testconfig.yml

# Modules test will not try to import
skip:
# Cause errors and don't throw exceptions cleanly
- psutil.tests
- pandas.io.clipboard
- matplotlib.backends
- pbr.tests
- plotly.plotly
- bokeh.server.django
- bokeh.sampledata  # no bokeh_sampledata
- datatree # see issue #52 
- pyart # see issue #52
- pyqt # see issue #52
- wradlib # see issue #52
- xradar # see issue #52 
# Too many, or not necessary
- iris.tests
- cartopy.tests
- plotly.validators
- xarray.tests
- pyresample.test
- pyferret.eofanal
- ants.tests
- alembic.testing
- sqlalchemy.testing
- httpx
- sanic
- tests # random tests from black?
 # - cupy # Disable when testing locally
 # - cupyx # ditto
 # - nci_intake_catalogue # ditto
 # - wrf # Prints garbage at v1.3.2.5
- matplotlib.tests # No test data
- prometheus_client.twisted # No twisted
- pyface
- qt
- traits
- traitsui
- vtk
- pyparsing
- tensorflow_estimator
- acs_replica_intake  # can't load catalogue file
- access_nri_intake  # can't load catalogue file
- pip._vendor.chardet # encounters a null byte, doesn't seem to be an error
- pykrige # AttributeError: module 'scipy.linalg' has no attribute 'pinv2' -- rk4417
# for both hdbscan and cosima_cookbook see https://accessdev.nci.org.au/jenkins/job/conda/job/analysis3-unstable/1351/consoleFull
- hdbscan # test errors but can import
- cosima_cookbook  # test error 
  #- plotnine # can't import fails on "import matplotlib._contour as _contour" which seems to work otherwise
  #- nctoolkit # calls plotnine
- xgboost.spark ### Don't think we support spark as a parallel backend
- send2trash.mac ### Gadi is not a mac
- send2trash.win ### Nor is it windows
- attrdict ### Deprecated but still erroneously bought in by wavespectra - not used by anything else
- skimage.future.graph ### Thanks for raising a module error to tell me that you've moved this
- numba.core.rvsdg_frontend ### Not supported in Python3.10
- scipy._lib.array_api_compat.torch ### Don't support pytorch
- urllib3.contrib.emscripten ### Used for web browser integration and also experimental: https://urllib3.readthedocs.io/en/latest/reference/contrib/emscripten.html
- fugue_duckdb ### Optional backend not used by any package in analysis3
- fugue_ibis ### Optional backend not used by any package in analysis3
- fugue_polars ### Optional backend not used by any package in analysis3
- fugue_ray ### Optional backend not used by any package in analysis3
- fugue_spark ### Optional backend not used by any package in analysis3
- torch.onnx ### Prevent testing of _internal APIs
- torch.testing ### Prevent testing of _internal APIs
- torch.utils.benchmark ### Uses non-existent part of deprecated pkg_resources
- torch._inductor
- keras.src.backend ### Don't test Keras backends
- functorch ### This file has moved to under torch/_functorch. It is not public API.
- cupy ### ImportError (libnccl.so.2: cannot open shared object file

# Preload these modules before testing to avoid weird python issues
preload:
- pysal
- tables
- skimage.data
- sklearn
- sklearn.covariance
- sklearn.manifold
- stratify
- xarray
- setuptools.command.build_ext ### Strange issue with numba.pycc

# Allow loading, but pass exceptions. When exceptions no longer triggered
# can remove
exception:
- sqlalchemy.testing.suite
- zmq.green
- prometheus_client.twisted
- sqlalchemy.testing.suite
- zmq.backend.cffi
- sklearn.mixture
- matplotlib.tests
- metpy.io     # While Issue #21 unresolved
- metpy.plots  # While Issue #21 unresolved
- httpx
- sanic
- tensorflow.estimator
- tensorflow._api.v2.compat.v1.estimator
- tensorflow._api.v2.compat.v1.compat.v1.estimator
- tensorflow._api.v2.compat.v1.compat.v2.estimator
- tensorflow._api.v2.compat.v2.estimator
- tensorflow._api.v2.compat.v2.compat.v1.estimator
- tensorflow._api.v2.compat.v2.compat.v2.estimator
- tensorflow.compat.v1.estimator
- tensorflow.compat.v1.compat.v1.estimator
- tensorflow.compat.v1.compat.v2.estimator
- tensorflow.compat.v2.estimator
- tensorflow.compat.v2.compat.v1.estimator
- tensorflow.compat.v2.compat.v2.estimator
- pyparsing.diagrams
- pysal.explore.esda
- pysal.explore.segregation
- pysal.model.access