latent lik bug

brj1 · Feb 17, 2023 · 3151483 · 3151483
1 parent d700887
commit 3151483
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diff --git a/dist/BBD.addon.zip b/dist/BBD.addon.zip
diff --git a/src/bbd/distributions/LatencyPrior.java b/src/bbd/distributions/LatencyPrior.java
@@ -90,7 +90,7 @@ public double calculateLogP() {
         final double tMRCA = tree.getRoot().getDate();
         final double rate = reactivationRate - latencyRate;
         final double logRate = Math.log(rate);
-        final double tMRCAFactor = Math.log(rate * tMRCA);
+        final double tMRCAFactor = Math.exp(rate * tMRCA);
 
         for (final int i : taxonIndex) {
             double date = tree.getNode(i).getDate();