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ERROR: Failed building wheel for spectrum #83

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JohnAtl opened this issue Mar 12, 2024 · 1 comment
Open

ERROR: Failed building wheel for spectrum #83

JohnAtl opened this issue Mar 12, 2024 · 1 comment

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@JohnAtl
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JohnAtl commented Mar 12, 2024

1. Describe the bug
Trying to install spectrum using pip install spectrum.

The following diagnostics are printed after listing satisfied dependencies, etc.

Building wheels for collected packages: spectrum
  Building wheel for spectrum (setup.py) ... error
  error: subprocess-exited-with-error
  
  × python setup.py bdist_wheel did not run successfully.
  │ exit code: 1
  ╰─> [102 lines of output]
      running bdist_wheel
      running build
      running build_py
      creating build
      creating build/lib.linux-x86_64-cpython-311
      creating build/lib.linux-x86_64-cpython-311/cpp
      copying src/cpp/__init__.py -> build/lib.linux-x86_64-cpython-311/cpp
      creating build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/__init__.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/arma.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/burg.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/cholesky.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/correlation.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/correlog.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/covar.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/criteria.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/datasets.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/eigen.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/eigenfre.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/errors.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/io.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/levinson.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/linalg.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/linear_prediction.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/lpc.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/minvar.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/modcovar.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/mtm.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/periodogram.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/psd.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/spectrogram.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/toeplitz.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/tools.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/transfer.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/waveform.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/window.py -> build/lib.linux-x86_64-cpython-311/spectrum
      copying src/spectrum/yulewalker.py -> build/lib.linux-x86_64-cpython-311/spectrum
      creating build/lib.linux-x86_64-cpython-311/spectrum/data
      copying src/spectrum/data/__init__.py -> build/lib.linux-x86_64-cpython-311/spectrum/data
      copying src/spectrum/data/DOLPHINS.wav -> build/lib.linux-x86_64-cpython-311/spectrum/data
      copying src/spectrum/data/sunspot.dat -> build/lib.linux-x86_64-cpython-311/spectrum/data
      copying src/spectrum/data/sunspot_monthly.dat -> build/lib.linux-x86_64-cpython-311/spectrum/data
      running build_ext
      building 'spectrum.mydpss' extension
      creating build/temp.linux-x86_64-cpython-311
      creating build/temp.linux-x86_64-cpython-311/src
      creating build/temp.linux-x86_64-cpython-311/src/cpp
      gcc -DNDEBUG -g -fwrapv -O3 -Wall -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fexceptions -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security -fstack-clash-protection -fcf-protection -g -ffile-prefix-map=/build/python/src=/usr/src/debug/python -flto=auto -ffat-lto-objects -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fexceptions -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security -fstack-clash-protection -fcf-protection -g -ffile-prefix-map=/build/python/src=/usr/src/debug/python -flto=auto -march=x86-64 -mtune=generic -O3 -pipe -fno-plt -fexceptions -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security -fstack-clash-protection -fcf-protection -g -ffile-prefix-map=/build/python/src=/usr/src/debug/python -flto=auto -fPIC -I/home/john/work/Sleep/.venv/include -I/usr/include/python3.11 -c src/cpp/mydpss.c -o build/temp.linux-x86_64-cpython-311/src/cpp/mydpss.o
      gcc -shared -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-z,pack-relative-relocs -flto=auto -Wl,-O1 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,-z,pack-relative-relocs -flto=auto build/temp.linux-x86_64-cpython-311/src/cpp/mydpss.o -L/usr/lib -o build/lib.linux-x86_64-cpython-311/spectrum/mydpss.cpython-311-x86_64-linux-gnu.so
      /home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
        warnings.warn(
      installing to build/bdist.linux-x86_64/wheel
      running install
      running install_lib
      Traceback (most recent call last):
        File "<string>", line 2, in <module>
        File "<pip-setuptools-caller>", line 34, in <module>
        File "/tmp/pip-install-m0hefuy1/spectrum_6a6864a0840744948dcafcee08223808/setup.py", line 19, in <module>
          setup(
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/__init__.py", line 108, in setup
          return distutils.core.setup(**attrs)
                 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup
          return run_commands(dist)
                 ^^^^^^^^^^^^^^^^^^
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands
          dist.run_commands()
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands
          self.run_command(cmd)
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/dist.py", line 1213, in run_command
          super().run_command(command)
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
          cmd_obj.run()
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/wheel/bdist_wheel.py", line 404, in run
          self.run_command("install")
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/_distutils/cmd.py", line 318, in run_command
          self.distribution.run_command(command)
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/dist.py", line 1213, in run_command
          super().run_command(command)
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
          cmd_obj.run()
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/command/install.py", line 68, in run
          return orig.install.run(self)
                 ^^^^^^^^^^^^^^^^^^^^^^
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/_distutils/command/install.py", line 709, in run
          self.run_command(cmd_name)
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/_distutils/cmd.py", line 318, in run_command
          self.distribution.run_command(command)
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/dist.py", line 1213, in run_command
          super().run_command(command)
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 987, in run_command
          cmd_obj.ensure_finalized()
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/_distutils/cmd.py", line 111, in ensure_finalized
          self.finalize_options()
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/command/install_lib.py", line 17, in finalize_options
          self.set_undefined_options('install',('install_layout','install_layout'))
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/_distutils/cmd.py", line 296, in set_undefined_options
          setattr(self, dst_option, getattr(src_cmd_obj, src_option))
                                    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
        File "/home/john/work/Sleep/.venv/lib/python3.11/site-packages/setuptools/_distutils/cmd.py", line 107, in __getattr__
          raise AttributeError(attr)
      AttributeError: install_layout. Did you mean: 'install_platlib'?
      [end of output]
  
  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for spectrum
  Running setup.py clean for spectrum
Failed to build spectrum
ERROR: Could not build wheels for spectrum, which is required to install pyproject.toml-based projects

2. To Reproduce
(EndeavourOS is basically Arch)
OS: EndeavourOS Linux x86_64
Kernel: 6.6.21-1-lts
Uptime: 4 days, 17 hours, 5 mins
Packages: 1022 (pacman), 34 (flatpak)
Shell: zsh 5.9
Resolution: 3840x2160, 2560x2880, 3840x2160
DE: GNOME 45.4
WM: Mutter
WM Theme: Adwaita
Theme: Adwaita [GTK2/3]
Icons: Qogir [GTK2/3]
Terminal: kitty
CPU: 13th Gen Intel i9-13900K (32) @ 5.500GHz
GPU: NVIDIA RTX A4500
GPU: Intel DG2 [Arc A380]
Memory: 12799MiB / 128507MiB

at 16:03:30 > python --version
Python 3.11.8

at 16:04:05 > gcc --version
gcc (GCC) 13.2.1 20230801

at 15:56:04 x pip install spectrum
Looking in indexes: https://pypi.org/simple, https://pypi.ngc.nvidia.com
Collecting spectrum
Downloading spectrum-0.8.1.tar.gz (230 kB)
@JohnAtl
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JohnAtl commented Mar 12, 2024

Looks like Python 3.12.2 fixed the issue.
Thanks!

@tczhangzhi tczhangzhi mentioned this issue Mar 28, 2024
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@JohnAtl