From c889ce124f7c7cb4c1c61bafd8aad04f3e51080c Mon Sep 17 00:00:00 2001 From: Zohaib Anwar Date: Tue, 21 May 2024 22:19:21 -0700 Subject: [PATCH] update production instance --- covidmvp_clinical_params.yaml | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/covidmvp_clinical_params.yaml b/covidmvp_clinical_params.yaml index 87a94762..1c3a47b1 100644 --- a/covidmvp_clinical_params.yaml +++ b/covidmvp_clinical_params.yaml @@ -1,15 +1,16 @@ -prefix: "covidmvp-2024-04-30" +prefix: "covidmvp-2024-05-21" mode: "reference" grouping_criteria: "lineage" viralai: true virusseq: true -virusseq_update: false +virusseq_update: true skip_classification: true skip_postprocessing: false skip_posting: true skip_harmonize: false start_date: "2020-01-01" -end_date: "2024-04-30" +end_date: "2024-05-21" metadata_source: "ViralAi_EpiCoV" metadata_config: "assets/metadata_conf/metadata.yaml" outdir: "results/covidmvp" +mutation_indexfile: "results/covidmvp/covidmvp-2024-05-13/MUTATION_INDEX/2024-05-13.index.tsv"