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Can't launch the file in Docker [BUG] #2684

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xhli2 opened this issue Aug 9, 2024 · 0 comments
Open

Can't launch the file in Docker [BUG] #2684

xhli2 opened this issue Aug 9, 2024 · 0 comments
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@xhli2
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xhli2 commented Aug 9, 2024

Describe the bug
Hello ,I can launch the file in the env cellxgene by cellxgene launch te2.h5ad,
but when i use the docker ,i build the image docker build . -t cellxgene and run docker run -v "D:/data/for_model_data:/data" -p 5005:5005 cellxgene launch --host 0.0.0.0 /data/te2.h5ad but it return the error :

Upgrade check failed.

[cellxgene] Starting the CLI...
[cellxgene] Loading data from te2.h5ad, this may take a while...
Error: File not found or is inaccessible. File must be an .h5ad object. Please check your input and try again.

Additional how to stop the program besides ctrl C

@xhli2 xhli2 added the bug label Aug 9, 2024
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