From 80ec92939409f148190175831be9d520b191ba73 Mon Sep 17 00:00:00 2001 From: Timmy Huang Date: Wed, 4 Sep 2024 09:38:49 -0700 Subject: [PATCH] fix: underscore snakecase notation to hyphenated snakecase for diffexp-may-be-slow --- server/common/config/dataset_config.py | 2 +- server/data_anndata/anndata_adaptor.py | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/server/common/config/dataset_config.py b/server/common/config/dataset_config.py index 59307aa3c..feed7b448 100644 --- a/server/common/config/dataset_config.py +++ b/server/common/config/dataset_config.py @@ -176,7 +176,7 @@ def handle_diffexp(self, context): self.validate_correct_type_of_configuration_attribute("diffexp__top_n", int) data_adaptor = self.get_data_adaptor() - if self.diffexp__enable and data_adaptor.parameters.get("diffexp_may_be_slow", False): + if self.diffexp__enable and data_adaptor.parameters.get("diffexp-may-be-slow", False): context["messagefn"]( "CAUTION: due to the size of your dataset, " "running differential expression may take longer or fail." ) diff --git a/server/data_anndata/anndata_adaptor.py b/server/data_anndata/anndata_adaptor.py index 31e5398b5..aa20a05ff 100644 --- a/server/data_anndata/anndata_adaptor.py +++ b/server/data_anndata/anndata_adaptor.py @@ -211,7 +211,7 @@ def _validate_and_initialize(self): # heuristic n_values = self.data.shape[0] * self.data.shape[1] if (n_values > 1e8 and self.server_config.adaptor__anndata_adaptor__backed is True) or (n_values > 5e8): - self.parameters.update({"diffexp_may_be_slow": True}) + self.parameters.update({"diffexp-may-be-slow": True}) def _is_valid_layout(self, arr): """return True if this layout data is a valid array for front-end presentation: