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MC.10.1.6+Orf1a:V627F+S:V1264L(55 seqs, >10 places) #2899

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xz-keg opened this issue Feb 17, 2025 · 3 comments
Open

MC.10.1.6+Orf1a:V627F+S:V1264L(55 seqs, >10 places) #2899

xz-keg opened this issue Feb 17, 2025 · 3 comments

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@xz-keg
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xz-keg commented Feb 17, 2025

From sars-cov-2-variants/lineage-proposals#2374

MC.10.1.6+G12832A,G2144T(Orf1a:V627F)+G25352T(S:V1264L)

GISAID query: G25352T, G12832A, G2144T
No. of seqs: 30(Germany 1 Italy 1 USA 28(MN,NY,CT,NJ,PA))

First: EPI_ISL_19639316, USA-NY, 2024-12-6
Latest: EPI_ISL_19727902, USA-NE, 2025-2-2

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@xz-keg
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xz-keg commented Feb 23, 2025

41, HI,VA,NE

@xz-keg xz-keg changed the title MC.10.1.6+Orf1a:V627F+S:V1264L(30 seqs, 7 places) MC.10.1.6+Orf1a:V627F+S:V1264L(41 seqs, 10 places) Feb 23, 2025
@FedeGueli
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FedeGueli commented Feb 23, 2025 •
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41, HI,VA,NE

Which query do use for this? i found only 28 with the query displayed in the proposal and instaead 41 with G12832A,G2144T,G25352T

scratch this dunno what was the issue with gisaid

@xz-keg
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xz-keg commented Mar 7, 2025

55, MD, DE

@xz-keg xz-keg changed the title MC.10.1.6+Orf1a:V627F+S:V1264L(41 seqs, 10 places) MC.10.1.6+Orf1a:V627F+S:V1264L(55 seqs, >10 places) Mar 7, 2025
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@xz-keg @FedeGueli