diff --git a/README.md b/README.md index da93784..d88e8d9 100644 --- a/README.md +++ b/README.md @@ -37,6 +37,8 @@ With `--no-contig-ec` option, you can skip the initial assembly error correction With `--no-scaffold-ec` option, YaHS will skip the scaffolding error check in each round. There will be no `*_r[0-9]{2}_break.agp` AGP output files. +With `--no-mem-check` option, the runtime memory check is disabled. When running out of memory, the scaffolding process will terminate immediately instead of try lower resolutions. + ## Generate HiC contact maps YaHS offers some auxiliary tools to help generating HiC contact maps for visualisation. A demo is provided in the bash script `scripts/run_yahs.sh`. To generate and visualise a HiC contact map, the following tools are required. diff --git a/yahs.c b/yahs.c index b29f317..a01c32b 100644 --- a/yahs.c +++ b/yahs.c @@ -41,7 +41,7 @@ #include "enzyme.h" #include "asset.h" -#define YAHS_VERSION "1.2a" +#define YAHS_VERSION "1.2a.1" #undef DEBUG_ERROR_BREAK #undef DEBUG_GRAPH_PRUNE