From bcbf0f6c07c135224cd892558722e70ad2137395 Mon Sep 17 00:00:00 2001 From: Mike Henry <11765982+mikemhenry@users.noreply.github.com> Date: Tue, 18 Apr 2023 14:01:56 -0700 Subject: [PATCH] Release 0.22.1 (#685) * update release notes * fix codecoverage * add module for testing coverage * add a few more args for coverage --- .github/workflows/CI.yml | 2 +- devtools/conda-envs/test_env.yaml | 1 + docs/releasehistory.rst | 12 ++++++++++-- 3 files changed, 12 insertions(+), 3 deletions(-) diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml index 7ff37b62..30c0e95b 100644 --- a/.github/workflows/CI.yml +++ b/.github/workflows/CI.yml @@ -95,7 +95,7 @@ jobs: shell: bash -l {0} run: | # pytest -v --cov=openmmtools --cov-report=xml --color=yes openmmtools/tests/ - nosetests openmmtools/tests --nocapture --verbosity=2 --with-timer --with-doctest -a '!slow' + nosetests openmmtools/tests --nocapture --cover-tests --with-coverage --cover-package=openmmtools --cover-xml --cover-xml-file=coverage.xml --verbosity=2 --with-timer --with-doctest -a '!slow' - name: CodeCov uses: codecov/codecov-action@v3 diff --git a/devtools/conda-envs/test_env.yaml b/devtools/conda-envs/test_env.yaml index be26db4e..0de42d05 100644 --- a/devtools/conda-envs/test_env.yaml +++ b/devtools/conda-envs/test_env.yaml @@ -27,6 +27,7 @@ dependencies: - nose-timer - pytest - pytest-cov + - coverage # docs - numpydoc diff --git a/docs/releasehistory.rst b/docs/releasehistory.rst index 0f7eecbb..c646e784 100644 --- a/docs/releasehistory.rst +++ b/docs/releasehistory.rst @@ -1,6 +1,14 @@ Release History *************** +0.22.1 - Bugfix release +======================= + +Bugfixes +-------- + +- Fixed issue where the error message thrown from openMM changed, so we need a case insensitive check. This was already fixed in most of the code base but one spot was missed. (PR `#684 `_) + 0.22.0 - pymbar 4 support and gentle equilibration ================================================== @@ -18,7 +26,7 @@ Bugfixes - Support for newer NetCDF versions (1.6 branch) by not using zlib compression for varying length variables. (PR `#654 `_). 0.21.5 - Bugfix release -====================== +======================= Changed behaviors ----------------- @@ -131,7 +139,7 @@ Cleanup - Remove leftover `six` imports and `xrange` (`#504 `_) 0.20.1 - Bugfix release -======================================== +======================= Enhancements ------------