From 447241c6f85425d12e011eee19f01ec1099fb326 Mon Sep 17 00:00:00 2001
From: Mark Piper <mark.piper@colorado.edu>
Date: Fri, 20 Sep 2024 11:54:38 -0600
Subject: [PATCH] Make pretty

---
 examples/README.ipynb         |  4 +-
 examples/bmi-topography.ipynb | 98 +++++++++++++++++------------------
 examples/topography.ipynb     | 30 +++++------
 3 files changed, 66 insertions(+), 66 deletions(-)

diff --git a/examples/README.ipynb b/examples/README.ipynb
index 004b940..e57da47 100644
--- a/examples/README.ipynb
+++ b/examples/README.ipynb
@@ -2,7 +2,7 @@
  "cells": [
   {
    "cell_type": "markdown",
-   "id": "8e3d936a-be52-413e-b714-8f1eba301d21",
+   "id": "0",
    "metadata": {},
    "source": [
     "# Examples: bmi-topography"
@@ -10,7 +10,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "0bfc1e88-64f6-46b0-bf7d-ecb2487fae9c",
+   "id": "1",
    "metadata": {},
    "source": [
     "Here are a few examples of using the Topography data component,\n",
diff --git a/examples/bmi-topography.ipynb b/examples/bmi-topography.ipynb
index 100696f..982b0ca 100644
--- a/examples/bmi-topography.ipynb
+++ b/examples/bmi-topography.ipynb
@@ -27,7 +27,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "4",
+   "id": "3",
    "metadata": {},
    "source": [
     "Import a pair of libraries for later use:"
@@ -36,7 +36,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "5",
+   "id": "4",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -46,7 +46,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "6",
+   "id": "5",
    "metadata": {},
    "source": [
     "## Fetch and load data"
@@ -54,7 +54,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "7",
+   "id": "6",
    "metadata": {},
    "source": [
     "Import the `BmiTopography` class from the `bmi-topography` package:"
@@ -63,7 +63,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "8",
+   "id": "7",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -72,7 +72,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "9",
+   "id": "8",
    "metadata": {},
    "source": [
     "Create an instance of this class."
@@ -81,7 +81,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "10",
+   "id": "9",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -90,7 +90,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "11",
+   "id": "10",
    "metadata": {},
    "source": [
     "Calling `help` on the instance displays all the BMI methods that are available."
@@ -99,7 +99,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "12",
+   "id": "11",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -108,7 +108,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "13",
+   "id": "12",
    "metadata": {},
    "source": [
     "The first step in using a BMI is calling the `initialize` method.\n",
@@ -120,7 +120,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "14",
+   "id": "13",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -130,7 +130,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "15",
+   "id": "14",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -139,7 +139,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "16",
+   "id": "15",
    "metadata": {},
    "source": [
     "Call `initialize` with the sample configuration file."
@@ -148,7 +148,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "17",
+   "id": "16",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -157,7 +157,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "18",
+   "id": "17",
    "metadata": {},
    "source": [
     "This step may take a moment, as the `Topography` library fetches and downloads the data from the internet.\n",
@@ -168,7 +168,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "19",
+   "id": "18",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -177,7 +177,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "20",
+   "id": "19",
    "metadata": {},
    "source": [
     "## Access data through the BMI"
@@ -185,7 +185,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "21",
+   "id": "20",
    "metadata": {},
    "source": [
     "Now that we've fetched the data, let's access it through the BMI.\n",
@@ -198,7 +198,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "22",
+   "id": "21",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -207,7 +207,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "23",
+   "id": "22",
    "metadata": {},
    "source": [
     "The (long) name for the variable representing elevation is an instance of a [CSDMS Standard Name](https://csdms.colorado.edu/wiki/CSDMS_Standard_Names).\n",
@@ -216,7 +216,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "24",
+   "id": "23",
    "metadata": {},
    "source": [
     "Find the data type of the elevation data."
@@ -225,7 +225,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "25",
+   "id": "24",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -235,7 +235,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "26",
+   "id": "25",
    "metadata": {},
    "source": [
     "Within the BMI, functions that describe the grids that variables are defined on take an index instead of a variable name.\n",
@@ -246,7 +246,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "27",
+   "id": "26",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -256,7 +256,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "28",
+   "id": "27",
    "metadata": {},
    "source": [
     "Then find the total size of the elevation data."
@@ -265,7 +265,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "29",
+   "id": "28",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -275,7 +275,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "30",
+   "id": "29",
    "metadata": {},
    "source": [
     "Next, get the elevation values.\n",
@@ -291,7 +291,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "31",
+   "id": "30",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -301,7 +301,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "32",
+   "id": "31",
    "metadata": {},
    "source": [
     "Get the elevation data."
@@ -310,7 +310,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "33",
+   "id": "32",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -319,7 +319,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "34",
+   "id": "33",
    "metadata": {},
    "source": [
     "Note that the elevation array is one-dimensional."
@@ -328,7 +328,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "35",
+   "id": "34",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -337,7 +337,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "36",
+   "id": "35",
    "metadata": {},
    "source": [
     "### Reshape data"
@@ -345,7 +345,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "37",
+   "id": "36",
    "metadata": {},
    "source": [
     "Like all BMI arrays, the elevations returned from the BMI `get_value` function are flattened.\n",
@@ -354,7 +354,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "38",
+   "id": "37",
    "metadata": {},
    "source": [
     "First, determine the dimensionality of the elevation variable."
@@ -363,7 +363,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "39",
+   "id": "38",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -373,7 +373,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "40",
+   "id": "39",
    "metadata": {},
    "source": [
     "Get the dimensions of the elevation data, first creating an array to store their values."
@@ -382,7 +382,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "41",
+   "id": "40",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -393,7 +393,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "42",
+   "id": "41",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -402,7 +402,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "43",
+   "id": "42",
    "metadata": {},
    "source": [
     "Reshape the elevation data, creating a new array."
@@ -411,7 +411,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "44",
+   "id": "43",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -421,7 +421,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "45",
+   "id": "44",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -430,7 +430,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "46",
+   "id": "45",
    "metadata": {},
    "source": [
     "## Visualize"
@@ -438,7 +438,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "47",
+   "id": "46",
    "metadata": {},
    "source": [
     "Let's visualize the elevation data as an image."
@@ -447,7 +447,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "48",
+   "id": "47",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -456,7 +456,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "49",
+   "id": "48",
    "metadata": {},
    "source": [
     "## Conclusion"
@@ -464,7 +464,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "50",
+   "id": "49",
    "metadata": {},
    "source": [
     "Last, call the BMI `finalize` function."
@@ -473,7 +473,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "51",
+   "id": "50",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -482,7 +482,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "52",
+   "id": "51",
    "metadata": {},
    "source": [
     "This demonstration of the BMI took a lot of code to reproduce a simple result.\n",
diff --git a/examples/topography.ipynb b/examples/topography.ipynb
index 1d7b9e8..f69b33a 100644
--- a/examples/topography.ipynb
+++ b/examples/topography.ipynb
@@ -19,7 +19,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "4",
+   "id": "2",
    "metadata": {},
    "source": [
     "## Fetch and load data"
@@ -27,7 +27,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "5",
+   "id": "3",
    "metadata": {},
    "source": [
     "Import the `Topography` class from the `bmi-topography` package:"
@@ -36,7 +36,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "6",
+   "id": "4",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -45,7 +45,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "7",
+   "id": "5",
    "metadata": {},
    "source": [
     "`Topography` downloads and stores SRTM data through the [OpenTopography](https://opentopography.org/) [REST API](https://portal.opentopography.org/apidocs/#/Public/getGlobalDem). OpenTopography is an NSF-supported project that provides open access to high-resolution topography data and services."
@@ -53,7 +53,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "8",
+   "id": "6",
    "metadata": {},
    "source": [
     "Create an instance of `Topography` using parameters to describe\n",
@@ -69,7 +69,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "9",
+   "id": "7",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -86,7 +86,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "10",
+   "id": "8",
    "metadata": {},
    "source": [
     "While this step sets up a call to the OpenTopography API, it doesn't download the data. Download the data by calling the `fetch` method:"
@@ -95,7 +95,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "11",
+   "id": "9",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -105,7 +105,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "12",
+   "id": "10",
    "metadata": {},
    "source": [
     "This step may take a few moments to run while the data are fetched from OpenTopography and downloaded."
@@ -113,7 +113,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "13",
+   "id": "11",
    "metadata": {},
    "source": [
     "The `fetch` method only downloads data; it doesn't load it into memory. Call the `load` method to open the downloaded  file and load it into an `xarray` DataArray:"
@@ -122,7 +122,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "14",
+   "id": "12",
    "metadata": {},
    "outputs": [],
    "source": [
@@ -132,7 +132,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "15",
+   "id": "13",
    "metadata": {},
    "source": [
     "Note that `load` calls `fetch`, so the latter can be omitted if the goal is the get the data into memory."
@@ -140,7 +140,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "16",
+   "id": "14",
    "metadata": {},
    "source": [
     "## Visualize"
@@ -148,7 +148,7 @@
   },
   {
    "cell_type": "markdown",
-   "id": "17",
+   "id": "15",
    "metadata": {},
    "source": [
     "Finally, let's visualize the downloaded elevation data."
@@ -157,7 +157,7 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "id": "18",
+   "id": "16",
    "metadata": {},
    "outputs": [],
    "source": [