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Consider adding subcommand to generate BLAST distance plots #4

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dhoogest opened this issue Dec 1, 2023 · 0 comments
Open

Consider adding subcommand to generate BLAST distance plots #4

dhoogest opened this issue Dec 1, 2023 · 0 comments

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@dhoogest
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dhoogest commented Dec 1, 2023

Currently there's a separate (internal) python package which prepares output from the classifer and presents as a plot of BLAST disatnces to query, grouped by taxon (see below for example). It may be a beneficial consolidation to implement this alongside the classifier, probably deprecating bokeh in favor of the more widely used (within UW anyway) plotly library.

Screen Shot 2023-12-01 at 1 04 12 PM
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