From 85742f96f7cacea84d3aa870eab3bad3b74cc8dc Mon Sep 17 00:00:00 2001 From: korikuzma Date: Tue, 26 Sep 2023 21:41:49 -0400 Subject: [PATCH] fix test fixtures --- tests/unit/test_query.py | 12 +++--------- 1 file changed, 3 insertions(+), 9 deletions(-) diff --git a/tests/unit/test_query.py b/tests/unit/test_query.py index b4ecf895..431013d8 100644 --- a/tests/unit/test_query.py +++ b/tests/unit/test_query.py @@ -311,6 +311,7 @@ def normalized_braf(): }, {"name": "ensembl_biotype", "type": "Extension", "value": "protein_coding"}, {"name": "strand", "type": "Extension", "value": "-"}, + {"name": "symbol_status", "type": "Extension", "value": "approved"}, ], } return core_models.Gene(**params) @@ -471,6 +472,7 @@ def normalized_abl1(): }, {"name": "ensembl_biotype", "type": "Extension", "value": "protein_coding"}, {"name": "strand", "type": "Extension", "value": "+"}, + {"name": "symbol_status", "type": "Extension", "value": "approved"}, ], } return core_models.Gene(**params) @@ -605,6 +607,7 @@ def normalized_p150(): "value": ["LOC107985297"], }, {"name": "strand", "type": "Extension", "value": "+"}, + {"name": "symbol_status", "type": "Extension", "value": "approved"}, ], } return core_models.Gene(**params) @@ -977,16 +980,7 @@ def normalized_ifnr(): "type": "Extension", }, {"name": "symbol_status", "value": "approved", "type": "Extension"}, - { - "name": "ncbi_gene_type", - "type": "Extension", - }, {"name": "symbol_status", "value": "approved", "type": "Extension"}, - { - "name": "associated_with", - "value": ["pubmed:1906174", "omim:147573", "pubmed:1193239"], - "type": "Extension", - }, {"name": "ncbi_gene_type", "type": "Extension", "value": "unknown"}, {"name": "hgnc_locus_type", "type": "Extension", "value": "unknown"}, {"name": "location_annotations", "type": "Extension", "value": ["16"]},