will not be displayed. There is no error suggesting biodalliance cannot find the data in the console. I cannot find any documentation regarding multiWig display in biodalliance so any help is much appreciated. I have used the following configuration using data from the FANTOM5 project:

track Total_and_max_counts_multiwig
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi off
shortLabel Total and max read counts
longLabel Total and max counts of CAGE reads
type bigWig 0 100
viewLimits 0:100
visibility full
maxHeightPixels 64:64:11
html Total_counts_multiwig

	track TotalCounts_Fwd
	parent Total_and_max_counts_multiwig
	shortLabel Total counts of CAGE reads (fwd)
	longLabel Total counts of CAGE reads forward
	type bigWig 0 100
	description Total Pooled Counts(Fwd) 
	bigDataUrl reads/ctssTotalCounts.fwd.bw
	color 255,0,0

	track TotalCounts_Rev
	parent Total_and_max_counts_multiwig
	shortLabel Total counts of CAGE reads (rev)
	longLabel Total counts of CAGE reads reverse
	type bigWig 0 100
	description Total Pooled Counts(Rev)
	bigDataUrl reads/ctssTotalCounts.rev.bw
	color 0,0,255
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