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XEC+Orf1a:A599T+S:A222V(74 seqs, >10 places, 7 with S:A688V) #2857

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xz-keg opened this issue Jan 7, 2025 · 1 comment
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XEC+Orf1a:A599T+S:A222V(74 seqs, >10 places, 7 with S:A688V) #2857

xz-keg opened this issue Jan 7, 2025 · 1 comment

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xz-keg commented Jan 7, 2025

From branch 45 of sars-cov-2-variants/lineage-proposals#2088

XEC+G2060A(Orf1a:A599T)+C22227T(S:A222V)

GISAID query: C22227T, G2060A,C18657T,-16461,-13338,-24376,-C186T,-G1274T,-C2110T,-25603
GISAID query for S:A688V sub-branch: C22227T, G2060A,C18657T,C23625T
No. of seqs: 50(USA 6(UT,LA,TX,CT, GBW from Netherlands) South Korea 1 Japan 1 France 2 Canada 40(AB))

First: EPI_ISL_19504396, Canada, 2024-10-5
Latest: EPI_ISL_19643478, USA-TX, 2024-12-12

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@xz-keg xz-keg mentioned this issue Jan 7, 2025
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xz-keg commented Jan 15, 2025

54, Canada-QC, South Korea

@xz-keg xz-keg changed the title XEC+Orf1a:A599T+S:A222V(50 seqs, 9 places, 3 with S:A688V) XEC+Orf1a:A599T+S:A222V(54 seqs, >10 places, 4 with S:A688V) Jan 15, 2025
@xz-keg xz-keg changed the title XEC+Orf1a:A599T+S:A222V(54 seqs, >10 places, 4 with S:A688V) XEC+Orf1a:A599T+S:A222V(63 seqs, >10 places, 7 with S:A688V) Feb 2, 2025
@xz-keg xz-keg changed the title XEC+Orf1a:A599T+S:A222V(63 seqs, >10 places, 7 with S:A688V) XEC+Orf1a:A599T+S:A222V(65 seqs, >10 places, 7 with S:A688V) Feb 9, 2025
@xz-keg xz-keg changed the title XEC+Orf1a:A599T+S:A222V(65 seqs, >10 places, 7 with S:A688V) XEC+Orf1a:A599T+S:A222V(68 seqs, >10 places, 7 with S:A688V) Feb 17, 2025
@xz-keg xz-keg changed the title XEC+Orf1a:A599T+S:A222V(68 seqs, >10 places, 7 with S:A688V) XEC+Orf1a:A599T+S:A222V(69 seqs, >10 places, 7 with S:A688V) Feb 23, 2025
@xz-keg xz-keg changed the title XEC+Orf1a:A599T+S:A222V(69 seqs, >10 places, 7 with S:A688V) XEC+Orf1a:A599T+S:A222V(71 seqs, >10 places, 7 with S:A688V) Feb 28, 2025
@xz-keg xz-keg changed the title XEC+Orf1a:A599T+S:A222V(71 seqs, >10 places, 7 with S:A688V) XEC+Orf1a:A599T+S:A222V(74 seqs, >10 places, 7 with S:A688V) Mar 7, 2025
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