testing.yml

name: Pytest
on: [push]
jobs:
  run:
    runs-on: ${{ matrix.os }}
    strategy:
      matrix:
        os: [ubuntu-latest, macos-latest, windows-latest]
    env:
      OS: ${{ matrix.os }}
      PYTHON: '3.10'
    steps:
    - uses: actions/checkout@v2
    - name: Setup Python
      uses: actions/setup-python@v2
      with:
        python-version: '3.10'
    - name: Install Dependencies
      run: |
        pip install --upgrade pip
        pip install -r requirements.txt
        pip install owslib geopy gempy==2.3.1 xmltodict pypdf mplstereonet scikit-image scipy rioxarray tqdm
    - name: Debug
      run: |
        ls -R  # List all files and directories recursively
        pwd    # Print the current working directory
    - name: Generate coverage report
      working-directory: ./tests
      run: |
        pip install pytest
        pip install pytest-cov
        pytest --cov=./ --cov-report=xml
    - name: Debug
      run: |
        ls -R  # List all files and directories recursively
        pwd    # Print the current working directory
    - name: Upload coverage to Codecov
      uses: codecov/codecov-action@v3
      with:
        token: ${{ secrets.CODECOV_TOKEN }}
        directory: ./
        #coverage/reports/
        env_vars: OS,PYTHON
        fail_ci_if_error: true
        files: coverage.xml
        #,./coverage2.xml,!./cache
        flags: unittests
        name: codecov-umbrella
        verbose: true