python

usage: blib2openswath.py [-h] [--infile -i [-i ...]] [--fasta -f [-f ...]]
                         [--tol -t [-t ...]] [--mz_type -m [-m ...]]

Blib2OpenSwath: Convert spectral library from BLIB (Skyline) to OpenSwath
format

options:
  -h, --help            show this help message and exit
  --infile -i [-i ...]  The input spectral library file in BLIB format either
                        from Skyline or BiblioSpec output
  --fasta -f [-f ...]   Proteome database in fasta format for mapping peptides
                        sequences
  --tol -t [-t ...]     Library match tolerance in dalton (Da) for fragment
                        m/z annotation (INFO: The tolerance of 0.5 Da and 0.05
                        Da was set as default)
  --mz_type -m [-m ...]
                        Specify the type of fragment m/z values present in the
                        input spectral library (Ex: "average" or "mono")