diff --git a/docs/version-specific/supported-software/0/3d-dna.md b/docs/version-specific/supported-software/0/3d-dna.md index 507467177..2830bde95 100644 --- a/docs/version-specific/supported-software/0/3d-dna.md +++ b/docs/version-specific/supported-software/0/3d-dna.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # 3d-dna 3D de novo assembly (3D DNA) pipeline @@ -7,3 +11,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``180922`` | ``-Python-2.7.15`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/0/3to2.md b/docs/version-specific/supported-software/0/3to2.md index 7492e4fd7..b61da8e04 100644 --- a/docs/version-specific/supported-software/0/3to2.md +++ b/docs/version-specific/supported-software/0/3to2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # 3to2 lib3to2 is a set of fixers that are intended to backport code written for Python version 3.x into Python version 2.x. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.1.1`` | ``-Python-2.7.12`` | ``foss/2016b`` ``1.1.1`` | ``-Python-2.7.12`` | ``intel/2016b`` ``1.1.1`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/0/4ti2.md b/docs/version-specific/supported-software/0/4ti2.md index 3e7ecb37c..c55d6f7a0 100644 --- a/docs/version-specific/supported-software/0/4ti2.md +++ b/docs/version-specific/supported-software/0/4ti2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # 4ti2 A software package for algebraic, geometric and combinatorial problems on linear spaces @@ -10,3 +14,6 @@ version | toolchain ``1.6.9`` | ``GCC/11.3.0`` ``1.6.9`` | ``GCC/8.2.0-2.31.1`` ``1.6.9`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/0/index.md b/docs/version-specific/supported-software/0/index.md index 8047ef088..91d20dff7 100644 --- a/docs/version-specific/supported-software/0/index.md +++ b/docs/version-specific/supported-software/0/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (0) +*0* - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [3d-dna](3d-dna.md) * [3to2](3to2.md) * [4ti2](4ti2.md) diff --git a/docs/version-specific/supported-software/a/ABAQUS.md b/docs/version-specific/supported-software/a/ABAQUS.md index ba3406048..7f5f39581 100644 --- a/docs/version-specific/supported-software/a/ABAQUS.md +++ b/docs/version-specific/supported-software/a/ABAQUS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ABAQUS Finite Element Analysis software for modeling, visualization and best-in-class implicit and explicit dynamics FEA. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``6.12.1`` | ``-linux-x86_64`` | ``system`` ``6.13.5`` | ``-linux-x86_64`` | ``system`` ``6.14.1`` | ``-linux-x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ABINIT.md b/docs/version-specific/supported-software/a/ABINIT.md index 28bc25319..0ae5b24ec 100644 --- a/docs/version-specific/supported-software/a/ABINIT.md +++ b/docs/version-specific/supported-software/a/ABINIT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ABINIT Abinit is a plane wave pseudopotential code for doing condensed phase electronic structure calculations using DFT. @@ -33,3 +37,6 @@ version | versionsuffix | toolchain ``9.6.2`` | | ``intel/2021a`` ``9.6.2`` | | ``intel/2021b`` ``9.6.2`` | | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ABRA2.md b/docs/version-specific/supported-software/a/ABRA2.md index 373865604..2b1ac5d6f 100644 --- a/docs/version-specific/supported-software/a/ABRA2.md +++ b/docs/version-specific/supported-software/a/ABRA2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ABRA2 Assembly Based ReAligner @@ -9,3 +13,6 @@ version | toolchain ``2.22`` | ``iccifort/2019.5.281`` ``2.23`` | ``GCC/10.2.0`` ``2.23`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ABRicate.md b/docs/version-specific/supported-software/a/ABRicate.md index bff51d8c2..4f225e2fb 100644 --- a/docs/version-specific/supported-software/a/ABRicate.md +++ b/docs/version-specific/supported-software/a/ABRicate.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ABRicate Mass screening of contigs for antimicrobial and virulence genes @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.9.9`` | ``-Perl-5.28.1`` | ``gompi/2019a`` ``0.9.9`` | | ``gompi/2019b`` ``1.0.0`` | | ``gompi/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ABySS.md b/docs/version-specific/supported-software/a/ABySS.md index 97bf19cd9..bde216083 100644 --- a/docs/version-specific/supported-software/a/ABySS.md +++ b/docs/version-specific/supported-software/a/ABySS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ABySS Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler @@ -16,3 +20,6 @@ version | toolchain ``2.1.5`` | ``foss/2019b`` ``2.2.5`` | ``foss/2020b`` ``2.3.7`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ACTC.md b/docs/version-specific/supported-software/a/ACTC.md index 9f5718921..c10e3a7cd 100644 --- a/docs/version-specific/supported-software/a/ACTC.md +++ b/docs/version-specific/supported-software/a/ACTC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ACTC ACTC converts independent triangles into triangle strips or fans. @@ -13,3 +17,6 @@ version | toolchain ``1.1`` | ``GCCcore/8.3.0`` ``1.1`` | ``GCCcore/9.3.0`` ``1.1`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ADDA.md b/docs/version-specific/supported-software/a/ADDA.md index 1afa9311f..adc205118 100644 --- a/docs/version-specific/supported-software/a/ADDA.md +++ b/docs/version-specific/supported-software/a/ADDA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ADDA ADDA is an open-source parallel implementation of the discrete dipole approximation, capable to simulate light scattering by particles of arbitrary shape and composition in a wide range of particle sizes. @@ -7,3 +11,6 @@ ADDA is an open-source parallel implementation of the discrete dipole approximat version | toolchain --------|---------- ``1.3b4`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ADF.md b/docs/version-specific/supported-software/a/ADF.md index 470d0851a..d14bf2c3c 100644 --- a/docs/version-specific/supported-software/a/ADF.md +++ b/docs/version-specific/supported-software/a/ADF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ADF ADF is a premium-quality quantum chemistry software package based on Density Functional Theory (DFT). @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``2014.11.r48287`` | | ``intel/2016a`` ``2016.101`` | | ``system`` ``2019.303`` | ``-intelmpi`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ADIOS.md b/docs/version-specific/supported-software/a/ADIOS.md index 493c7b5a1..941efe133 100644 --- a/docs/version-specific/supported-software/a/ADIOS.md +++ b/docs/version-specific/supported-software/a/ADIOS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ADIOS The Adaptable IO System (ADIOS) provides a simple, flexible way for scientists to describe the data in their code that may need to be written, read, or processed outside of the running simulation. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.13.1`` | ``-Python-2.7.15`` | ``foss/2019a`` ``1.13.1`` | ``-Python-3.8.2`` | ``foss/2020a`` ``20210804`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ADMIXTURE.md b/docs/version-specific/supported-software/a/ADMIXTURE.md index 9c34a6ba2..b49533a4d 100644 --- a/docs/version-specific/supported-software/a/ADMIXTURE.md +++ b/docs/version-specific/supported-software/a/ADMIXTURE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ADMIXTURE ADMIXTURE is a software tool for maximum likelihood estimation of individual ancestries from multilocus SNP genotype datasets. It uses the same statistical model as STRUCTURE but calculates estimates much more rapidly using a fast numerical optimization algorithm. @@ -7,3 +11,6 @@ ADMIXTURE is a software tool for maximum likelihood estimation of individual anc version | toolchain --------|---------- ``1.3.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ADOL-C.md b/docs/version-specific/supported-software/a/ADOL-C.md index 4801548ba..7db55dae7 100644 --- a/docs/version-specific/supported-software/a/ADOL-C.md +++ b/docs/version-specific/supported-software/a/ADOL-C.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ADOL-C The package ADOL-C (Automatic Differentiation by OverLoading in C++) facilitates the evaluation of first and higher derivatives of vector functions that are defined by computer programs written in C or C++. The resulting derivative evaluation routines may be called from C/C++, Fortran, or any other language that can be linked with C. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.7.0`` | ``gompi/2019a`` ``2.7.2`` | ``gompi/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AEDT.md b/docs/version-specific/supported-software/a/AEDT.md index 61954f91c..20fa3789a 100644 --- a/docs/version-specific/supported-software/a/AEDT.md +++ b/docs/version-specific/supported-software/a/AEDT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AEDT The Ansys Electronics Desktop (AEDT) is a platform that enables true electronics system design. AEDT provides access to the Ansys gold-standard electromagnetics simulation solutions such as Ansys HFSS, Ansys Maxwell, Ansys Q3D Extractor, Ansys SIwave, and Ansys Icepak using electrical CAD (ECAD) and mechanical CAD (MCAD) workflows. @@ -7,3 +11,6 @@ The Ansys Electronics Desktop (AEDT) is a platform that enables true electronics version | toolchain --------|---------- ``2024R1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AFNI.md b/docs/version-specific/supported-software/a/AFNI.md index 076856008..3271862fc 100644 --- a/docs/version-specific/supported-software/a/AFNI.md +++ b/docs/version-specific/supported-software/a/AFNI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AFNI AFNI is a set of C programs for processing, analyzing, and displaying functional MRI (FMRI) data - a technique for mapping human brain activity. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``19.0.01`` | ``-Python-2.7.14`` | ``intel/2017b`` ``20160329`` | ``-Python-2.7.11`` | ``intel/2016a`` ``24.0.02`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AGAT.md b/docs/version-specific/supported-software/a/AGAT.md index 4a6888d20..9addc05f1 100644 --- a/docs/version-specific/supported-software/a/AGAT.md +++ b/docs/version-specific/supported-software/a/AGAT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AGAT AGAT: Another GTF/GFF Analysis Toolkit. Suite of tools to handle gene annotations in any GTF/GFF format. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.9.2`` | ``GCC/11.2.0`` ``1.1.0`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AGFusion.md b/docs/version-specific/supported-software/a/AGFusion.md index 359e030d0..475b4a66e 100644 --- a/docs/version-specific/supported-software/a/AGFusion.md +++ b/docs/version-specific/supported-software/a/AGFusion.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AGFusion AGFusion is a python package for annotating gene fusions from the human or mouse genomes. @@ -7,3 +11,6 @@ AGFusion is a python package for annotating gene fusions from the human or mous version | versionsuffix | toolchain --------|---------------|---------- ``1.2`` | ``-Python-3.7.2`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AGeNT.md b/docs/version-specific/supported-software/a/AGeNT.md index cfa4a2531..587a7cca8 100644 --- a/docs/version-specific/supported-software/a/AGeNT.md +++ b/docs/version-specific/supported-software/a/AGeNT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AGeNT The Agilent Genomics NextGen Toolkit (AGeNT) is a Java-based software module that processes the read sequences from targeted high-throughput sequencing data generated by sequencing Agilent SureSelect and HaloPlex libraries. The Trimmer utility of the AGeNT module processes the read sequences to identify and remove the adaptor sequences and extracts dual molecular barcodes (for SureSelect XT HS2). The LocatIt utility of the AGeNT module processes the Molecular Barcode (MBC) information from HaloPlex HS, SureSelect XT HS, and SureSelect XT HS2 Illumina sequencing runs with options to either mark or merge duplicate reads and output in BAM file format. The Illumina InterOp libraries are a set of common routines used for reading InterOp metric files produced by Illumina sequencers including NextSeq 1k/2k. These libraries are backwards compatible and capable of supporting prior releases of the software, with one exception: GA systems have been excluded. @@ -7,3 +11,6 @@ The Agilent Genomics NextGen Toolkit (AGeNT) is a Java-based software module tha version | toolchain --------|---------- ``3.0.6`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AICSImageIO.md b/docs/version-specific/supported-software/a/AICSImageIO.md index 3c36769ef..81241ee4e 100644 --- a/docs/version-specific/supported-software/a/AICSImageIO.md +++ b/docs/version-specific/supported-software/a/AICSImageIO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AICSImageIO Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Pure Python @@ -7,3 +11,6 @@ Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in P version | toolchain --------|---------- ``4.14.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AIMAll.md b/docs/version-specific/supported-software/a/AIMAll.md index 2501302cf..205e7fdd2 100644 --- a/docs/version-specific/supported-software/a/AIMAll.md +++ b/docs/version-specific/supported-software/a/AIMAll.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AIMAll AIMAll is an easy to use, accurate, reliable and efficient quantum chemistry software package for performing comprehensive, quantitative and visual QTAIM analyses of molecular systems - starting from molecular wavefunction data. @@ -7,3 +11,6 @@ AIMAll is an easy to use, accurate, reliable and efficient quantum chemistry sof version | versionsuffix | toolchain --------|---------------|---------- ``19.10.12`` | ``-linux_64bit`` | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ALADIN.md b/docs/version-specific/supported-software/a/ALADIN.md index 076ea3c9e..8363ee9ce 100644 --- a/docs/version-specific/supported-software/a/ALADIN.md +++ b/docs/version-specific/supported-software/a/ALADIN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ALADIN ALADIN was entirely built on the notion of compatibility with its mother system, IFS/ARPEG. The latter, a joint development between the European Centre for Medium-Range Weather Forecasts (ECMWF) and Meteo-France, was only meant to consider global Numerical Weather Prediction applications; hence the idea, for ALADIN, to complement the IFS/ARPEGE project with a limited area model (LAM) version, while keeping the differences between the two softwares as small as possible. @@ -7,3 +11,6 @@ ALADIN was entirely built on the notion of compatibility with its mother system, version | toolchain --------|---------- ``36t1_op2bf1`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ALAMODE.md b/docs/version-specific/supported-software/a/ALAMODE.md index f00728537..8a7bcf480 100644 --- a/docs/version-specific/supported-software/a/ALAMODE.md +++ b/docs/version-specific/supported-software/a/ALAMODE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ALAMODE ALAMODE is an open source software designed for analyzing lattice anharmonicity and lattice thermal conductivity of solids. By using an external DFT package such as VASP and Quantum ESPRESSO, you can extract harmonic and anharmonic force constants straightforwardly with ALAMODE. Using the calculated anharmonic force constants, you can also estimate lattice thermal conductivity, phonon linewidth, and other anharmonic phonon properties from first principles. @@ -7,3 +11,6 @@ ALAMODE is an open source software designed for analyzing lattice anharmonicity version | toolchain --------|---------- ``1.4.2`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ALFA.md b/docs/version-specific/supported-software/a/ALFA.md index f17011b48..15b029d1a 100644 --- a/docs/version-specific/supported-software/a/ALFA.md +++ b/docs/version-specific/supported-software/a/ALFA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ALFA ALFA provides a global overview of features distribution composing NGS dataset(s). Given a set of aligned reads (BAM files) and an annotation file (GTF format), the tool produces plots of the raw and normalized distributions of those reads among genomic categories (stop codon, 5'-UTR, CDS, intergenic, etc.) and biotypes (protein coding genes, miRNA, tRNA, etc.). Whatever the sequencing technique, whatever the organism. @@ -7,3 +11,6 @@ ALFA provides a global overview of features distribution composing NGS dataset(s version | versionsuffix | toolchain --------|---------------|---------- ``1.1.1`` | ``-Python-3.7.2`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ALL.md b/docs/version-specific/supported-software/a/ALL.md index 8d4db4bd5..127a4af28 100644 --- a/docs/version-specific/supported-software/a/ALL.md +++ b/docs/version-specific/supported-software/a/ALL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ALL A Load Balancing Library (ALL) aims to provide an easy way to include dynamic domain-based load balancing into particle based simulation codes. The library is developed in the Simulation Laboratory Molecular Systems of the Jülich Supercomputing Centre at Forschungszentrum Jülich. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.9.2`` | ``foss/2022b`` ``0.9.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ALLPATHS-LG.md b/docs/version-specific/supported-software/a/ALLPATHS-LG.md index 0074570eb..62895a6e6 100644 --- a/docs/version-specific/supported-software/a/ALLPATHS-LG.md +++ b/docs/version-specific/supported-software/a/ALLPATHS-LG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ALLPATHS-LG ALLPATHS-LG, the new short read genome assembler. @@ -7,3 +11,6 @@ ALLPATHS-LG, the new short read genome assembler. version | toolchain --------|---------- ``52488`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ALPS.md b/docs/version-specific/supported-software/a/ALPS.md index 667583f31..db6638e5f 100644 --- a/docs/version-specific/supported-software/a/ALPS.md +++ b/docs/version-specific/supported-software/a/ALPS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ALPS The ALPS project (Algorithms and Libraries for Physics Simulations) is an open source effort aiming at providing high-end simulation codes for strongly correlated quantum mechanical systems as well as C++ libraries for simplifying the development of such code. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.2.b4`` | ``-Python-2.7.11`` | ``intel/2016a`` ``2.3.0`` | ``-Python-2.7.12`` | ``foss/2016b`` ``2.3.0`` | ``-Python-3.5.2`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AMAPVox.md b/docs/version-specific/supported-software/a/AMAPVox.md index 57fda9c37..04dab27a6 100644 --- a/docs/version-specific/supported-software/a/AMAPVox.md +++ b/docs/version-specific/supported-software/a/AMAPVox.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AMAPVox LiDAR data voxelisation software @@ -7,3 +11,6 @@ LiDAR data voxelisation software version | versionsuffix | toolchain --------|---------------|---------- ``1.9.4`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AMD-LibM.md b/docs/version-specific/supported-software/a/AMD-LibM.md index 346bd8a38..a3fd1622e 100644 --- a/docs/version-specific/supported-software/a/AMD-LibM.md +++ b/docs/version-specific/supported-software/a/AMD-LibM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AMD-LibM AMD LibM is a software library containing a collection of basic math functions optimized for x86-64 processor based machines. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.2.2`` | ``GCC/7.3.0-2.30`` ``3.6.0-4`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AMD-RNG.md b/docs/version-specific/supported-software/a/AMD-RNG.md index 5c35bdadf..31bf3fb27 100644 --- a/docs/version-specific/supported-software/a/AMD-RNG.md +++ b/docs/version-specific/supported-software/a/AMD-RNG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AMD-RNG AMD Random Number Generator Library is a pseudorandom number generator library. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0`` | ``GCC/7.3.0-2.30`` ``2.2-4`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AMD-SecureRNG.md b/docs/version-specific/supported-software/a/AMD-SecureRNG.md index 18ea0abd3..a1431b9ab 100644 --- a/docs/version-specific/supported-software/a/AMD-SecureRNG.md +++ b/docs/version-specific/supported-software/a/AMD-SecureRNG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AMD-SecureRNG The AMD Secure Random Number Generator (RNG) is a library that provides APIs to access the cryptographically secure random numbers generated by AMD’s hardware-based random number generator implementation. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0`` | ``GCC/7.3.0-2.30`` ``2.2-4`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AMD-uProf.md b/docs/version-specific/supported-software/a/AMD-uProf.md index 51913e22e..2f5d71345 100644 --- a/docs/version-specific/supported-software/a/AMD-uProf.md +++ b/docs/version-specific/supported-software/a/AMD-uProf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AMD-uProf AMD uProf is a performance analysis tool for applications running on Windows, Linux & FreeBSD operating systems. It allows developers to better understand the runtime performance of their application and to identify ways to improve its performance. @@ -9,3 +13,6 @@ version | toolchain ``3.4.502`` | ``system`` ``3.5.671`` | ``system`` ``4.1.424`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AMGX.md b/docs/version-specific/supported-software/a/AMGX.md index 7c2c93fc1..4cecc80db 100644 --- a/docs/version-specific/supported-software/a/AMGX.md +++ b/docs/version-specific/supported-software/a/AMGX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AMGX Distributed multigrid linear solver library on GPU @@ -7,3 +11,6 @@ Distributed multigrid linear solver library on GPU version | versionsuffix | toolchain --------|---------------|---------- ``2.4.0`` | ``-CUDA-12.1.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AMICA.md b/docs/version-specific/supported-software/a/AMICA.md index a0c6c1db4..172959c3a 100644 --- a/docs/version-specific/supported-software/a/AMICA.md +++ b/docs/version-specific/supported-software/a/AMICA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AMICA Code for AMICA: Adaptive Mixture ICA with shared components @@ -7,3 +11,6 @@ Code for AMICA: Adaptive Mixture ICA with shared components version | toolchain --------|---------- ``2024.1.19`` | ``intel/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AMOS.md b/docs/version-specific/supported-software/a/AMOS.md index f6f1025c7..fc3651754 100644 --- a/docs/version-specific/supported-software/a/AMOS.md +++ b/docs/version-specific/supported-software/a/AMOS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AMOS The AMOS consortium is committed to the development of open-source whole genome assembly software @@ -9,3 +13,6 @@ version | toolchain ``3.1.0`` | ``foss/2018b`` ``3.1.0`` | ``foss/2021b`` ``3.1.0`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AMPHORA2.md b/docs/version-specific/supported-software/a/AMPHORA2.md index 9d1cd22fd..2d2db3f92 100644 --- a/docs/version-specific/supported-software/a/AMPHORA2.md +++ b/docs/version-specific/supported-software/a/AMPHORA2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AMPHORA2 An Automated Phylogenomic Inference Pipeline for Bacterial and Archaeal Sequences. @@ -7,3 +11,6 @@ An Automated Phylogenomic Inference Pipeline for Bacterial and Archaeal Sequence version | versionsuffix | toolchain --------|---------------|---------- ``20190730`` | ``-Java-13-pthreads-avx2`` | ``gompi/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AMPL-MP.md b/docs/version-specific/supported-software/a/AMPL-MP.md index dbdaab335..1a7e69905 100644 --- a/docs/version-specific/supported-software/a/AMPL-MP.md +++ b/docs/version-specific/supported-software/a/AMPL-MP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AMPL-MP An open-source library for mathematical programming. @@ -7,3 +11,6 @@ An open-source library for mathematical programming. version | toolchain --------|---------- ``3.1.0`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AMPtk.md b/docs/version-specific/supported-software/a/AMPtk.md index f95eb6b93..aaa97e699 100644 --- a/docs/version-specific/supported-software/a/AMPtk.md +++ b/docs/version-specific/supported-software/a/AMPtk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AMPtk AMPtk is a series of scripts to process NGS amplicon data using USEARCH and VSEARCH, it can also be used to process any NGS amplicon data and includes databases setup for analysis of fungal ITS, fungal LSU, bacterial 16S, and insect COI amplicons. @@ -7,3 +11,6 @@ AMPtk is a series of scripts to process NGS amplicon data using USEARCH and VSEA version | toolchain --------|---------- ``1.5.4`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AMRFinderPlus.md b/docs/version-specific/supported-software/a/AMRFinderPlus.md index cc8a15f2e..cbde4f4ae 100644 --- a/docs/version-specific/supported-software/a/AMRFinderPlus.md +++ b/docs/version-specific/supported-software/a/AMRFinderPlus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AMRFinderPlus This software and the accompanying database are designed to find acquired antimicrobial resistance genes and some point mutations in protein or assembled nucleotide sequences. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.11.18`` | ``gompi/2021b`` ``3.11.18`` | ``gompi/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AMS.md b/docs/version-specific/supported-software/a/AMS.md index 18721a0ba..3dc63e9d7 100644 --- a/docs/version-specific/supported-software/a/AMS.md +++ b/docs/version-specific/supported-software/a/AMS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AMS The Amsterdam Modeling Suite (AMS) provides a comprehensive set of modules for computational chemistry and materials science, from quantum mechanics to fluid thermodynamics. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2022.102`` | ``-intelmpi`` | ``iimpi/2021b`` ``2023.101`` | ``-intelmpi`` | ``iimpi/2022a`` ``2023.104`` | ``-intelmpi`` | ``iimpi/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ANGEL.md b/docs/version-specific/supported-software/a/ANGEL.md index f44ae7a40..743a8d07f 100644 --- a/docs/version-specific/supported-software/a/ANGEL.md +++ b/docs/version-specific/supported-software/a/ANGEL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ANGEL ANGEL: Robust Open Reading Frame prediction @@ -7,3 +11,6 @@ ANGEL: Robust Open Reading Frame prediction version | versionsuffix | toolchain --------|---------------|---------- ``3.0`` | ``-Python-3.7.2`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ANIcalculator.md b/docs/version-specific/supported-software/a/ANIcalculator.md index b1e608546..1316e6692 100644 --- a/docs/version-specific/supported-software/a/ANIcalculator.md +++ b/docs/version-specific/supported-software/a/ANIcalculator.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ANIcalculator This tool will calculate the bidirectional average nucleotide identity (gANI) and Alignment Fraction (AF) between two genomes. Required input is the full path to the fna file (nucleotide sequence of genes in fasta format) of each query genome. Either the rRNA and tRNA genes can be excluded, or provided in a list with the -ignoreList option. This is necessary as the presence of tRNA and/or rRNA genes in the fna will artificially inflate the ANI. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0`` | ``GCCcore/10.3.0`` ``1.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ANSYS.md b/docs/version-specific/supported-software/a/ANSYS.md index adf448c12..689544814 100644 --- a/docs/version-specific/supported-software/a/ANSYS.md +++ b/docs/version-specific/supported-software/a/ANSYS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ANSYS ANSYS simulation software enables organizations to confidently predict how their products will operate in the real world. We believe that every product is a promise of something greater. @@ -9,3 +13,6 @@ version | toolchain ``15.0`` | ``system`` ``2022R2`` | ``system`` ``2023R1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ANSYS_CFD.md b/docs/version-specific/supported-software/a/ANSYS_CFD.md index b7610145f..c851457f4 100644 --- a/docs/version-specific/supported-software/a/ANSYS_CFD.md +++ b/docs/version-specific/supported-software/a/ANSYS_CFD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ANSYS_CFD ANSYS computational fluid dynamics (CFD) simulation software allows you to predict, with confidence, the impact of fluid flows on your product throughout design and manufacturing as well as during end use. ANSYS renowned CFD analysis tools include the widely used and well-validated ANSYS Fluent and ANSYS CFX. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``16.2`` | ``system`` ``17.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ANTIC.md b/docs/version-specific/supported-software/a/ANTIC.md index 4ad3b11e1..3ff178f71 100644 --- a/docs/version-specific/supported-software/a/ANTIC.md +++ b/docs/version-specific/supported-software/a/ANTIC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ANTIC Antic is an algebraic number theory library. @@ -7,3 +11,6 @@ Antic is an algebraic number theory library. version | toolchain --------|---------- ``0.2.5`` | ``gfbf/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ANTLR.md b/docs/version-specific/supported-software/a/ANTLR.md index 834ba57c5..51c411514 100644 --- a/docs/version-specific/supported-software/a/ANTLR.md +++ b/docs/version-specific/supported-software/a/ANTLR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ANTLR ANTLR, ANother Tool for Language Recognition, (formerly PCCTS) is a language tool that provides a framework for constructing recognizers, compilers, and translators from grammatical descriptions containing Java, C#, C++, or Python actions. @@ -23,3 +27,6 @@ version | versionsuffix | toolchain ``2.7.7`` | ``-Python-2.7.14`` | ``intel/2017b`` ``2.7.7`` | | ``intel/2017b`` ``2.7.7`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ANTs.md b/docs/version-specific/supported-software/a/ANTs.md index 6a94cee26..d4ff403b1 100644 --- a/docs/version-specific/supported-software/a/ANTs.md +++ b/docs/version-specific/supported-software/a/ANTs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ANTs ANTs extracts information from complex datasets that include imaging. ANTs is useful for managing, interpreting and visualizing multidimensional data. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``2.3.2`` | ``-Python-3.7.4`` | ``foss/2019b`` ``2.3.5`` | | ``foss/2021a`` ``2.5.0`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AOCC.md b/docs/version-specific/supported-software/a/AOCC.md index 9c6497ef4..07dd54687 100644 --- a/docs/version-specific/supported-software/a/AOCC.md +++ b/docs/version-specific/supported-software/a/AOCC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AOCC AMD Optimized C/C++ & Fortran compilers (AOCC) based on LLVM 11.0 @@ -18,3 +22,6 @@ version | toolchain ``4.0.0`` | ``GCCcore/11.3.0`` ``4.0.0`` | ``GCCcore/12.2.0`` ``4.0.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AOFlagger.md b/docs/version-specific/supported-software/a/AOFlagger.md index d0e552a37..9b50b4205 100644 --- a/docs/version-specific/supported-software/a/AOFlagger.md +++ b/docs/version-specific/supported-software/a/AOFlagger.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AOFlagger The AOFlagger is a tool that can find and remove radio-frequency interference (RFI) in radio astronomical observations. It can make use of Lua scripts to make flagging strategies flexible, and the tools are applicable to a wide set of telescopes. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.4.0`` | ``foss/2022a`` ``3.4.0`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AOMP.md b/docs/version-specific/supported-software/a/AOMP.md index a0ad3a813..b95f3fb73 100644 --- a/docs/version-specific/supported-software/a/AOMP.md +++ b/docs/version-specific/supported-software/a/AOMP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AOMP AMD fork of LLVM, setup for OpenMP offloading to Accelerators @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``13.0-2`` | ``GCCcore/10.2.0`` ``13.0-2`` | ``gcccuda/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/APBS.md b/docs/version-specific/supported-software/a/APBS.md index 0ca06b4ef..3ff839557 100644 --- a/docs/version-specific/supported-software/a/APBS.md +++ b/docs/version-specific/supported-software/a/APBS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # APBS APBS is a software package for modeling biomolecular solvation through solution of the Poisson-Boltzmann equation (PBE), one of the most popular continuum models for describing electrostatic interactions between molecular solutes in salty, aqueous media. @@ -7,3 +11,6 @@ APBS is a software package for modeling biomolecular solvation through solutio version | versionsuffix | toolchain --------|---------------|---------- ``1.4`` | ``-linux-static-x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/APR-util.md b/docs/version-specific/supported-software/a/APR-util.md index 7b730a2ba..6e2259e70 100644 --- a/docs/version-specific/supported-software/a/APR-util.md +++ b/docs/version-specific/supported-software/a/APR-util.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # APR-util Apache Portable Runtime (APR) util libraries. @@ -16,3 +20,6 @@ version | toolchain ``1.6.1`` | ``GCCcore/9.3.0`` ``1.6.1`` | ``iomkl/2018a`` ``1.6.3`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/APR.md b/docs/version-specific/supported-software/a/APR.md index 094fec40f..9e7e4595c 100644 --- a/docs/version-specific/supported-software/a/APR.md +++ b/docs/version-specific/supported-software/a/APR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # APR Apache Portable Runtime (APR) libraries. @@ -16,3 +20,6 @@ version | toolchain ``1.7.0`` | ``GCCcore/8.2.0`` ``1.7.0`` | ``GCCcore/9.3.0`` ``1.7.4`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ARAGORN.md b/docs/version-specific/supported-software/a/ARAGORN.md index 80863ad7c..1b3726a49 100644 --- a/docs/version-specific/supported-software/a/ARAGORN.md +++ b/docs/version-specific/supported-software/a/ARAGORN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ARAGORN a program to detect tRNA genes and tmRNA genes in nucleotide sequences @@ -9,3 +13,6 @@ version | toolchain ``1.2.38`` | ``foss/2016b`` ``1.2.38`` | ``iccifort/2019.5.281`` ``1.2.41`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ARCH.md b/docs/version-specific/supported-software/a/ARCH.md index f51939294..e5415877f 100644 --- a/docs/version-specific/supported-software/a/ARCH.md +++ b/docs/version-specific/supported-software/a/ARCH.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ARCH Autoregressive Conditional Heteroskedasticity (ARCH) and other tools for financial econometrics, written in Python (with Cython and/or Numba used to improve performance). @@ -7,3 +11,6 @@ Autoregressive Conditional Heteroskedasticity (ARCH) and other tools for financi version | versionsuffix | toolchain --------|---------------|---------- ``4.5.0`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ARGoS.md b/docs/version-specific/supported-software/a/ARGoS.md index 8491d1296..eb74a49ee 100644 --- a/docs/version-specific/supported-software/a/ARGoS.md +++ b/docs/version-specific/supported-software/a/ARGoS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ARGoS A parallel, multi-engine simulator for heterogeneous swarm robotics @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.0.0-beta53`` | ``-Lua-5.2.4`` | ``foss/2018b`` ``3.0.0-beta59`` | | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ARPACK++.md b/docs/version-specific/supported-software/a/ARPACK++.md index b44886a15..082cce85d 100644 --- a/docs/version-specific/supported-software/a/ARPACK++.md +++ b/docs/version-specific/supported-software/a/ARPACK++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ARPACK++ Arpackpp is a C++ interface to the ARPACK Fortran package, which implements the implicit restarted Arnoldi method for iteratively solving large-scale sparse eigenvalue problems. @@ -7,3 +11,6 @@ Arpackpp is a C++ interface to the ARPACK Fortran package, which implements the version | toolchain --------|---------- ``2018.03.26`` | ``foss/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ART.md b/docs/version-specific/supported-software/a/ART.md index 913d24527..36d81dea2 100644 --- a/docs/version-specific/supported-software/a/ART.md +++ b/docs/version-specific/supported-software/a/ART.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ART ART is a set of simulation tools to generate synthetic next-generation sequencing reads" @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2016.06.05`` | ``GCCcore/6.4.0`` ``2016.06.05`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ARTS.md b/docs/version-specific/supported-software/a/ARTS.md index eda1b1f8d..34cde5377 100644 --- a/docs/version-specific/supported-software/a/ARTS.md +++ b/docs/version-specific/supported-software/a/ARTS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ARTS ARTS is a radiative transfer model for the millimeter and sub-millimeter spectral range. There are a number of models mostly developed explicitly for the different sensors. @@ -7,3 +11,6 @@ ARTS is a radiative transfer model for the millimeter and sub-millimeter spectr version | toolchain --------|---------- ``2.2.64`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ARWEN.md b/docs/version-specific/supported-software/a/ARWEN.md index 5f61c0a66..f56829591 100644 --- a/docs/version-specific/supported-software/a/ARWEN.md +++ b/docs/version-specific/supported-software/a/ARWEN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ARWEN ARWEN, tRNA detection in metazoan mitochondrial sequences @@ -7,3 +11,6 @@ ARWEN, tRNA detection in metazoan mitochondrial sequences version | toolchain --------|---------- ``1.2.3`` | ``GCCcore/7.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ASAP.md b/docs/version-specific/supported-software/a/ASAP.md index 1ca078433..5ae8d8097 100644 --- a/docs/version-specific/supported-software/a/ASAP.md +++ b/docs/version-specific/supported-software/a/ASAP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ASAP ASAP focuses on fast and fluid image viewing with an easy-to-use interface for making annotations. It consists of two main components: an IO library for reading and writing multi-resolution images and a viewer component for visualizing such images. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.0`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``2.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ASAP3.md b/docs/version-specific/supported-software/a/ASAP3.md index e0c6cb954..969927974 100644 --- a/docs/version-specific/supported-software/a/ASAP3.md +++ b/docs/version-specific/supported-software/a/ASAP3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ASAP3 ASAP is a calculator for doing large-scale classical molecular dynamics within the Campos Atomic Simulation Environment (ASE). @@ -23,3 +27,6 @@ version | versionsuffix | toolchain ``3.13.2`` | | ``foss/2023a`` ``3.13.3`` | | ``foss/2023a`` ``3.13.3`` | | ``intel/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ASCAT.md b/docs/version-specific/supported-software/a/ASCAT.md index abd872d1f..254515b9c 100644 --- a/docs/version-specific/supported-software/a/ASCAT.md +++ b/docs/version-specific/supported-software/a/ASCAT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ASCAT ASCAT is a method to derive copy number profiles of tumor cells, accounting for normal cell admixture and tumor aneuploidy. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.1.2`` | ``-R-4.2.1`` | ``foss/2022a`` ``3.1.2`` | ``-R-4.2.2`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ASE.md b/docs/version-specific/supported-software/a/ASE.md index 45e46dc07..ae15c76e5 100644 --- a/docs/version-specific/supported-software/a/ASE.md +++ b/docs/version-specific/supported-software/a/ASE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ASE ASE is a python package providing an open source Atomic Simulation Environment in the Python scripting language. @@ -60,3 +64,6 @@ version | versionsuffix | toolchain ``3.22.1`` | | ``intel/2021b`` ``3.22.1`` | | ``intel/2022a`` ``3.9.1.4567`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ASF-SearchAPI.md b/docs/version-specific/supported-software/a/ASF-SearchAPI.md index cea46c02c..260cd9a80 100644 --- a/docs/version-specific/supported-software/a/ASF-SearchAPI.md +++ b/docs/version-specific/supported-software/a/ASF-SearchAPI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ASF-SearchAPI asf_search is a Python module for performing searches of the ASF catalog. In addition, it offers baseline functionality and download support. @@ -7,3 +11,6 @@ asf_search is a Python module for performing searches of the ASF catalog. In add version | toolchain --------|---------- ``6.5.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ASHS.md b/docs/version-specific/supported-software/a/ASHS.md index 7995c5cc0..41628262a 100644 --- a/docs/version-specific/supported-software/a/ASHS.md +++ b/docs/version-specific/supported-software/a/ASHS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ASHS Automatic Segmentation of Hippocampal Subfields (ASHS) @@ -7,3 +11,6 @@ Automatic Segmentation of Hippocampal Subfields (ASHS) version | toolchain --------|---------- ``rev103_20140612`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ASTRID.md b/docs/version-specific/supported-software/a/ASTRID.md index ec71fc11b..52ee7a986 100644 --- a/docs/version-specific/supported-software/a/ASTRID.md +++ b/docs/version-specific/supported-software/a/ASTRID.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ASTRID ASTRID-2 is a method for estimating species trees from gene trees. @@ -7,3 +11,6 @@ ASTRID-2 is a method for estimating species trees from gene trees. version | toolchain --------|---------- ``2.2.1`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ATAT.md b/docs/version-specific/supported-software/a/ATAT.md index 1250fd19a..fa014fd22 100644 --- a/docs/version-specific/supported-software/a/ATAT.md +++ b/docs/version-specific/supported-software/a/ATAT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ATAT The Alloy-Theoretic Automated Toolkit (ATAT) is a generic name that refers to a collection of alloy theory tools @@ -7,3 +11,6 @@ The Alloy-Theoretic Automated Toolkit (ATAT) is a generic name that refers to a version | toolchain --------|---------- ``3.36`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ATK.md b/docs/version-specific/supported-software/a/ATK.md index fbf5df79a..54609dd79 100644 --- a/docs/version-specific/supported-software/a/ATK.md +++ b/docs/version-specific/supported-software/a/ATK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ATK ATK provides the set of accessibility interfaces that are implemented by other toolkits and applications. Using the ATK interfaces, accessibility tools have full access to view and control running applications. @@ -30,3 +34,6 @@ version | toolchain ``2.38.0`` | ``GCCcore/12.2.0`` ``2.38.0`` | ``GCCcore/12.3.0`` ``2.38.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ATLAS.md b/docs/version-specific/supported-software/a/ATLAS.md index 9765aba37..4f659dd25 100644 --- a/docs/version-specific/supported-software/a/ATLAS.md +++ b/docs/version-specific/supported-software/a/ATLAS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ATLAS ATLAS (Automatically Tuned Linear Algebra Software) is the application of the AEOS (Automated Empirical Optimization of Software) paradigm, with the present emphasis on the Basic Linear Algebra Subprograms (BLAS), a widely used, performance-critical, linear algebra kernel library. @@ -7,3 +11,6 @@ ATLAS (Automatically Tuned Linear Algebra Software) is the application of the A version | versionsuffix | toolchain --------|---------------|---------- ``3.10.2`` | ``-LAPACK-3.6.1`` | ``GCC/5.4.0-2.26`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ATSAS.md b/docs/version-specific/supported-software/a/ATSAS.md index eda6b9a04..0975d7701 100644 --- a/docs/version-specific/supported-software/a/ATSAS.md +++ b/docs/version-specific/supported-software/a/ATSAS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ATSAS ATSAS is a program suite for small-angle scattering data analysis from biological macromolecules. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.5.1-1`` | ``.el6.x86_64`` | ``system`` ``2.5.1-1`` | ``.sl5.x86_64`` | ``system`` ``2.7.1-1`` | ``.el7.x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AUGUSTUS.md b/docs/version-specific/supported-software/a/AUGUSTUS.md index 5979a6372..86894b3cf 100644 --- a/docs/version-specific/supported-software/a/AUGUSTUS.md +++ b/docs/version-specific/supported-software/a/AUGUSTUS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AUGUSTUS AUGUSTUS is a program that predicts genes in eukaryotic genomic sequences @@ -21,3 +25,6 @@ version | versionsuffix | toolchain ``3.4.0`` | | ``foss/2021b`` ``3.5.0`` | | ``foss/2022a`` ``3.5.0`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AUTO-07p.md b/docs/version-specific/supported-software/a/AUTO-07p.md index 675cea1fd..f42e67051 100644 --- a/docs/version-specific/supported-software/a/AUTO-07p.md +++ b/docs/version-specific/supported-software/a/AUTO-07p.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AUTO-07p AUTO is a publicly available software for continuation and bifurcation problems in ordinary differential equations originally written in 1980 and widely used in the dynamical systems community. @@ -7,3 +11,6 @@ AUTO is a publicly available software for continuation and bifurcation problems version | toolchain --------|---------- ``0.9.3`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Abseil.md b/docs/version-specific/supported-software/a/Abseil.md index 807f9deeb..cd6585097 100644 --- a/docs/version-specific/supported-software/a/Abseil.md +++ b/docs/version-specific/supported-software/a/Abseil.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Abseil Abseil is an open-source collection of C++ library code designed to augment the C++ standard library. The Abseil library code is collected from Google's own C++ code base, has been extensively tested and used in production, and is the same code we depend on in our daily coding lives. @@ -11,3 +15,6 @@ version | toolchain ``20230125.2`` | ``GCCcore/12.2.0`` ``20230125.3`` | ``GCCcore/12.3.0`` ``20240116.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AdapterRemoval.md b/docs/version-specific/supported-software/a/AdapterRemoval.md index 33d7ec9cd..670612774 100644 --- a/docs/version-specific/supported-software/a/AdapterRemoval.md +++ b/docs/version-specific/supported-software/a/AdapterRemoval.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AdapterRemoval AdapterRemoval searches for and removes remnant adapter sequences from High-Throughput Sequencing (HTS) data and (optionally) trims low quality bases from the 3' end of reads following adapter removal. @@ -13,3 +17,6 @@ version | toolchain ``2.3.2`` | ``GCC/10.3.0`` ``2.3.2`` | ``GCC/11.2.0`` ``2.3.3`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Advisor.md b/docs/version-specific/supported-software/a/Advisor.md index 14eb34e1c..b1405922f 100644 --- a/docs/version-specific/supported-software/a/Advisor.md +++ b/docs/version-specific/supported-software/a/Advisor.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Advisor Vectorization Optimization and Thread Prototyping - Vectorize & thread code or performance “dies” - Easy workflow + data + tips = faster code faster - Prioritize, Prototype & Predict performance gain @@ -18,3 +22,6 @@ version | toolchain ``2022.1.0`` | ``system`` ``2023.0.0`` | ``system`` ``2023.2.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Albacore.md b/docs/version-specific/supported-software/a/Albacore.md index a384061ea..190378996 100644 --- a/docs/version-specific/supported-software/a/Albacore.md +++ b/docs/version-specific/supported-software/a/Albacore.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Albacore Albacore is a software project that provides an entry point to the Oxford Nanopore basecalling algorithms. @@ -7,3 +11,6 @@ Albacore is a software project that provides an entry point to the Oxford Nanopo version | versionsuffix | toolchain --------|---------------|---------- ``2.0.2`` | ``-Python-3.6.1`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Albumentations.md b/docs/version-specific/supported-software/a/Albumentations.md index 08e867377..027e3f453 100644 --- a/docs/version-specific/supported-software/a/Albumentations.md +++ b/docs/version-specific/supported-software/a/Albumentations.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Albumentations Albumentations is a Python library for fast and flexible image augmentations @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.1.0`` | | ``foss/2021b`` ``1.3.0`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``1.3.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Alfred.md b/docs/version-specific/supported-software/a/Alfred.md index 198662da5..aec991a42 100644 --- a/docs/version-specific/supported-software/a/Alfred.md +++ b/docs/version-specific/supported-software/a/Alfred.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Alfred Alfred is an efficient and versatile command-line application that computes multi-sample quality control metrics in a read-group aware manner. Alfred supports read counting, feature annotation and haplotype-resolved consensus computation using multiple sequence alignments. @@ -7,3 +11,6 @@ Alfred is an efficient and versatile command-line application that computes mul version | toolchain --------|---------- ``0.2.6`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Allinea.md b/docs/version-specific/supported-software/a/Allinea.md index 17c380c7d..5911ea95d 100644 --- a/docs/version-specific/supported-software/a/Allinea.md +++ b/docs/version-specific/supported-software/a/Allinea.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Allinea The Allinea environment is an essential toolkit for developers and computational scientists looking to get results faster. @@ -9,3 +13,6 @@ version | toolchain ``4.1-32834-Redhat-5.7-x86_64`` | ``system`` ``4.1-32834-Redhat-6.0-x86_64`` | ``system`` ``6.1.1-Ubuntu-14.04-x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Alpha.md b/docs/version-specific/supported-software/a/Alpha.md index 04ebace13..1ecda4776 100644 --- a/docs/version-specific/supported-software/a/Alpha.md +++ b/docs/version-specific/supported-software/a/Alpha.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Alpha Alpha is a tool designed for detailed comparative study of bacteriophage genomes. @@ -7,3 +11,6 @@ Alpha is a tool designed for detailed comparative study of bacteriophage genomes version | versionsuffix | toolchain --------|---------------|---------- ``20200430`` | ``-Python-2.7.16`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AlphaFold.md b/docs/version-specific/supported-software/a/AlphaFold.md index 2e75972be..fd764f188 100644 --- a/docs/version-specific/supported-software/a/AlphaFold.md +++ b/docs/version-specific/supported-software/a/AlphaFold.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AlphaFold AlphaFold can predict protein structures with atomic accuracy even where no similar structure is known @@ -22,3 +26,6 @@ version | versionsuffix | toolchain ``2.3.1`` | | ``foss/2022a`` ``2.3.4`` | ``-CUDA-11.7.0-ColabFold`` | ``foss/2022a`` ``2.3.4`` | ``-ColabFold`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AlphaPulldown.md b/docs/version-specific/supported-software/a/AlphaPulldown.md index 74cee77d5..998fa7098 100644 --- a/docs/version-specific/supported-software/a/AlphaPulldown.md +++ b/docs/version-specific/supported-software/a/AlphaPulldown.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AlphaPulldown AlphaPulldown is a Python package that streamlines protein-protein interaction screens and high-throughput modelling of higher-order oligomers using AlphaFold-Multimer @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.30.4`` | ``foss/2020b`` ``0.30.4`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Amara.md b/docs/version-specific/supported-software/a/Amara.md index 6e487b07e..68a742c00 100644 --- a/docs/version-specific/supported-software/a/Amara.md +++ b/docs/version-specific/supported-software/a/Amara.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Amara Library for XML processing in Python, designed to balance the native idioms of Python with the native character of XML. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.2.0.2`` | ``-Python-2.7.15`` | ``foss/2019a`` ``1.2.0.2`` | ``-Python-2.7.15`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Amber.md b/docs/version-specific/supported-software/a/Amber.md index 24b324644..540c0f06f 100644 --- a/docs/version-specific/supported-software/a/Amber.md +++ b/docs/version-specific/supported-software/a/Amber.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Amber Amber (originally Assisted Model Building with Energy Refinement) is software for performing molecular dynamics and structure prediction. @@ -30,3 +34,6 @@ version | versionsuffix | toolchain ``22.0`` | ``-AmberTools-22.3-CUDA-11.4.1`` | ``foss/2021b`` ``22.0`` | ``-AmberTools-22.3`` | ``foss/2021b`` ``22.4`` | ``-AmberTools-22.5-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AmberMini.md b/docs/version-specific/supported-software/a/AmberMini.md index 41b1928b5..f7e3f948f 100644 --- a/docs/version-specific/supported-software/a/AmberMini.md +++ b/docs/version-specific/supported-software/a/AmberMini.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AmberMini A stripped-down set of just antechamber, sqm, and tleap. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``16.16.0`` | ``intel/2017b`` ``16.16.0`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AmberTools.md b/docs/version-specific/supported-software/a/AmberTools.md index 5f8260b9d..1964fa49c 100644 --- a/docs/version-specific/supported-software/a/AmberTools.md +++ b/docs/version-specific/supported-software/a/AmberTools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AmberTools AmberTools consists of several independently developed packages that work well by themselves, and with Amber itself. The suite can also be used to carry out complete molecular dynamics simulations, with either explicit water or generalized Born solvent models. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``21`` | | ``intel/2021b`` ``21.12`` | | ``foss/2021b`` ``22.3`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AmrPlusPlus.md b/docs/version-specific/supported-software/a/AmrPlusPlus.md index 3f3e927a7..ff918ec43 100644 --- a/docs/version-specific/supported-software/a/AmrPlusPlus.md +++ b/docs/version-specific/supported-software/a/AmrPlusPlus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AmrPlusPlus AmrPlusPlus v2.0 can process the raw data from the sequencer, identify the fragments of DNA, and count them. It also provides a count of the polymorphisms that occur in each DNA fragment with respect to the reference database. @@ -7,3 +11,6 @@ AmrPlusPlus v2.0 can process the raw data from the sequencer, identify the fragm version | toolchain --------|---------- ``2.0-20200114`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Anaconda2.md b/docs/version-specific/supported-software/a/Anaconda2.md index 5aa69fa13..08f30dd8c 100644 --- a/docs/version-specific/supported-software/a/Anaconda2.md +++ b/docs/version-specific/supported-software/a/Anaconda2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Anaconda2 Built to complement the rich, open source Python community, the Anaconda platform provides an enterprise-ready data analytics platform that empowers companies to adopt a modern open data science analytics architecture. @@ -16,3 +20,6 @@ version | toolchain ``5.0.1`` | ``system`` ``5.1.0`` | ``system`` ``5.3.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Anaconda3.md b/docs/version-specific/supported-software/a/Anaconda3.md index 505fcee13..b33fcf92f 100644 --- a/docs/version-specific/supported-software/a/Anaconda3.md +++ b/docs/version-specific/supported-software/a/Anaconda3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Anaconda3 Built to complement the rich, open source Python community, the Anaconda platform provides an enterprise-ready data analytics platform that empowers companies to adopt a modern open data science analytics architecture. @@ -27,3 +31,6 @@ version | toolchain ``5.0.1`` | ``system`` ``5.1.0`` | ``system`` ``5.3.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Annif.md b/docs/version-specific/supported-software/a/Annif.md index efef948c3..0fa50916a 100644 --- a/docs/version-specific/supported-software/a/Annif.md +++ b/docs/version-specific/supported-software/a/Annif.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Annif Annif is a multi-algorithm automated subject indexing tool for libraries, archives and museums. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.40.0`` | ``-Python-3.7.2`` | ``foss/2019a`` ``0.40.0`` | ``-Python-3.7.2`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Annocript.md b/docs/version-specific/supported-software/a/Annocript.md index 74ad2f1af..d2fb90828 100644 --- a/docs/version-specific/supported-software/a/Annocript.md +++ b/docs/version-specific/supported-software/a/Annocript.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Annocript Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes blast analysis with UniProt, NCBI Conserved Domain Database and Nucleotide division adding also annotations from Gene Ontology, the Enzyme Commission and UniPathways. Annocript also gives information about the longest ORF and the non-coding potential using external software. Annocript is also capable to identify putative long non-coding RNAs by using an heuristic based on homology and sequence features. @@ -7,3 +11,6 @@ Annocript is a pipeline for the annotation of de-novo generated transcriptomes. version | toolchain --------|---------- ``2.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AptaSUITE.md b/docs/version-specific/supported-software/a/AptaSUITE.md index b97e51f88..7b4acc2ae 100644 --- a/docs/version-specific/supported-software/a/AptaSUITE.md +++ b/docs/version-specific/supported-software/a/AptaSUITE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AptaSUITE A full-featured bioinformatics software collection for the comprehensive analysis of aptamers in HT-SELEX experiments @@ -7,3 +11,6 @@ A full-featured bioinformatics software collection for the comprehensive analys version | versionsuffix | toolchain --------|---------------|---------- ``0.9.4`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Arb.md b/docs/version-specific/supported-software/a/Arb.md index ad53d119f..1ee8899b7 100644 --- a/docs/version-specific/supported-software/a/Arb.md +++ b/docs/version-specific/supported-software/a/Arb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Arb Arb is a C library for arbitrary-precision interval arithmetic. It has full support for both real and complex numbers. The library is thread-safe, portable, and extensively tested. @@ -13,3 +17,6 @@ version | toolchain ``2.19.0`` | ``GCC/10.3.0`` ``2.22.1`` | ``foss/2021b`` ``2.23.0`` | ``gfbf/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Arcade-Learning-Environment.md b/docs/version-specific/supported-software/a/Arcade-Learning-Environment.md index 7a45c8cfb..6f49c5607 100644 --- a/docs/version-specific/supported-software/a/Arcade-Learning-Environment.md +++ b/docs/version-specific/supported-software/a/Arcade-Learning-Environment.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Arcade-Learning-Environment The Arcade Learning Environment (ALE) is a simple framework that allows researchers and hobbyists to develop AI agents for Atari 2600 games. It is built on top of the Atari 2600 emulator Stella and separates the details of emulation from agent design. This video depicts over 50 games currently supported in the ALE. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.7.3`` | ``foss/2021b`` ``0.8.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ArchR.md b/docs/version-specific/supported-software/a/ArchR.md index 5b2c9d011..0cdd50cff 100644 --- a/docs/version-specific/supported-software/a/ArchR.md +++ b/docs/version-specific/supported-software/a/ArchR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ArchR ArchR is a full-featured R package for processing and analyzing single-cell ATAC-seq data. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.0.1`` | ``-R-4.1.2`` | ``foss/2021b`` ``1.0.2`` | ``-R-4.2.2`` | ``foss/2022b`` ``1.0.2`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Archive-Zip.md b/docs/version-specific/supported-software/a/Archive-Zip.md index 52b7fd90d..e421b4d8b 100644 --- a/docs/version-specific/supported-software/a/Archive-Zip.md +++ b/docs/version-specific/supported-software/a/Archive-Zip.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Archive-Zip Provide an interface to ZIP archive files. @@ -11,3 +15,6 @@ version | toolchain ``1.68`` | ``GCCcore/11.2.0`` ``1.68`` | ``GCCcore/11.3.0`` ``1.68`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AreTomo2.md b/docs/version-specific/supported-software/a/AreTomo2.md index 5a47256f8..5cbd54a37 100644 --- a/docs/version-specific/supported-software/a/AreTomo2.md +++ b/docs/version-specific/supported-software/a/AreTomo2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AreTomo2 AreTomo2, a multi-GPU accelerated software package that fully automates motion- corrected marker-free tomographic alignment and reconstruction, now includes robust GPU-accelerated CTF (Contrast Transfer Function) estimation in a single package. AreTomo2 is part of our endeavor to build a fully-automated high- throughput processing pipeline that enables real-time reconstruction of tomograms in parallel with tomographic data collection. It strives to be fast and accurate, as well as provides for easy integration into subtomogram processing workflows by generating IMod compatible files containing alignment and CTF parameters needed to bootstrap subtomogram averaging. AreTomo2 can also be used for on-the-fly reconstruction of tomograms and CTF estimation in parallel with tilt series collection, enabling real-time assessment of sample quality and adjustment of collection parameters @@ -7,3 +11,6 @@ AreTomo2, a multi-GPU accelerated software package that fully automates motion- version | versionsuffix | toolchain --------|---------------|---------- ``1.0.0`` | ``-CUDA-12.1.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Arlequin.md b/docs/version-specific/supported-software/a/Arlequin.md index 904207b0b..272b77311 100644 --- a/docs/version-specific/supported-software/a/Arlequin.md +++ b/docs/version-specific/supported-software/a/Arlequin.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Arlequin Arlequin: An Integrated Software for Population Genetics Data Analysis @@ -7,3 +11,6 @@ Arlequin: An Integrated Software for Population Genetics Data Analysis version | toolchain --------|---------- ``3.5.2.2`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Armadillo.md b/docs/version-specific/supported-software/a/Armadillo.md index 094916798..51100b312 100644 --- a/docs/version-specific/supported-software/a/Armadillo.md +++ b/docs/version-specific/supported-software/a/Armadillo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Armadillo Armadillo is an open-source C++ linear algebra library (matrix maths) aiming towards a good balance between speed and ease of use. Integer, floating point and complex numbers are supported, as well as a subset of trigonometric and statistics functions. @@ -23,3 +27,6 @@ version | versionsuffix | toolchain ``9.880.1`` | | ``foss/2020a`` ``9.900.1`` | | ``foss/2019b`` ``9.900.1`` | | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ArrayFire.md b/docs/version-specific/supported-software/a/ArrayFire.md index 99213b3cf..a71f06d48 100644 --- a/docs/version-specific/supported-software/a/ArrayFire.md +++ b/docs/version-specific/supported-software/a/ArrayFire.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ArrayFire ArrayFire is a general-purpose library that simplifies the process of developing software that targets parallel and massively-parallel architectures including CPUs, GPUs, and other hardware acceleration devices. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.6.4`` | ``-CUDA-9.2.88`` | ``foss/2018b`` ``3.6.4`` | | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Arriba.md b/docs/version-specific/supported-software/a/Arriba.md index 5b7e280fb..84ca4cd8b 100644 --- a/docs/version-specific/supported-software/a/Arriba.md +++ b/docs/version-specific/supported-software/a/Arriba.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Arriba Arriba is a command-line tool for the detection of gene fusions from RNA-Seq data. It was developed for the use in a clinical research setting. Therefore, short runtimes and high sensitivity were important design criteria. @@ -12,3 +16,6 @@ version | toolchain ``2.2.1`` | ``GCC/11.2.0`` ``2.3.0`` | ``GCC/11.2.0`` ``2.4.0`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Arrow.md b/docs/version-specific/supported-software/a/Arrow.md index 732d6ae5e..9e8c05f4a 100644 --- a/docs/version-specific/supported-software/a/Arrow.md +++ b/docs/version-specific/supported-software/a/Arrow.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Arrow Apache Arrow (incl. PyArrow Python bindings), a cross-language development platform for in-memory data. @@ -26,3 +30,6 @@ version | versionsuffix | toolchain ``8.0.0`` | | ``foss/2021b`` ``8.0.0`` | | ``foss/2022.05`` ``8.0.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Artemis.md b/docs/version-specific/supported-software/a/Artemis.md index 6e2771114..b276ab585 100644 --- a/docs/version-specific/supported-software/a/Artemis.md +++ b/docs/version-specific/supported-software/a/Artemis.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Artemis The Artemis Software is a set of software tools for genome browsing and annotation. It includes: Artemis, Artemis Comparison Tool (ACT), BamView and DNAPlotter. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``18.0.2`` | ``-Java-11`` | ``system`` ``18.0.3`` | ``-Java-11`` | ``system`` ``18.2.0`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ArviZ.md b/docs/version-specific/supported-software/a/ArviZ.md index 32eef816f..8c497e0bb 100644 --- a/docs/version-specific/supported-software/a/ArviZ.md +++ b/docs/version-specific/supported-software/a/ArviZ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ArviZ Exploratory analysis of Bayesian models with Python @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``0.16.1`` | | ``foss/2023a`` ``0.7.0`` | ``-Python-3.7.4`` | ``foss/2019b`` ``0.7.0`` | ``-Python-3.7.4`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Aspera-CLI.md b/docs/version-specific/supported-software/a/Aspera-CLI.md index 847746714..2a0d78a72 100644 --- a/docs/version-specific/supported-software/a/Aspera-CLI.md +++ b/docs/version-specific/supported-software/a/Aspera-CLI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Aspera-CLI IBM Aspera Command-Line Interface (the Aspera CLI) is a collection of Aspera tools for performing high-speed, secure data transfers from the command line. The Aspera CLI is for users and organizations who want to automate their transfer workflows. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``3.7.2`` | ``.354.010c3b8`` | ``system`` ``3.9.0`` | ``.1326.6985b21`` | ``system`` ``3.9.6`` | ``.1467.159c5b1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Aspera-Connect.md b/docs/version-specific/supported-software/a/Aspera-Connect.md index 4c9b4c50c..f2d2e5441 100644 --- a/docs/version-specific/supported-software/a/Aspera-Connect.md +++ b/docs/version-specific/supported-software/a/Aspera-Connect.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Aspera-Connect Connect is an install-on-demand Web browser plug-in that facilitates high-speed uploads and downloads with an Aspera transfer server. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.6.1`` | ``system`` ``3.9.6`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Assimulo.md b/docs/version-specific/supported-software/a/Assimulo.md index 1914b975b..d822dee2f 100644 --- a/docs/version-specific/supported-software/a/Assimulo.md +++ b/docs/version-specific/supported-software/a/Assimulo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Assimulo Assimulo is a simulation package for solving ordinary differential equations. @@ -7,3 +11,6 @@ Assimulo is a simulation package for solving ordinary differential equations. version | versionsuffix | toolchain --------|---------------|---------- ``2.9`` | ``-Python-2.7.15`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AtomPAW.md b/docs/version-specific/supported-software/a/AtomPAW.md index 85238b8a7..86dc879ae 100644 --- a/docs/version-specific/supported-software/a/AtomPAW.md +++ b/docs/version-specific/supported-software/a/AtomPAW.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AtomPAW AtomPAW is a Projector-Augmented Wave Dataset Generator that can be used both as a standalone program and a library. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``4.1.0.5`` | ``intel/2018b`` ``4.1.0.6`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Austin.md b/docs/version-specific/supported-software/a/Austin.md index c58e1bbb1..e7f17b68c 100644 --- a/docs/version-specific/supported-software/a/Austin.md +++ b/docs/version-specific/supported-software/a/Austin.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Austin Austin is a Python frame stack sampler for CPython written in pure C. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.2.0`` | ``GCCcore/11.2.0`` ``3.2.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AutoDock-GPU.md b/docs/version-specific/supported-software/a/AutoDock-GPU.md index 88611866f..a6eb46079 100644 --- a/docs/version-specific/supported-software/a/AutoDock-GPU.md +++ b/docs/version-specific/supported-software/a/AutoDock-GPU.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AutoDock-GPU OpenCL and Cuda accelerated version of AutoDock. It leverages its embarrasingly parallelizable LGA by processing ligand-receptor poses in parallel over multiple compute units. AutoDock is a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.5.3`` | ``-CUDA-11.3.1`` | ``GCC/10.3.0`` ``1.5.3`` | ``-CUDA-11.7.0`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AutoDock-Vina.md b/docs/version-specific/supported-software/a/AutoDock-Vina.md index 469cb1f96..b240152d5 100644 --- a/docs/version-specific/supported-software/a/AutoDock-Vina.md +++ b/docs/version-specific/supported-software/a/AutoDock-Vina.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AutoDock-Vina AutoDock Vina is an open-source program for doing molecular docking. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.1.2`` | ``-linux_x86`` | ``system`` ``1.2.3`` | | ``foss/2021a`` ``1.2.3`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AutoDock.md b/docs/version-specific/supported-software/a/AutoDock.md index ddf6fbbbf..4fdf5d607 100644 --- a/docs/version-specific/supported-software/a/AutoDock.md +++ b/docs/version-specific/supported-software/a/AutoDock.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AutoDock AutoDock is a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``4.2.5.1`` | ``GCC/5.2.0`` ``4.2.6`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AutoDockSuite.md b/docs/version-specific/supported-software/a/AutoDockSuite.md index 3b2ae993c..3556401fb 100644 --- a/docs/version-specific/supported-software/a/AutoDockSuite.md +++ b/docs/version-specific/supported-software/a/AutoDockSuite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AutoDockSuite AutoDock is a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure. @@ -7,3 +11,6 @@ AutoDock is a suite of automated docking tools. It is designed to predict how s version | toolchain --------|---------- ``4.2.6`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AutoGeneS.md b/docs/version-specific/supported-software/a/AutoGeneS.md index 97ca904b6..f3eb01b97 100644 --- a/docs/version-specific/supported-software/a/AutoGeneS.md +++ b/docs/version-specific/supported-software/a/AutoGeneS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AutoGeneS AutoGeneS automatically extracts informative genes and reveals the cellular heterogeneity of bulk RNA samples. @@ -7,3 +11,6 @@ AutoGeneS automatically extracts informative genes and reveals the cellular hete version | toolchain --------|---------- ``1.0.4`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AutoGrid.md b/docs/version-specific/supported-software/a/AutoGrid.md index 4fc878f55..01d87f2dd 100644 --- a/docs/version-specific/supported-software/a/AutoGrid.md +++ b/docs/version-specific/supported-software/a/AutoGrid.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AutoGrid AutoDock is a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure. @@ -7,3 +11,6 @@ AutoDock is a suite of automated docking tools. It is designed to predict how version | toolchain --------|---------- ``4.2.5.1`` | ``GCC/5.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/AutoMap.md b/docs/version-specific/supported-software/a/AutoMap.md index c0dc6bc72..67c82d468 100644 --- a/docs/version-specific/supported-software/a/AutoMap.md +++ b/docs/version-specific/supported-software/a/AutoMap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # AutoMap Tool to find regions of homozygosity (ROHs) from sequencing data. @@ -7,3 +11,6 @@ Tool to find regions of homozygosity (ROHs) from sequencing data. version | versionsuffix | toolchain --------|---------------|---------- ``1.0`` | ``-20200324`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Autoconf-archive.md b/docs/version-specific/supported-software/a/Autoconf-archive.md index ad774f3ea..c397adb09 100644 --- a/docs/version-specific/supported-software/a/Autoconf-archive.md +++ b/docs/version-specific/supported-software/a/Autoconf-archive.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Autoconf-archive The GNU Autoconf Archive is a collection of more than 500 macros for GNU Autoconf that have been contributed as free software by friendly supporters of the cause from all over the Internet. Every single one of those macros can be re-used without imposing any restrictions whatsoever on the licensing of the generated configure script. In particular, it is possible to use all those macros in configure scripts that are meant for non-free software. This policy is unusual for a Free Software Foundation project. The FSF firmly believes that software ought to be free, and software licenses like the GPL are specifically designed to ensure that derivative work based on free software must be free as well. In case of Autoconf, however, an exception has been made, because Autoconf is at such a pivotal position in the software development tool chain that the benefits from having this tool available as widely as possible outweigh the disadvantage that some authors may choose to use it, too, for proprietary software. @@ -9,3 +13,6 @@ version | toolchain ``2019.01.06`` | ``GCC/8.2.0-2.31.1`` ``2021.02.19`` | ``GCCcore/10.2.0`` ``2023.02.20`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Autoconf.md b/docs/version-specific/supported-software/a/Autoconf.md index 2c35aefe9..53730ef39 100644 --- a/docs/version-specific/supported-software/a/Autoconf.md +++ b/docs/version-specific/supported-software/a/Autoconf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Autoconf Autoconf is an extensible package of M4 macros that produce shell scripts to automatically configure software source code packages. These scripts can adapt the packages to many kinds of UNIX-like systems without manual user intervention. Autoconf creates a configuration script for a package from a template file that lists the operating system features that the package can use, in the form of M4 macro calls. @@ -52,3 +56,6 @@ version | toolchain ``2.71`` | ``GCCcore/13.2.0`` ``2.71`` | ``system`` ``2.72`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Automake.md b/docs/version-specific/supported-software/a/Automake.md index cd27043da..a9d507a85 100644 --- a/docs/version-specific/supported-software/a/Automake.md +++ b/docs/version-specific/supported-software/a/Automake.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Automake Automake: GNU Standards-compliant Makefile generator @@ -57,3 +61,6 @@ version | toolchain ``1.16.5`` | ``GCCcore/13.2.0`` ``1.16.5`` | ``GCCcore/13.3.0`` ``1.16.5`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Autotools.md b/docs/version-specific/supported-software/a/Autotools.md index 309c26c91..747a459d0 100644 --- a/docs/version-specific/supported-software/a/Autotools.md +++ b/docs/version-specific/supported-software/a/Autotools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Autotools This bundle collect the standard GNU build tools: Autoconf, Automake and libtool @@ -52,3 +56,6 @@ version | toolchain ``20220317`` | ``GCCcore/13.2.0`` ``20220317`` | ``system`` ``20231222`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Avogadro2.md b/docs/version-specific/supported-software/a/Avogadro2.md index ec6d517f4..418b5ecae 100644 --- a/docs/version-specific/supported-software/a/Avogadro2.md +++ b/docs/version-specific/supported-software/a/Avogadro2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Avogadro2 Avogadro is an advanced molecule editor and visualizer designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. @@ -7,3 +11,6 @@ Avogadro is an advanced molecule editor and visualizer designed for cross-platfo version | versionsuffix | toolchain --------|---------------|---------- ``1.97.0`` | ``-linux-x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/Ax.md b/docs/version-specific/supported-software/a/Ax.md index 6c88585e8..f78c95257 100644 --- a/docs/version-specific/supported-software/a/Ax.md +++ b/docs/version-specific/supported-software/a/Ax.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Ax Ax is an accessible, general-purpose platform for understanding, managing, deploying, and automating adaptive experiments. Adaptive experimentation is the machine-learning guided process of iteratively exploring a (possibly infinite) parameter space in order to identify optimal configurations in a resource-efficient manner. Ax currently supports Bayesian optimization and bandit optimization as exploration strategies. Bayesian optimization in Ax is powered by BoTorch, a modern library for Bayesian optimization research built on PyTorch. @@ -7,3 +11,6 @@ Ax is an accessible, general-purpose platform for understanding, managing, deplo version | toolchain --------|---------- ``0.3.3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/aNCI.md b/docs/version-specific/supported-software/a/aNCI.md index 30ae167b1..c79e3b65c 100644 --- a/docs/version-specific/supported-software/a/aNCI.md +++ b/docs/version-specific/supported-software/a/aNCI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # aNCI Non-covalent interaction (NCI) for MD trajectories @@ -7,3 +11,6 @@ Non-covalent interaction (NCI) for MD trajectories version | toolchain --------|---------- ``2.0`` | ``iccifort/2019.5.281`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/abTEM.md b/docs/version-specific/supported-software/a/abTEM.md index 7e072ce6f..565011b97 100644 --- a/docs/version-specific/supported-software/a/abTEM.md +++ b/docs/version-specific/supported-software/a/abTEM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # abTEM abTEM provides a Python API for running simulations of Transmission Electron Microscopy images. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.0.0b24`` | ``-ASE-3.22.0`` | ``fosscuda/2020b`` ``1.0.0b26`` | ``-ASE-3.22.0`` | ``foss/2020b`` ``1.0.0b26`` | ``-ASE-3.22.0`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ack.md b/docs/version-specific/supported-software/a/ack.md index fc837dd43..0f9932424 100644 --- a/docs/version-specific/supported-software/a/ack.md +++ b/docs/version-specific/supported-software/a/ack.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ack ack is a tool like grep, optimized for programmers @@ -9,3 +13,6 @@ version | toolchain ``2.14`` | ``system`` ``3.4.0`` | ``GCCcore/10.2.0`` ``3.5.0`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ada.md b/docs/version-specific/supported-software/a/ada.md index 025864bcd..527ee24f4 100644 --- a/docs/version-specific/supported-software/a/ada.md +++ b/docs/version-specific/supported-software/a/ada.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ada Performs discrete, real, and gentle boost under both exponential and logistic loss on a given data set. @@ -7,3 +11,6 @@ Performs discrete, real, and gentle boost under both exponential and logistic lo version | versionsuffix | toolchain --------|---------------|---------- ``2.0-5`` | ``-R-3.4.0`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/adjustText.md b/docs/version-specific/supported-software/a/adjustText.md index 4e9a3d6cf..e7cefeed2 100644 --- a/docs/version-specific/supported-software/a/adjustText.md +++ b/docs/version-specific/supported-software/a/adjustText.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # adjustText A small library for automatically adjustment of text position in matplotlib plots to minimize overlaps. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.7.3`` | | ``foss/2023a`` ``0.7.3`` | ``-Python-3.7.2`` | ``intel/2019a`` ``1.1.1`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/affinity.md b/docs/version-specific/supported-software/a/affinity.md index 7ca70a50c..ebd69e124 100644 --- a/docs/version-specific/supported-software/a/affinity.md +++ b/docs/version-specific/supported-software/a/affinity.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # affinity A small C++ wrapper for managing Linux CPU sets and CPU affinity. It also includes a tool to report binding, which is useful for testing different binding options @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20230524`` | ``foss/2022a`` ``20230524`` | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/aiohttp.md b/docs/version-specific/supported-software/a/aiohttp.md index e9e192e60..94aad4010 100644 --- a/docs/version-specific/supported-software/a/aiohttp.md +++ b/docs/version-specific/supported-software/a/aiohttp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # aiohttp " Async http client/server framework @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``3.8.5`` | | ``GCCcore/12.2.0`` ``3.8.5`` | | ``GCCcore/12.3.0`` ``3.9.5`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/alevin-fry.md b/docs/version-specific/supported-software/a/alevin-fry.md index c1a462f96..87c8d4278 100644 --- a/docs/version-specific/supported-software/a/alevin-fry.md +++ b/docs/version-specific/supported-software/a/alevin-fry.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # alevin-fry alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding. @@ -9,3 +13,6 @@ version | toolchain ``0.4.3`` | ``GCCcore/11.2.0`` ``0.6.0`` | ``GCCcore/10.3.0`` ``0.9.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/alleleCount.md b/docs/version-specific/supported-software/a/alleleCount.md index d9fd83dbd..145474ca2 100644 --- a/docs/version-specific/supported-software/a/alleleCount.md +++ b/docs/version-specific/supported-software/a/alleleCount.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # alleleCount The alleleCount package primarily exists to prevent code duplication between some other projects, specifically AscatNGS and Battenberg. As of v4 the perl code wraps the C implementation of allele counting code for BAM/CRAM processing. @@ -9,3 +13,6 @@ version | toolchain ``4.0.0`` | ``GCCcore/6.4.0`` ``4.2.1`` | ``GCC/11.3.0`` ``4.3.0`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/alleleIntegrator.md b/docs/version-specific/supported-software/a/alleleIntegrator.md index 1b34398e5..00cf297de 100644 --- a/docs/version-specific/supported-software/a/alleleIntegrator.md +++ b/docs/version-specific/supported-software/a/alleleIntegrator.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # alleleIntegrator R package to generate allele specific counts for scRNA data and use it to identify cancer cells @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.8.8`` | ``-R-4.2.1`` | ``foss/2022a`` ``0.8.8`` | ``-R-4.2.2`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/almosthere.md b/docs/version-specific/supported-software/a/almosthere.md index 0bcb49452..c3fd3c7f3 100644 --- a/docs/version-specific/supported-software/a/almosthere.md +++ b/docs/version-specific/supported-software/a/almosthere.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # almosthere Progress indicator C library. ATHR is a simple yet powerful progress indicator library that works on Windows, Linux, and macOS. It is non-blocking as the progress update is done via a dedicated, lightweight thread, as to not impair the performance of the calling program. @@ -9,3 +13,6 @@ version | toolchain ``1.0.1`` | ``GCCcore/7.3.0`` ``1.0.10`` | ``GCCcore/9.3.0`` ``2.0.2`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/alsa-lib.md b/docs/version-specific/supported-software/a/alsa-lib.md index a4213ec2b..ad2a1c67f 100644 --- a/docs/version-specific/supported-software/a/alsa-lib.md +++ b/docs/version-specific/supported-software/a/alsa-lib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # alsa-lib The Advanced Linux Sound Architecture (ALSA) provides audio and MIDI functionality to the Linux operating system. @@ -11,3 +15,6 @@ version | toolchain ``1.2.8`` | ``GCCcore/11.2.0`` ``1.2.8`` | ``GCCcore/11.3.0`` ``1.2.9`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/amask.md b/docs/version-specific/supported-software/a/amask.md index 2ecb61ab8..099fdaa24 100644 --- a/docs/version-specific/supported-software/a/amask.md +++ b/docs/version-specific/supported-software/a/amask.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # amask amask is a set of tools to to determine the affinity of MPI processes and OpenMP threads in a parallel environment. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20171106`` | ``foss/2018a`` ``20190404`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/amdahl.md b/docs/version-specific/supported-software/a/amdahl.md index 009d675a2..5b3b8b971 100644 --- a/docs/version-specific/supported-software/a/amdahl.md +++ b/docs/version-specific/supported-software/a/amdahl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # amdahl This Python module contains a pseudo-application that can be used as a black box to reproduce Amdahl's Law. It does not do real calculations, nor any real communication, so can easily be overloaded. @@ -7,3 +11,6 @@ This Python module contains a pseudo-application that can be used as a black box version | toolchain --------|---------- ``0.3.1`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/amplimap.md b/docs/version-specific/supported-software/a/amplimap.md index fcc320d8a..0a164cb19 100644 --- a/docs/version-specific/supported-software/a/amplimap.md +++ b/docs/version-specific/supported-software/a/amplimap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # amplimap amplimap is a command-line tool to automate the processing and analysis of data from targeted next-generation sequencing (NGS) experiments with PCR-based amplicons or capture-based enrichment systems. @@ -7,3 +11,6 @@ amplimap is a command-line tool to automate the processing and analysis of data version | versionsuffix | toolchain --------|---------------|---------- ``0.4.16`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/anadama2.md b/docs/version-specific/supported-software/a/anadama2.md index 2b67ca63e..0b95f6c9c 100644 --- a/docs/version-specific/supported-software/a/anadama2.md +++ b/docs/version-specific/supported-software/a/anadama2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # anadama2 AnADAMA2 is the next generation of AnADAMA (Another Automated Data Analysis Management Application). AnADAMA is a tool to create reproducible workflows and execute them efficiently. @@ -7,3 +11,6 @@ AnADAMA2 is the next generation of AnADAMA (Another Automated Data Analysis Mana version | toolchain --------|---------- ``0.10.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/andi.md b/docs/version-specific/supported-software/a/andi.md index 36e0fc057..253f9a927 100644 --- a/docs/version-specific/supported-software/a/andi.md +++ b/docs/version-specific/supported-software/a/andi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # andi This is the andi program for estimating the evolutionary distance between closely related genomes. These distances can be used to rapidly infer phylogenies for big sets of genomes. Because andi does not compute full alignments, it is so efficient that it scales even up to thousands of bacterial genomes. @@ -7,3 +11,6 @@ This is the andi program for estimating the evolutionary distance between closel version | toolchain --------|---------- ``0.13`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/angsd.md b/docs/version-specific/supported-software/a/angsd.md index 7466b1de9..61a30127c 100644 --- a/docs/version-specific/supported-software/a/angsd.md +++ b/docs/version-specific/supported-software/a/angsd.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # angsd Program for analysing NGS data. @@ -14,3 +18,6 @@ version | toolchain ``0.935`` | ``GCC/10.2.0`` ``0.940`` | ``GCC/11.2.0`` ``0.940`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/anndata.md b/docs/version-specific/supported-software/a/anndata.md index c59aac755..c8a7a80c5 100644 --- a/docs/version-specific/supported-software/a/anndata.md +++ b/docs/version-specific/supported-software/a/anndata.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # anndata anndata is a Python package for handling annotated data matrices in memory and on disk, positioned between pandas and xarray @@ -10,3 +14,6 @@ version | toolchain ``0.8.0`` | ``foss/2022a`` ``0.9.2`` | ``foss/2021a`` ``0.9.2`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/annovar.md b/docs/version-specific/supported-software/a/annovar.md index 907383cd1..a8ae3b4cd 100644 --- a/docs/version-specific/supported-software/a/annovar.md +++ b/docs/version-specific/supported-software/a/annovar.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # annovar ANNOVAR is an efficient software tool to utilize update-to-date information to functionally annotate genetic variants detected from diverse genomes (including human genome hg18, hg19, hg38, as well as mouse, worm, fly, yeast and many others). @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2016Feb01`` | ``-Perl-5.22.1`` | ``foss/2016a`` ``20191024`` | ``-Perl-5.28.1`` | ``GCCcore/8.2.0`` ``20200607`` | ``-Perl-5.34.0`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/ant.md b/docs/version-specific/supported-software/a/ant.md index ef4428aa2..b7f01641d 100644 --- a/docs/version-specific/supported-software/a/ant.md +++ b/docs/version-specific/supported-software/a/ant.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ant Apache Ant is a Java library and command-line tool whose mission is to drive processes described in build files as targets and extension points dependent upon each other. The main known usage of Ant is the build of Java applications. @@ -36,3 +40,6 @@ version | versionsuffix | toolchain ``1.9.6`` | ``-Java-1.8.0_72`` | ``system`` ``1.9.6`` | ``-Java-1.8.0_77`` | ``system`` ``1.9.7`` | ``-Java-1.8.0_92`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/antiSMASH.md b/docs/version-specific/supported-software/a/antiSMASH.md index 4562694fa..e5921ec11 100644 --- a/docs/version-specific/supported-software/a/antiSMASH.md +++ b/docs/version-specific/supported-software/a/antiSMASH.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # antiSMASH antiSMASH allows the rapid genome-wide identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genomes. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``5.1.2`` | ``-Python-3.7.4`` | ``foss/2019b`` ``5.2.0`` | | ``foss/2020b`` ``6.0.1`` | | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/anvio.md b/docs/version-specific/supported-software/a/anvio.md index f384a8ba9..229830299 100644 --- a/docs/version-specific/supported-software/a/anvio.md +++ b/docs/version-specific/supported-software/a/anvio.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # anvio An analysis and visualization platform for 'omics data. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``6.1`` | ``-Python-3.7.4`` | ``intel/2019b`` ``8`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/any2fasta.md b/docs/version-specific/supported-software/a/any2fasta.md index 2bf28252f..140464080 100644 --- a/docs/version-specific/supported-software/a/any2fasta.md +++ b/docs/version-specific/supported-software/a/any2fasta.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # any2fasta Convert various sequence formats to FASTA @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``0.4.2`` | ``-Perl-5.28.1`` | ``GCCcore/8.2.0`` ``0.4.2`` | | ``GCCcore/8.3.0`` ``0.4.2`` | | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/apex.md b/docs/version-specific/supported-software/a/apex.md index 6d009f50b..761755d92 100644 --- a/docs/version-specific/supported-software/a/apex.md +++ b/docs/version-specific/supported-software/a/apex.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # apex A PyTorch Extension: Tools for easy mixed precision and distributed training in Pytorch @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``20200325`` | ``-Python-3.7.4`` | ``fosscuda/2019b`` ``20210420`` | | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/arcasHLA.md b/docs/version-specific/supported-software/a/arcasHLA.md index 67a5a15e9..f6338c667 100644 --- a/docs/version-specific/supported-software/a/arcasHLA.md +++ b/docs/version-specific/supported-software/a/arcasHLA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # arcasHLA arcasHLA performs high resolution genotyping for HLA class I and class II genes from RNA sequencing, supporting both paired and single-end samples. @@ -7,3 +11,6 @@ arcasHLA performs high resolution genotyping for HLA class I and class II genes version | versionsuffix | toolchain --------|---------------|---------- ``0.2.0`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/archspec.md b/docs/version-specific/supported-software/a/archspec.md index 36e0fc82e..ba5196ae9 100644 --- a/docs/version-specific/supported-software/a/archspec.md +++ b/docs/version-specific/supported-software/a/archspec.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # archspec A library for detecting, labeling, and reasoning about microarchitectures @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``0.2.0`` | | ``GCCcore/12.2.0`` ``0.2.1`` | | ``GCCcore/12.3.0`` ``0.2.2`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/argtable.md b/docs/version-specific/supported-software/a/argtable.md index af90300fe..89703f32a 100644 --- a/docs/version-specific/supported-software/a/argtable.md +++ b/docs/version-specific/supported-software/a/argtable.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # argtable Argtable is an ANSI C library for parsing GNU style command line options with a minimum of fuss. @@ -15,3 +19,6 @@ version | toolchain ``2.13`` | ``foss/2018b`` ``2.13`` | ``intel/2018a`` ``2.13`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/aria2.md b/docs/version-specific/supported-software/a/aria2.md index c4f3b339c..17efba3c7 100644 --- a/docs/version-specific/supported-software/a/aria2.md +++ b/docs/version-specific/supported-software/a/aria2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # aria2 aria2 is a lightweight multi-protocol & multi-source command-line download utility. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.35.0`` | ``GCCcore/10.3.0`` ``1.36.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/arosics.md b/docs/version-specific/supported-software/a/arosics.md index 72bf96616..243c1731a 100644 --- a/docs/version-specific/supported-software/a/arosics.md +++ b/docs/version-specific/supported-software/a/arosics.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # arosics AROSICS is a python package to perform automatic subpixel co-registration of two satellite image datasets based on an image matching approach working in the frequency domain, combined with a multistage workflow for effective detection of false-positives. @@ -7,3 +11,6 @@ AROSICS is a python package to perform automatic subpixel co-registration of two version | toolchain --------|---------- ``1.7.6`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/arpack-ng.md b/docs/version-specific/supported-software/a/arpack-ng.md index 791627a11..a89688d20 100644 --- a/docs/version-specific/supported-software/a/arpack-ng.md +++ b/docs/version-specific/supported-software/a/arpack-ng.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # arpack-ng ARPACK is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems. @@ -31,3 +35,6 @@ version | toolchain ``3.9.0`` | ``foss/2023a`` ``3.9.0`` | ``foss/2023b`` ``3.9.1`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/arrow-R.md b/docs/version-specific/supported-software/a/arrow-R.md index 07f6581c2..c629eb475 100644 --- a/docs/version-specific/supported-software/a/arrow-R.md +++ b/docs/version-specific/supported-software/a/arrow-R.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # arrow-R R interface to the Apache Arrow C++ library @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``6.0.0.2`` | ``-R-4.1.2`` | ``foss/2021b`` ``6.0.0.2`` | ``-R-4.2.0`` | ``foss/2021b`` ``8.0.0`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/artic-ncov2019.md b/docs/version-specific/supported-software/a/artic-ncov2019.md index 693c040c6..bb6f0e809 100644 --- a/docs/version-specific/supported-software/a/artic-ncov2019.md +++ b/docs/version-specific/supported-software/a/artic-ncov2019.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # artic-ncov2019 Initial implementation of an ARTIC bioinformatics platform for nanopore sequencing of nCoV2019 novel coronavirus. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2020.04.13`` | ``-Python-3.6.6`` | ``foss/2018b`` ``2021.06.24`` | | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/assembly-stats.md b/docs/version-specific/supported-software/a/assembly-stats.md index b83aa9ab1..76abec230 100644 --- a/docs/version-specific/supported-software/a/assembly-stats.md +++ b/docs/version-specific/supported-software/a/assembly-stats.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # assembly-stats Get assembly statistics from FASTA and FASTQ files. @@ -7,3 +11,6 @@ Get assembly statistics from FASTA and FASTQ files. version | toolchain --------|---------- ``1.0.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/assimp.md b/docs/version-specific/supported-software/a/assimp.md index 2871ed18d..6d16cd313 100644 --- a/docs/version-specific/supported-software/a/assimp.md +++ b/docs/version-specific/supported-software/a/assimp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # assimp Open Asset Import Library (assimp) is a library to import and export various 3d-model-formats including scene-post-processing to generate missing render data. @@ -9,3 +13,6 @@ version | toolchain ``5.0.1`` | ``GCCcore/8.3.0`` ``5.2.5`` | ``GCCcore/12.3.0`` ``5.3.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/astro-tulips.md b/docs/version-specific/supported-software/a/astro-tulips.md index bc9cf3d4c..ab37724ba 100644 --- a/docs/version-specific/supported-software/a/astro-tulips.md +++ b/docs/version-specific/supported-software/a/astro-tulips.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # astro-tulips tulips creates diagrams of the structure and evolution of stars. It creates plots and movies based on output from the MESA stellar evolution code @@ -7,3 +11,6 @@ tulips creates diagrams of the structure and evolution of stars. It creates plot version | toolchain --------|---------- ``1.0.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/astropy.md b/docs/version-specific/supported-software/a/astropy.md index 644a06bb9..bca428882 100644 --- a/docs/version-specific/supported-software/a/astropy.md +++ b/docs/version-specific/supported-software/a/astropy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # astropy The Astropy Project is a community effort to develop a single core package for Astronomy in Python and foster interoperability between Python astronomy packages. @@ -22,3 +26,6 @@ version | versionsuffix | toolchain ``5.1.1`` | | ``foss/2022a`` ``5.1.1`` | | ``intel/2022a`` ``5.2.2`` | | ``gfbf/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/at-spi2-atk.md b/docs/version-specific/supported-software/a/at-spi2-atk.md index 6d41243cc..5027d53c9 100644 --- a/docs/version-specific/supported-software/a/at-spi2-atk.md +++ b/docs/version-specific/supported-software/a/at-spi2-atk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # at-spi2-atk AT-SPI 2 toolkit bridge @@ -17,3 +21,6 @@ version | toolchain ``2.38.0`` | ``GCCcore/12.2.0`` ``2.38.0`` | ``GCCcore/12.3.0`` ``2.38.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/at-spi2-core.md b/docs/version-specific/supported-software/a/at-spi2-core.md index 53553e437..a13066c0b 100644 --- a/docs/version-specific/supported-software/a/at-spi2-core.md +++ b/docs/version-specific/supported-software/a/at-spi2-core.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # at-spi2-core Assistive Technology Service Provider Interface. @@ -17,3 +21,6 @@ version | toolchain ``2.46.0`` | ``GCCcore/12.2.0`` ``2.49.91`` | ``GCCcore/12.3.0`` ``2.50.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/atomate.md b/docs/version-specific/supported-software/a/atomate.md index 2ac11d364..f2796c7ac 100644 --- a/docs/version-specific/supported-software/a/atomate.md +++ b/docs/version-specific/supported-software/a/atomate.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # atomate atomate has implementations of FireWorks workflows for Materials Science. @@ -7,3 +11,6 @@ atomate has implementations of FireWorks workflows for Materials Science. version | versionsuffix | toolchain --------|---------------|---------- ``0.4.4`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/atools.md b/docs/version-specific/supported-software/a/atools.md index fbf012222..891c9f053 100644 --- a/docs/version-specific/supported-software/a/atools.md +++ b/docs/version-specific/supported-software/a/atools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # atools Tools to make using job arrays a lot more convenient. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``1.5.1`` | | ``GCCcore/11.2.0`` ``1.5.1`` | | ``GCCcore/12.3.0`` ``1.5.1`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/atropos.md b/docs/version-specific/supported-software/a/atropos.md index 7e46a4d90..5f0c9e91d 100644 --- a/docs/version-specific/supported-software/a/atropos.md +++ b/docs/version-specific/supported-software/a/atropos.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # atropos Atropos is tool for specific, sensitive, and speedy trimming of NGS reads. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.1.21`` | ``-Python-3.6.6`` | ``intel/2018b`` ``1.1.32`` | | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/attr.md b/docs/version-specific/supported-software/a/attr.md index 0ff217414..240a280e9 100644 --- a/docs/version-specific/supported-software/a/attr.md +++ b/docs/version-specific/supported-software/a/attr.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # attr Commands for Manipulating Filesystem Extended Attributes @@ -12,3 +16,6 @@ version | toolchain ``2.5.1`` | ``GCCcore/11.2.0`` ``2.5.1`` | ``GCCcore/11.3.0`` ``2.5.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/attrdict.md b/docs/version-specific/supported-software/a/attrdict.md index 859f7fa9b..19c78efc6 100644 --- a/docs/version-specific/supported-software/a/attrdict.md +++ b/docs/version-specific/supported-software/a/attrdict.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # attrdict AttrDict is a Python library that provides mapping objects that allow their elements to be accessed both as keys and as attributes. @@ -7,3 +11,6 @@ AttrDict is a Python library that provides mapping objects that allow their elem version | versionsuffix | toolchain --------|---------------|---------- ``2.0.1`` | ``-Python-3.7.4`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/attrdict3.md b/docs/version-specific/supported-software/a/attrdict3.md index e81dbb0be..6185e70ae 100644 --- a/docs/version-specific/supported-software/a/attrdict3.md +++ b/docs/version-specific/supported-software/a/attrdict3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # attrdict3 AttrDict is a Python library that provides mapping objects that allow their elements to be accessed both as keys and as attributes. @@ -9,3 +13,6 @@ version | toolchain ``2.0.2`` | ``GCCcore/11.2.0`` ``2.0.2`` | ``GCCcore/11.3.0`` ``2.0.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/augur.md b/docs/version-specific/supported-software/a/augur.md index e3bcd90a3..9306e21eb 100644 --- a/docs/version-specific/supported-software/a/augur.md +++ b/docs/version-specific/supported-software/a/augur.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # augur Pipeline components for real-time phylodynamic analysis @@ -7,3 +11,6 @@ Pipeline components for real-time phylodynamic analysis version | versionsuffix | toolchain --------|---------------|---------- ``7.0.2`` | ``-Python-3.7.4`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/autopep8.md b/docs/version-specific/supported-software/a/autopep8.md index 337494a56..5a499851f 100644 --- a/docs/version-specific/supported-software/a/autopep8.md +++ b/docs/version-specific/supported-software/a/autopep8.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # autopep8 A tool that automatically formats Python code to conform to the PEP 8 style guide. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.4.4`` | ``-Python-3.6.4`` | ``intel/2018a`` ``2.0.4`` | | ``foss/2022a`` ``2.2.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/avro-cpp.md b/docs/version-specific/supported-software/a/avro-cpp.md index 90d8711cc..873f77b43 100644 --- a/docs/version-specific/supported-software/a/avro-cpp.md +++ b/docs/version-specific/supported-software/a/avro-cpp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # avro-cpp C++ implementation of Avro data serialization system. @@ -7,3 +11,6 @@ C++ implementation of Avro data serialization system. version | toolchain --------|---------- ``1.11.1`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/awscli.md b/docs/version-specific/supported-software/a/awscli.md index 5690b20b7..fb68cc272 100644 --- a/docs/version-specific/supported-software/a/awscli.md +++ b/docs/version-specific/supported-software/a/awscli.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # awscli Universal Command Line Environment for AWS @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``2.0.55`` | ``-Python-3.8.2`` | ``GCCcore/9.3.0`` ``2.11.21`` | | ``GCCcore/11.3.0`` ``2.15.2`` | | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/axel.md b/docs/version-specific/supported-software/a/axel.md index 3a52b8473..c668d1bb9 100644 --- a/docs/version-specific/supported-software/a/axel.md +++ b/docs/version-specific/supported-software/a/axel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # axel Lightweight CLI download accelerator @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.17.9`` | ``GCCcore/8.3.0`` ``2.17.9`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/a/index.md b/docs/version-specific/supported-software/a/index.md index 05c3e6cd1..be0d91b8e 100644 --- a/docs/version-specific/supported-software/a/index.md +++ b/docs/version-specific/supported-software/a/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (a) +[../0/index.md](0) - *a* - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [ABAQUS](ABAQUS.md) * [ABINIT](ABINIT.md) * [ABRA2](ABRA2.md) diff --git a/docs/version-specific/supported-software/b/BA3-SNPS-autotune.md b/docs/version-specific/supported-software/b/BA3-SNPS-autotune.md index 08171fa96..c38706c94 100644 --- a/docs/version-specific/supported-software/b/BA3-SNPS-autotune.md +++ b/docs/version-specific/supported-software/b/BA3-SNPS-autotune.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BA3-SNPS-autotune This program will automatically tune mixing parameters for BA3-SNPs by implementing a binary search algorithm and conducting short exploratory runs of BA3-SNPS. @@ -7,3 +11,6 @@ This program will automatically tune mixing parameters for BA3-SNPs by implement version | toolchain --------|---------- ``2.1.2`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BAGEL.md b/docs/version-specific/supported-software/b/BAGEL.md index 4a4ffe942..e3bedc58e 100644 --- a/docs/version-specific/supported-software/b/BAGEL.md +++ b/docs/version-specific/supported-software/b/BAGEL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BAGEL BAGEL (Brilliantly Advanced General Electronic-structure Library) is a parallel electronic-structure program. @@ -9,3 +13,6 @@ version | toolchain ``1.1.1`` | ``intel/2016b`` ``1.2.2`` | ``foss/2021a`` ``1.2.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BAMM.md b/docs/version-specific/supported-software/b/BAMM.md index 996205771..24570412a 100644 --- a/docs/version-specific/supported-software/b/BAMM.md +++ b/docs/version-specific/supported-software/b/BAMM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BAMM BAMM is oriented entirely towards detecting and quantifying heterogeneity in evolutionary rates. It uses reversible jump Markov chain Monte Carlo to automatically explore a vast universe of candidate models of lineage diversification and trait evolution. @@ -7,3 +11,6 @@ BAMM is oriented entirely towards detecting and quantifying heterogeneity in evo version | toolchain --------|---------- ``2.5.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BAMSurgeon.md b/docs/version-specific/supported-software/b/BAMSurgeon.md index cf3443e69..472122b14 100644 --- a/docs/version-specific/supported-software/b/BAMSurgeon.md +++ b/docs/version-specific/supported-software/b/BAMSurgeon.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BAMSurgeon Tools for adding mutations to existing .bam files, used for testing mutation callers @@ -7,3 +11,6 @@ Tools for adding mutations to existing .bam files, used for testing mutation cal version | versionsuffix | toolchain --------|---------------|---------- ``1.2`` | ``-Python-2.7.16`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BAli-Phy.md b/docs/version-specific/supported-software/b/BAli-Phy.md index 2e417a6b2..94ce1e207 100644 --- a/docs/version-specific/supported-software/b/BAli-Phy.md +++ b/docs/version-specific/supported-software/b/BAli-Phy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BAli-Phy BAli-Phy estimates multiple sequence alignments and evolutionary trees from DNA, amino acid, or codon sequences. @@ -7,3 +11,6 @@ BAli-Phy estimates multiple sequence alignments and evolutionary trees from DNA, version | toolchain --------|---------- ``3.6.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BBMap.md b/docs/version-specific/supported-software/b/BBMap.md index a5286d4be..5a959b85d 100644 --- a/docs/version-specific/supported-software/b/BBMap.md +++ b/docs/version-specific/supported-software/b/BBMap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BBMap BBMap short read aligner, and other bioinformatic tools. @@ -21,3 +25,6 @@ version | versionsuffix | toolchain ``38.98`` | | ``GCC/11.2.0`` ``39.01`` | | ``GCC/11.3.0`` ``39.01`` | | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BCALM.md b/docs/version-specific/supported-software/b/BCALM.md index c52aa9e71..e2ec46965 100644 --- a/docs/version-specific/supported-software/b/BCALM.md +++ b/docs/version-specific/supported-software/b/BCALM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BCALM de Bruijn graph compaction in low memory @@ -7,3 +11,6 @@ de Bruijn graph compaction in low memory version | toolchain --------|---------- ``2.2.0`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BCEL.md b/docs/version-specific/supported-software/b/BCEL.md index 93e5cada2..d3fe558d8 100644 --- a/docs/version-specific/supported-software/b/BCEL.md +++ b/docs/version-specific/supported-software/b/BCEL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BCEL The Byte Code Engineering Library (Apache Commons BCEL™) is intended to give users a convenient way to analyze, create, and manipulate (binary) Java class files (those ending with .class). @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``5.2`` | ``-Java-1.8`` | ``system`` ``6.5.0`` | ``-Java-1.8`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BCFtools.md b/docs/version-specific/supported-software/b/BCFtools.md index b7bd118a0..2b623a9f2 100644 --- a/docs/version-specific/supported-software/b/BCFtools.md +++ b/docs/version-specific/supported-software/b/BCFtools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BCFtools Samtools is a suite of programs for interacting with high-throughput sequencing data. BCFtools - Reading/writing BCF2/VCF/gVCF files and calling/filtering/summarising SNP and short indel sequence variants @@ -29,3 +33,6 @@ version | toolchain ``1.9`` | ``foss/2018b`` ``1.9`` | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` ``1.9`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BDBag.md b/docs/version-specific/supported-software/b/BDBag.md index 6a032b95b..94d073acc 100644 --- a/docs/version-specific/supported-software/b/BDBag.md +++ b/docs/version-specific/supported-software/b/BDBag.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BDBag The bdbag utilities are a collection of software programs for working with BagIt packages that conform to the Bagit and Bagit/RO profiles. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.4.1`` | ``-Python-2.7.14`` | ``intel/2018a`` ``1.4.1`` | ``-Python-3.6.4`` | ``intel/2018a`` ``1.6.3`` | | ``intel/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BEDOPS.md b/docs/version-specific/supported-software/b/BEDOPS.md index f5603e0fd..dfe904ce0 100644 --- a/docs/version-specific/supported-software/b/BEDOPS.md +++ b/docs/version-specific/supported-software/b/BEDOPS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BEDOPS BEDOPS is an open-source command-line toolkit that performs highly efficient and scalable Boolean and other set operations, statistical calculations, archiving, conversion and other management of genomic data of arbitrary scale. @@ -15,3 +19,6 @@ version | toolchain ``2.4.32`` | ``intel/2018a`` ``2.4.35`` | ``foss/2018b`` ``2.4.41`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BEDTools.md b/docs/version-specific/supported-software/b/BEDTools.md index 1756d79b6..3d55da098 100644 --- a/docs/version-specific/supported-software/b/BEDTools.md +++ b/docs/version-specific/supported-software/b/BEDTools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BEDTools The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage. The utilities are largely based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM. @@ -29,3 +33,6 @@ version | toolchain ``2.30.0`` | ``GCC/12.2.0`` ``2.30.0`` | ``iccifort/2020.4.304`` ``2.31.0`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BEEF.md b/docs/version-specific/supported-software/b/BEEF.md index a62b264d0..7b055f3e9 100644 --- a/docs/version-specific/supported-software/b/BEEF.md +++ b/docs/version-specific/supported-software/b/BEEF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BEEF BEEF is a library-based implementation of the Bayesian Error Estimation Functional, suitable for linking against by Fortran- or C-based DFT codes. A description of BEEF can be found at http://dx.doi.org/10.1103/PhysRevB.85.235149. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.1.1`` | ``iccifort/2019.5.281`` ``0.1.1`` | ``iccifort/2020.4.304`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BFAST.md b/docs/version-specific/supported-software/b/BFAST.md index eb8072703..0d06a773c 100644 --- a/docs/version-specific/supported-software/b/BFAST.md +++ b/docs/version-specific/supported-software/b/BFAST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BFAST BFAST facilitates the fast and accurate mapping of short reads to reference sequences. Some advantages of BFAST include: 1) Speed: enables billions of short reads to be mapped quickly. 2) Accuracy: A priori probabilities for mapping reads with defined set of variants. 3) An easy way to measurably tune accuracy at the expense of speed. @@ -7,3 +11,6 @@ BFAST facilitates the fast and accurate mapping of short reads to reference sequ version | toolchain --------|---------- ``0.7.0a`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BFC.md b/docs/version-specific/supported-software/b/BFC.md index 5e5b5736f..241da7cf3 100644 --- a/docs/version-specific/supported-software/b/BFC.md +++ b/docs/version-specific/supported-software/b/BFC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BFC BFC is a standalone high-performance tool for correcting sequencing errors from Illumina sequencing data. It is specifically designed for high-coverage whole-genome human data, though also performs well for small genomes. @@ -7,3 +11,6 @@ BFC is a standalone high-performance tool for correcting sequencing errors from version | toolchain --------|---------- ``1`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BGC-Bayesian-genomic-clines.md b/docs/version-specific/supported-software/b/BGC-Bayesian-genomic-clines.md index 3218c275a..3e71d3984 100644 --- a/docs/version-specific/supported-software/b/BGC-Bayesian-genomic-clines.md +++ b/docs/version-specific/supported-software/b/BGC-Bayesian-genomic-clines.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BGC-Bayesian-genomic-clines Collection of code for Bayesian genomic cline analyses. @@ -7,3 +11,6 @@ Collection of code for Bayesian genomic cline analyses. version | toolchain --------|---------- ``1.03`` | ``gompi/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BLACS.md b/docs/version-specific/supported-software/b/BLACS.md index 5b5482420..3fc97db43 100644 --- a/docs/version-specific/supported-software/b/BLACS.md +++ b/docs/version-specific/supported-software/b/BLACS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BLACS The BLACS (Basic Linear Algebra Communication Subprograms) project is an ongoing investigation whose purpose is to create a linear algebra oriented message passing interface that may be implemented efficiently and uniformly across a large range of distributed memory platforms. @@ -7,3 +11,6 @@ The BLACS (Basic Linear Algebra Communication Subprograms) project is an ongoin version | toolchain --------|---------- ``1.1`` | ``gmvapich2/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BLASR.md b/docs/version-specific/supported-software/b/BLASR.md index 9faab3347..feaa8f7df 100644 --- a/docs/version-specific/supported-software/b/BLASR.md +++ b/docs/version-specific/supported-software/b/BLASR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BLASR BLASR (Basic Local Alignment with Successive Refinement) rapidly maps reads to genomes by finding the highest scoring local alignment or set of local alignments between the read and the genome. Optimized for PacBio's extraordinarily long reads and taking advantage of rich quality values, BLASR maps reads rapidly with high accuracy. @@ -9,3 +13,6 @@ version | toolchain ``2.2`` | ``intel/2016b`` ``20170330`` | ``intel/2017a`` ``5.3.3`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BLAST+.md b/docs/version-specific/supported-software/b/BLAST+.md index 5f722ce29..822711f8c 100644 --- a/docs/version-specific/supported-software/b/BLAST+.md +++ b/docs/version-specific/supported-software/b/BLAST+.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BLAST+ Basic Local Alignment Search Tool, or BLAST, is an algorithm for comparing primary biological sequence information, such as the amino-acid sequences of different proteins or the nucleotides of DNA sequences. @@ -33,3 +37,6 @@ version | versionsuffix | toolchain ``2.9.0`` | | ``gompi/2021b`` ``2.9.0`` | | ``iimpi/2019a`` ``2.9.0`` | | ``iimpi/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BLAST.md b/docs/version-specific/supported-software/b/BLAST.md index 4003e79f1..ebc50cf6f 100644 --- a/docs/version-specific/supported-software/b/BLAST.md +++ b/docs/version-specific/supported-software/b/BLAST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BLAST Basic Local Alignment Search Tool, or BLAST, is an algorithm for comparing primary biological sequence information, such as the amino-acid sequences of different proteins or the nucleotides of DNA sequences. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``2.11.0`` | ``-Linux_x86_64`` | ``system`` ``2.2.26`` | ``-Linux_x86_64`` | ``system`` ``2.8.1`` | ``-Linux_x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BLAT.md b/docs/version-specific/supported-software/b/BLAT.md index 1b5a12b92..7ead11aa4 100644 --- a/docs/version-specific/supported-software/b/BLAT.md +++ b/docs/version-specific/supported-software/b/BLAT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BLAT BLAT on DNA is designed to quickly find sequences of 95% and greater similarity of length 25 bases or more. @@ -16,3 +20,6 @@ version | toolchain ``3.7`` | ``GCC/10.3.0`` ``3.7`` | ``GCC/11.2.0`` ``3.7`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BLIS.md b/docs/version-specific/supported-software/b/BLIS.md index c8d6f0f28..ac1849b50 100644 --- a/docs/version-specific/supported-software/b/BLIS.md +++ b/docs/version-specific/supported-software/b/BLIS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BLIS BLIS is a portable software framework for instantiating high-performance BLAS-like dense linear algebra libraries. @@ -27,3 +31,6 @@ version | versionsuffix | toolchain ``3.0.1`` | ``-amd`` | ``GCCcore/10.2.0`` ``3.0.1`` | ``-amd`` | ``GCCcore/10.3.0`` ``3.1`` | ``-amd`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BLT.md b/docs/version-specific/supported-software/b/BLT.md index a0fb224db..e3e90c148 100644 --- a/docs/version-specific/supported-software/b/BLT.md +++ b/docs/version-specific/supported-software/b/BLT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BLT BLT is an extension to the Tk toolkit, adding new widgets, geometry managers, and miscellaneous commands. @@ -7,3 +11,6 @@ BLT is an extension to the Tk toolkit, adding new widgets, geometry managers, a version | toolchain --------|---------- ``20181223`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BMTK.md b/docs/version-specific/supported-software/b/BMTK.md index 297aa3c59..84620fdb3 100644 --- a/docs/version-specific/supported-software/b/BMTK.md +++ b/docs/version-specific/supported-software/b/BMTK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BMTK The Brain Modeling Toolkit (BMTK) is a python-based software package for building, simulating and analyzing large-scale neural network models. It supports the building and simulation of models of varying levels-of-resolution; from multi-compartment biophysically detailed networks, to point-neuron models, to filter-based models, and even population-level firing rate models. @@ -7,3 +11,6 @@ The Brain Modeling Toolkit (BMTK) is a python-based software package for buildin version | toolchain --------|---------- ``1.0.8`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BOINC.md b/docs/version-specific/supported-software/b/BOINC.md index e81043609..1ffd4c16e 100644 --- a/docs/version-specific/supported-software/b/BOINC.md +++ b/docs/version-specific/supported-software/b/BOINC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BOINC BOINC is a program that lets you donate your idle computer time to science projects like SETI@home, Climateprediction.net, Rosetta@home, World Community Grid, and many others. @@ -7,3 +11,6 @@ BOINC is a program that lets you donate your idle computer time to science proje version | versionsuffix | toolchain --------|---------------|---------- ``7.2.42`` | ``-client`` | ``GCC/4.8.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BOPTEST.md b/docs/version-specific/supported-software/b/BOPTEST.md index a3fb17d03..d9828f5d6 100644 --- a/docs/version-specific/supported-software/b/BOPTEST.md +++ b/docs/version-specific/supported-software/b/BOPTEST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BOPTEST This repository contains code for the Building Optimization Performance Test framework (BOPTEST) that is being developed as part of the IBPSA Project 1. @@ -7,3 +11,6 @@ This repository contains code for the Building Optimization Performance Test fra version | toolchain --------|---------- ``0.3.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BRAKER.md b/docs/version-specific/supported-software/b/BRAKER.md index 8c942c88c..d7b5d5b07 100644 --- a/docs/version-specific/supported-software/b/BRAKER.md +++ b/docs/version-specific/supported-software/b/BRAKER.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BRAKER BRAKER is a pipeline for fully automated prediction of protein coding genes with GeneMark-ES/ET and AUGUSTUS in novel eukaryotic genomes. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.1.5`` | ``-Python-3.7.4`` | ``intel/2019b`` ``2.1.6`` | | ``foss/2021b`` ``2.1.6`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BRiAl.md b/docs/version-specific/supported-software/b/BRiAl.md index 45033863f..be408d72c 100644 --- a/docs/version-specific/supported-software/b/BRiAl.md +++ b/docs/version-specific/supported-software/b/BRiAl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BRiAl BRiAl is the legacy version of PolyBoRi maintained by sagemath developers. @@ -7,3 +11,6 @@ BRiAl is the legacy version of PolyBoRi maintained by sagemath developers. version | toolchain --------|---------- ``1.2.12`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BSMAPz.md b/docs/version-specific/supported-software/b/BSMAPz.md index 47d388f4a..b3725f9da 100644 --- a/docs/version-specific/supported-software/b/BSMAPz.md +++ b/docs/version-specific/supported-software/b/BSMAPz.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BSMAPz Updated and optimized fork of BSMAP. BSMAPz is a short reads mapping program for bisulfite sequencing in DNA methylation study. @@ -7,3 +11,6 @@ Updated and optimized fork of BSMAP. BSMAPz is a short reads mapping program for version | versionsuffix | toolchain --------|---------------|---------- ``1.1.1`` | ``-Python-2.7.16`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BSseeker2.md b/docs/version-specific/supported-software/b/BSseeker2.md index a221b9c51..8e2ef6248 100644 --- a/docs/version-specific/supported-software/b/BSseeker2.md +++ b/docs/version-specific/supported-software/b/BSseeker2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BSseeker2 BS-Seeker2 is a seamless and versatile pipeline for accurately and fast mapping the bisulfite-treated reads. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.1.8`` | ``-Python-2.7.16`` | ``GCC/8.3.0`` ``2.1.8`` | ``-Python-2.7.16`` | ``iccifort/2019.5.281`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BUFRLIB.md b/docs/version-specific/supported-software/b/BUFRLIB.md index 867522750..11f0089d9 100644 --- a/docs/version-specific/supported-software/b/BUFRLIB.md +++ b/docs/version-specific/supported-software/b/BUFRLIB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BUFRLIB NCEP BUFRLIB software to encode or decode BUFR messages. It is not intended to be a primer on the BUFR code form itself. @@ -7,3 +11,6 @@ NCEP BUFRLIB software to encode or decode BUFR messages. It is not intended to b version | toolchain --------|---------- ``11.3.0.2`` | ``iccifort/2020.1.217`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BUSCO.md b/docs/version-specific/supported-software/b/BUSCO.md index dee3ba93c..3eb155964 100644 --- a/docs/version-specific/supported-software/b/BUSCO.md +++ b/docs/version-specific/supported-software/b/BUSCO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BUSCO BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``5.4.3`` | | ``foss/2021b`` ``5.4.5`` | | ``foss/2022a`` ``5.4.7`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BUStools.md b/docs/version-specific/supported-software/b/BUStools.md index c0c9ff64f..32150b641 100644 --- a/docs/version-specific/supported-software/b/BUStools.md +++ b/docs/version-specific/supported-software/b/BUStools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BUStools bustools is a program for manipulating BUS files for single cell RNA-Seq datasets. It can be used to error correct barcodes, collapse UMIs, produce gene count or transcript compatibility count matrices, and is useful for many other tasks. See the kallisto | bustools website for examples and instructions on how to use bustools as part of a single-cell RNA-seq workflow. @@ -9,3 +13,6 @@ version | toolchain ``0.40.0`` | ``GCCcore/9.3.0`` ``0.40.0`` | ``foss/2018b`` ``0.43.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BWA.md b/docs/version-specific/supported-software/b/BWA.md index a8dfd0a25..3dfe1d382 100644 --- a/docs/version-specific/supported-software/b/BWA.md +++ b/docs/version-specific/supported-software/b/BWA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BWA Burrows-Wheeler Aligner (BWA) is an efficient program that aligns relatively short nucleotide sequences against a long reference sequence such as the human genome. @@ -37,3 +41,6 @@ version | toolchain ``0.7.17`` | ``intel/2018a`` ``0.7.17`` | ``intel/2018b`` ``0.7.18`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BWISE.md b/docs/version-specific/supported-software/b/BWISE.md index 65156b78d..eabe2031c 100644 --- a/docs/version-specific/supported-software/b/BWISE.md +++ b/docs/version-specific/supported-software/b/BWISE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BWISE de Bruijn Workflow using Integral information of Short pair End reads @@ -7,3 +11,6 @@ de Bruijn Workflow using Integral information of Short pair End reads version | versionsuffix | toolchain --------|---------------|---------- ``20180820`` | ``-Python-3.6.4`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BXH_XCEDE_TOOLS.md b/docs/version-specific/supported-software/b/BXH_XCEDE_TOOLS.md index 79cea3a2e..a5dd10d07 100644 --- a/docs/version-specific/supported-software/b/BXH_XCEDE_TOOLS.md +++ b/docs/version-specific/supported-software/b/BXH_XCEDE_TOOLS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BXH_XCEDE_TOOLS A collection of data processing and image analysis tools for data in BXH or XCEDE format. This includes data format encapsulation/conversion, event-related analysis, QA tools, and more. These tools form the basis of the fBIRN QA procedures and are also distributed as part of the fBIRN Data Upload Scripts. @@ -7,3 +11,6 @@ A collection of data processing and image analysis tools for data in BXH or XCE version | toolchain --------|---------- ``1.11.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BabelStream.md b/docs/version-specific/supported-software/b/BabelStream.md index 4550e7f3d..7262299d3 100644 --- a/docs/version-specific/supported-software/b/BabelStream.md +++ b/docs/version-specific/supported-software/b/BabelStream.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BabelStream STREAM, for lots of devices written in many programming models @@ -7,3 +11,6 @@ STREAM, for lots of devices written in many programming models version | versionsuffix | toolchain --------|---------------|---------- ``3.4`` | ``-omp`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bader.md b/docs/version-specific/supported-software/b/Bader.md index 72c66fdb5..5056cd7d7 100644 --- a/docs/version-specific/supported-software/b/Bader.md +++ b/docs/version-specific/supported-software/b/Bader.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bader A fast algorithm for doing Bader's analysis on a charge density grid. @@ -10,3 +14,6 @@ version | toolchain ``1.03`` | ``intel/2018b`` ``1.04`` | ``GCC/11.2.0`` ``1.04`` | ``iccifort/2020.4.304`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BamTools.md b/docs/version-specific/supported-software/b/BamTools.md index 81e566a64..6b7713a36 100644 --- a/docs/version-specific/supported-software/b/BamTools.md +++ b/docs/version-specific/supported-software/b/BamTools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BamTools BamTools provides both a programmer's API and an end-user's toolkit for handling BAM files. @@ -27,3 +31,6 @@ version | toolchain ``2.5.2`` | ``GCC/11.3.0`` ``2.5.2`` | ``GCC/12.2.0`` ``2.5.2`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BamUtil.md b/docs/version-specific/supported-software/b/BamUtil.md index e8be4cb7c..ac443002e 100644 --- a/docs/version-specific/supported-software/b/BamUtil.md +++ b/docs/version-specific/supported-software/b/BamUtil.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BamUtil BamUtil is a repository that contains several programs that perform operations on SAM/BAM files. All of these programs are built into a single executable, bam. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.13`` | ``intel/2016b`` ``1.0.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bambi.md b/docs/version-specific/supported-software/b/Bambi.md index e7f35f558..6efb26e6b 100644 --- a/docs/version-specific/supported-software/b/Bambi.md +++ b/docs/version-specific/supported-software/b/Bambi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bambi Bambi is a high-level Bayesian model-building interface written in Python. It works with the probabilistic programming frameworks PyMC3 and is designed to make it extremely easy to fit Bayesian mixed-effects models common in biology, social sciences and other disciplines. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.7.1`` | ``foss/2021b`` ``0.7.1`` | ``intel/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bandage.md b/docs/version-specific/supported-software/b/Bandage.md index 8c9afd7ba..3169921c9 100644 --- a/docs/version-specific/supported-software/b/Bandage.md +++ b/docs/version-specific/supported-software/b/Bandage.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bandage Bandage is a program for visualising de novo assembly graphs @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.8.1`` | ``_Ubuntu`` | ``system`` ``0.9.0`` | | ``GCCcore/11.2.0`` ``0.9.0`` | | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bash.md b/docs/version-specific/supported-software/b/Bash.md index 988927bee..324608705 100644 --- a/docs/version-specific/supported-software/b/Bash.md +++ b/docs/version-specific/supported-software/b/Bash.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bash Bash is an sh-compatible command language interpreter that executes commands read from the standard input or from a file. Bash also incorporates useful features from the Korn and C shells (ksh and csh). @@ -7,3 +11,6 @@ Bash is an sh-compatible command language interpreter that executes commands version | toolchain --------|---------- ``4.3`` | ``GCC/4.9.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BatMeth2.md b/docs/version-specific/supported-software/b/BatMeth2.md index 588e5eafe..e01b6a5e8 100644 --- a/docs/version-specific/supported-software/b/BatMeth2.md +++ b/docs/version-specific/supported-software/b/BatMeth2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BatMeth2 An Integrated Package for Bisulfite DNA Methylation Data Analysis with Indel-sensitive Mapping. @@ -7,3 +11,6 @@ An Integrated Package for Bisulfite DNA Methylation Data Analysis with Indel-sen version | toolchain --------|---------- ``2.1`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BayeScEnv.md b/docs/version-specific/supported-software/b/BayeScEnv.md index f8ff34114..9fd868fc1 100644 --- a/docs/version-specific/supported-software/b/BayeScEnv.md +++ b/docs/version-specific/supported-software/b/BayeScEnv.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BayeScEnv BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation. @@ -9,3 +13,6 @@ version | toolchain ``1.1`` | ``GCC/8.3.0`` ``1.1`` | ``foss/2016a`` ``1.1`` | ``iccifort/2019.5.281`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BayeScan.md b/docs/version-specific/supported-software/b/BayeScan.md index 1bf1f5be5..299d6d9e6 100644 --- a/docs/version-specific/supported-software/b/BayeScan.md +++ b/docs/version-specific/supported-software/b/BayeScan.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BayeScan BayeScan aims at identifying candidate loci under natural selection from genetic data, using differences in allele frequencies between populations. @@ -9,3 +13,6 @@ version | toolchain ``2.1`` | ``foss/2016a`` ``2.1`` | ``foss/2018a`` ``2.1`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BayesAss.md b/docs/version-specific/supported-software/b/BayesAss.md index 96096e94c..1c12aea18 100644 --- a/docs/version-specific/supported-software/b/BayesAss.md +++ b/docs/version-specific/supported-software/b/BayesAss.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BayesAss BayesAss: Bayesian Inference of Recent Migration Using Multilocus Genotypes @@ -7,3 +11,6 @@ BayesAss: Bayesian Inference of Recent Migration Using Multilocus Genotypes version | toolchain --------|---------- ``3.0.4`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BayesAss3-SNPs.md b/docs/version-specific/supported-software/b/BayesAss3-SNPs.md index f2959b748..824c0c0c7 100644 --- a/docs/version-specific/supported-software/b/BayesAss3-SNPs.md +++ b/docs/version-specific/supported-software/b/BayesAss3-SNPs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BayesAss3-SNPs Modification of BayesAss 3.0.4 to allow handling of large SNP datasets generated via methods such as RADseq protocols. @@ -7,3 +11,6 @@ Modification of BayesAss 3.0.4 to allow handling of large SNP datasets generated version | toolchain --------|---------- ``1.1`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BayesPrism.md b/docs/version-specific/supported-software/b/BayesPrism.md index 4dace8937..93c827071 100644 --- a/docs/version-specific/supported-software/b/BayesPrism.md +++ b/docs/version-specific/supported-software/b/BayesPrism.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BayesPrism Bayesian cell Proportion Reconstruction Inferred using Statistical Marginalization (BayesPrism): A Fully Bayesian Inference of Tumor Microenvironment composition and gene expression @@ -7,3 +11,6 @@ Bayesian cell Proportion Reconstruction Inferred using Statistical Marginalizati version | versionsuffix | toolchain --------|---------------|---------- ``2.0`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BayesTraits.md b/docs/version-specific/supported-software/b/BayesTraits.md index aecfaa258..481514101 100644 --- a/docs/version-specific/supported-software/b/BayesTraits.md +++ b/docs/version-specific/supported-software/b/BayesTraits.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BayesTraits BayesTraits is a computer package for performing analyses of trait evolution among groups of species for which a phylogeny or sample of phylogenies is available. This new package incoporates our earlier and separate programes Multistate, Discrete and Continuous. BayesTraits can be applied to the analysis of traits that adopt a finite number of discrete states, or to the analysis of continuously varying traits. Hypotheses can be tested about models of evolution, about ancestral states and about correlations among pairs of traits. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.0-linux32`` | | ``system`` ``2.0`` | ``-Beta-Linux64`` | ``system`` ``3.0.2`` | ``-Linux`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bazel.md b/docs/version-specific/supported-software/b/Bazel.md index 1b30c63c1..99b8ce4a9 100644 --- a/docs/version-specific/supported-software/b/Bazel.md +++ b/docs/version-specific/supported-software/b/Bazel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bazel Bazel is a build tool that builds code quickly and reliably. It is used to build the majority of Google's software. @@ -38,3 +42,6 @@ version | versionsuffix | toolchain ``6.1.0`` | | ``GCCcore/12.3.0`` ``6.3.1`` | | ``GCCcore/12.2.0`` ``6.3.1`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Beagle.md b/docs/version-specific/supported-software/b/Beagle.md index 6e797ba2b..a36843510 100644 --- a/docs/version-specific/supported-software/b/Beagle.md +++ b/docs/version-specific/supported-software/b/Beagle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Beagle Beagle is a software package for phasing genotypes and for imputing ungenotyped markers. @@ -7,3 +11,6 @@ Beagle is a software package for phasing genotypes and for imputing ungenotyped version | versionsuffix | toolchain --------|---------------|---------- ``5.4.22Jul22.46e`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Beast.md b/docs/version-specific/supported-software/b/Beast.md index 0aa368de1..0481dba04 100644 --- a/docs/version-specific/supported-software/b/Beast.md +++ b/docs/version-specific/supported-software/b/Beast.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Beast BEAST is a cross-platform program for Bayesian MCMC analysis of molecular sequences. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or relaxed molecular clock models. It can be used as a method of reconstructing phylogenies but is also a framework for testing evolutionary hypotheses without conditioning on a single tree topology. BEAST uses MCMC to average over tree space, so that each tree is weighted proportional to its posterior probability. @@ -19,3 +23,6 @@ version | toolchain ``2.6.4`` | ``GCC/10.2.0`` ``2.6.7`` | ``GCC/10.3.0`` ``2.7.3`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BeautifulSoup.md b/docs/version-specific/supported-software/b/BeautifulSoup.md index 4d315f8fb..175b7c43b 100644 --- a/docs/version-specific/supported-software/b/BeautifulSoup.md +++ b/docs/version-specific/supported-software/b/BeautifulSoup.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BeautifulSoup Beautiful Soup is a Python library designed for quick turnaround projects like screen-scraping. @@ -19,3 +23,6 @@ version | versionsuffix | toolchain ``4.9.1`` | | ``GCCcore/8.3.0`` ``4.9.1`` | ``-Python-3.8.2`` | ``GCCcore/9.3.0`` ``4.9.3`` | | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BerkeleyGW.md b/docs/version-specific/supported-software/b/BerkeleyGW.md index 40845cf54..f2ccb3fdb 100644 --- a/docs/version-specific/supported-software/b/BerkeleyGW.md +++ b/docs/version-specific/supported-software/b/BerkeleyGW.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BerkeleyGW The BerkeleyGW Package is a set of computer codes that calculates the quasiparticle properties and the optical responses of a large variety of materials from bulk periodic crystals to nanostructures such as slabs, wires and molecules. @@ -21,3 +25,6 @@ version | versionsuffix | toolchain ``3.1.0`` | | ``foss/2022a`` ``3.1.0`` | | ``intel/2022a`` ``4.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BgeeCall.md b/docs/version-specific/supported-software/b/BgeeCall.md index af21fcf49..12745a1a3 100644 --- a/docs/version-specific/supported-software/b/BgeeCall.md +++ b/docs/version-specific/supported-software/b/BgeeCall.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BgeeCall Automatic RNA-Seq present/absent gene expression calls generation @@ -7,3 +11,6 @@ Automatic RNA-Seq present/absent gene expression calls generation version | versionsuffix | toolchain --------|---------------|---------- ``1.16.0`` | ``-R-%(rver)s`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BgeeDB.md b/docs/version-specific/supported-software/b/BgeeDB.md index b8d89c214..0aba79318 100644 --- a/docs/version-specific/supported-software/b/BgeeDB.md +++ b/docs/version-specific/supported-software/b/BgeeDB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BgeeDB Annotation and gene expression data retrieval from Bgee database. TopAnat, an anatomical entities Enrichment Analysis tool for UBERON ontology. @@ -7,3 +11,6 @@ Annotation and gene expression data retrieval from Bgee database. TopAnat, an an version | versionsuffix | toolchain --------|---------------|---------- ``2.26.0`` | ``-R-%(rver)s`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BiG-SCAPE.md b/docs/version-specific/supported-software/b/BiG-SCAPE.md index 0ee3f8fad..6ce23f86e 100644 --- a/docs/version-specific/supported-software/b/BiG-SCAPE.md +++ b/docs/version-specific/supported-software/b/BiG-SCAPE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BiG-SCAPE BiG-SCAPE and CORASON provide a set of tools to explore the diversity of biosynthetic gene clusters (BGCs) across large numbers of genomes, by constructing BGC sequence similarity networks, grouping BGCs into gene cluster families, and exploring gene cluster diversity linked to enzyme phylogenies. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.0.1`` | ``-Python-3.7.4`` | ``intel/2019b`` ``1.1.5`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BiasAdjustCXX.md b/docs/version-specific/supported-software/b/BiasAdjustCXX.md index fb6517315..13df56284 100644 --- a/docs/version-specific/supported-software/b/BiasAdjustCXX.md +++ b/docs/version-specific/supported-software/b/BiasAdjustCXX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BiasAdjustCXX BiasAdjustCXX command-line tool for the application of fast and efficient bias corrections in climatic research @@ -7,3 +11,6 @@ BiasAdjustCXX command-line tool for the application of fast and efficient bias c version | toolchain --------|---------- ``1.9.1`` | ``gompi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BigDFT.md b/docs/version-specific/supported-software/b/BigDFT.md index 535898fe7..9ec080dd9 100644 --- a/docs/version-specific/supported-software/b/BigDFT.md +++ b/docs/version-specific/supported-software/b/BigDFT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BigDFT BigDFT: electronic structure calculation based on Daubechies wavelets. bigdft-suite is a set of different packages to run bigdft. @@ -7,3 +11,6 @@ BigDFT: electronic structure calculation based on Daubechies wavelets. bigdft-su version | toolchain --------|---------- ``1.9.1`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BinSanity.md b/docs/version-specific/supported-software/b/BinSanity.md index 96ccd3d6b..af709b54c 100644 --- a/docs/version-specific/supported-software/b/BinSanity.md +++ b/docs/version-specific/supported-software/b/BinSanity.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BinSanity BinSanity contains a suite a scripts designed to cluster contigs generated from metagenomic assembly into putative genomes. @@ -7,3 +11,6 @@ BinSanity contains a suite a scripts designed to cluster contigs generated from version | versionsuffix | toolchain --------|---------------|---------- ``0.3.5`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bio-DB-HTS.md b/docs/version-specific/supported-software/b/Bio-DB-HTS.md index 055e08529..2dc55b330 100644 --- a/docs/version-specific/supported-software/b/Bio-DB-HTS.md +++ b/docs/version-specific/supported-software/b/Bio-DB-HTS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bio-DB-HTS Read files using HTSlib including BAM/CRAM, Tabix and BCF database files @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``3.01`` | | ``GCC/11.3.0`` ``3.01`` | | ``GCC/12.2.0`` ``3.01`` | ``-Perl-5.28.1`` | ``GCC/8.2.0-2.31.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bio-EUtilities.md b/docs/version-specific/supported-software/b/Bio-EUtilities.md index f643f2e35..47d65ff2c 100644 --- a/docs/version-specific/supported-software/b/Bio-EUtilities.md +++ b/docs/version-specific/supported-software/b/Bio-EUtilities.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bio-EUtilities BioPerl low-level API for retrieving and storing data from NCBI eUtils @@ -7,3 +11,6 @@ BioPerl low-level API for retrieving and storing data from NCBI eUtils version | toolchain --------|---------- ``1.76`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bio-FeatureIO.md b/docs/version-specific/supported-software/b/Bio-FeatureIO.md index 33b0f6cd5..6be8f1816 100644 --- a/docs/version-specific/supported-software/b/Bio-FeatureIO.md +++ b/docs/version-specific/supported-software/b/Bio-FeatureIO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bio-FeatureIO An I/O iterator subsystem for genomic sequence features @@ -7,3 +11,6 @@ An I/O iterator subsystem for genomic sequence features version | toolchain --------|---------- ``1.6.905`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bio-SamTools.md b/docs/version-specific/supported-software/b/Bio-SamTools.md index 115832bfd..360967d20 100644 --- a/docs/version-specific/supported-software/b/Bio-SamTools.md +++ b/docs/version-specific/supported-software/b/Bio-SamTools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bio-SamTools This is a Perl interface to the SAMtools sequence alignment interface. @@ -7,3 +11,6 @@ This is a Perl interface to the SAMtools sequence alignment interface. version | versionsuffix | toolchain --------|---------------|---------- ``1.43`` | ``-Perl-5.24.1`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bio-SearchIO-hmmer.md b/docs/version-specific/supported-software/b/Bio-SearchIO-hmmer.md index 524db76e0..40c5434ff 100644 --- a/docs/version-specific/supported-software/b/Bio-SearchIO-hmmer.md +++ b/docs/version-specific/supported-software/b/Bio-SearchIO-hmmer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bio-SearchIO-hmmer Code to parse output from hmmsearch, hmmscan, phmmer and nhmmer, compatible with both version 2 and version 3 of the HMMER package from http://hmmer.org. @@ -11,3 +15,6 @@ version | toolchain ``1.7.3`` | ``GCC/11.2.0`` ``1.7.3`` | ``GCC/11.3.0`` ``1.7.3`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BioPP.md b/docs/version-specific/supported-software/b/BioPP.md index 967182f45..fc67aedc5 100644 --- a/docs/version-specific/supported-software/b/BioPP.md +++ b/docs/version-specific/supported-software/b/BioPP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BioPP Bio++ is a set of C++ libraries for Bioinformatics, including sequence analysis, phylogenetics, molecular evolution and population genetics. Bio++ is Object Oriented and is designed to be both easy to use and computer efficient. Bio++ intends to help programmers to write computer expensive programs, by providing them a set of re-usable tools. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.4.1`` | ``GCC/8.2.0-2.31.1`` ``2.4.1`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BioPerl.md b/docs/version-specific/supported-software/b/BioPerl.md index f3b77cee0..fc5f53ba0 100644 --- a/docs/version-specific/supported-software/b/BioPerl.md +++ b/docs/version-specific/supported-software/b/BioPerl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BioPerl Bioperl is the product of a community effort to produce Perl code which is useful in biology. Examples include Sequence objects, Alignment objects and database searching objects. @@ -25,3 +29,6 @@ version | versionsuffix | toolchain ``1.7.8`` | | ``GCCcore/11.3.0`` ``1.7.8`` | | ``GCCcore/12.2.0`` ``1.7.8`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BioServices.md b/docs/version-specific/supported-software/b/BioServices.md index aef3cb95d..1f6ed2529 100644 --- a/docs/version-specific/supported-software/b/BioServices.md +++ b/docs/version-specific/supported-software/b/BioServices.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BioServices Bioservices is a Python package that provides access to many Bioinformatices Web Services (e.g., UniProt) and a framework to easily implement Web Services wrappers (based on WSDL/SOAP or REST protocols). @@ -7,3 +11,6 @@ Bioservices is a Python package that provides access to many Bioinformatices Web version | versionsuffix | toolchain --------|---------------|---------- ``1.7.9`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Biopython.md b/docs/version-specific/supported-software/b/Biopython.md index 79c628426..924e063b4 100644 --- a/docs/version-specific/supported-software/b/Biopython.md +++ b/docs/version-specific/supported-software/b/Biopython.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Biopython Biopython is a set of freely available tools for biological computation written in Python by an international team of developers. It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. @@ -45,3 +49,6 @@ version | versionsuffix | toolchain ``1.79`` | | ``intel/2021b`` ``1.81`` | | ``foss/2022b`` ``1.83`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BirdNET.md b/docs/version-specific/supported-software/b/BirdNET.md index e34e65828..8b605b415 100644 --- a/docs/version-specific/supported-software/b/BirdNET.md +++ b/docs/version-specific/supported-software/b/BirdNET.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BirdNET BirdNET is a research platform that aims at recognizing birds by sound at scale. We support various hardware and operating systems such as Arduino microcontrollers, the Raspberry Pi, smartphones, web browsers, workstation PCs, and even cloud services. BirdNET is a citizen science platform as well as an analysis software for extremely large collections of audio. BirdNET aims to provide innovative tools for conservationists, biologists, and birders alike. @@ -7,3 +11,6 @@ BirdNET is a research platform that aims at recognizing birds by sound at scale. version | versionsuffix | toolchain --------|---------------|---------- ``20201214`` | ``-Python-3.7.4`` | ``fosscuda/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bismark.md b/docs/version-specific/supported-software/b/Bismark.md index 42125bc39..ae1de6e44 100644 --- a/docs/version-specific/supported-software/b/Bismark.md +++ b/docs/version-specific/supported-software/b/Bismark.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bismark A tool to map bisulfite converted sequence reads and determine cytosine methylation states @@ -12,3 +16,6 @@ version | toolchain ``0.23.1`` | ``foss/2021b`` ``0.24.0`` | ``GCC/11.3.0`` ``0.24.1`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bison.md b/docs/version-specific/supported-software/b/Bison.md index be7721119..ca55eca27 100644 --- a/docs/version-specific/supported-software/b/Bison.md +++ b/docs/version-specific/supported-software/b/Bison.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bison Bison is a general-purpose parser generator that converts an annotated context-free grammar into a deterministic LR or generalized LR (GLR) parser employing LALR(1) parser tables. @@ -85,3 +89,6 @@ version | toolchain ``3.8.2`` | ``GCCcore/14.1.0`` ``3.8.2`` | ``GCCcore/9.5.0`` ``3.8.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Blender.md b/docs/version-specific/supported-software/b/Blender.md index fba4a31aa..3072d3483 100644 --- a/docs/version-specific/supported-software/b/Blender.md +++ b/docs/version-specific/supported-software/b/Blender.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Blender Blender is the free and open source 3D creation suite. It supports the entirety of the 3D pipeline-modeling, rigging, animation, simulation, rendering, compositing and motion tracking, even video editing and game creation. @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``3.5.0`` | ``-linux-x86_64-CUDA-11.7.0`` | ``system`` ``3.6.5`` | ``-linux-x86_64-CUDA-12.1.1`` | ``system`` ``4.0.1`` | ``-linux-x86_64-CUDA-12.1.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Blitz++.md b/docs/version-specific/supported-software/b/Blitz++.md index c509a2c8b..15e6faf3d 100644 --- a/docs/version-specific/supported-software/b/Blitz++.md +++ b/docs/version-specific/supported-software/b/Blitz++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Blitz++ Blitz++ is a (LGPLv3+) licensed meta-template library for array manipulation in C++ with a speed comparable to Fortran implementations, while preserving an object-oriented interface @@ -14,3 +18,6 @@ version | toolchain ``1.0.2`` | ``GCCcore/12.3.0`` ``1.0.2`` | ``GCCcore/13.2.0`` ``1.0.2`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BlobTools.md b/docs/version-specific/supported-software/b/BlobTools.md index 6fa6eb789..f13e03e28 100644 --- a/docs/version-specific/supported-software/b/BlobTools.md +++ b/docs/version-specific/supported-software/b/BlobTools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BlobTools A modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets. @@ -7,3 +11,6 @@ A modular command-line solution for visualisation, quality control and taxonomi version | versionsuffix | toolchain --------|---------------|---------- ``20180528`` | ``-Python-2.7.15`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Block.md b/docs/version-specific/supported-software/b/Block.md index ddcd02a65..523089e0e 100644 --- a/docs/version-specific/supported-software/b/Block.md +++ b/docs/version-specific/supported-software/b/Block.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Block Block implements the density matrix renormalization group (DMRG) algorithm for quantum chemistry. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.5.3-20200525`` | ``foss/2022a`` ``1.5.3-20200525`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Blosc.md b/docs/version-specific/supported-software/b/Blosc.md index 51a68064b..956e6b80f 100644 --- a/docs/version-specific/supported-software/b/Blosc.md +++ b/docs/version-specific/supported-software/b/Blosc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Blosc Blosc, an extremely fast, multi-threaded, meta-compressor library @@ -24,3 +28,6 @@ version | toolchain ``1.21.3`` | ``GCCcore/12.2.0`` ``1.21.5`` | ``GCCcore/12.3.0`` ``1.21.5`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Blosc2.md b/docs/version-specific/supported-software/b/Blosc2.md index 66cad2912..eb7bb769b 100644 --- a/docs/version-specific/supported-software/b/Blosc2.md +++ b/docs/version-specific/supported-software/b/Blosc2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Blosc2 Blosc, an extremely fast, multi-threaded, meta-compressor library @@ -14,3 +18,6 @@ version | toolchain ``2.6.1`` | ``GCCcore/11.3.0`` ``2.8.0`` | ``GCCcore/12.2.0`` ``2.8.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BoltzTraP.md b/docs/version-specific/supported-software/b/BoltzTraP.md index f69a9628e..582068d0e 100644 --- a/docs/version-specific/supported-software/b/BoltzTraP.md +++ b/docs/version-specific/supported-software/b/BoltzTraP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BoltzTraP Boltzmann Transport Properties (BoltzTraP) is a program for calculating the semi-classic transport coefficients. @@ -7,3 +11,6 @@ Boltzmann Transport Properties (BoltzTraP) is a program for calculating the semi version | toolchain --------|---------- ``1.2.5`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BoltzTraP2.md b/docs/version-specific/supported-software/b/BoltzTraP2.md index 549cd7a4e..f169110eb 100644 --- a/docs/version-specific/supported-software/b/BoltzTraP2.md +++ b/docs/version-specific/supported-software/b/BoltzTraP2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BoltzTraP2 BoltzTraP2 provides a numerically stable and efficient method for obtaining analytic representations of electronic bands based on density-functional-theory results for relatively sparse grids. It achieves this goal by using smoothed Fourier interpolation. @@ -7,3 +11,6 @@ BoltzTraP2 provides a numerically stable and efficient method for obtaining anal version | toolchain --------|---------- ``22.12.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bonito.md b/docs/version-specific/supported-software/b/Bonito.md index 8eec76215..931c5adfa 100644 --- a/docs/version-specific/supported-software/b/Bonito.md +++ b/docs/version-specific/supported-software/b/Bonito.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bonito Convolution Basecaller for Oxford Nanopore Reads @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``0.3.5`` | ``-Python-3.7.4`` | ``fosscuda/2019b`` ``0.3.8`` | | ``fosscuda/2020b`` ``0.4.0`` | | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bonmin.md b/docs/version-specific/supported-software/b/Bonmin.md index db0e430e1..198158de4 100644 --- a/docs/version-specific/supported-software/b/Bonmin.md +++ b/docs/version-specific/supported-software/b/Bonmin.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bonmin Ipopt (Interior Point OPTimizer, pronounced eye-pea-Opt) is a software package for large-scale nonlinear optimization. @@ -7,3 +11,6 @@ Ipopt (Interior Point OPTimizer, pronounced eye-pea-Opt) is a software package f version | toolchain --------|---------- ``1.8.7`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bonnie++.md b/docs/version-specific/supported-software/b/Bonnie++.md index 6e747f5d6..073d2255f 100644 --- a/docs/version-specific/supported-software/b/Bonnie++.md +++ b/docs/version-specific/supported-software/b/Bonnie++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bonnie++ Bonnie++-1.97: Enhanced performance Test of Filesystem I/O @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.97`` | ``foss/2016a`` ``2.00a`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Boost.MPI.md b/docs/version-specific/supported-software/b/Boost.MPI.md index 0f2c11681..0286146d6 100644 --- a/docs/version-specific/supported-software/b/Boost.MPI.md +++ b/docs/version-specific/supported-software/b/Boost.MPI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Boost.MPI Boost provides free peer-reviewed portable C++ source libraries. @@ -12,3 +16,6 @@ version | toolchain ``1.79.0`` | ``gompi/2022b`` ``1.81.0`` | ``gompi/2022b`` ``1.82.0`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Boost.Python-NumPy.md b/docs/version-specific/supported-software/b/Boost.Python-NumPy.md index 531ddc97e..bf3ebe940 100644 --- a/docs/version-specific/supported-software/b/Boost.Python-NumPy.md +++ b/docs/version-specific/supported-software/b/Boost.Python-NumPy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Boost.Python-NumPy Boost.Python is a C++ library which enables seamless interoperability between C++ and the Python programming language. @@ -7,3 +11,6 @@ Boost.Python is a C++ library which enables seamless interoperability between C+ version | toolchain --------|---------- ``1.79.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Boost.Python.md b/docs/version-specific/supported-software/b/Boost.Python.md index 342928a9d..12eb5d6df 100644 --- a/docs/version-specific/supported-software/b/Boost.Python.md +++ b/docs/version-specific/supported-software/b/Boost.Python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Boost.Python Boost.Python is a C++ library which enables seamless interoperability between C++ and the Python programming language. @@ -34,3 +38,6 @@ version | versionsuffix | toolchain ``1.77.0`` | | ``GCC/11.2.0`` ``1.79.0`` | | ``GCC/11.3.0`` ``1.83.0`` | | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Boost.md b/docs/version-specific/supported-software/b/Boost.md index be7bd9754..874d4f19b 100644 --- a/docs/version-specific/supported-software/b/Boost.md +++ b/docs/version-specific/supported-software/b/Boost.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Boost Boost provides free peer-reviewed portable C++ source libraries. @@ -100,3 +104,6 @@ version | versionsuffix | toolchain ``1.82.0`` | | ``GCC/12.3.0`` ``1.83.0`` | | ``GCC/13.2.0`` ``1.85.0`` | | ``GCC/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bottleneck.md b/docs/version-specific/supported-software/b/Bottleneck.md index d7a31268b..1ec63aeb1 100644 --- a/docs/version-specific/supported-software/b/Bottleneck.md +++ b/docs/version-specific/supported-software/b/Bottleneck.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bottleneck Fast NumPy array functions written in C @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.3.2`` | ``-Python-3.8.2`` | ``foss/2020a`` ``1.3.6`` | | ``foss/2022a`` ``1.3.7`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bowtie.md b/docs/version-specific/supported-software/b/Bowtie.md index 97accf2bd..3b215c9af 100644 --- a/docs/version-specific/supported-software/b/Bowtie.md +++ b/docs/version-specific/supported-software/b/Bowtie.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bowtie Bowtie is an ultrafast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome. @@ -28,3 +32,6 @@ version | toolchain ``1.3.1`` | ``GCC/10.3.0`` ``1.3.1`` | ``GCC/11.2.0`` ``1.3.1`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bowtie2.md b/docs/version-specific/supported-software/b/Bowtie2.md index 704035285..8ff567f2b 100644 --- a/docs/version-specific/supported-software/b/Bowtie2.md +++ b/docs/version-specific/supported-software/b/Bowtie2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bowtie2 Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or 1,000s of characters, and particularly good at aligning to relatively long (e.g. mammalian) genomes. Bowtie 2 indexes the genome with an FM Index to keep its memory footprint small: for the human genome, its memory footprint is typically around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes. @@ -33,3 +37,6 @@ version | toolchain ``2.5.1`` | ``GCC/10.3.0`` ``2.5.1`` | ``GCC/12.2.0`` ``2.5.1`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bpipe.md b/docs/version-specific/supported-software/b/Bpipe.md index 9a48b429b..c93b65ab2 100644 --- a/docs/version-specific/supported-software/b/Bpipe.md +++ b/docs/version-specific/supported-software/b/Bpipe.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bpipe Bpipe - a tool for running and managing bioinformatics pipelines @@ -7,3 +11,6 @@ Bpipe - a tool for running and managing bioinformatics pipelines version | toolchain --------|---------- ``0.9.9.2`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bracken.md b/docs/version-specific/supported-software/b/Bracken.md index 3899cfe39..6d4338ff6 100644 --- a/docs/version-specific/supported-software/b/Bracken.md +++ b/docs/version-specific/supported-software/b/Bracken.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bracken Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample. Braken uses the taxonomy labels assigned by Kraken, a highly accurate metagenomics classification algorithm, to estimate the number of reads originating from each species present in a sample. Kraken classifies reads to the best matching location in the taxonomic tree, but does not estimate abundances of species. We use the Kraken database itself to derive probabilities that describe how much sequence from each genome is identical to other genomes in the database, and combine this information with the assignments for a particular sample to estimate abundance at the species level, the genus level, or above. Combined with the Kraken classifier, Bracken produces accurate species- and genus-level abundance estimates even when a sample contains two or more near-identical species. NOTE: Bracken is compatible with both Kraken 1 and Kraken 2. However, the default kmer length is different depending on the version of Kraken used. If you use Kraken 1 defaults, specify 31 as the kmer length. If you use Kraken 2 defaults, specify 35 as the kmer length. @@ -10,3 +14,6 @@ version | toolchain ``2.6.2`` | ``GCCcore/11.2.0`` ``2.7`` | ``GCCcore/11.2.0`` ``2.9`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Braindecode.md b/docs/version-specific/supported-software/b/Braindecode.md index 9b94b08b1..ebc1647e9 100644 --- a/docs/version-specific/supported-software/b/Braindecode.md +++ b/docs/version-specific/supported-software/b/Braindecode.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Braindecode Braindecode is an open-source Python toolbox for decoding raw electrophysiological brain data with deep learning models. It includes dataset fetchers, data preprocessing and visualization tools, as well as implementations of several deep learning architectures and data augmentations for analysis of EEG, ECoG and MEG. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.7`` | ``-PyTorch-1.10.0`` | ``foss/2021a`` ``0.8.1`` | ``-PyTorch-2.1.2-CUDA-12.1.1`` | ``foss/2023a`` ``0.8.1`` | ``-PyTorch-2.1.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BreakDancer.md b/docs/version-specific/supported-software/b/BreakDancer.md index a4817d497..3319f0618 100644 --- a/docs/version-specific/supported-software/b/BreakDancer.md +++ b/docs/version-specific/supported-software/b/BreakDancer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BreakDancer BreakDancer is a Perl/C++ package that provides genome-wide detection of structural variants from next generation paired-end sequencing reads @@ -7,3 +11,6 @@ BreakDancer is a Perl/C++ package that provides genome-wide detection of structu version | toolchain --------|---------- ``1.4.5`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Brotli-python.md b/docs/version-specific/supported-software/b/Brotli-python.md index d1bad5cf4..aec7543b9 100644 --- a/docs/version-specific/supported-software/b/Brotli-python.md +++ b/docs/version-specific/supported-software/b/Brotli-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Brotli-python Brotli is a generic-purpose lossless compression algorithm that compresses data using a combination of a modern variant of the LZ77 algorithm, Huffman coding and 2nd order context modeling, with a compression ratio comparable to the best currently available general-purpose compression methods. It is similar in speed with deflate but offers more dense compression. The specification of the Brotli Compressed Data Format is defined in RFC 7932. @@ -12,3 +16,6 @@ version | toolchain ``1.0.9`` | ``GCCcore/12.2.0`` ``1.0.9`` | ``GCCcore/12.3.0`` ``1.1.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Brotli.md b/docs/version-specific/supported-software/b/Brotli.md index 3e5025b90..8030924af 100644 --- a/docs/version-specific/supported-software/b/Brotli.md +++ b/docs/version-specific/supported-software/b/Brotli.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Brotli Brotli is a generic-purpose lossless compression algorithm that compresses data using a combination of a modern variant of the LZ77 algorithm, Huffman coding and 2nd order context modeling, with a compression ratio comparable to the best currently available general-purpose compression methods. It is similar in speed with deflate but offers more dense compression. The specification of the Brotli Compressed Data Format is defined in RFC 7932. @@ -15,3 +19,6 @@ version | toolchain ``1.0.9`` | ``GCCcore/8.3.0`` ``1.1.0`` | ``GCCcore/13.2.0`` ``1.1.0`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Brunsli.md b/docs/version-specific/supported-software/b/Brunsli.md index 5ba53cca6..5d90e5ec5 100644 --- a/docs/version-specific/supported-software/b/Brunsli.md +++ b/docs/version-specific/supported-software/b/Brunsli.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Brunsli Brunsli is a lossless JPEG repacking library. @@ -11,3 +15,6 @@ version | toolchain ``0.1`` | ``GCCcore/11.3.0`` ``0.1`` | ``GCCcore/12.2.0`` ``0.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bsoft.md b/docs/version-specific/supported-software/b/Bsoft.md index 26bdf603e..65ca6aa1c 100644 --- a/docs/version-specific/supported-software/b/Bsoft.md +++ b/docs/version-specific/supported-software/b/Bsoft.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bsoft Bsoft is a collection of programs and a platform for development of software for image and molecular processing in structural biology. Problems in structural biology are approached with a highly modular design, allowing fast development of new algorithms without the burden of issues such as file I/O. It provides an easily accessible interface, a resource that can be and has been used in other packages. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.0.2`` | ``foss/2017b`` ``2.0.7`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/BuDDy.md b/docs/version-specific/supported-software/b/BuDDy.md index 9ede06fc9..fa0a7c184 100644 --- a/docs/version-specific/supported-software/b/BuDDy.md +++ b/docs/version-specific/supported-software/b/BuDDy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # BuDDy A Binary Decision Diagram library, with many highly efficient vectorized BDD operations, dynamic variable reordering, automated garbage collection, a C++ interface with automatic reference counting, and much more. @@ -7,3 +11,6 @@ A Binary Decision Diagram library, with many highly efficient vectorized BDD ope version | toolchain --------|---------- ``2.4`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/Bullet.md b/docs/version-specific/supported-software/b/Bullet.md index ddc4dfb42..0e5c8e986 100644 --- a/docs/version-specific/supported-software/b/Bullet.md +++ b/docs/version-specific/supported-software/b/Bullet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Bullet Bullet professional 3D Game Multiphysics Library provides state of the art collision detection, soft body and rigid body dynamics. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.83.7`` | ``foss/2016a`` ``2.83.7`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/babl.md b/docs/version-specific/supported-software/b/babl.md index dde1c1f7f..2c512b922 100644 --- a/docs/version-specific/supported-software/b/babl.md +++ b/docs/version-specific/supported-software/b/babl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # babl babl is pixel encoding and color space conversion engine in C @@ -7,3 +11,6 @@ babl is pixel encoding and color space conversion engine in C version | toolchain --------|---------- ``0.1.86`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bam-readcount.md b/docs/version-specific/supported-software/b/bam-readcount.md index 771e699ed..d8c4eb7ee 100644 --- a/docs/version-specific/supported-software/b/bam-readcount.md +++ b/docs/version-specific/supported-software/b/bam-readcount.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bam-readcount Count DNA sequence reads in BAM files @@ -10,3 +14,6 @@ version | toolchain ``0.8.0`` | ``GCC/9.3.0`` ``0.8.0`` | ``foss/2018b`` ``1.0.1`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bamFilters.md b/docs/version-specific/supported-software/b/bamFilters.md index c1d5a1052..2a61087d4 100644 --- a/docs/version-specific/supported-software/b/bamFilters.md +++ b/docs/version-specific/supported-software/b/bamFilters.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bamFilters A utility tool to filter alignments from bam files, using identity percent, low complexity and read coverage. @@ -7,3 +11,6 @@ A utility tool to filter alignments from bam files, using identity percent, low version | toolchain --------|---------- ``2022-06-30`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bamtofastq.md b/docs/version-specific/supported-software/b/bamtofastq.md index 27caa321b..c5e0b7c59 100644 --- a/docs/version-specific/supported-software/b/bamtofastq.md +++ b/docs/version-specific/supported-software/b/bamtofastq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bamtofastq Convert 10x BAM files to the original FASTQs compatible with 10x pipelines. @@ -7,3 +11,6 @@ Convert 10x BAM files to the original FASTQs compatible with 10x pipelines. version | toolchain --------|---------- ``1.4.0`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/barrnap.md b/docs/version-specific/supported-software/b/barrnap.md index f3dbca171..ff1a3556e 100644 --- a/docs/version-specific/supported-software/b/barrnap.md +++ b/docs/version-specific/supported-software/b/barrnap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # barrnap Barrnap (BAsic Rapid Ribosomal RNA Predictor) predicts the location of ribosomal RNA genes in genomes. @@ -11,3 +15,6 @@ version | toolchain ``0.9`` | ``gompi/2020b`` ``0.9`` | ``gompi/2021b`` ``0.9`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/basemap.md b/docs/version-specific/supported-software/b/basemap.md index a28eb4716..b6d78508f 100644 --- a/docs/version-specific/supported-software/b/basemap.md +++ b/docs/version-specific/supported-software/b/basemap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # basemap The matplotlib basemap toolkit is a library for plotting 2D data on maps in Python @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``1.2.2`` | ``-Python-3.8.2`` | ``foss/2020a`` ``1.3.6`` | | ``foss/2022a`` ``1.3.9`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bases2fastq.md b/docs/version-specific/supported-software/b/bases2fastq.md index ba2948927..8bf02084b 100644 --- a/docs/version-specific/supported-software/b/bases2fastq.md +++ b/docs/version-specific/supported-software/b/bases2fastq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bases2fastq Bases2Fastq Software demultiplexes sequencing data and converts base calls into FASTQ files for secondary analysis with the FASTQ-compatible software of your choice. The Element AVITI™ System records base calls, which are the main output of a sequencing run, with associated quality scores (Q-scores) in bases files. Bases files must be converted into the FASTQ file format for secondary analysis. To generate QC reports, also load BeautifulSoup and bokeh. @@ -7,3 +11,6 @@ Bases2Fastq Software demultiplexes sequencing data and converts base calls int version | toolchain --------|---------- ``1.5.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bashplotlib.md b/docs/version-specific/supported-software/b/bashplotlib.md index 2d84a3373..5a9463c87 100644 --- a/docs/version-specific/supported-software/b/bashplotlib.md +++ b/docs/version-specific/supported-software/b/bashplotlib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bashplotlib bashplotlib is a python package and command line tool for making basic plots in the terminal. It's a quick way to visualize data when you don't have a GUI. @@ -7,3 +11,6 @@ bashplotlib is a python package and command line tool for making basic plots in version | toolchain --------|---------- ``0.6.5`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bat.md b/docs/version-specific/supported-software/b/bat.md index cdd72e198..54c4a6829 100644 --- a/docs/version-specific/supported-software/b/bat.md +++ b/docs/version-specific/supported-software/b/bat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bat The BAT Python package supports the processing and analysis of Bro data with Pandas, scikit-learn, and Spark @@ -7,3 +11,6 @@ The BAT Python package supports the processing and analysis of Bro data with Pan version | versionsuffix | toolchain --------|---------------|---------- ``0.3.3`` | ``-Python-3.6.3`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/batchgenerators.md b/docs/version-specific/supported-software/b/batchgenerators.md index 00c50f2c2..70fad50df 100644 --- a/docs/version-specific/supported-software/b/batchgenerators.md +++ b/docs/version-specific/supported-software/b/batchgenerators.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # batchgenerators Data augmentation toolkit developed at the Division of Medical Image Computing at the German Cancer Research Center (DKFZ) to suit all our deep learning data augmentation needs. @@ -7,3 +11,6 @@ Data augmentation toolkit developed at the Division of Medical Image Computing a version | toolchain --------|---------- ``0.25`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bbFTP.md b/docs/version-specific/supported-software/b/bbFTP.md index 42339388e..bf2f4f90e 100644 --- a/docs/version-specific/supported-software/b/bbFTP.md +++ b/docs/version-specific/supported-software/b/bbFTP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bbFTP bbFTP is a file transfer software. It implements its own transfer protocol, which is optimized for large files (larger than 2GB) and secure as it does not read the password in a file and encrypts the connection information. bbFTP main features are: * Encoded username and password at connection * SSH and Certificate authentication modules * Multi-stream transfer * Big windows as defined in RFC1323 * On-the-fly data compression * Automatic retry * Customizable time-outs * Transfer simulation * AFS authentication integration * RFIO interface @@ -9,3 +13,6 @@ version | toolchain ``3.2.1`` | ``GCCcore/9.3.0`` ``3.2.1`` | ``intel/2016a`` ``3.2.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bbcp.md b/docs/version-specific/supported-software/b/bbcp.md index a26a4010e..f141e4946 100644 --- a/docs/version-specific/supported-software/b/bbcp.md +++ b/docs/version-specific/supported-software/b/bbcp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bbcp BBCP is an alternative to Gridftp when transferring large amounts of data, capable of breaking up your transfer into multiple simultaneous transferring streams, thereby transferring data much faster than single-streaming utilities such as SCP and SFTP. See details at http://pcbunn.cithep.caltech.edu/bbcp/using_bbcp.htm or http://www.nics.tennessee.edu/computing-resources/data-transfer/bbcp @@ -7,3 +11,6 @@ BBCP is an alternative to Gridftp when transferring large amounts of data, capa version | versionsuffix | toolchain --------|---------------|---------- ``12.01.30.00.0`` | ``-amd64_linux26`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bc.md b/docs/version-specific/supported-software/b/bc.md index 327173114..083a31fd0 100644 --- a/docs/version-specific/supported-software/b/bc.md +++ b/docs/version-specific/supported-software/b/bc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bc bc is an arbitrary precision numeric processing language. @@ -7,3 +11,6 @@ bc is an arbitrary precision numeric processing language. version | toolchain --------|---------- ``1.06.95`` | ``GCC/4.8.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bcbio-gff.md b/docs/version-specific/supported-software/b/bcbio-gff.md index 7680ba247..e3cdd6b2a 100644 --- a/docs/version-specific/supported-software/b/bcbio-gff.md +++ b/docs/version-specific/supported-software/b/bcbio-gff.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bcbio-gff Read and write Generic Feature Format (GFF) with Biopython integration. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.7.0`` | | ``foss/2020b`` ``0.7.0`` | | ``foss/2022a`` ``0.7.0`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bcgTree.md b/docs/version-specific/supported-software/b/bcgTree.md index 8c7b3049f..157ad1641 100644 --- a/docs/version-specific/supported-software/b/bcgTree.md +++ b/docs/version-specific/supported-software/b/bcgTree.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bcgTree Automatized phylogenetic tree building from bacterial core genomes. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.0.10`` | ``-Perl-5.26.1`` | ``intel/2018a`` ``1.1.0`` | ``-Perl-5.28.0`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bcl-convert.md b/docs/version-specific/supported-software/b/bcl-convert.md index 002c4f8ce..9d102ecb0 100644 --- a/docs/version-specific/supported-software/b/bcl-convert.md +++ b/docs/version-specific/supported-software/b/bcl-convert.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bcl-convert The Illumina BCL Convert v4.0 is a standalone local software app that converts the Binary Base Call (BCL) files produced by Illumina sequencing systems to FASTQ files. @@ -7,3 +11,6 @@ The Illumina BCL Convert v4.0 is a standalone local software app that converts t version | versionsuffix | toolchain --------|---------------|---------- ``4.0.3-2`` | ``el7.x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bcl2fastq2.md b/docs/version-specific/supported-software/b/bcl2fastq2.md index 28bf377ab..f1bd9355b 100644 --- a/docs/version-specific/supported-software/b/bcl2fastq2.md +++ b/docs/version-specific/supported-software/b/bcl2fastq2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bcl2fastq2 bcl2fastq Conversion Software both demultiplexes data and converts BCL files generated by Illumina sequencing systems to standard FASTQ file formats for downstream analysis. @@ -18,3 +22,6 @@ version | versionsuffix | toolchain ``2.20.0`` | | ``foss/2018b`` ``2.20.0`` | ``-Python-2.7.14`` | ``intel/2017b`` ``2.20.0`` | | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bcolz.md b/docs/version-specific/supported-software/b/bcolz.md index e19935b5f..0ac09c257 100644 --- a/docs/version-specific/supported-software/b/bcolz.md +++ b/docs/version-specific/supported-software/b/bcolz.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bcolz bcolz provides columnar, chunked data containers that can be compressed either in-memory and on-disk. Column storage allows for efficiently querying tables, as well as for cheap column addition and removal. It is based on NumPy, and uses it as the standard data container to communicate with bcolz objects, but it also comes with support for import/export facilities to/from HDF5/PyTables tables and pandas dataframes. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.1.1`` | ``-Python-2.7.13`` | ``foss/2017a`` ``1.2.1`` | ``-Python-3.8.2`` | ``foss/2020a`` ``1.2.1`` | | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bcrypt.md b/docs/version-specific/supported-software/b/bcrypt.md index 05465dc16..58ad958ef 100644 --- a/docs/version-specific/supported-software/b/bcrypt.md +++ b/docs/version-specific/supported-software/b/bcrypt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bcrypt Acceptable password hashing for your software and your servers (but you should really use argon2id or scrypt) @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``4.0.1`` | ``GCCcore/12.3.0`` ``4.1.3`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/beagle-lib.md b/docs/version-specific/supported-software/b/beagle-lib.md index 5762a1c26..e46ad7faf 100644 --- a/docs/version-specific/supported-software/b/beagle-lib.md +++ b/docs/version-specific/supported-software/b/beagle-lib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # beagle-lib beagle-lib is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics packages. @@ -19,3 +23,6 @@ version | versionsuffix | toolchain ``3.1.2`` | | ``gcccuda/2019b`` ``3.1.2`` | | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` ``4.0.0`` | | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/behave.md b/docs/version-specific/supported-software/b/behave.md index 2fdcd7f4b..0046f4d25 100644 --- a/docs/version-specific/supported-software/b/behave.md +++ b/docs/version-specific/supported-software/b/behave.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # behave behave: Behavior-driven development (or BDD) is an agile software development technique that encourages collaboration between developers, QA and non-technical or business participants in a software project. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.2.5`` | ``-Python-2.7.12`` | ``foss/2016b`` ``1.2.6`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bench.md b/docs/version-specific/supported-software/b/bench.md index 455835f55..2d8c70644 100644 --- a/docs/version-specific/supported-software/b/bench.md +++ b/docs/version-specific/supported-software/b/bench.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bench Tools to accurately benchmark and analyze execution times for R expressions. @@ -7,3 +11,6 @@ Tools to accurately benchmark and analyze execution times for R expressions. version | versionsuffix | toolchain --------|---------------|---------- ``1.1.2`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bgen-reader.md b/docs/version-specific/supported-software/b/bgen-reader.md index 3691043d9..4344d3851 100644 --- a/docs/version-specific/supported-software/b/bgen-reader.md +++ b/docs/version-specific/supported-software/b/bgen-reader.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bgen-reader A bgen file format reader. This python package is a wrapper around the bgen library, a low-memory footprint reader that efficiently reads bgen files. It fully supports the bgen format specifications: 1.2 and 1.3; as well as their optional compressed formats. @@ -7,3 +11,6 @@ A bgen file format reader. This python package is a wrapper around the bgen libr version | versionsuffix | toolchain --------|---------------|---------- ``3.0.2`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bgen.md b/docs/version-specific/supported-software/b/bgen.md index 61a147a2a..b78c73381 100644 --- a/docs/version-specific/supported-software/b/bgen.md +++ b/docs/version-specific/supported-software/b/bgen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bgen A BGEN file format reader. It fully supports the BGEN format specifications 1.2 and 1.3. @@ -9,3 +13,6 @@ version | toolchain ``3.0.2`` | ``GCCcore/7.3.0`` ``3.0.3`` | ``GCCcore/9.3.0`` ``4.1.3`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bibtexparser.md b/docs/version-specific/supported-software/b/bibtexparser.md index b3287611c..19435f2e9 100644 --- a/docs/version-specific/supported-software/b/bibtexparser.md +++ b/docs/version-specific/supported-software/b/bibtexparser.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bibtexparser Bibtex parser in Python 2.7 and 3.x @@ -7,3 +11,6 @@ Bibtex parser in Python 2.7 and 3.x version | toolchain --------|---------- ``1.1.0`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/binutils.md b/docs/version-specific/supported-software/b/binutils.md index 83245f53e..d37b829ad 100644 --- a/docs/version-specific/supported-software/b/binutils.md +++ b/docs/version-specific/supported-software/b/binutils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # binutils binutils: GNU binary utilities @@ -69,3 +73,6 @@ version | toolchain ``2.42`` | ``GCCcore/13.3.0`` ``2.42`` | ``GCCcore/14.1.0`` ``2.42`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bioawk.md b/docs/version-specific/supported-software/b/bioawk.md index 032c1c6c4..9f35adddf 100644 --- a/docs/version-specific/supported-software/b/bioawk.md +++ b/docs/version-specific/supported-software/b/bioawk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bioawk Bioawk is an extension to Brian Kernighan's awk, adding the support of several common biological data formats, including optionally gzip'ed BED, GFF, SAM, VCF, FASTA/Q and TAB-delimited formats with column names. @@ -9,3 +13,6 @@ version | toolchain ``1.0`` | ``GCC/10.3.0`` ``1.0`` | ``GCC/11.2.0`` ``1.0`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/biobakery-workflows.md b/docs/version-specific/supported-software/b/biobakery-workflows.md index 039d884c8..be9df683d 100644 --- a/docs/version-specific/supported-software/b/biobakery-workflows.md +++ b/docs/version-specific/supported-software/b/biobakery-workflows.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # biobakery-workflows bioBakery workflows is a collection of workflows and tasks for executing common microbial community analyses using standardized, validated tools and parameters. Quality control and statistical summary reports are automatically generated for most data types, which include 16S amplicons, metagenomes, and metatranscriptomes. Workflows are run directly from the command line and tasks can be imported to create your own custom workflows. The workflows and tasks are built with AnADAMA2 which allows for parallel task execution locally and in a grid compute environment. @@ -7,3 +11,6 @@ bioBakery workflows is a collection of workflows and tasks for executing common version | toolchain --------|---------- ``3.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/biobambam2.md b/docs/version-specific/supported-software/b/biobambam2.md index 7e9a371f8..a840dc2c0 100644 --- a/docs/version-specific/supported-software/b/biobambam2.md +++ b/docs/version-specific/supported-software/b/biobambam2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # biobambam2 Tools for processing BAM files @@ -9,3 +13,6 @@ version | toolchain ``2.0.185`` | ``GCC/12.3.0`` ``2.0.87`` | ``GCC/11.3.0`` ``2.0.87`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/biogeme.md b/docs/version-specific/supported-software/b/biogeme.md index 7c3e3c14e..f308c0634 100644 --- a/docs/version-specific/supported-software/b/biogeme.md +++ b/docs/version-specific/supported-software/b/biogeme.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # biogeme Biogeme is a open source Python package designed for the maximum likelihood estimation of parametric models in general, with a special emphasis on discrete choice models. @@ -10,3 +14,6 @@ version | toolchain ``3.2.10`` | ``foss/2022a`` ``3.2.6`` | ``foss/2022a`` ``3.2.8`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/biom-format.md b/docs/version-specific/supported-software/b/biom-format.md index c93b5d5f4..96b5b32a5 100644 --- a/docs/version-specific/supported-software/b/biom-format.md +++ b/docs/version-specific/supported-software/b/biom-format.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # biom-format The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium supported project. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``2.1.14`` | | ``foss/2022a`` ``2.1.15`` | | ``foss/2022b`` ``2.1.15`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/biomart-perl.md b/docs/version-specific/supported-software/b/biomart-perl.md index 932f1075a..963ccf8ea 100644 --- a/docs/version-specific/supported-software/b/biomart-perl.md +++ b/docs/version-specific/supported-software/b/biomart-perl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # biomart-perl The BioMart Perl API allows you to go a step further with BioMart and integrate BioMart Perl Code into custom Perl scripts. @@ -7,3 +11,6 @@ The BioMart Perl API allows you to go a step further with BioMart and integrat version | versionsuffix | toolchain --------|---------------|---------- ``0.7_e6db561`` | ``-Perl-5.26.0`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/biscuit.md b/docs/version-specific/supported-software/b/biscuit.md index 01d1ed511..c2e6701b9 100644 --- a/docs/version-specific/supported-software/b/biscuit.md +++ b/docs/version-specific/supported-software/b/biscuit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # biscuit Utilities to help analyze bisulfite-treated sequence data @@ -7,3 +11,6 @@ Utilities to help analyze bisulfite-treated sequence data version | toolchain --------|---------- ``0.1.4`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bitarray.md b/docs/version-specific/supported-software/b/bitarray.md index 3de48d8ca..f12a3cb22 100644 --- a/docs/version-specific/supported-software/b/bitarray.md +++ b/docs/version-specific/supported-software/b/bitarray.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bitarray bitarray provides an object type which efficiently represents an array of booleans @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.8.3`` | ``-Python-3.6.6`` | ``intel/2018b`` ``1.2.1`` | ``-Python-3.7.4`` | ``foss/2019b`` ``1.5.3`` | ``-Python-2.7.16`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bitshuffle.md b/docs/version-specific/supported-software/b/bitshuffle.md index ecf2bdf3e..e534cfc9d 100644 --- a/docs/version-specific/supported-software/b/bitshuffle.md +++ b/docs/version-specific/supported-software/b/bitshuffle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bitshuffle Filter for improving compression of typed binary data. Bitshuffle is an algorithm that rearranges typed, binary data for improving compression, as well as a python/C package that implements this algorithm within the Numpy framework. The library can be used along side HDF5 to compress and decompress datasets and is integrated through the dynamically loaded filters framework. Bitshuffle is HDF5 filter number 32008. @@ -7,3 +11,6 @@ Filter for improving compression of typed binary data. Bitshuffle is an algorith version | toolchain --------|---------- ``0.5.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/blasr_libcpp.md b/docs/version-specific/supported-software/b/blasr_libcpp.md index 1f2a1f2df..260e8d90b 100644 --- a/docs/version-specific/supported-software/b/blasr_libcpp.md +++ b/docs/version-specific/supported-software/b/blasr_libcpp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # blasr_libcpp Blasr_libcpp is a library used by blasr and other executables such as samtoh5, loadPulses for analyzing PacBio sequences @@ -7,3 +11,6 @@ Blasr_libcpp is a library used by blasr and other executables such as samtoh5, l version | toolchain --------|---------- ``20170426`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bmtagger.md b/docs/version-specific/supported-software/b/bmtagger.md index 9f18e8edc..839a09b67 100644 --- a/docs/version-specific/supported-software/b/bmtagger.md +++ b/docs/version-specific/supported-software/b/bmtagger.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bmtagger Best Match Tagger for removing human reads from metagenomics datasets @@ -9,3 +13,6 @@ version | toolchain ``3.101`` | ``foss/2018b`` ``3.101`` | ``gompi/2019a`` ``3.101`` | ``gompi/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bnpy.md b/docs/version-specific/supported-software/b/bnpy.md index 3c220970d..58b650801 100644 --- a/docs/version-specific/supported-software/b/bnpy.md +++ b/docs/version-specific/supported-software/b/bnpy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bnpy Bayesian nonparametric machine learning for python provides code for training popular clustering models on large datasets. The focus is on Bayesian nonparametric models based on the Dirichlet process, but it also provides parametric counterparts. @@ -7,3 +11,6 @@ Bayesian nonparametric machine learning for python provides code for training p version | versionsuffix | toolchain --------|---------------|---------- ``0.1.6`` | ``-Python-2.7.15`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bokeh.md b/docs/version-specific/supported-software/b/bokeh.md index e4129b123..112b4c241 100644 --- a/docs/version-specific/supported-software/b/bokeh.md +++ b/docs/version-specific/supported-software/b/bokeh.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bokeh Statistical and novel interactive HTML plots for Python @@ -27,3 +31,6 @@ version | versionsuffix | toolchain ``3.2.1`` | | ``foss/2022b`` ``3.2.2`` | | ``foss/2023a`` ``3.4.1`` | | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/boost_histogram.md b/docs/version-specific/supported-software/b/boost_histogram.md index 03aa23c83..94370bcb1 100644 --- a/docs/version-specific/supported-software/b/boost_histogram.md +++ b/docs/version-specific/supported-software/b/boost_histogram.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # boost_histogram Boost-histogram is a Python package providing Python bindings for Boost.Histogram. @@ -7,3 +11,6 @@ Boost-histogram is a Python package providing Python bindings for Boost.Histogra version | toolchain --------|---------- ``1.2.1`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/boto3.md b/docs/version-specific/supported-software/b/boto3.md index 655a30349..dd2b0523f 100644 --- a/docs/version-specific/supported-software/b/boto3.md +++ b/docs/version-specific/supported-software/b/boto3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # boto3 Boto3 is the Amazon Web Services (AWS) Software Development Kit (SDK) for Python, which allows Python developers to write software that makes use of services like Amazon S3 and Amazon EC2. @@ -11,3 +15,6 @@ version | toolchain ``1.26.163`` | ``GCCcore/12.2.0`` ``1.26.37`` | ``GCCcore/11.3.0`` ``1.28.70`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bpp.md b/docs/version-specific/supported-software/b/bpp.md index 11929d808..596f8ca4e 100644 --- a/docs/version-specific/supported-software/b/bpp.md +++ b/docs/version-specific/supported-software/b/bpp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bpp The aim of this project is to implement a versatile high-performance version of the BPP software. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``4.3.8`` | ``GCC/8.3.0`` ``4.4.0`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bpytop.md b/docs/version-specific/supported-software/b/bpytop.md index 12bdc2ed9..77e2243ee 100644 --- a/docs/version-specific/supported-software/b/bpytop.md +++ b/docs/version-specific/supported-software/b/bpytop.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bpytop Resource monitor that shows usage and stats for processor, memory, disks, network and processes. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.60`` | ``GCCcore/10.2.0`` ``1.0.67`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/breseq.md b/docs/version-specific/supported-software/b/breseq.md index 895ce1fc8..2b8770245 100644 --- a/docs/version-specific/supported-software/b/breseq.md +++ b/docs/version-specific/supported-software/b/breseq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # breseq breseq is a computational pipeline for the analysis of short-read re-sequencing data @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.35.4`` | ``-R-4.0.0`` | ``foss/2020a`` ``0.36.1`` | | ``foss/2021b`` ``0.38.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bsddb3.md b/docs/version-specific/supported-software/b/bsddb3.md index a0de45660..4a912fd0d 100644 --- a/docs/version-specific/supported-software/b/bsddb3.md +++ b/docs/version-specific/supported-software/b/bsddb3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bsddb3 bsddb3 is a nearly complete Python binding of the Oracle/Sleepycat C API for the Database Environment, Database, Cursor, Log Cursor, Sequence and Transaction objects. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``6.2.6`` | ``-Python-2.7.15`` | ``fosscuda/2018b`` ``6.2.9`` | | ``GCCcore/10.2.0`` ``6.2.9`` | | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/btllib.md b/docs/version-specific/supported-software/b/btllib.md index 2e83ac20c..52c7884cd 100644 --- a/docs/version-specific/supported-software/b/btllib.md +++ b/docs/version-specific/supported-software/b/btllib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # btllib Bioinformatics Technology Lab common code library @@ -7,3 +11,6 @@ Bioinformatics Technology Lab common code library version | toolchain --------|---------- ``1.7.0`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/build.md b/docs/version-specific/supported-software/b/build.md index b57b23a13..affcbe434 100644 --- a/docs/version-specific/supported-software/b/build.md +++ b/docs/version-specific/supported-software/b/build.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # build A simple, correct Python build frontend. @@ -10,3 +14,6 @@ version | toolchain ``0.10.0`` | ``foss/2022b`` ``1.0.3`` | ``foss/2023a`` ``1.0.3`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/buildenv.md b/docs/version-specific/supported-software/b/buildenv.md index ac6bd8cd6..3a9e9e836 100644 --- a/docs/version-specific/supported-software/b/buildenv.md +++ b/docs/version-specific/supported-software/b/buildenv.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # buildenv This module sets a group of environment variables for compilers, linkers, maths libraries, etc., that you can use to easily transition between toolchains when building your software. To query the variables being set please use: module show @@ -42,3 +46,6 @@ version | versionsuffix | toolchain ``default`` | | ``intelcuda/2020a`` ``default`` | | ``intelcuda/2020b`` ``default`` | | ``nvompi/2022.07`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/buildingspy.md b/docs/version-specific/supported-software/b/buildingspy.md index 06822ada3..d45ff4061 100644 --- a/docs/version-specific/supported-software/b/buildingspy.md +++ b/docs/version-specific/supported-software/b/buildingspy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # buildingspy Python modules for automating Modelica simulations and for running unit test for the Buildings library @@ -7,3 +11,6 @@ Python modules for automating Modelica simulations and for running unit test for version | toolchain --------|---------- ``4.0.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bwa-mem2.md b/docs/version-specific/supported-software/b/bwa-mem2.md index 54e48e387..63ddaaa75 100644 --- a/docs/version-specific/supported-software/b/bwa-mem2.md +++ b/docs/version-specific/supported-software/b/bwa-mem2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bwa-mem2 The tool bwa-mem2 is the next version of the bwa-mem algorithm in bwa. It produces alignment identical to bwa and is ~1.3-3.1x faster depending on the use-case, dataset and the running machine. @@ -7,3 +11,6 @@ The tool bwa-mem2 is the next version of the bwa-mem algorithm in bwa. It produc version | toolchain --------|---------- ``2.2.1`` | ``intel-compilers/2023.1.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bwa-meth.md b/docs/version-specific/supported-software/b/bwa-meth.md index 15b774819..e9081b6a7 100644 --- a/docs/version-specific/supported-software/b/bwa-meth.md +++ b/docs/version-specific/supported-software/b/bwa-meth.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bwa-meth Fast and accurante alignment of BS-Seq reads. @@ -9,3 +13,6 @@ version | toolchain ``0.2.2`` | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` ``0.2.2`` | ``iccifort/2019.5.281`` ``0.2.6`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bwakit.md b/docs/version-specific/supported-software/b/bwakit.md index 071df4cd0..2769d48ba 100644 --- a/docs/version-specific/supported-software/b/bwakit.md +++ b/docs/version-specific/supported-software/b/bwakit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bwakit Bwakit is a self-consistent installation-free package of scripts and precompiled binaries, providing an end-to-end solution to read mapping. @@ -7,3 +11,6 @@ Bwakit is a self-consistent installation-free package of scripts and precompiled version | versionsuffix | toolchain --------|---------------|---------- ``0.7.15`` | ``_x64-linux`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bwidget.md b/docs/version-specific/supported-software/b/bwidget.md index ef8994d97..fa0037e82 100644 --- a/docs/version-specific/supported-software/b/bwidget.md +++ b/docs/version-specific/supported-software/b/bwidget.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bwidget The BWidget Toolkit is a high-level Widget Set for Tcl/Tk built using native Tcl/Tk 8.x namespaces. @@ -12,3 +16,6 @@ version | toolchain ``1.9.14`` | ``GCCcore/9.3.0`` ``1.9.15`` | ``GCCcore/11.2.0`` ``1.9.15`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bx-python.md b/docs/version-specific/supported-software/b/bx-python.md index a0a31930b..e3b5a8ed1 100644 --- a/docs/version-specific/supported-software/b/bx-python.md +++ b/docs/version-specific/supported-software/b/bx-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bx-python The bx-python project is a Python library and associated set of scripts to allow for rapid implementation of genome scale analyses. @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``0.8.8`` | ``-Python-3.7.4`` | ``foss/2019b`` ``0.8.9`` | ``-Python-3.8.2`` | ``foss/2020a`` ``0.9.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/byacc.md b/docs/version-specific/supported-software/b/byacc.md index 97daf4dfa..96cb076f6 100644 --- a/docs/version-specific/supported-software/b/byacc.md +++ b/docs/version-specific/supported-software/b/byacc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # byacc Berkeley Yacc (byacc) is generally conceded to be the best yacc variant available. In contrast to bison, it is written to avoid dependencies upon a particular compiler. @@ -10,3 +14,6 @@ version | toolchain ``20160606`` | ``foss/2016b`` ``20160606`` | ``intel/2016b`` ``20170709`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/byobu.md b/docs/version-specific/supported-software/b/byobu.md index 5a3583288..93100f1e5 100644 --- a/docs/version-specific/supported-software/b/byobu.md +++ b/docs/version-specific/supported-software/b/byobu.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # byobu Byobu is an elegant enhancement of the otherwise functional, plain, practical GNU Screen. Byobu includes an enhanced profile, configuration utilities, and system status notifications for the GNU screen window manager as well as the Tmux terminal multiplexer @@ -7,3 +11,6 @@ Byobu is an elegant enhancement of the otherwise functional, plain, practical GN version | toolchain --------|---------- ``5.133`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/bzip2.md b/docs/version-specific/supported-software/b/bzip2.md index 7b9ce0938..2d7e0e889 100644 --- a/docs/version-specific/supported-software/b/bzip2.md +++ b/docs/version-specific/supported-software/b/bzip2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # bzip2 bzip2 is a freely available, patent free, high-quality data compressor. It typically compresses files to within 10% to 15% of the best available techniques (the PPM family of statistical compressors), whilst being around twice as fast at compression and six times faster at decompression. @@ -43,3 +47,6 @@ version | toolchain ``1.0.8`` | ``GCCcore/8.3.0`` ``1.0.8`` | ``GCCcore/9.3.0`` ``1.0.8`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/b/index.md b/docs/version-specific/supported-software/b/index.md index 3b519f677..574febfe2 100644 --- a/docs/version-specific/supported-software/b/index.md +++ b/docs/version-specific/supported-software/b/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (b) +[../0/index.md](0) - [../a/index.md](a) - *b* - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [BA3-SNPS-autotune](BA3-SNPS-autotune.md) * [BabelStream](BabelStream.md) * [babl](babl.md) diff --git a/docs/version-specific/supported-software/c/C3D.md b/docs/version-specific/supported-software/c/C3D.md index 4a98222ad..de9c990f5 100644 --- a/docs/version-specific/supported-software/c/C3D.md +++ b/docs/version-specific/supported-software/c/C3D.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # C3D Convert3D Medical Image Processing Tool @@ -7,3 +11,6 @@ Convert3D Medical Image Processing Tool version | toolchain --------|---------- ``1.0.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CAFE5.md b/docs/version-specific/supported-software/c/CAFE5.md index ed157d4ad..54dea09ad 100644 --- a/docs/version-specific/supported-software/c/CAFE5.md +++ b/docs/version-specific/supported-software/c/CAFE5.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CAFE5 Software for Computational Analysis of gene Family Evolution The purpose of CAFE is to analyze changes in gene family size in a way that accounts for phylogenetic history and provides a statistical foundation for evolutionary inferences. The program uses a birth and death process to model gene gain and loss across a user-specified phylogenetic tree. The distribution of family sizes generated under this model can provide a basis for assessing the significance of the observed family size differences among taxa. @@ -7,3 +11,6 @@ Software for Computational Analysis of gene Family Evolution The purpose of CAF version | toolchain --------|---------- ``5.0.0`` | ``GCC/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CAMPARI.md b/docs/version-specific/supported-software/c/CAMPARI.md index e3aba242c..f5faa5562 100644 --- a/docs/version-specific/supported-software/c/CAMPARI.md +++ b/docs/version-specific/supported-software/c/CAMPARI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CAMPARI CAMPARI is a joint package for performing and analyzing molecular simulations, in particular of systems of biological relevance. It focuses on a wide availability of algorithms for (advanced) sampling and is capable of combining Monte Carlo and molecular dynamics in seamless fashion. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``4.0`` | ``intel/2020b`` ``4.0`` | ``intel/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CAP3.md b/docs/version-specific/supported-software/c/CAP3.md index bbbc1a978..43c71afbf 100644 --- a/docs/version-specific/supported-software/c/CAP3.md +++ b/docs/version-specific/supported-software/c/CAP3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CAP3 CAP3 assembly program @@ -9,3 +13,6 @@ version | toolchain ``20071221-intel-x86`` | ``system`` ``20071221-intel-x86_64`` | ``system`` ``20071221-opteron`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CASA.md b/docs/version-specific/supported-software/c/CASA.md index 7282ef451..9c8e3a6be 100644 --- a/docs/version-specific/supported-software/c/CASA.md +++ b/docs/version-specific/supported-software/c/CASA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CASA CASA, the Common Astronomy Software Applications package, is the primary data processing software for the Atacama Large Millimeter/submillimeter Array (ALMA) and NSF's Karl G. Jansky Very Large Array (VLA), and is frequently used also for other radio telescopes. The CASA software can process data from both single-dish and aperture-synthesis telescopes, and one of its core functionalities is to support the data reduction and imaging pipelines for ALMA, VLA and the VLA Sky Survey (VLASS). @@ -7,3 +11,6 @@ CASA, the Common Astronomy Software Applications package, is the primary data pr version | versionsuffix | toolchain --------|---------------|---------- ``6.5.5-21`` | ``-py3.8`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CASPR.md b/docs/version-specific/supported-software/c/CASPR.md index 12fb84643..207657cd8 100644 --- a/docs/version-specific/supported-software/c/CASPR.md +++ b/docs/version-specific/supported-software/c/CASPR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CASPR Running CASPR is extremely easy and convenient to analyze CRIPR-Cas9 screens using pgRNAs. @@ -7,3 +11,6 @@ Running CASPR is extremely easy and convenient to analyze CRIPR-Cas9 screens usi version | toolchain --------|---------- ``20200730`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CASTEP.md b/docs/version-specific/supported-software/c/CASTEP.md index e5ca0aed8..fc3d885e3 100644 --- a/docs/version-specific/supported-software/c/CASTEP.md +++ b/docs/version-specific/supported-software/c/CASTEP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CASTEP CASTEP is an electronic structure materials modelling code based on density functional theory (DFT), with functionality including geometry optimization molecular dynamics, phonons, NMR chemical shifts and much more. @@ -13,3 +17,6 @@ version | toolchain ``21.1.1`` | ``iomkl/2019b`` ``22.11`` | ``foss/2022a`` ``23.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CAT-BAT.md b/docs/version-specific/supported-software/c/CAT-BAT.md index 5299a8f66..72fe522e0 100644 --- a/docs/version-specific/supported-software/c/CAT-BAT.md +++ b/docs/version-specific/supported-software/c/CAT-BAT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CAT-BAT Tool for taxonomic classification of contigs and metagenome-assembled genomes (MAGs). @@ -7,3 +11,6 @@ Tool for taxonomic classification of contigs and metagenome-assembled genomes (M version | toolchain --------|---------- ``5.2.3`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CAVIAR.md b/docs/version-specific/supported-software/c/CAVIAR.md index 78d201b56..45142a986 100644 --- a/docs/version-specific/supported-software/c/CAVIAR.md +++ b/docs/version-specific/supported-software/c/CAVIAR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CAVIAR CAusal Variants Identication in Associated Regions. A statistical framework that quantifies the probability of each variant to be causal while allowing an arbitrary number of causal variants. @@ -7,3 +11,6 @@ CAusal Variants Identication in Associated Regions. A statistical framework tha version | toolchain --------|---------- ``2.2-20190419`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CBLAS.md b/docs/version-specific/supported-software/c/CBLAS.md index 32d575818..5b02b5f0e 100644 --- a/docs/version-specific/supported-software/c/CBLAS.md +++ b/docs/version-specific/supported-software/c/CBLAS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CBLAS C interface to the BLAS @@ -9,3 +13,6 @@ version | toolchain ``20110120`` | ``foss/2016b`` ``20110120`` | ``intel/2019b`` ``20110120`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CCCL.md b/docs/version-specific/supported-software/c/CCCL.md index fc6b85649..2a90f9f41 100644 --- a/docs/version-specific/supported-software/c/CCCL.md +++ b/docs/version-specific/supported-software/c/CCCL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CCCL CUDA C++ Core Libraries (header only) @@ -7,3 +11,6 @@ CUDA C++ Core Libraries (header only) version | versionsuffix | toolchain --------|---------------|---------- ``2.3.0`` | ``-CUDA-12.1.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CCL.md b/docs/version-specific/supported-software/c/CCL.md index 51300c615..f355bf6b6 100644 --- a/docs/version-specific/supported-software/c/CCL.md +++ b/docs/version-specific/supported-software/c/CCL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CCL Clozure CL (often called CCL for short) is a free Common Lisp implementation with a long history. Some distinguishing features of the implementation include fast compilation speed, native threads, a precise, generational, compacting garbage collector, and a convenient foreign-function interface. @@ -12,3 +16,6 @@ version | toolchain ``1.12.2`` | ``GCCcore/11.3.0`` ``1.12.2`` | ``GCCcore/12.3.0`` ``1.12.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CCfits.md b/docs/version-specific/supported-software/c/CCfits.md index 22565f7f0..4cae72657 100644 --- a/docs/version-specific/supported-software/c/CCfits.md +++ b/docs/version-specific/supported-software/c/CCfits.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CCfits CCfits is an object oriented interface to the cfitsio library. It is designed to make the capabilities of cfitsio available to programmers working in C++. @@ -7,3 +11,6 @@ CCfits is an object oriented interface to the cfitsio library. It is designed to version | toolchain --------|---------- ``2.5`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CD-HIT.md b/docs/version-specific/supported-software/c/CD-HIT.md index 85f9a586a..7917642ee 100644 --- a/docs/version-specific/supported-software/c/CD-HIT.md +++ b/docs/version-specific/supported-software/c/CD-HIT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CD-HIT CD-HIT is a very widely used program for clustering and comparing protein or nucleotide sequences. @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``4.8.1`` | | ``GCC/9.3.0`` ``4.8.1`` | | ``foss/2018b`` ``4.8.1`` | | ``iccifort/2019.5.281`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CDAT.md b/docs/version-specific/supported-software/c/CDAT.md index a6883fa9e..27e554eec 100644 --- a/docs/version-specific/supported-software/c/CDAT.md +++ b/docs/version-specific/supported-software/c/CDAT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CDAT CDAT is a powerful and complete front-end to a rich set of visual-data exploration and analysis capabilities well suited for data analysis problems. @@ -7,3 +11,6 @@ CDAT is a powerful and complete front-end to a rich set of visual-data explorat version | versionsuffix | toolchain --------|---------------|---------- ``8.2.1`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CDBtools.md b/docs/version-specific/supported-software/c/CDBtools.md index ce9cdd993..e0b16e472 100644 --- a/docs/version-specific/supported-software/c/CDBtools.md +++ b/docs/version-specific/supported-software/c/CDBtools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CDBtools CDB (Constant DataBase) indexing and retrieval tools for FASTA files @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.99`` | ``GCC/10.2.0`` ``0.99`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CDFlib.md b/docs/version-specific/supported-software/c/CDFlib.md index 5db25a3ce..bd0eaef64 100644 --- a/docs/version-specific/supported-software/c/CDFlib.md +++ b/docs/version-specific/supported-software/c/CDFlib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CDFlib cdflib is a python module to read/write CDF (Common Data Format .cdf) files without needing to install the CDF NASA library. @@ -7,3 +11,6 @@ cdflib is a python module to read/write CDF (Common Data Format .cdf) files with version | toolchain --------|---------- ``0.4.9`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CDO.md b/docs/version-specific/supported-software/c/CDO.md index 643a048cd..bc60bfd48 100644 --- a/docs/version-specific/supported-software/c/CDO.md +++ b/docs/version-specific/supported-software/c/CDO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CDO CDO is a collection of command line Operators to manipulate and analyse Climate and NWP model Data. @@ -23,3 +27,6 @@ version | toolchain ``2.1.1`` | ``gompi/2021a`` ``2.2.2`` | ``gompi/2023a`` ``2.2.2`` | ``gompi/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CENSO.md b/docs/version-specific/supported-software/c/CENSO.md index d67e88487..a0c58eba0 100644 --- a/docs/version-specific/supported-software/c/CENSO.md +++ b/docs/version-specific/supported-software/c/CENSO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CENSO Commandline Energetic SOrting (CENSO) is a sorting algorithm for efficient evaluation of Structure Ensembles (SE). The input ensemble (or single structure) originating from a CREST[SQM/FF] run can be ranked by free energy at DFT level and/or geometries can be optimized using DFT. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.2.0`` | ``GCCcore/12.3.0`` ``1.2.0`` | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CESM-deps.md b/docs/version-specific/supported-software/c/CESM-deps.md index ba6fc04e8..816dee37c 100644 --- a/docs/version-specific/supported-software/c/CESM-deps.md +++ b/docs/version-specific/supported-software/c/CESM-deps.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CESM-deps CESM is a fully-coupled, community, global climate model that provides state-of-the-art computer simulations of the Earth's past, present, and future climate states. @@ -11,3 +15,6 @@ version | toolchain ``2`` | ``foss/2022a`` ``2`` | ``intel/2018b`` ``2`` | ``iomkl/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CFDEMcoupling.md b/docs/version-specific/supported-software/c/CFDEMcoupling.md index 03af38c6a..fc2fe4434 100644 --- a/docs/version-specific/supported-software/c/CFDEMcoupling.md +++ b/docs/version-specific/supported-software/c/CFDEMcoupling.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CFDEMcoupling CFDEMcoupling is an open source CFD-DEM engine. It provides the possibility to couple the DEM engine LIGGGHTS to a CFD framework. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.8.0`` | ``foss/2018a`` ``3.8.0`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CFITSIO.md b/docs/version-specific/supported-software/c/CFITSIO.md index 27f629a09..e6b619773 100644 --- a/docs/version-specific/supported-software/c/CFITSIO.md +++ b/docs/version-specific/supported-software/c/CFITSIO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CFITSIO CFITSIO is a library of C and Fortran subroutines for reading and writing data files in FITS (Flexible Image Transport System) data format. @@ -25,3 +29,6 @@ version | toolchain ``4.2.0`` | ``GCCcore/12.2.0`` ``4.3.0`` | ``GCCcore/12.3.0`` ``4.3.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CGAL.md b/docs/version-specific/supported-software/c/CGAL.md index 95eac27b7..5f041a8bd 100644 --- a/docs/version-specific/supported-software/c/CGAL.md +++ b/docs/version-specific/supported-software/c/CGAL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CGAL The goal of the CGAL Open Source Project is to provide easy access to efficient and reliable geometric algorithms in the form of a C++ library. @@ -40,3 +44,6 @@ version | versionsuffix | toolchain ``5.5.2`` | | ``GCCcore/12.2.0`` ``5.6`` | | ``GCCcore/12.3.0`` ``5.6.1`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CGNS.md b/docs/version-specific/supported-software/c/CGNS.md index 4aac94849..0e49c4f51 100644 --- a/docs/version-specific/supported-software/c/CGNS.md +++ b/docs/version-specific/supported-software/c/CGNS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CGNS The CGNS system is designed to facilitate the exchange of data between sites and applications, and to help stabilize the archiving of aerodynamic data. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.3.1`` | ``foss/2016b`` ``4.1.0`` | ``intelcuda/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CGmapTools.md b/docs/version-specific/supported-software/c/CGmapTools.md index 57603ad10..7eaacab4f 100644 --- a/docs/version-specific/supported-software/c/CGmapTools.md +++ b/docs/version-specific/supported-software/c/CGmapTools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CGmapTools Command-line Toolset for Bisulfite Sequencing Data Analysis @@ -7,3 +11,6 @@ Command-line Toolset for Bisulfite Sequencing Data Analysis version | toolchain --------|---------- ``0.1.2`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CHASE.md b/docs/version-specific/supported-software/c/CHASE.md index a16cf79f5..b54f55c08 100644 --- a/docs/version-specific/supported-software/c/CHASE.md +++ b/docs/version-specific/supported-software/c/CHASE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CHASE Case-control HAplotype Sharing analyses. Haplotype sharing analyses for genome-wide association studies. @@ -7,3 +11,6 @@ Case-control HAplotype Sharing analyses. Haplotype sharing analyses for genome version | toolchain --------|---------- ``20130626`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CHERAB.md b/docs/version-specific/supported-software/c/CHERAB.md index 182cfd3ed..4e6cb0793 100644 --- a/docs/version-specific/supported-software/c/CHERAB.md +++ b/docs/version-specific/supported-software/c/CHERAB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CHERAB CHERAB is a python library for forward modelling diagnostics based on spectroscopic plasma emission. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``1.3.0`` | | ``intel/2020b`` ``1.4.0`` | | ``foss/2020b`` ``1.4.0`` | | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CIF2Cell.md b/docs/version-specific/supported-software/c/CIF2Cell.md index b886f0e55..d5362a0c0 100644 --- a/docs/version-specific/supported-software/c/CIF2Cell.md +++ b/docs/version-specific/supported-software/c/CIF2Cell.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CIF2Cell CIF2Cell is a tool to generate the geometrical setup for various electronic structure codes from a CIF (Crystallographic Information Framework) file. The program currently supports output for a number of popular electronic structure programs, including ABINIT, ASE, CASTEP, CP2K, CPMD, CRYSTAL09, Elk, EMTO, Exciting, Fleur, FHI-aims, Hutsepot, MOPAC, Quantum Espresso, RSPt, Siesta, SPR-KKR, VASP. Also exports some related formats like .coo, .cfg and .xyz-files. @@ -7,3 +11,6 @@ CIF2Cell is a tool to generate the geometrical setup for various electronic stru version | versionsuffix | toolchain --------|---------------|---------- ``1.2.10`` | ``-Python-2.7.16`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CIRCexplorer.md b/docs/version-specific/supported-software/c/CIRCexplorer.md index d60a3cd81..0167f7a50 100644 --- a/docs/version-specific/supported-software/c/CIRCexplorer.md +++ b/docs/version-specific/supported-software/c/CIRCexplorer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CIRCexplorer CIRCexplorer2 is a comprehensive and integrative circular RNA analysis toolset. @@ -7,3 +11,6 @@ CIRCexplorer2 is a comprehensive and integrative circular RNA analysis toolset. version | versionsuffix | toolchain --------|---------------|---------- ``1.1.10`` | ``-Python-2.7.14`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CIRCexplorer2.md b/docs/version-specific/supported-software/c/CIRCexplorer2.md index 0b224887e..bacb2d104 100644 --- a/docs/version-specific/supported-software/c/CIRCexplorer2.md +++ b/docs/version-specific/supported-software/c/CIRCexplorer2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CIRCexplorer2 CIRCexplorer2 is a comprehensive and integrative circular RNA analysis toolset. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.3.3`` | ``-Python-2.7.14`` | ``intel/2018a`` ``2.3.8`` | ``-Python-2.7.18`` | ``foss/2020b`` ``2.3.8`` | ``-Python-2.7.18`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CIRI-long.md b/docs/version-specific/supported-software/c/CIRI-long.md index 63d2edef9..74062dfdf 100644 --- a/docs/version-specific/supported-software/c/CIRI-long.md +++ b/docs/version-specific/supported-software/c/CIRI-long.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CIRI-long Circular RNA Identification for Long-Reads Nanopore Sequencing Data @@ -7,3 +11,6 @@ Circular RNA Identification for Long-Reads Nanopore Sequencing Data version | toolchain --------|---------- ``1.0.2`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CIRI.md b/docs/version-specific/supported-software/c/CIRI.md index 24bb6272a..e309e33ad 100644 --- a/docs/version-specific/supported-software/c/CIRI.md +++ b/docs/version-specific/supported-software/c/CIRI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CIRI CircRNA Identifier. A de novo circular RNA identification tool @@ -7,3 +11,6 @@ CircRNA Identifier. A de novo circular RNA identification tool version | versionsuffix | toolchain --------|---------------|---------- ``2.0.6`` | ``-Perl-5.26.0`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CIRIquant.md b/docs/version-specific/supported-software/c/CIRIquant.md index 147aa1036..5c60d7adb 100644 --- a/docs/version-specific/supported-software/c/CIRIquant.md +++ b/docs/version-specific/supported-software/c/CIRIquant.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CIRIquant CIRIquant is a comprehensive analysis pipeline for circRNA detection and quantification in RNA-Seq data @@ -7,3 +11,6 @@ CIRIquant is a comprehensive analysis pipeline for circRNA detection and quantif version | versionsuffix | toolchain --------|---------------|---------- ``1.1.2-20221201`` | ``-Python-2.7.18`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CITE-seq-Count.md b/docs/version-specific/supported-software/c/CITE-seq-Count.md index 54645d3ee..07cbfbef0 100644 --- a/docs/version-specific/supported-software/c/CITE-seq-Count.md +++ b/docs/version-specific/supported-software/c/CITE-seq-Count.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CITE-seq-Count A python package that allows to count antibody TAGS from a CITE-seq and/or cell hashing experiment. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.4.3`` | ``-Python-3.6.6`` | ``foss/2018b`` ``1.4.3`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CLAPACK.md b/docs/version-specific/supported-software/c/CLAPACK.md index 818ad7cb6..6304f6f01 100644 --- a/docs/version-specific/supported-software/c/CLAPACK.md +++ b/docs/version-specific/supported-software/c/CLAPACK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CLAPACK C version of LAPACK @@ -9,3 +13,6 @@ version | toolchain ``3.2.1`` | ``GCC/6.4.0-2.28`` ``3.2.1`` | ``iccifort/2017.4.196-GCC-6.4.0-2.28`` ``3.2.1`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CLEAR.md b/docs/version-specific/supported-software/c/CLEAR.md index 7818d0206..87bf17956 100644 --- a/docs/version-specific/supported-software/c/CLEAR.md +++ b/docs/version-specific/supported-software/c/CLEAR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CLEAR Direct comparison of circular and linear RNA expression @@ -7,3 +11,6 @@ Direct comparison of circular and linear RNA expression version | versionsuffix | toolchain --------|---------------|---------- ``20210117`` | ``-Python-2.7.18`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CLEASE.md b/docs/version-specific/supported-software/c/CLEASE.md index ab56af247..cf22a4ace 100644 --- a/docs/version-specific/supported-software/c/CLEASE.md +++ b/docs/version-specific/supported-software/c/CLEASE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CLEASE CLuster Expansion in Atomic Simulation Environment (CLEASE) is a package that automates the cumbersome setup and construction procedure of cluster expansion (CE). It provides a comprehensive list of tools for specifying parameters for CE, generating training structures, fitting effective cluster interaction (ECI) values and running Monte Carlo simulations. @@ -7,3 +11,6 @@ CLuster Expansion in Atomic Simulation Environment (CLEASE) is a package that au version | toolchain --------|---------- ``0.10.6`` | ``intel/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CLHEP.md b/docs/version-specific/supported-software/c/CLHEP.md index a744cecca..53e79bb7c 100644 --- a/docs/version-specific/supported-software/c/CLHEP.md +++ b/docs/version-specific/supported-software/c/CLHEP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CLHEP The CLHEP project is intended to be a set of HEP-specific foundation and utility classes such as random generators, physics vectors, geometry and linear algebra. CLHEP is structured in a set of packages independent of any external package. @@ -25,3 +29,6 @@ version | toolchain ``2.4.5.3`` | ``GCC/11.3.0`` ``2.4.6.2`` | ``GCC/11.3.0`` ``2.4.6.4`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CLIP.md b/docs/version-specific/supported-software/c/CLIP.md index d2f00b934..42391f1d2 100644 --- a/docs/version-specific/supported-software/c/CLIP.md +++ b/docs/version-specific/supported-software/c/CLIP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CLIP CLIP (Contrastive Language-Image Pre-Training) is a neural network trained on a variety of (image, text) pairs. It can be instructed in natural language to predict the most relevant text snippet, given an image, without directly optimizing for the task, similarly to the zero-shot capabilities of GPT-2 and 3. @@ -7,3 +11,6 @@ CLIP (Contrastive Language-Image Pre-Training) is a neural network trained on a version | versionsuffix | toolchain --------|---------------|---------- ``20230220`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CLISP.md b/docs/version-specific/supported-software/c/CLISP.md index 7e258ef5a..c1f9eb7b5 100644 --- a/docs/version-specific/supported-software/c/CLISP.md +++ b/docs/version-specific/supported-software/c/CLISP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CLISP Common Lisp is a high-level, general-purpose, object-oriented, dynamic, functional programming language. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.49`` | ``GCCcore/6.4.0`` ``2.49`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CLooG.md b/docs/version-specific/supported-software/c/CLooG.md index d4ff6f4d6..172a78645 100644 --- a/docs/version-specific/supported-software/c/CLooG.md +++ b/docs/version-specific/supported-software/c/CLooG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CLooG CLooG is a free software and library to generate code for scanning Z-polyhedra. That is, it finds a code (e.g. in C, FORTRAN...) that reaches each integral point of one or more parameterized polyhedra. CLooG has been originally written to solve the code generation problem for optimizing compilers based on the polytope model. Nevertheless it is used now in various area e.g. to build control automata for high-level synthesis or to find the best polynomial approximation of a function. CLooG may help in any situation where scanning polyhedra matters. While the user has full control on generated code quality, CLooG is designed to avoid control overhead and to produce a very effective code. @@ -7,3 +11,6 @@ CLooG is a free software and library to generate code for scanning Z-polyhedra. version | toolchain --------|---------- ``0.18.1`` | ``GCC/4.8.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CMAverse.md b/docs/version-specific/supported-software/c/CMAverse.md index 782eeaf57..bff7fa235 100644 --- a/docs/version-specific/supported-software/c/CMAverse.md +++ b/docs/version-specific/supported-software/c/CMAverse.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CMAverse The R package CMAverse provides a suite of functions for reproducible causal mediation analysis including cmdag for DAG visualization, cmest for statistical modeling and cmsens for sensitivity analysis. @@ -7,3 +11,6 @@ The R package CMAverse provides a suite of functions for reproducible causal med version | toolchain --------|---------- ``20220112`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CMSeq.md b/docs/version-specific/supported-software/c/CMSeq.md index d6f38a504..9d715b300 100644 --- a/docs/version-specific/supported-software/c/CMSeq.md +++ b/docs/version-specific/supported-software/c/CMSeq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CMSeq CMSeq is a set of commands to provide an interface to .bam files for coverage and sequence consensus. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.0.3`` | ``-Python-3.8.2`` | ``foss/2020a`` ``1.0.4`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CMake.md b/docs/version-specific/supported-software/c/CMake.md index 0f2be3b7b..556a32745 100644 --- a/docs/version-specific/supported-software/c/CMake.md +++ b/docs/version-specific/supported-software/c/CMake.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CMake CMake, the cross-platform, open-source build system. CMake is a family of tools designed to build, test and package software. @@ -91,3 +95,6 @@ version | toolchain ``3.9.4`` | ``GCCcore/6.4.0`` ``3.9.5`` | ``GCCcore/6.4.0`` ``3.9.6`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CNT-ILP.md b/docs/version-specific/supported-software/c/CNT-ILP.md index aca2fe6cc..f473612fb 100644 --- a/docs/version-specific/supported-software/c/CNT-ILP.md +++ b/docs/version-specific/supported-software/c/CNT-ILP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CNT-ILP Integer Linear Program for the Copy-Number Tree Problem @@ -7,3 +11,6 @@ Integer Linear Program for the Copy-Number Tree Problem version | toolchain --------|---------- ``20171031`` | ``GCC/8.2.0-2.31.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CNVkit.md b/docs/version-specific/supported-software/c/CNVkit.md index 5ed031652..e3d20989d 100644 --- a/docs/version-specific/supported-software/c/CNVkit.md +++ b/docs/version-specific/supported-software/c/CNVkit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CNVkit A command-line toolkit and Python library for detecting copy number variants and alterations genome-wide from high-throughput sequencing. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.9.3`` | ``-Python-3.6.4`` | ``intel/2018a`` ``0.9.6`` | ``-Python-3.7.2-R-3.6.0`` | ``foss/2019a`` ``0.9.8`` | ``-R-4.0.3`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CNVnator.md b/docs/version-specific/supported-software/c/CNVnator.md index c6ce2133c..c9d8391ec 100644 --- a/docs/version-specific/supported-software/c/CNVnator.md +++ b/docs/version-specific/supported-software/c/CNVnator.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CNVnator a tool for CNV discovery and genotyping from depth-of-coverage by mapped reads @@ -7,3 +11,6 @@ a tool for CNV discovery and genotyping from depth-of-coverage by mapped reads version | toolchain --------|---------- ``0.3.3`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/COBRApy.md b/docs/version-specific/supported-software/c/COBRApy.md index 588f9968f..a47528fed 100644 --- a/docs/version-specific/supported-software/c/COBRApy.md +++ b/docs/version-specific/supported-software/c/COBRApy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # COBRApy COBRApy is a package for constraint-based modeling of metabolic networks. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.26.0`` | ``foss/2021a`` ``0.29.0`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CODEX2.md b/docs/version-specific/supported-software/c/CODEX2.md index e459275d0..e9b4cf909 100644 --- a/docs/version-specific/supported-software/c/CODEX2.md +++ b/docs/version-specific/supported-software/c/CODEX2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CODEX2 Full-spectrum copy number variation detection by high-throughput DNA sequencing @@ -7,3 +11,6 @@ Full-spectrum copy number variation detection by high-throughput DNA sequencing version | versionsuffix | toolchain --------|---------------|---------- ``20180227`` | ``-R-3.4.3`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/COMEBin.md b/docs/version-specific/supported-software/c/COMEBin.md index c401909b8..6e1d37286 100644 --- a/docs/version-specific/supported-software/c/COMEBin.md +++ b/docs/version-specific/supported-software/c/COMEBin.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # COMEBin Effective binning of metagenomic contigs using COntrastive Multi-viEw representation learning @@ -7,3 +11,6 @@ Effective binning of metagenomic contigs using COntrastive Multi-viEw representa version | toolchain --------|---------- ``1.0.3-20240310`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/COMSOL.md b/docs/version-specific/supported-software/c/COMSOL.md index df225ba79..092689e69 100644 --- a/docs/version-specific/supported-software/c/COMSOL.md +++ b/docs/version-specific/supported-software/c/COMSOL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # COMSOL COMSOL Multiphysics is a general-purpose software platform, based on advanced numerical methods, for modeling and simulating physics-based problems. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``5.4.0.225`` | ``system`` ``6.2.0.290`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CONCOCT.md b/docs/version-specific/supported-software/c/CONCOCT.md index 6e4e5e2a9..4464dd981 100644 --- a/docs/version-specific/supported-software/c/CONCOCT.md +++ b/docs/version-specific/supported-software/c/CONCOCT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CONCOCT Clustering cONtigs with COverage and ComposiTion (CONCOCT) is a program for unsupervised binning of metagenomic contigs by using nucleotide composition, coverage data in multiple samples and linkage data from paired end reads. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``1.0.0`` | ``-Python-2.7.15`` | ``foss/2018b`` ``1.1.0`` | ``-Python-2.7.15`` | ``foss/2019a`` ``1.1.0`` | ``-Python-2.7.18`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CONN.md b/docs/version-specific/supported-software/c/CONN.md index e6324e16f..bb8e648ab 100644 --- a/docs/version-specific/supported-software/c/CONN.md +++ b/docs/version-specific/supported-software/c/CONN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CONN CONN is an open-source Matlab/SPM-based cross-platform software for the computation, display, and analysis of functional connectivity Magnetic Resonance Imaging (fcMRI). CONN is used to analyze resting state data (rsfMRI) as well as task-related designs. @@ -7,3 +11,6 @@ CONN is an open-source Matlab/SPM-based cross-platform software for the computa version | versionsuffix | toolchain --------|---------------|---------- ``21a`` | ``-MATLAB-2021a`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CP2K.md b/docs/version-specific/supported-software/c/CP2K.md index eb168bdae..59b1337b1 100644 --- a/docs/version-specific/supported-software/c/CP2K.md +++ b/docs/version-specific/supported-software/c/CP2K.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CP2K CP2K is a freely available (GPL) program, written in Fortran 95, to perform atomistic and molecular simulations of solid state, liquid, molecular and biological systems. It provides a general framework for different methods such as e.g. density functional theory (DFT) using a mixed Gaussian and plane waves approach (GPW), and classical pair and many-body potentials. @@ -34,3 +38,6 @@ version | versionsuffix | toolchain ``8.2`` | | ``foss/2021a`` ``8.2`` | | ``intel/2021a`` ``9.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CPB.md b/docs/version-specific/supported-software/c/CPB.md index c37e13566..c33d0fed3 100644 --- a/docs/version-specific/supported-software/c/CPB.md +++ b/docs/version-specific/supported-software/c/CPB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CPB CPB is a novel two-step Pearson correlation based biclustering approach to mine genes that are co-regulated with a given reference gene in order to discover genes that function in a common biological process. In the first step, the algorithm identifies subsets of genes with high correlation, reducing false negatives with a nonparametric filtering scheme. In the second step, biclusters from multiple datasets are used to extract and rank gene correlation information. @@ -7,3 +11,6 @@ CPB is a novel two-step Pearson correlation based biclustering approach to mine version | versionsuffix | toolchain --------|---------------|---------- ``11-4-2011`` | ``-Python-2.7.13`` | ``foss/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CPC2.md b/docs/version-specific/supported-software/c/CPC2.md index 7cdc7844b..3046c1dc2 100644 --- a/docs/version-specific/supported-software/c/CPC2.md +++ b/docs/version-specific/supported-software/c/CPC2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CPC2 a fast and accurate coding potential calculator based on sequence intrinsic features @@ -7,3 +11,6 @@ a fast and accurate coding potential calculator based on sequence intrinsic feat version | toolchain --------|---------- ``1.0.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CPLEX.md b/docs/version-specific/supported-software/c/CPLEX.md index 3ead5bf7f..0dc7d785a 100644 --- a/docs/version-specific/supported-software/c/CPLEX.md +++ b/docs/version-specific/supported-software/c/CPLEX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CPLEX IBM ILOG CPLEX Optimizer's mathematical programming technology enables analytical decision support for improving efficiency, reducing costs, and increasing profitability. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``12.9`` | | ``GCCcore/8.2.0`` ``22.1.1`` | | ``GCCcore/11.2.0`` ``22.1.1`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CPMD.md b/docs/version-specific/supported-software/c/CPMD.md index b4ab389c0..fb0dfbf35 100644 --- a/docs/version-specific/supported-software/c/CPMD.md +++ b/docs/version-specific/supported-software/c/CPMD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CPMD The CPMD code is a parallelized plane wave / pseudopotential implementation of DFT, particularly designed for ab-initio molecular dynamics. @@ -7,3 +11,6 @@ The CPMD code is a parallelized plane wave / pseudopotential implementation of D version | toolchain --------|---------- ``4.3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CPPE.md b/docs/version-specific/supported-software/c/CPPE.md index 68aaebf79..3c0271eb5 100644 --- a/docs/version-specific/supported-software/c/CPPE.md +++ b/docs/version-specific/supported-software/c/CPPE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CPPE CPPE is an open-source, light-weight C++ and Python library for Polarizable Embedding (PE)1,2 calculations. It provides an easy-to-use API to implement PE for ground-state self-consistent field (SCF) calculations and post-SCF methods. A convenient Python interface is also available. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.3.1`` | ``GCC/11.3.0`` ``0.3.1`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CREST.md b/docs/version-specific/supported-software/c/CREST.md index cb46c5dac..3d477637c 100644 --- a/docs/version-specific/supported-software/c/CREST.md +++ b/docs/version-specific/supported-software/c/CREST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CREST CREST is an utility/driver program for the xtb program. Originally it was designed as conformer sampling program, hence the abbreviation Conformer–Rotamer Ensemble Sampling Tool, but now offers also some utility functions for calculations with the GFNn–xTB methods. Generally the program functions as an IO based OMP scheduler (i.e., calculations are performed by the xtb program) and tool for the creation and analysation of structure ensembles. @@ -12,3 +16,6 @@ version | toolchain ``2.12`` | ``intel/2022a`` ``20240319`` | ``gfbf/2023a`` ``3.0.1`` | ``gfbf/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CRF++.md b/docs/version-specific/supported-software/c/CRF++.md index 5a245f81f..485058dc6 100644 --- a/docs/version-specific/supported-software/c/CRF++.md +++ b/docs/version-specific/supported-software/c/CRF++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CRF++ CRF++ is a simple, customizable, and open source implementation of Conditional Random Fields (CRFs) for segmenting/labeling sequential data. CRF++ is designed for generic purpose and will be applied to a variety of NLP tasks, such as Named Entity Recognition, Information Extraction and Text Chunking. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.58`` | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` ``0.58`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CRISPR-DAV.md b/docs/version-specific/supported-software/c/CRISPR-DAV.md index 6d93c444e..6f80447bd 100644 --- a/docs/version-specific/supported-software/c/CRISPR-DAV.md +++ b/docs/version-specific/supported-software/c/CRISPR-DAV.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CRISPR-DAV CRISPR-DAV is a pipeline to analyze amplicon-based NGS data of CRISPR clones in a high throughput manner. @@ -7,3 +11,6 @@ CRISPR-DAV is a pipeline to analyze amplicon-based NGS data of CRISPR clones in version | toolchain --------|---------- ``2.3.4`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CRISPResso2.md b/docs/version-specific/supported-software/c/CRISPResso2.md index 505a67f78..d402a4349 100644 --- a/docs/version-specific/supported-software/c/CRISPResso2.md +++ b/docs/version-specific/supported-software/c/CRISPResso2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CRISPResso2 CRISPResso2 is a software pipeline designed to enable rapid and intuitive interpretation of genome editing experiments. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.0.44`` | ``-Python-2.7.16`` | ``foss/2019b`` ``2.1.2`` | ``-Python-2.7.18`` | ``foss/2020b`` ``2.2.1`` | | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CRPropa.md b/docs/version-specific/supported-software/c/CRPropa.md index 44f3ced76..a5de77c32 100644 --- a/docs/version-specific/supported-software/c/CRPropa.md +++ b/docs/version-specific/supported-software/c/CRPropa.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CRPropa CRPropa is a publicly available code to study the propagation of ultra high energy nuclei up to iron on their voyage through an extra galactic environment. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.1.5`` | ``-Python-3.7.2`` | ``foss/2019a`` ``3.1.6`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CSB.md b/docs/version-specific/supported-software/c/CSB.md index 791926a57..91d64337e 100644 --- a/docs/version-specific/supported-software/c/CSB.md +++ b/docs/version-specific/supported-software/c/CSB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CSB Computational Structural Biology Toolbox CSB is a python library and application framework, which can be used to solve problems in the field of structural bioinformatics. If you are a bioinformatician, software engineer or a researcher working in this field, chances are you may find something useful here. Our package consists of a few major components: 1. Core class library - object-oriented, granular, with an emphasis on design and clean interfaces. 2. Application framework - console applications ("protocols"), which consume objects from the core library in order to build something executable (and hopefully useful). 3. Test framework - ensures that the library actually works. @@ -7,3 +11,6 @@ Computational Structural Biology Toolbox CSB is a python library and application version | toolchain --------|---------- ``1.2.5`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CSBDeep.md b/docs/version-specific/supported-software/c/CSBDeep.md index 4ef72a5ba..df72f82ed 100644 --- a/docs/version-specific/supported-software/c/CSBDeep.md +++ b/docs/version-specific/supported-software/c/CSBDeep.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CSBDeep CSBDeep is a toolbox for Content-aware Image Restoration (CARE). @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.4.1`` | ``-Python-3.7.2`` | ``fosscuda/2019a`` ``0.7.4`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.7.4`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CSBLAST.md b/docs/version-specific/supported-software/c/CSBLAST.md index b287a2b54..c5ae286a6 100644 --- a/docs/version-specific/supported-software/c/CSBLAST.md +++ b/docs/version-specific/supported-software/c/CSBLAST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CSBLAST Context-specific extension of BLAST that significantly improves sensitivity and alignment quality. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.2.3`` | ``GCCcore/8.3.0`` ``2.2.4`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CTPL.md b/docs/version-specific/supported-software/c/CTPL.md index 7e4a2a657..f9c2f51f6 100644 --- a/docs/version-specific/supported-software/c/CTPL.md +++ b/docs/version-specific/supported-software/c/CTPL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CTPL Modern and efficient C++ Thread Pool Library @@ -7,3 +11,6 @@ Modern and efficient C++ Thread Pool Library version | toolchain --------|---------- ``0.0.2`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CUDA-Samples.md b/docs/version-specific/supported-software/c/CUDA-Samples.md index 9dd637103..31b47e0fd 100644 --- a/docs/version-specific/supported-software/c/CUDA-Samples.md +++ b/docs/version-specific/supported-software/c/CUDA-Samples.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CUDA-Samples Samples for CUDA Developers which demonstrates features in CUDA Toolkit @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``11.3`` | ``-CUDA-11.3.1`` | ``GCC/10.3.0`` ``11.6`` | ``-CUDA-11.7.0`` | ``GCC/11.3.0`` ``12.1`` | ``-CUDA-12.1.1`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CUDA.md b/docs/version-specific/supported-software/c/CUDA.md index 68abe262f..fc1eb7ef2 100644 --- a/docs/version-specific/supported-software/c/CUDA.md +++ b/docs/version-specific/supported-software/c/CUDA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CUDA CUDA (formerly Compute Unified Device Architecture) is a parallel computing platform and programming model created by NVIDIA and implemented by the graphics processing units (GPUs) that they produce. CUDA gives developers access to the virtual instruction set and memory of the parallel computational elements in CUDA GPUs. @@ -58,3 +62,6 @@ version | toolchain ``9.2.88`` | ``GCC/6.4.0-2.28`` ``9.2.88`` | ``GCC/7.3.0-2.30`` ``9.2.88`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CUDAcompat.md b/docs/version-specific/supported-software/c/CUDAcompat.md index 1dbe2d812..2ef81f366 100644 --- a/docs/version-specific/supported-software/c/CUDAcompat.md +++ b/docs/version-specific/supported-software/c/CUDAcompat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CUDAcompat Using the CUDA Forward Compatibility package, system administrators can run applications built using a newer toolkit even when an older driver that does not satisfy the minimum required driver version is installed on the system. This forward compatibility allows the CUDA deployments in data centers and enterprises to benefit from the faster release cadence and the latest features and performance of CUDA Toolkit. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``11.7`` | ``-515.65.01`` | ``system`` ``11.7`` | | ``system`` ``11`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CUDAcore.md b/docs/version-specific/supported-software/c/CUDAcore.md index d89b6c5f8..d82a90ebe 100644 --- a/docs/version-specific/supported-software/c/CUDAcore.md +++ b/docs/version-specific/supported-software/c/CUDAcore.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CUDAcore CUDA (formerly Compute Unified Device Architecture) is a parallel computing platform and programming model created by NVIDIA and implemented by the graphics processing units (GPUs) that they produce. CUDA gives developers access to the virtual instruction set and memory of the parallel computational elements in CUDA GPUs. @@ -13,3 +17,6 @@ version | toolchain ``11.3.0`` | ``system`` ``11.4.0`` | ``system`` ``11.5.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CUDD.md b/docs/version-specific/supported-software/c/CUDD.md index 84e2ac307..b2f84eacf 100644 --- a/docs/version-specific/supported-software/c/CUDD.md +++ b/docs/version-specific/supported-software/c/CUDD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CUDD The CUDD package is a package written in C for the manipulation of decision diagrams. It supports binary decision diagrams (BDDs), algebraic decision diagrams (ADDs), and Zero-Suppressed BDDs (ZDDs). @@ -7,3 +11,6 @@ The CUDD package is a package written in C for the manipulation of decision dia version | toolchain --------|---------- ``3.0.0`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CUTLASS.md b/docs/version-specific/supported-software/c/CUTLASS.md index 46f5b50b8..1f6ec88c0 100644 --- a/docs/version-specific/supported-software/c/CUTLASS.md +++ b/docs/version-specific/supported-software/c/CUTLASS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CUTLASS CUTLASS is a collection of CUDA C++ template abstractions for implementing high-performance matrix-matrix multiplication (GEMM) and related computations at all levels and scales within CUDA. It incorporates strategies for hierarchical decomposition and data movement similar to those used to implement cuBLAS and cuDNN. CUTLASS decomposes these "moving parts" into reusable, modular software components abstracted by C++ template classes. Primitives for different levels of a conceptual parallelization hierarchy can be specialized and tuned via custom tiling sizes, data types, and other algorithmic policy. The resulting flexibility simplifies their use as building blocks within custom kernels and applications. @@ -7,3 +11,6 @@ CUTLASS is a collection of CUDA C++ template abstractions for implementing high- version | versionsuffix | toolchain --------|---------------|---------- ``2.11.0`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CUnit.md b/docs/version-specific/supported-software/c/CUnit.md index 1527306a4..186c53e59 100644 --- a/docs/version-specific/supported-software/c/CUnit.md +++ b/docs/version-specific/supported-software/c/CUnit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CUnit Automated testing framework for C. @@ -10,3 +14,6 @@ version | toolchain ``2.1-3`` | ``GCCcore/11.3.0`` ``2.1-3`` | ``GCCcore/12.3.0`` ``2.1-3`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CVX.md b/docs/version-specific/supported-software/c/CVX.md index 16bcafbcd..a9399eab9 100644 --- a/docs/version-specific/supported-software/c/CVX.md +++ b/docs/version-specific/supported-software/c/CVX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CVX CVX is a Matlab-based modeling system for convex optimization. CVX turns Matlab into a modeling language, allowing constraints and objectives to be specified using standard Matlab expression syntax. @@ -7,3 +11,6 @@ CVX is a Matlab-based modeling system for convex optimization. CVX turns Matlab version | versionsuffix | toolchain --------|---------------|---------- ``2.2`` | ``-MATLAB-2023a`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CVXOPT.md b/docs/version-specific/supported-software/c/CVXOPT.md index 3b2f536f6..8cff7bae8 100644 --- a/docs/version-specific/supported-software/c/CVXOPT.md +++ b/docs/version-specific/supported-software/c/CVXOPT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CVXOPT CVXOPT is a free software package for convex optimization based on the Python programming language. Its main purpose is to make the development of software for convex optimization applications straightforward by building on Python's extensive standard library and on the strengths of Python as a high-level programming language. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``1.2.6`` | | ``foss/2020b`` ``1.2.6`` | | ``foss/2021a`` ``1.3.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CVXPY.md b/docs/version-specific/supported-software/c/CVXPY.md index 23f05f5fa..9d809f4e5 100644 --- a/docs/version-specific/supported-software/c/CVXPY.md +++ b/docs/version-specific/supported-software/c/CVXPY.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CVXPY CVXPY is a Python-embedded modeling language for convex optimization problems. It allows you to express your problem in a natural way that follows the math, rather than in the restrictive standard form required by solvers. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.0.28`` | ``-Python-3.7.4`` | ``foss/2019b`` ``1.3.0`` | | ``foss/2022a`` ``1.4.2`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CVglasso.md b/docs/version-specific/supported-software/c/CVglasso.md index 33b980485..a1df68bf1 100644 --- a/docs/version-specific/supported-software/c/CVglasso.md +++ b/docs/version-specific/supported-software/c/CVglasso.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CVglasso CVglasso is an R package that estimates a lasso-penalized precision matrix via block-wise coordinate descent – also known as the graphical lasso (glasso) algorithm. @@ -7,3 +11,6 @@ CVglasso is an R package that estimates a lasso-penalized precision matrix via version | versionsuffix | toolchain --------|---------------|---------- ``1.0`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CWIPI.md b/docs/version-specific/supported-software/c/CWIPI.md index 6f2e84e97..3dd5be543 100644 --- a/docs/version-specific/supported-software/c/CWIPI.md +++ b/docs/version-specific/supported-software/c/CWIPI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CWIPI CWIPI (Coupling With Interpolation Parallel Interface) library helps in chaining and coupling codes. Provides exchanges of interpolated fields through a non-compliant geometric interface and allows control of the coupling algorithm using control parameters. CWIPI takes advantage of the distribution of the definition of the coupling algorithm in the different codes. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.12.0`` | ``gompi/2021a`` ``0.12.0`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CaDiCaL.md b/docs/version-specific/supported-software/c/CaDiCaL.md index 96a324dca..2564e8949 100644 --- a/docs/version-specific/supported-software/c/CaDiCaL.md +++ b/docs/version-specific/supported-software/c/CaDiCaL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CaDiCaL CaDiCaL is a simplified satisfiability solver. The original goal of the development of CaDiCaL was to obtain a CDCL solver, which is easy to understand and change, while at the same time not being much slower than other state-of-the-art CDCL solvers. @@ -7,3 +11,6 @@ CaDiCaL is a simplified satisfiability solver. The original goal of the developm version | toolchain --------|---------- ``1.3.0`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CaSpER.md b/docs/version-specific/supported-software/c/CaSpER.md index 1edad9142..1f412acc4 100644 --- a/docs/version-specific/supported-software/c/CaSpER.md +++ b/docs/version-specific/supported-software/c/CaSpER.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CaSpER CaSpER is a signal processing approach for identification, visualization, and integrative analysis of focal and large-scale CNV events in multiscale resolution using either bulk or single-cell RNA sequencing data. @@ -7,3 +11,6 @@ CaSpER is a signal processing approach for identification, visualization, and in version | toolchain --------|---------- ``2.0`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CaVEMan.md b/docs/version-specific/supported-software/c/CaVEMan.md index c6d84a85b..4be4d401e 100644 --- a/docs/version-specific/supported-software/c/CaVEMan.md +++ b/docs/version-specific/supported-software/c/CaVEMan.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CaVEMan SNV expectation maximisation based mutation calling algorithm aimed at detecting somatic mutations in paired (tumour/normal) cancer samples. Supports both bam and cram format via htslib @@ -7,3 +11,6 @@ SNV expectation maximisation based mutation calling algorithm aimed at detecti version | toolchain --------|---------- ``1.13.2`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Caffe.md b/docs/version-specific/supported-software/c/Caffe.md index 52104c588..ea342df97 100644 --- a/docs/version-specific/supported-software/c/Caffe.md +++ b/docs/version-specific/supported-software/c/Caffe.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Caffe Caffe is a deep learning framework made with expression, speed, and modularity in mind. It is developed by the Berkeley Vision and Learning Center (BVLC) and community contributors. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.0`` | ``-CUDA-9.1.85-Python-2.7.14`` | ``intel/2017b`` ``1.0`` | ``-Python-2.7.14`` | ``intel/2017b`` ``rc3`` | ``-CUDA-7.5.18-Python-2.7.11`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Calcam.md b/docs/version-specific/supported-software/c/Calcam.md index 7bdf030f3..a2598be09 100644 --- a/docs/version-specific/supported-software/c/Calcam.md +++ b/docs/version-specific/supported-software/c/Calcam.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Calcam Calcam is a Python package providing tools for spatial calibration of cameras, i.e. determining the mapping between pixel coordinates in an image and real-world 3D sight lines & coordinates. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.1.0`` | ``-Python-2.7.14`` | ``intel/2018a`` ``2.1.0`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CalculiX-CrunchiX.md b/docs/version-specific/supported-software/c/CalculiX-CrunchiX.md index 90b2a0a0d..88457a5c1 100644 --- a/docs/version-specific/supported-software/c/CalculiX-CrunchiX.md +++ b/docs/version-specific/supported-software/c/CalculiX-CrunchiX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CalculiX-CrunchiX A Free Software Three-Dimensional Structural Finite Element Program @@ -9,3 +13,6 @@ version | toolchain ``2.20`` | ``foss/2021a`` ``2.20`` | ``foss/2022b`` ``2.20`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Calendrical.md b/docs/version-specific/supported-software/c/Calendrical.md index e19932b76..59a0f2347 100644 --- a/docs/version-specific/supported-software/c/Calendrical.md +++ b/docs/version-specific/supported-software/c/Calendrical.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Calendrical Calendrical module is for calendrical calculations. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.0.1`` | ``-Python-3.6.3`` | ``intel/2017b`` ``2.0.2a`` | ``-Python-3.6.4`` | ``intel/2018a`` ``2.0.2a`` | ``-Python-3.6.6`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Calib.md b/docs/version-specific/supported-software/c/Calib.md index bda70e022..563bcf526 100644 --- a/docs/version-specific/supported-software/c/Calib.md +++ b/docs/version-specific/supported-software/c/Calib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Calib Calib clusters paired-end reads using their barcodes and sequences. Calib is suitable for amplicon sequencing where a molecule is tagged, then PCR amplified with high depth, also known as Unique Molecule Identifier (UMI) sequencing. @@ -7,3 +11,6 @@ Calib clusters paired-end reads using their barcodes and sequences. Calib is sui version | toolchain --------|---------- ``0.3.4`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Cantera.md b/docs/version-specific/supported-software/c/Cantera.md index ba5088c3b..c408004d8 100644 --- a/docs/version-specific/supported-software/c/Cantera.md +++ b/docs/version-specific/supported-software/c/Cantera.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Cantera Chemical kinetics, thermodynamics, and transport tool suite @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``2.4.0`` | ``-Python-2.7.14`` | ``intel/2018a`` ``2.6.0`` | | ``foss/2022a`` ``3.0.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Canvas.md b/docs/version-specific/supported-software/c/Canvas.md index d091a5b29..149a661b0 100644 --- a/docs/version-specific/supported-software/c/Canvas.md +++ b/docs/version-specific/supported-software/c/Canvas.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Canvas Copy number variant (CNV) calling from DNA sequencing data @@ -7,3 +11,6 @@ Copy number variant (CNV) calling from DNA sequencing data version | toolchain --------|---------- ``1.39.0.1598`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CapnProto.md b/docs/version-specific/supported-software/c/CapnProto.md index b72e31f7e..8adb622a2 100644 --- a/docs/version-specific/supported-software/c/CapnProto.md +++ b/docs/version-specific/supported-software/c/CapnProto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CapnProto Cap’n Proto is an insanely fast data interchange format and capability-based RPC system. @@ -16,3 +20,6 @@ version | toolchain ``0.9.1`` | ``GCCcore/11.2.0`` ``1.0.1`` | ``GCCcore/12.3.0`` ``1.0.1.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Cargo.md b/docs/version-specific/supported-software/c/Cargo.md index 1e53ff86d..5b90103e9 100644 --- a/docs/version-specific/supported-software/c/Cargo.md +++ b/docs/version-specific/supported-software/c/Cargo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Cargo The Rust package manager @@ -7,3 +11,6 @@ The Rust package manager version | toolchain --------|---------- ``0.13.0`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Carma.md b/docs/version-specific/supported-software/c/Carma.md index 96165a00c..c3c506196 100644 --- a/docs/version-specific/supported-software/c/Carma.md +++ b/docs/version-specific/supported-software/c/Carma.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Carma Carma - A molecular dynamics analysis program @@ -7,3 +11,6 @@ Carma - A molecular dynamics analysis program version | toolchain --------|---------- ``2.01`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Cartopy.md b/docs/version-specific/supported-software/c/Cartopy.md index ce4f5ecf6..a62920fab 100644 --- a/docs/version-specific/supported-software/c/Cartopy.md +++ b/docs/version-specific/supported-software/c/Cartopy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Cartopy Cartopy is a Python package designed to make drawing maps for data analysis and visualisation easy. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``0.20.3`` | | ``foss/2021b`` ``0.20.3`` | | ``foss/2022a`` ``0.22.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Casanovo.md b/docs/version-specific/supported-software/c/Casanovo.md index 61dfb1bf3..65f6e0f65 100644 --- a/docs/version-specific/supported-software/c/Casanovo.md +++ b/docs/version-specific/supported-software/c/Casanovo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Casanovo De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.3.0`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``3.3.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Cassiopeia.md b/docs/version-specific/supported-software/c/Cassiopeia.md index 1478dc914..d9e613234 100644 --- a/docs/version-specific/supported-software/c/Cassiopeia.md +++ b/docs/version-specific/supported-software/c/Cassiopeia.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Cassiopeia A Package for Cas9-Enabled Single Cell Lineage Tracing Tree Reconstruction. @@ -7,3 +11,6 @@ A Package for Cas9-Enabled Single Cell Lineage Tracing Tree Reconstruction. version | toolchain --------|---------- ``2.0.0`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CastXML.md b/docs/version-specific/supported-software/c/CastXML.md index 76c1c9c94..84dc8ab67 100644 --- a/docs/version-specific/supported-software/c/CastXML.md +++ b/docs/version-specific/supported-software/c/CastXML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CastXML CastXML is a C-family abstract syntax tree XML output tool. @@ -9,3 +13,6 @@ version | toolchain ``0.4.3`` | ``GCCcore/8.3.0`` ``20160617`` | ``foss/2016a`` ``20180806`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CatBoost.md b/docs/version-specific/supported-software/c/CatBoost.md index 007c63285..2b31fb5dd 100644 --- a/docs/version-specific/supported-software/c/CatBoost.md +++ b/docs/version-specific/supported-software/c/CatBoost.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CatBoost CatBoost is a high-performance open source library for gradient boosting on decision trees @@ -7,3 +11,6 @@ CatBoost is a high-performance open source library for gradient boosting on deci version | toolchain --------|---------- ``1.2`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CatLearn.md b/docs/version-specific/supported-software/c/CatLearn.md index 610628052..acb45773c 100644 --- a/docs/version-specific/supported-software/c/CatLearn.md +++ b/docs/version-specific/supported-software/c/CatLearn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CatLearn An environment for atomistic machine learning in Python for applications in catalysis @@ -7,3 +11,6 @@ An environment for atomistic machine learning in Python for applications in cata version | toolchain --------|---------- ``0.6.2`` | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CatMAP.md b/docs/version-specific/supported-software/c/CatMAP.md index 88d7541fd..e2083d767 100644 --- a/docs/version-specific/supported-software/c/CatMAP.md +++ b/docs/version-specific/supported-software/c/CatMAP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CatMAP Catalyst Micro-kinetic Analysis Package for automated creation of micro-kinetic models used in catalyst screening. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``20170927`` | ``-Python-2.7.14`` | ``intel/2017b`` ``20220519`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Catch2.md b/docs/version-specific/supported-software/c/Catch2.md index 3c2b4649e..63aa3045f 100644 --- a/docs/version-specific/supported-software/c/Catch2.md +++ b/docs/version-specific/supported-software/c/Catch2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Catch2 A modern, C++-native, header-only, test framework for unit-tests, TDD and BDD - using C++11, C++14, C++17 and later (or C++03 on the Catch1.x branch) @@ -13,3 +17,6 @@ version | toolchain ``2.13.9`` | ``GCCcore/13.2.0`` ``2.13.9`` | ``system`` ``2.9.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Cbc.md b/docs/version-specific/supported-software/c/Cbc.md index aa83137cf..1a8627362 100644 --- a/docs/version-specific/supported-software/c/Cbc.md +++ b/docs/version-specific/supported-software/c/Cbc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Cbc Cbc (Coin-or branch and cut) is an open-source mixed integer linear programming solver written in C++. It can be used as a callable library or using a stand-alone executable. @@ -11,3 +15,6 @@ version | toolchain ``2.10.5`` | ``foss/2020b`` ``2.10.5`` | ``foss/2021a`` ``2.10.5`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CellBender.md b/docs/version-specific/supported-software/c/CellBender.md index 88cd347a5..0e53ee209 100644 --- a/docs/version-specific/supported-software/c/CellBender.md +++ b/docs/version-specific/supported-software/c/CellBender.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CellBender CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.2.2`` | | ``foss/2022a`` ``0.3.0`` | ``-CUDA-12.1.1`` | ``foss/2023a`` ``0.3.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CellChat.md b/docs/version-specific/supported-software/c/CellChat.md index e959ec8cc..d0216b1a1 100644 --- a/docs/version-specific/supported-software/c/CellChat.md +++ b/docs/version-specific/supported-software/c/CellChat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CellChat " R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data @@ -7,3 +11,6 @@ version | toolchain --------|---------- ``1.5.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CellMix.md b/docs/version-specific/supported-software/c/CellMix.md index 4eb4a1fd0..d9d1d0f8f 100644 --- a/docs/version-specific/supported-software/c/CellMix.md +++ b/docs/version-specific/supported-software/c/CellMix.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CellMix A Comprehensive Toolbox for Gene Expression Deconvolution @@ -7,3 +11,6 @@ A Comprehensive Toolbox for Gene Expression Deconvolution version | versionsuffix | toolchain --------|---------------|---------- ``1.6.2`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CellOracle.md b/docs/version-specific/supported-software/c/CellOracle.md index 15a95837d..93c123491 100644 --- a/docs/version-specific/supported-software/c/CellOracle.md +++ b/docs/version-specific/supported-software/c/CellOracle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CellOracle CellOracle is a Python library for in silico gene perturbation analyses using single-cell omics data and Gene Regulatory Network models. @@ -7,3 +11,6 @@ CellOracle is a Python library for in silico gene perturbation analyses using si version | toolchain --------|---------- ``0.12.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CellRanger-ARC.md b/docs/version-specific/supported-software/c/CellRanger-ARC.md index 640441deb..6e1597508 100644 --- a/docs/version-specific/supported-software/c/CellRanger-ARC.md +++ b/docs/version-specific/supported-software/c/CellRanger-ARC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CellRanger-ARC Cell Ranger ARC is a set of analysis pipelines that process Chromium Single Cell Multiome ATAC + Gene Expression sequencing data to generate a variety of analyses pertaining to gene expression, chromatin accessibility and their linkage. Furthermore, since the ATAC and gene expression measurements are on the very same cell, we are able to perform analyses that link chromatin accessibility and gene expression. @@ -10,3 +14,6 @@ version | toolchain ``2.0.0`` | ``system`` ``2.0.1`` | ``system`` ``2.0.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CellRanger-ATAC.md b/docs/version-specific/supported-software/c/CellRanger-ATAC.md index 5b8baa577..d72c2bae9 100644 --- a/docs/version-specific/supported-software/c/CellRanger-ATAC.md +++ b/docs/version-specific/supported-software/c/CellRanger-ATAC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CellRanger-ATAC Cell Ranger ATAC is a set of analysis pipelines that process Chromium Single Cell ATAC data. @@ -9,3 +13,6 @@ version | toolchain ``1.2.0`` | ``system`` ``2.0.0`` | ``system`` ``2.1.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CellRanger.md b/docs/version-specific/supported-software/c/CellRanger.md index 600c5639d..8e8d8fa29 100644 --- a/docs/version-specific/supported-software/c/CellRanger.md +++ b/docs/version-specific/supported-software/c/CellRanger.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CellRanger Cell Ranger is a set of analysis pipelines that process Chromium single-cell RNA-seq output to align reads, generate gene-cell matrices and perform clustering and gene expression analysis. @@ -21,3 +25,6 @@ version | toolchain ``7.2.0`` | ``system`` ``8.0.0`` | ``system`` ``8.0.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CellRank.md b/docs/version-specific/supported-software/c/CellRank.md index f02a42bda..f9a01d41b 100644 --- a/docs/version-specific/supported-software/c/CellRank.md +++ b/docs/version-specific/supported-software/c/CellRank.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CellRank CellRank is a toolkit to uncover cellular dynamics based on Markov state modeling of single-cell data. It contains two main modules: kernels compute cell-cell transition probabilities and estimators generate hypothesis based on these. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.4.0`` | ``foss/2021a`` ``2.0.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CellTypist.md b/docs/version-specific/supported-software/c/CellTypist.md index fc093a6ef..5b3a35cda 100644 --- a/docs/version-specific/supported-software/c/CellTypist.md +++ b/docs/version-specific/supported-software/c/CellTypist.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CellTypist A tool for semi-automatic cell type annotation @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.0`` | ``foss/2021b`` ``1.6.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Cellpose.md b/docs/version-specific/supported-software/c/Cellpose.md index 41175f6ed..42228682c 100644 --- a/docs/version-specific/supported-software/c/Cellpose.md +++ b/docs/version-specific/supported-software/c/Cellpose.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Cellpose a generalist algorithm for cellular segmentation @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.6.5`` | | ``fosscuda/2020b`` ``2.2.2`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``2.2.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Centrifuge.md b/docs/version-specific/supported-software/c/Centrifuge.md index a27d72b51..4aafef85f 100644 --- a/docs/version-specific/supported-software/c/Centrifuge.md +++ b/docs/version-specific/supported-software/c/Centrifuge.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Centrifuge Classifier for metagenomic sequences @@ -11,3 +15,6 @@ version | toolchain ``1.0.4-beta`` | ``gompi/2020a`` ``1.0.4`` | ``gompi/2020b`` ``1.0.4`` | ``gompi/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Cereal.md b/docs/version-specific/supported-software/c/Cereal.md index 46c921102..e4c75504e 100644 --- a/docs/version-specific/supported-software/c/Cereal.md +++ b/docs/version-specific/supported-software/c/Cereal.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Cereal cereal is a header-only C++11 serialization library. cereal takes arbitrary data types and reversibly turns them into different representations, such as compact binary encodings, XML, or JSON. cereal was designed to be fast, light-weight, and easy to extend - it has no external dependencies and can be easily bundled with other code or used standalone. @@ -9,3 +13,6 @@ version | toolchain ``1.3.0`` | ``system`` ``1.3.2`` | ``GCCcore/12.2.0`` ``1.3.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Cgl.md b/docs/version-specific/supported-software/c/Cgl.md index 2b9323ebe..c50963a9d 100644 --- a/docs/version-specific/supported-software/c/Cgl.md +++ b/docs/version-specific/supported-software/c/Cgl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Cgl The COIN-OR Cut Generation Library (Cgl) is a collection of cut generators that can be used with other COIN-OR packages that make use of cuts, such as, among others, the linear solver Clp or the mixed integer linear programming solvers Cbc or BCP. Cgl uses the abstract class OsiSolverInterface (see Osi) to use or communicate with a solver. It does not directly call a solver. @@ -11,3 +15,6 @@ version | toolchain ``0.60.3`` | ``foss/2021a`` ``0.60.7`` | ``foss/2022b`` ``0.60.8`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/ChIPseeker.md b/docs/version-specific/supported-software/c/ChIPseeker.md index 370634715..decf39e12 100644 --- a/docs/version-specific/supported-software/c/ChIPseeker.md +++ b/docs/version-specific/supported-software/c/ChIPseeker.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ChIPseeker This package implements functions to retrieve the nearest genes around the peak, annotate genomic region of the peak, statstical methods for estimate the significance of overlap among ChIP peak data sets, and incorporate GEO database for user to compare the own dataset with those deposited in database. @@ -7,3 +11,6 @@ This package implements functions to retrieve the nearest genes around the peak, version | versionsuffix | toolchain --------|---------------|---------- ``1.32.1`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CharLS.md b/docs/version-specific/supported-software/c/CharLS.md index 09118fc0a..0c68b722c 100644 --- a/docs/version-specific/supported-software/c/CharLS.md +++ b/docs/version-specific/supported-software/c/CharLS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CharLS CharLS is a C++ implementation of the JPEG-LS standard for lossless and near-lossless image compression and decompression. JPEG-LS is a low-complexity image compression standard that matches JPEG 2000 compression ratios. @@ -15,3 +19,6 @@ version | toolchain ``2.4.1`` | ``GCCcore/11.3.0`` ``2.4.2`` | ``GCCcore/12.2.0`` ``2.4.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CheMPS2.md b/docs/version-specific/supported-software/c/CheMPS2.md index 7c55cb2c0..0961f0b7a 100644 --- a/docs/version-specific/supported-software/c/CheMPS2.md +++ b/docs/version-specific/supported-software/c/CheMPS2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CheMPS2 CheMPS2 is a scientific library which contains a spin-adapted implementation of the density matrix renormalization group (DMRG) for ab initio quantum chemistry. @@ -20,3 +24,6 @@ version | toolchain ``1.8.9`` | ``intel/2018b`` ``1.8.9`` | ``intel/2019a`` ``1.8.9`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Check.md b/docs/version-specific/supported-software/c/Check.md index 3fab45c20..fde808781 100644 --- a/docs/version-specific/supported-software/c/Check.md +++ b/docs/version-specific/supported-software/c/Check.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Check Check is a unit testing framework for C. It features a simple interface for defining unit tests, putting little in the way of the developer. Tests are run in a separate address space, so both assertion failures and code errors that cause segmentation faults or other signals can be caught. Test results are reportable in the following: Subunit, TAP, XML, and a generic logging format. @@ -15,3 +19,6 @@ version | toolchain ``0.15.2`` | ``GCCcore/12.3.0`` ``0.15.2`` | ``GCCcore/13.2.0`` ``0.15.2`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CheckM-Database.md b/docs/version-specific/supported-software/c/CheckM-Database.md index db61507b7..c699dcd1d 100644 --- a/docs/version-specific/supported-software/c/CheckM-Database.md +++ b/docs/version-specific/supported-software/c/CheckM-Database.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CheckM-Database CheckM provides a set of tools for assessing the quality of genomes recovered from isolates, single cells, or metagenomes. This is the corresponding database. @@ -7,3 +11,6 @@ CheckM provides a set of tools for assessing the quality of genomes recovered fr version | toolchain --------|---------- ``2015_01_16`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CheckM.md b/docs/version-specific/supported-software/c/CheckM.md index 6654a77b3..cdb1d645e 100644 --- a/docs/version-specific/supported-software/c/CheckM.md +++ b/docs/version-specific/supported-software/c/CheckM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CheckM CheckM provides a set of tools for assessing the quality of genomes recovered from isolates, single cells, or metagenomes. @@ -19,3 +23,6 @@ version | versionsuffix | toolchain ``1.1.3`` | | ``foss/2021b`` ``1.1.3`` | ``-Python-3.8.2`` | ``intel/2020a`` ``1.2.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CheckM2.md b/docs/version-specific/supported-software/c/CheckM2.md index 8b588fc9f..ca6faf0ac 100644 --- a/docs/version-specific/supported-software/c/CheckM2.md +++ b/docs/version-specific/supported-software/c/CheckM2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CheckM2 Assessing the quality of metagenome-derived genome bins using machine learning @@ -7,3 +11,6 @@ Assessing the quality of metagenome-derived genome bins using machine learning version | toolchain --------|---------- ``1.0.2`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Cheetah.md b/docs/version-specific/supported-software/c/Cheetah.md index cc39dc3ad..deb3802b5 100644 --- a/docs/version-specific/supported-software/c/Cheetah.md +++ b/docs/version-specific/supported-software/c/Cheetah.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Cheetah Cheetah is an open source template engine and code generation tool. @@ -7,3 +11,6 @@ Cheetah is an open source template engine and code generation tool. version | versionsuffix | toolchain --------|---------------|---------- ``2.4.4`` | ``-Python-2.7.15`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Chemaxon-Marvin.md b/docs/version-specific/supported-software/c/Chemaxon-Marvin.md index f05d3515a..8e45e36e2 100644 --- a/docs/version-specific/supported-software/c/Chemaxon-Marvin.md +++ b/docs/version-specific/supported-software/c/Chemaxon-Marvin.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Chemaxon-Marvin Marvin suite is a chemically intelligent desktop toolkit built to help you draw, edit, publish, render, import and export your chemical structures and as well as allowing you to convert between various chemical and graphical file formats. It is free for individual, academic and non-commercial use. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``21.14`` | ``system`` ``23.9`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/ChimPipe.md b/docs/version-specific/supported-software/c/ChimPipe.md index f99bf1eb8..988b7f556 100644 --- a/docs/version-specific/supported-software/c/ChimPipe.md +++ b/docs/version-specific/supported-software/c/ChimPipe.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ChimPipe ChimPipe is a computational method for the detection of novel transcription-induced chimeric transcripts and fusion genes from Illumina Paired-End RNA-seq data. It combines junction spanning and paired-end read information to accurately detect chimeric splice junctions at base-pair resolution. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.9.5`` | ``-Python-2.7.12`` | ``foss/2016b`` ``0.9.5`` | | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Chimera.md b/docs/version-specific/supported-software/c/Chimera.md index f92a8aa5d..41501a4a1 100644 --- a/docs/version-specific/supported-software/c/Chimera.md +++ b/docs/version-specific/supported-software/c/Chimera.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Chimera UCSF Chimera is a highly extensible program for interactive visualization and analysis of molecular structures and related data, including density maps, supramolecular assemblies, sequence alignments, docking results, trajectories, and conformational ensembles. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.10`` | ``-linux_x86_64`` | ``system`` ``1.16`` | ``-linux_x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Chromaprint.md b/docs/version-specific/supported-software/c/Chromaprint.md index fdc9a1b96..99d1537db 100644 --- a/docs/version-specific/supported-software/c/Chromaprint.md +++ b/docs/version-specific/supported-software/c/Chromaprint.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Chromaprint Chromaprint is the core component of the AcoustID project. It's a client-side library that implements a custom algorithm for extracting fingerprints from any audio source. @@ -7,3 +11,6 @@ Chromaprint is the core component of the AcoustID project. It's a client-side li version | toolchain --------|---------- ``1.4.3`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Circlator.md b/docs/version-specific/supported-software/c/Circlator.md index 0d4159137..7e19f11a1 100644 --- a/docs/version-specific/supported-software/c/Circlator.md +++ b/docs/version-specific/supported-software/c/Circlator.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Circlator A tool to circularize genome assemblies.s @@ -7,3 +11,6 @@ A tool to circularize genome assemblies.s version | toolchain --------|---------- ``1.5.5`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Circos.md b/docs/version-specific/supported-software/c/Circos.md index ca22e8024..76caeeab8 100644 --- a/docs/version-specific/supported-software/c/Circos.md +++ b/docs/version-specific/supported-software/c/Circos.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Circos Circos is a software package for visualizing data and information. It visualizes data in a circular layout - this makes Circos ideal for exploring relationships between objects or positions. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.69-6`` | ``-Perl-5.28.0`` | ``GCCcore/7.3.0`` ``0.69-9`` | | ``GCCcore/11.3.0`` ``0.69-9`` | | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Circuitscape.md b/docs/version-specific/supported-software/c/Circuitscape.md index b40a2303a..e0547b5c1 100644 --- a/docs/version-specific/supported-software/c/Circuitscape.md +++ b/docs/version-specific/supported-software/c/Circuitscape.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Circuitscape Algorithms from circuit theory to predict connectivity in heterogeneous landscapes @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``5.12.3`` | ``-Julia-1.7.2`` | ``system`` ``5.12.3`` | ``-Julia-1.9.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Clair3.md b/docs/version-specific/supported-software/c/Clair3.md index 0107810a3..64d8a6cdc 100644 --- a/docs/version-specific/supported-software/c/Clair3.md +++ b/docs/version-specific/supported-software/c/Clair3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Clair3 Clair3 is a germline small variant caller for long-reads. Clair3 makes the best of two major method categories: pileup calling handles most variant candidates with speed, and full-alignment tackles complicated candidates to maximize precision and recall. Clair3 runs fast and has superior performance, especially at lower coverage. Clair3 is simple and modular for easy deployment and integration. @@ -7,3 +11,6 @@ Clair3 is a germline small variant caller for long-reads. Clair3 makes the best version | toolchain --------|---------- ``1.0.4`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Clang-AOMP.md b/docs/version-specific/supported-software/c/Clang-AOMP.md index 493898d36..2f7504d86 100644 --- a/docs/version-specific/supported-software/c/Clang-AOMP.md +++ b/docs/version-specific/supported-software/c/Clang-AOMP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Clang-AOMP AOMP is an open source Clang/LLVM based compiler with added support for the OpenMP® API on Radeon™ GPUs. @@ -7,3 +11,6 @@ AOMP is an open source Clang/LLVM based compiler with added support for the Open version | toolchain --------|---------- ``4.5.0`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Clang-Python-bindings.md b/docs/version-specific/supported-software/c/Clang-Python-bindings.md index 93358948b..d66446c57 100644 --- a/docs/version-specific/supported-software/c/Clang-Python-bindings.md +++ b/docs/version-specific/supported-software/c/Clang-Python-bindings.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Clang-Python-bindings Python bindings for libclang @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``13.0.1`` | | ``GCCcore/11.3.0`` ``16.0.6`` | | ``GCCcore/12.3.0`` ``8.0.0`` | ``-Python-2.7.15`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Clang.md b/docs/version-specific/supported-software/c/Clang.md index bc5909d5f..a0b4823fe 100644 --- a/docs/version-specific/supported-software/c/Clang.md +++ b/docs/version-specific/supported-software/c/Clang.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Clang C, C++, Objective-C compiler, based on LLVM. Does not include C++ standard library -- use libstdc++ from GCC. @@ -49,3 +53,6 @@ version | versionsuffix | toolchain ``9.0.1`` | ``-CUDA-10.1.243`` | ``GCC/8.3.0`` ``9.0.1`` | | ``GCCcore/8.3.0`` ``9.0.1`` | | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Clarabel.rs.md b/docs/version-specific/supported-software/c/Clarabel.rs.md index 4ed0035aa..90ffe3043 100644 --- a/docs/version-specific/supported-software/c/Clarabel.rs.md +++ b/docs/version-specific/supported-software/c/Clarabel.rs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Clarabel.rs Interior-point solver for convex conic optimisation problems in Rust. @@ -7,3 +11,6 @@ Interior-point solver for convex conic optimisation problems in Rust. version | toolchain --------|---------- ``0.7.1`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CliMetLab.md b/docs/version-specific/supported-software/c/CliMetLab.md index b6597de75..ab9841f74 100644 --- a/docs/version-specific/supported-software/c/CliMetLab.md +++ b/docs/version-specific/supported-software/c/CliMetLab.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CliMetLab CliMetLab is a Python package aiming at simplifying access to climate and meteorological datasets, allowing users to focus on science instead of technical issues such as data access and data formats. It is mostly intended to be used in Jupyter notebooks, and be interoperable with all popular data analytic packages, such as Numpy, Pandas, Xarray, SciPy, Matplotlib, etc. as well as machine learning frameworks, such as Tensorflow, Keras or PyTorch. @@ -7,3 +11,6 @@ CliMetLab is a Python package aiming at simplifying access to climate and meteor version | toolchain --------|---------- ``0.12.6`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/ClonalFrameML.md b/docs/version-specific/supported-software/c/ClonalFrameML.md index 8ccde425f..0def3e70b 100644 --- a/docs/version-specific/supported-software/c/ClonalFrameML.md +++ b/docs/version-specific/supported-software/c/ClonalFrameML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ClonalFrameML Efficient Inference of Recombination in Whole Bacterial Genomes @@ -7,3 +11,6 @@ Efficient Inference of Recombination in Whole Bacterial Genomes version | toolchain --------|---------- ``1.11`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CloudCompare.md b/docs/version-specific/supported-software/c/CloudCompare.md index 507f370b9..bc67b1ba5 100644 --- a/docs/version-specific/supported-software/c/CloudCompare.md +++ b/docs/version-specific/supported-software/c/CloudCompare.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CloudCompare 3D point cloud and mesh processing software @@ -7,3 +11,6 @@ version | toolchain --------|---------- ``2.12.4`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Clp.md b/docs/version-specific/supported-software/c/Clp.md index 4de40e950..3029a3147 100644 --- a/docs/version-specific/supported-software/c/Clp.md +++ b/docs/version-specific/supported-software/c/Clp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Clp Clp (Coin-or linear programming) is an open-source linear programming solver. It is primarily meant to be used as a callable library, but a basic, stand-alone executable version is also available. @@ -12,3 +16,6 @@ version | toolchain ``1.17.7`` | ``foss/2021b`` ``1.17.8`` | ``foss/2022b`` ``1.17.9`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Clustal-Omega.md b/docs/version-specific/supported-software/c/Clustal-Omega.md index c31e76a1a..3faefa4b6 100644 --- a/docs/version-specific/supported-software/c/Clustal-Omega.md +++ b/docs/version-specific/supported-software/c/Clustal-Omega.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Clustal-Omega Clustal Omega is a multiple sequence alignment program for proteins. It produces biologically meaningful multiple sequence alignments of divergent sequences. Evolutionary relationships can be seen via viewing Cladograms or Phylograms @@ -15,3 +19,6 @@ version | toolchain ``1.2.4`` | ``intel/2018a`` ``1.2.4`` | ``intel/2018b`` ``1.2.4`` | ``intel-compilers/2021.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/ClustalW2.md b/docs/version-specific/supported-software/c/ClustalW2.md index 126d6a427..3c6c1f11b 100644 --- a/docs/version-specific/supported-software/c/ClustalW2.md +++ b/docs/version-specific/supported-software/c/ClustalW2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ClustalW2 ClustalW2 is a general purpose multiple sequence alignment program for DNA or proteins. @@ -16,3 +20,6 @@ version | toolchain ``2.1`` | ``intel/2017b`` ``2.1`` | ``intel/2018b`` ``2.1`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Cluster-Buster.md b/docs/version-specific/supported-software/c/Cluster-Buster.md index 088e69531..a27f8b617 100644 --- a/docs/version-specific/supported-software/c/Cluster-Buster.md +++ b/docs/version-specific/supported-software/c/Cluster-Buster.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Cluster-Buster Cluster-Buster: Finding dense clusters of motifs in DNA sequences @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20160106`` | ``intel/2016a`` ``20200507`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/ClusterShell.md b/docs/version-specific/supported-software/c/ClusterShell.md index 3f8e7e5ea..de8d8fb71 100644 --- a/docs/version-specific/supported-software/c/ClusterShell.md +++ b/docs/version-specific/supported-software/c/ClusterShell.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ClusterShell ClusterShell is an event-driven open source Python library, designed to run local or distant commands in parallel on server farms or on large Linux clusters. @@ -7,3 +11,6 @@ ClusterShell is an event-driven open source Python library, designed to run loca version | toolchain --------|---------- ``1.7.3`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CmdStanR.md b/docs/version-specific/supported-software/c/CmdStanR.md index 337d169b9..e4a6ca293 100644 --- a/docs/version-specific/supported-software/c/CmdStanR.md +++ b/docs/version-specific/supported-software/c/CmdStanR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CmdStanR CmdStanR is a lightweight interface to Stan for R users @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.5.0`` | ``-R-4.1.2`` | ``foss/2021b`` ``0.5.2`` | ``-R-4.2.1`` | ``foss/2022a`` ``0.7.1`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Co-phylog.md b/docs/version-specific/supported-software/c/Co-phylog.md index 4e2f95bb8..b9445e6e6 100644 --- a/docs/version-specific/supported-software/c/Co-phylog.md +++ b/docs/version-specific/supported-software/c/Co-phylog.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Co-phylog Co-phylog: an assembly-free phylogenomic approach for closely related organisms H Yi, L Jin Nucleic acids research 41 (7), e75-e75 @@ -7,3 +11,6 @@ Co-phylog: an assembly-free phylogenomic approach for closely related organisms version | toolchain --------|---------- ``20201012`` | ``GCC/7.3.0-2.30`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CoCoALib.md b/docs/version-specific/supported-software/c/CoCoALib.md index 9e40fae7e..352a346fc 100644 --- a/docs/version-specific/supported-software/c/CoCoALib.md +++ b/docs/version-specific/supported-software/c/CoCoALib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CoCoALib CoCoALib is a free GPL3 C++ library for doing Computations in Commutative Algebra. @@ -10,3 +14,6 @@ version | toolchain ``0.99700`` | ``GCC/8.3.0`` ``0.99818`` | ``GCC/11.3.0`` ``0.99850`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CoSymLib.md b/docs/version-specific/supported-software/c/CoSymLib.md index fe1b1a572..5cd759b43 100644 --- a/docs/version-specific/supported-software/c/CoSymLib.md +++ b/docs/version-specific/supported-software/c/CoSymLib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CoSymLib Cosymlib is a python library for computing continuous symmetry & shape measures (CSMs & CShMs). Although its main aim is to provide simple and ready-to-use tools for the analysis of the symmetry & shape of molecules, many of the procedures contained in cosymlib can be easily applied to any finite geometrical object defined by a set of vertices or a by mass distribution function. @@ -7,3 +11,6 @@ Cosymlib is a python library for computing continuous symmetry & shape measures version | toolchain --------|---------- ``0.10.9`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CodAn.md b/docs/version-specific/supported-software/c/CodAn.md index e529e0b4a..db89ca7a0 100644 --- a/docs/version-specific/supported-software/c/CodAn.md +++ b/docs/version-specific/supported-software/c/CodAn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CodAn CodAn (Coding sequence Annotator) is a computational tool designed to characterize the CDS and UTR regions on transcripts from any Eukaryote species. @@ -7,3 +11,6 @@ CodAn (Coding sequence Annotator) is a computational tool designed to characteri version | toolchain --------|---------- ``1.2`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CodingQuarry.md b/docs/version-specific/supported-software/c/CodingQuarry.md index 5c8a4eba8..a57fb5616 100644 --- a/docs/version-specific/supported-software/c/CodingQuarry.md +++ b/docs/version-specific/supported-software/c/CodingQuarry.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CodingQuarry Highly accurate hidden Markov model gene prediction in fungal genomes using RNA-seq transcripts @@ -7,3 +11,6 @@ Highly accurate hidden Markov model gene prediction in fungal genomes using RNA- version | toolchain --------|---------- ``2.0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Cogent.md b/docs/version-specific/supported-software/c/Cogent.md index c205f5613..f92a64497 100644 --- a/docs/version-specific/supported-software/c/Cogent.md +++ b/docs/version-specific/supported-software/c/Cogent.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Cogent Cogent is a tool for reconstructing the coding genome using high-quality full-length transcriptome sequences. It is designed to be used on Iso-Seq data and in cases where there is no reference genome or the ref genome is highly incomplete. @@ -7,3 +11,6 @@ Cogent is a tool for reconstructing the coding genome using high-quality full-le version | toolchain --------|---------- ``8.0.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Coin.md b/docs/version-specific/supported-software/c/Coin.md index e2a43c602..9dbce7e39 100644 --- a/docs/version-specific/supported-software/c/Coin.md +++ b/docs/version-specific/supported-software/c/Coin.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Coin Coin is an OpenGL-based, 3D graphics library that has its roots in the Open Inventor 2.1 API, which Coin still is compatible with. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``4.0.0`` | ``GCC/10.3.0`` ``4.0.0`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CoinUtils.md b/docs/version-specific/supported-software/c/CoinUtils.md index 135a68747..c04780fa1 100644 --- a/docs/version-specific/supported-software/c/CoinUtils.md +++ b/docs/version-specific/supported-software/c/CoinUtils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CoinUtils CoinUtils (Coin-OR Utilities) is an open-source collection of classes and functions that are generally useful to more than one COIN-OR project. @@ -13,3 +17,6 @@ version | toolchain ``2.11.4`` | ``GCCcore/10.2.0`` ``2.11.6`` | ``GCC/11.2.0`` ``2.11.9`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/ColabFold.md b/docs/version-specific/supported-software/c/ColabFold.md index ea5ed43f6..7df2aef7d 100644 --- a/docs/version-specific/supported-software/c/ColabFold.md +++ b/docs/version-specific/supported-software/c/ColabFold.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ColabFold Making protein folding accessible to all. Predict proteins structures both in google colab and on your machine. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.5.2`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``1.5.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Commet.md b/docs/version-specific/supported-software/c/Commet.md index da43227fe..6902a9253 100644 --- a/docs/version-specific/supported-software/c/Commet.md +++ b/docs/version-specific/supported-software/c/Commet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Commet COMMET ("COmpare Multiple METagenomes") provides a global similarity overview between all datasets of a large metagenomic project. @@ -7,3 +11,6 @@ COMMET ("COmpare Multiple METagenomes") provides a global similarity overview be version | versionsuffix | toolchain --------|---------------|---------- ``20150415`` | ``-Python-2.7.11`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CompareM.md b/docs/version-specific/supported-software/c/CompareM.md index f68b1afa5..75f046a77 100644 --- a/docs/version-specific/supported-software/c/CompareM.md +++ b/docs/version-specific/supported-software/c/CompareM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CompareM A toolbox for comparative genomics. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.0.23`` | ``-Python-2.7.15`` | ``foss/2018b`` ``0.1.2`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Compass.md b/docs/version-specific/supported-software/c/Compass.md index 18f02d5b6..6a43be889 100644 --- a/docs/version-specific/supported-software/c/Compass.md +++ b/docs/version-specific/supported-software/c/Compass.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Compass In-Silico Modeling of Metabolic Heterogeneity using Single-Cell Transcriptomes. @@ -7,3 +11,6 @@ In-Silico Modeling of Metabolic Heterogeneity using Single-Cell Transcriptomes. version | toolchain --------|---------- ``2024.04`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Compress-Raw-Zlib.md b/docs/version-specific/supported-software/c/Compress-Raw-Zlib.md index 748433a80..16c4d9102 100644 --- a/docs/version-specific/supported-software/c/Compress-Raw-Zlib.md +++ b/docs/version-specific/supported-software/c/Compress-Raw-Zlib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Compress-Raw-Zlib Low-Level Interface to zlib or zlib-ng compression library @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.202`` | ``GCCcore/11.3.0`` ``2.202`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Con3F.md b/docs/version-specific/supported-software/c/Con3F.md index 703f11327..a3dc6bcf4 100644 --- a/docs/version-specific/supported-software/c/Con3F.md +++ b/docs/version-specific/supported-software/c/Con3F.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Con3F Con3F is a Python package to read, manipulate and convert force field files @@ -7,3 +11,6 @@ Con3F is a Python package to read, manipulate and convert force field files version | versionsuffix | toolchain --------|---------------|---------- ``1.0-20190329`` | ``-Python-3.7.2`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Concorde.md b/docs/version-specific/supported-software/c/Concorde.md index 5e522a4e3..195f1e356 100644 --- a/docs/version-specific/supported-software/c/Concorde.md +++ b/docs/version-specific/supported-software/c/Concorde.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Concorde Concorde is a computer code for the symmetric traveling salesman problem (TSP) and some related network optimization problems @@ -7,3 +11,6 @@ Concorde is a computer code for the symmetric traveling salesman problem (TSP) version | toolchain --------|---------- ``20031219`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/ConcurrentVersionsSystem.md b/docs/version-specific/supported-software/c/ConcurrentVersionsSystem.md index 8866b5a92..cde1c2b23 100644 --- a/docs/version-specific/supported-software/c/ConcurrentVersionsSystem.md +++ b/docs/version-specific/supported-software/c/ConcurrentVersionsSystem.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ConcurrentVersionsSystem CVS is a version control system, an important component of Source Configuration Management (SCM). @@ -10,3 +14,6 @@ version | toolchain ``1.11.23`` | ``GCCcore/11.2.0`` ``1.11.23`` | ``GCCcore/4.9.3`` ``1.11.23`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/ConnectomeWorkbench.md b/docs/version-specific/supported-software/c/ConnectomeWorkbench.md index 2d7a6907a..ad51470e6 100644 --- a/docs/version-specific/supported-software/c/ConnectomeWorkbench.md +++ b/docs/version-specific/supported-software/c/ConnectomeWorkbench.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ConnectomeWorkbench Connectome Workbench is an open-source visualization and discovery tool used to explore data generated by the Human Connectome Project. The distribution includes wb_view, a GUI-based visualization platform, and wb_command, a command-line program for performing a variety of algorithmic tasks using volume, surface, and grayordinate data. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``1.3.2`` | | ``intel/2017b`` ``1.4.2`` | ``-rh_linux64`` | ``system`` ``1.5.0`` | | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Control-FREEC.md b/docs/version-specific/supported-software/c/Control-FREEC.md index 3096c82fb..acecd0f6c 100644 --- a/docs/version-specific/supported-software/c/Control-FREEC.md +++ b/docs/version-specific/supported-software/c/Control-FREEC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Control-FREEC Copy number and genotype annotation from whole genome and whole exome sequencing data. @@ -9,3 +13,6 @@ version | toolchain ``11.5`` | ``GCC/7.3.0-2.30`` ``11.5`` | ``GCC/8.2.0-2.31.1`` ``11.6`` | ``GCC/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CoordgenLibs.md b/docs/version-specific/supported-software/c/CoordgenLibs.md index 7f26819d1..43b334390 100644 --- a/docs/version-specific/supported-software/c/CoordgenLibs.md +++ b/docs/version-specific/supported-software/c/CoordgenLibs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CoordgenLibs Schrodinger-developed 2D Coordinate Generation @@ -13,3 +17,6 @@ version | toolchain ``3.0.1`` | ``gompi/2022a`` ``3.0.1`` | ``iimpi/2020a`` ``3.0.2`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Coot.md b/docs/version-specific/supported-software/c/Coot.md index e7a12ab68..ca488938f 100644 --- a/docs/version-specific/supported-software/c/Coot.md +++ b/docs/version-specific/supported-software/c/Coot.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Coot Coot is for macromolecular model building, model completion and validation, particularly suitable for protein modelling using X-ray data. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.8.1`` | ``-binary-Linux-x86_64-rhel-6-python-gtk2`` | ``system`` ``0.9.8.92`` | ``-binary-Linux-x86_64-scientific-linux-7.6-python-gtk2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CopyKAT.md b/docs/version-specific/supported-software/c/CopyKAT.md index 432fdd263..0a24b3f9d 100644 --- a/docs/version-specific/supported-software/c/CopyKAT.md +++ b/docs/version-specific/supported-software/c/CopyKAT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CopyKAT CopyKAT: Inference of genomic copy number and subclonal structure of human tumors from high-throughput single cell RNAseq data @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.1.0`` | ``-R-4.2.1`` | ``foss/2022a`` ``1.1.0`` | ``-R-4.2.2`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Coreutils.md b/docs/version-specific/supported-software/c/Coreutils.md index ef773bf5c..ade19ae24 100644 --- a/docs/version-specific/supported-software/c/Coreutils.md +++ b/docs/version-specific/supported-software/c/Coreutils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Coreutils The GNU Core Utilities are the basic file, shell and text manipulation utilities of the GNU operating system. These are the core utilities which are expected to exist on every operating system. @@ -14,3 +18,6 @@ version | toolchain ``9.0`` | ``GCCcore/11.2.0`` ``9.1`` | ``GCCcore/11.3.0`` ``9.1`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CppHeaderParser.md b/docs/version-specific/supported-software/c/CppHeaderParser.md index 68b5022af..94b2842d0 100644 --- a/docs/version-specific/supported-software/c/CppHeaderParser.md +++ b/docs/version-specific/supported-software/c/CppHeaderParser.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CppHeaderParser CppHeaderParser is a pure python module that will parse C++ header files and generate a data structure representing the class. @@ -7,3 +11,6 @@ CppHeaderParser is a pure python module that will parse C++ header files and gen version | toolchain --------|---------- ``2.7.4`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CppUnit.md b/docs/version-specific/supported-software/c/CppUnit.md index 4a15214ac..b59db7a75 100644 --- a/docs/version-specific/supported-software/c/CppUnit.md +++ b/docs/version-specific/supported-software/c/CppUnit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CppUnit CppUnit is the C++ port of the famous JUnit framework for unit testing. @@ -16,3 +20,6 @@ version | toolchain ``1.15.1`` | ``GCCcore/12.3.0`` ``1.15.1`` | ``GCCcore/8.3.0`` ``1.15.1`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CrayCCE.md b/docs/version-specific/supported-software/c/CrayCCE.md index a206d2777..e130a7548 100644 --- a/docs/version-specific/supported-software/c/CrayCCE.md +++ b/docs/version-specific/supported-software/c/CrayCCE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CrayCCE Toolchain using Cray compiler wrapper, using PrgEnv-cray (PE release: June 2019). @@ -7,3 +11,6 @@ Toolchain using Cray compiler wrapper, using PrgEnv-cray (PE release: June 2019) version | toolchain --------|---------- ``19.06`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CrayGNU.md b/docs/version-specific/supported-software/c/CrayGNU.md index 23307dc2b..e13cbac40 100644 --- a/docs/version-specific/supported-software/c/CrayGNU.md +++ b/docs/version-specific/supported-software/c/CrayGNU.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CrayGNU Toolchain using Cray compiler wrapper, using PrgEnv-gnu module (PE release: June 2019). @@ -7,3 +11,6 @@ Toolchain using Cray compiler wrapper, using PrgEnv-gnu module (PE release: June version | toolchain --------|---------- ``19.06`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CrayIntel.md b/docs/version-specific/supported-software/c/CrayIntel.md index 6c51d88a4..fe2b12f3b 100644 --- a/docs/version-specific/supported-software/c/CrayIntel.md +++ b/docs/version-specific/supported-software/c/CrayIntel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CrayIntel Toolchain using Cray compiler wrapper, using PrgEnv-intel (PE release: June 2019). @@ -7,3 +11,6 @@ Toolchain using Cray compiler wrapper, using PrgEnv-intel (PE release: June 2019 version | toolchain --------|---------- ``19.06`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CrayPGI.md b/docs/version-specific/supported-software/c/CrayPGI.md index 6f544bee9..295858154 100644 --- a/docs/version-specific/supported-software/c/CrayPGI.md +++ b/docs/version-specific/supported-software/c/CrayPGI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CrayPGI Toolchain using Cray compiler wrapper, PrgEnv-pgi compiler (PE release: June 2019). @@ -7,3 +11,6 @@ Toolchain using Cray compiler wrapper, PrgEnv-pgi compiler (PE release: June 201 version | toolchain --------|---------- ``19.06`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CrossMap.md b/docs/version-specific/supported-software/c/CrossMap.md index 1f1a155fd..bb6fd7b36 100644 --- a/docs/version-specific/supported-software/c/CrossMap.md +++ b/docs/version-specific/supported-software/c/CrossMap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CrossMap CrossMap is a program for genome coordinates conversion between different assemblies (such as hg18 (NCBI36) <=> hg19 (GRCh37)). It supports commonly used file formats including BAM, CRAM, SAM, Wiggle, BigWig, BED, GFF, GTF and VCF. @@ -7,3 +11,6 @@ CrossMap is a program for genome coordinates conversion between different assem version | versionsuffix | toolchain --------|---------------|---------- ``0.3.9`` | ``-Python-3.7.2`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CrossTalkZ.md b/docs/version-specific/supported-software/c/CrossTalkZ.md index b18f62652..a56c34689 100644 --- a/docs/version-specific/supported-software/c/CrossTalkZ.md +++ b/docs/version-specific/supported-software/c/CrossTalkZ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CrossTalkZ CrossTalkZ is a statistical method and software to assess the significance of crosstalk enrichment between pairs of gene or protein groups in large biological networks. @@ -7,3 +11,6 @@ CrossTalkZ is a statistical method and software to assess the significance of cr version | toolchain --------|---------- ``1.4`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Crumble.md b/docs/version-specific/supported-software/c/Crumble.md index f55936106..566153379 100644 --- a/docs/version-specific/supported-software/c/Crumble.md +++ b/docs/version-specific/supported-software/c/Crumble.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Crumble Exploration of controlled loss of quality values for compressing CRAM files @@ -7,3 +11,6 @@ Exploration of controlled loss of quality values for compressing CRAM files version | toolchain --------|---------- ``0.8.3`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CryptoMiniSat.md b/docs/version-specific/supported-software/c/CryptoMiniSat.md index 05dcc052c..53c37c014 100644 --- a/docs/version-specific/supported-software/c/CryptoMiniSat.md +++ b/docs/version-specific/supported-software/c/CryptoMiniSat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CryptoMiniSat CryptoMiniSat is an advanced SAT solver @@ -7,3 +11,6 @@ CryptoMiniSat is an advanced SAT solver version | versionsuffix | toolchain --------|---------------|---------- ``5.0.1`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CrystFEL.md b/docs/version-specific/supported-software/c/CrystFEL.md index 38bc81b50..640482eb3 100644 --- a/docs/version-specific/supported-software/c/CrystFEL.md +++ b/docs/version-specific/supported-software/c/CrystFEL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CrystFEL CrystFEL is a suite of programs for processing diffraction data acquired "serially" in a "snapshot" manner, such as when using the technique of Serial Femtosecond Crystallography (SFX) with a free-electron laser source. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.8.0`` | ``foss/2019a`` ``0.8.0`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CuCLARK.md b/docs/version-specific/supported-software/c/CuCLARK.md index 2a6338fef..75faa2cf0 100644 --- a/docs/version-specific/supported-software/c/CuCLARK.md +++ b/docs/version-specific/supported-software/c/CuCLARK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CuCLARK Metagenomic classifier for CUDA-enabled GPUs @@ -7,3 +11,6 @@ Metagenomic classifier for CUDA-enabled GPUs version | toolchain --------|---------- ``1.1`` | ``fosscuda/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CuPy.md b/docs/version-specific/supported-software/c/CuPy.md index af4f96d00..7662a7e5d 100644 --- a/docs/version-specific/supported-software/c/CuPy.md +++ b/docs/version-specific/supported-software/c/CuPy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CuPy CuPy is an open-source array library accelerated with NVIDIA CUDA. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``13.0.0`` | ``-CUDA-12.1.1`` | ``foss/2023a`` ``8.2.0`` | ``-Python-3.7.4`` | ``fosscuda/2019b`` ``8.5.0`` | | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Cube.md b/docs/version-specific/supported-software/c/Cube.md index eab9da5d0..29907a377 100644 --- a/docs/version-specific/supported-software/c/Cube.md +++ b/docs/version-specific/supported-software/c/Cube.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Cube Cube, which is used as performance report explorer for Scalasca and Score-P, is a generic tool for displaying a multi-dimensional performance space consisting of the dimensions (i) performance metric, (ii) call path, and (iii) system resource. Each dimension can be represented as a tree, where non-leaf nodes of the tree can be collapsed or expanded to achieve the desired level of granularity. @@ -7,3 +11,6 @@ Cube, which is used as performance report explorer for Scalasca and Score-P, is version | toolchain --------|---------- ``4.3.4`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CubeGUI.md b/docs/version-specific/supported-software/c/CubeGUI.md index cb3083a02..f8b15bf92 100644 --- a/docs/version-specific/supported-software/c/CubeGUI.md +++ b/docs/version-specific/supported-software/c/CubeGUI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CubeGUI Cube, which is used as performance report explorer for Scalasca and Score-P, is a generic tool for displaying a multi-dimensional performance space consisting of the dimensions (i) performance metric, (ii) call path, and (iii) system resource. Each dimension can be represented as a tree, where non-leaf nodes of the tree can be collapsed or expanded to achieve the desired level of granularity. This module provides the Cube graphical report explorer. @@ -11,3 +15,6 @@ version | toolchain ``4.6`` | ``GCCcore/10.2.0`` ``4.6`` | ``GCCcore/10.3.0`` ``4.8`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CubeLib.md b/docs/version-specific/supported-software/c/CubeLib.md index f2ff80f1b..8ade9a582 100644 --- a/docs/version-specific/supported-software/c/CubeLib.md +++ b/docs/version-specific/supported-software/c/CubeLib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CubeLib Cube, which is used as performance report explorer for Scalasca and Score-P, is a generic tool for displaying a multi-dimensional performance space consisting of the dimensions (i) performance metric, (ii) call path, and (iii) system resource. Each dimension can be represented as a tree, where non-leaf nodes of the tree can be collapsed or expanded to achieve the desired level of granularity. This module provides the Cube general purpose C++ library component and command-line tools. @@ -17,3 +21,6 @@ version | toolchain ``4.8.1`` | ``GCCcore/12.3.0`` ``4.8.2`` | ``GCCcore/12.2.0`` ``4.8.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/CubeWriter.md b/docs/version-specific/supported-software/c/CubeWriter.md index 73daa36c6..5f704e657 100644 --- a/docs/version-specific/supported-software/c/CubeWriter.md +++ b/docs/version-specific/supported-software/c/CubeWriter.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # CubeWriter Cube, which is used as performance report explorer for Scalasca and Score-P, is a generic tool for displaying a multi-dimensional performance space consisting of the dimensions (i) performance metric, (ii) call path, and (iii) system resource. Each dimension can be represented as a tree, where non-leaf nodes of the tree can be collapsed or expanded to achieve the desired level of granularity. This module provides the Cube high-performance C writer library component. @@ -18,3 +22,6 @@ version | toolchain ``4.8.1`` | ``GCCcore/12.3.0`` ``4.8.2`` | ``GCCcore/12.2.0`` ``4.8.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Cufflinks.md b/docs/version-specific/supported-software/c/Cufflinks.md index f3221b29b..2da76e428 100644 --- a/docs/version-specific/supported-software/c/Cufflinks.md +++ b/docs/version-specific/supported-software/c/Cufflinks.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Cufflinks Transcript assembly, differential expression, and differential regulation for RNA-Seq @@ -15,3 +19,6 @@ version | toolchain ``20190706`` | ``GCC/10.2.0`` ``20190706`` | ``GCC/11.2.0`` ``20190706`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Cython.md b/docs/version-specific/supported-software/c/Cython.md index c103fcb1f..9c983d308 100644 --- a/docs/version-specific/supported-software/c/Cython.md +++ b/docs/version-specific/supported-software/c/Cython.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Cython The Cython language makes writing C extensions for the Python language as easy as Python itself. Cython is a source code translator based on the well-known Pyrex, but supports more cutting edge functionality and optimizations. @@ -23,3 +27,6 @@ version | versionsuffix | toolchain ``3.0.8`` | | ``GCCcore/12.2.0`` ``3.0.8`` | | ``GCCcore/12.3.0`` ``3.0a5`` | | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/Cytoscape.md b/docs/version-specific/supported-software/c/Cytoscape.md index ad487e716..9a5af8648 100644 --- a/docs/version-specific/supported-software/c/Cytoscape.md +++ b/docs/version-specific/supported-software/c/Cytoscape.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Cytoscape Cytoscape is an open source software platform for visualizing complex networks and integrating these with any type of attribute data. A lot of Apps are available for various kinds of problem domains, including bioinformatics, social network analysis, and semantic web. @@ -7,3 +11,6 @@ Cytoscape is an open source software platform for visualizing complex networks version | versionsuffix | toolchain --------|---------------|---------- ``3.9.1`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/c-ares.md b/docs/version-specific/supported-software/c/c-ares.md index 02f873952..6a4587749 100644 --- a/docs/version-specific/supported-software/c/c-ares.md +++ b/docs/version-specific/supported-software/c/c-ares.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # c-ares c-ares is a C library for asynchronous DNS requests (including name resolves) @@ -12,3 +16,6 @@ version | toolchain ``1.18.1`` | ``GCCcore/11.3.0`` ``1.19.1`` | ``GCCcore/12.3.0`` ``1.27.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cDNA_Cupcake.md b/docs/version-specific/supported-software/c/cDNA_Cupcake.md index 46590d78e..cc4bf3672 100644 --- a/docs/version-specific/supported-software/c/cDNA_Cupcake.md +++ b/docs/version-specific/supported-software/c/cDNA_Cupcake.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cDNA_Cupcake cDNA_Cupcake is a miscellaneous collection of Python and R scripts used for analyzing sequencing data. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``24.2.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``26.0.0`` | | ``foss/2021a`` ``5.8`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cURL.md b/docs/version-specific/supported-software/c/cURL.md index 878f0ac18..b168f31dd 100644 --- a/docs/version-specific/supported-software/c/cURL.md +++ b/docs/version-specific/supported-software/c/cURL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cURL libcurl is a free and easy-to-use client-side URL transfer library, supporting DICT, FILE, FTP, FTPS, Gopher, HTTP, HTTPS, IMAP, IMAPS, LDAP, LDAPS, POP3, POP3S, RTMP, RTSP, SCP, SFTP, SMTP, SMTPS, Telnet and TFTP. libcurl supports SSL certificates, HTTP POST, HTTP PUT, FTP uploading, HTTP form based upload, proxies, cookies, user+password authentication (Basic, Digest, NTLM, Negotiate, Kerberos), file transfer resume, http proxy tunneling and more. @@ -43,3 +47,6 @@ version | toolchain ``8.0.1`` | ``GCCcore/13.1.0`` ``8.3.0`` | ``GCCcore/13.2.0`` ``8.7.1`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cadaver.md b/docs/version-specific/supported-software/c/cadaver.md index 3b5de1b5d..5ec3805e0 100644 --- a/docs/version-specific/supported-software/c/cadaver.md +++ b/docs/version-specific/supported-software/c/cadaver.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cadaver cadaver is a command-line WebDAV client for Unix. @@ -7,3 +11,6 @@ cadaver is a command-line WebDAV client for Unix. version | toolchain --------|---------- ``0.23.3`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cairo.md b/docs/version-specific/supported-software/c/cairo.md index 8ccbd0601..31ad4833c 100644 --- a/docs/version-specific/supported-software/c/cairo.md +++ b/docs/version-specific/supported-software/c/cairo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cairo Cairo is a 2D graphics library with support for multiple output devices. Currently supported output targets include the X Window System (via both Xlib and XCB), Quartz, Win32, image buffers, PostScript, PDF, and SVG file output. Experimental backends include OpenGL, BeOS, OS/2, and DirectFB @@ -28,3 +32,6 @@ version | versionsuffix | toolchain ``1.17.4`` | | ``GCCcore/12.2.0`` ``1.17.8`` | | ``GCCcore/12.3.0`` ``1.18.0`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cairomm.md b/docs/version-specific/supported-software/c/cairomm.md index e15534ee3..1a5a66f20 100644 --- a/docs/version-specific/supported-software/c/cairomm.md +++ b/docs/version-specific/supported-software/c/cairomm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cairomm The Cairomm package provides a C++ interface to Cairo. @@ -9,3 +13,6 @@ version | toolchain ``1.12.2`` | ``GCCcore/6.4.0`` ``1.12.2`` | ``GCCcore/7.3.0`` ``1.16.2`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/canu.md b/docs/version-specific/supported-software/c/canu.md index 6b33b6c33..5dd06d801 100644 --- a/docs/version-specific/supported-software/c/canu.md +++ b/docs/version-specific/supported-software/c/canu.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # canu Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION). Canu is a hierarchical assembly pipeline which runs in four steps: Detect overlaps in high-noise sequences using MHAP Generate corrected sequence consensus Trim corrected sequences Assemble trimmed corrected sequences @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``2.2`` | | ``GCCcore/10.3.0`` ``2.2`` | | ``GCCcore/11.2.0`` ``2.2`` | | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/captum.md b/docs/version-specific/supported-software/c/captum.md index be039038b..ee20a282e 100644 --- a/docs/version-specific/supported-software/c/captum.md +++ b/docs/version-specific/supported-software/c/captum.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # captum Captum is a model interpretability and understanding library for PyTorch. Captum means comprehension in Latin and contains general purpose implementations of integrated gradients, saliency maps, smoothgrad, vargrad and others for PyTorch models. It has quick integration for models built with domain-specific libraries such as torchvision, torchtext, and others. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.5.0`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.5.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/carputils.md b/docs/version-specific/supported-software/c/carputils.md index ca3c9578b..302e6dcad 100644 --- a/docs/version-specific/supported-software/c/carputils.md +++ b/docs/version-specific/supported-software/c/carputils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # carputils carputils is a Python framework for generating and running openCARP examples. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``20200915`` | ``-Python-3.8.2`` | ``foss/2020a`` ``20210513`` | | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/casacore.md b/docs/version-specific/supported-software/c/casacore.md index 715f943fb..b360f83be 100644 --- a/docs/version-specific/supported-software/c/casacore.md +++ b/docs/version-specific/supported-software/c/casacore.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # casacore A suite of C++ libraries for radio astronomy data processing. The ephemerides data needs to be in DATA_DIR and the location must be specified at runtime. Thus user's can update them. @@ -9,3 +13,6 @@ version | toolchain ``3.4.0`` | ``foss/2021b`` ``3.5.0`` | ``foss/2022a`` ``3.5.0`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/castor.md b/docs/version-specific/supported-software/c/castor.md index 2b14b8475..1dc981ad5 100644 --- a/docs/version-specific/supported-software/c/castor.md +++ b/docs/version-specific/supported-software/c/castor.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # castor Efficient phylogenetic analyses on massive phylogenies comprising up to millions of tips. Functions include pruning, rerooting, calculation of most-recent common ancestors, calculating distances from the tree root and calculating pairwise distances. Calculation of phylogenetic signal and mean trait depth (trait conservatism), ancestral state reconstruction and hidden character prediction of discrete characters, simulating and fitting models of trait evolution, fitting and simulating diversification models, dating trees, comparing trees, and reading/writing trees in Newick format. @@ -7,3 +11,6 @@ Efficient phylogenetic analyses on massive phylogenies comprising up to millions version | toolchain --------|---------- ``1.7.11`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/category_encoders.md b/docs/version-specific/supported-software/c/category_encoders.md index dc4a63e7c..8a3039c43 100644 --- a/docs/version-specific/supported-software/c/category_encoders.md +++ b/docs/version-specific/supported-software/c/category_encoders.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # category_encoders A set of scikit-learn-style transformers for encoding categorical variables into numeric by means of different techniques. @@ -7,3 +11,6 @@ A set of scikit-learn-style transformers for encoding categorical variables into version | toolchain --------|---------- ``2.4.1`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/causallift.md b/docs/version-specific/supported-software/c/causallift.md index 9805d3e62..581b8de6c 100644 --- a/docs/version-specific/supported-software/c/causallift.md +++ b/docs/version-specific/supported-software/c/causallift.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # causallift CausalLift: Python package for Uplift Modeling in real-world business; applicable for both A/B testing and observational data @@ -7,3 +11,6 @@ CausalLift: Python package for Uplift Modeling in real-world business; applicabl version | versionsuffix | toolchain --------|---------------|---------- ``1.0.6`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/causalml.md b/docs/version-specific/supported-software/c/causalml.md index 6f1bf14c3..aab63ff48 100644 --- a/docs/version-specific/supported-software/c/causalml.md +++ b/docs/version-specific/supported-software/c/causalml.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # causalml Causal ML: A Python Package for Uplift Modeling and Causal Inference with ML @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.3.0-20180610`` | ``-Python-3.7.2`` | ``foss/2019a`` ``0.8.0-20200909`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/ccache.md b/docs/version-specific/supported-software/c/ccache.md index 99721355d..27aa353ab 100644 --- a/docs/version-specific/supported-software/c/ccache.md +++ b/docs/version-specific/supported-software/c/ccache.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ccache ccache-3.1.9: Cache for C/C++ compilers @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``4.9`` | | ``GCCcore/12.2.0`` ``4.9`` | | ``GCCcore/12.3.0`` ``4.9`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cclib.md b/docs/version-specific/supported-software/c/cclib.md index 234cfdc6e..154b9c0b9 100644 --- a/docs/version-specific/supported-software/c/cclib.md +++ b/docs/version-specific/supported-software/c/cclib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cclib cclib is a Python library that provides parsers for computational chemistry log files. It alsoprovides a platform to implement algorithms in a package-independent manner. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``1.6.3`` | ``-Python-3.8.2`` | ``intel/2020a`` ``1.7.2`` | | ``foss/2021b`` ``1.8`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cctbx-base.md b/docs/version-specific/supported-software/c/cctbx-base.md index 3f691e2b2..e9015b262 100644 --- a/docs/version-specific/supported-software/c/cctbx-base.md +++ b/docs/version-specific/supported-software/c/cctbx-base.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cctbx-base The Computational Crystallography Toolbox (cctbx) is being developed as the open source component of the Phenix project. The goal of the Phenix project is to advance automation of macromolecular structure determination. Phenix depends on the cctbx, but not vice versa. This hierarchical approach enforces a clean design as a reusable library. The cctbx is therefore also useful for small-molecule crystallography and even general scientific applications. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2020.8`` | ``foss/2020b`` ``2020.8`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cctools.md b/docs/version-specific/supported-software/c/cctools.md index 38754d83c..a20a4dc9e 100644 --- a/docs/version-specific/supported-software/c/cctools.md +++ b/docs/version-specific/supported-software/c/cctools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cctools The Cooperating Computing Tools (CCTools) help you to design and deploy scalable applications that run on hundreds or thousands of machines at once. @@ -7,3 +11,6 @@ The Cooperating Computing Tools (CCTools) help you to design and deploy scalabl version | toolchain --------|---------- ``7.0.22`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cdbfasta.md b/docs/version-specific/supported-software/c/cdbfasta.md index 139698bcd..d63d7fe51 100644 --- a/docs/version-specific/supported-software/c/cdbfasta.md +++ b/docs/version-specific/supported-software/c/cdbfasta.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cdbfasta Fasta file indexing and retrival tool @@ -9,3 +13,6 @@ version | toolchain ``0.99`` | ``GCC/8.3.0`` ``0.99`` | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` ``0.99`` | ``iccifort/2019.5.281`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cddlib.md b/docs/version-specific/supported-software/c/cddlib.md index c6ba6d553..7c58dbd56 100644 --- a/docs/version-specific/supported-software/c/cddlib.md +++ b/docs/version-specific/supported-software/c/cddlib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cddlib An efficient implementation of the Double Description Method @@ -10,3 +14,6 @@ version | toolchain ``0.94j`` | ``GCCcore/8.3.0`` ``0.94m`` | ``GCCcore/11.3.0`` ``0.94m`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cdo-bindings.md b/docs/version-specific/supported-software/c/cdo-bindings.md index 7510cbc1e..8a54d382d 100644 --- a/docs/version-specific/supported-software/c/cdo-bindings.md +++ b/docs/version-specific/supported-software/c/cdo-bindings.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cdo-bindings Python interface to CDO. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.5.7`` | ``foss/2021b`` ``1.6.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cdsapi.md b/docs/version-specific/supported-software/c/cdsapi.md index 061875c2b..be2b4194a 100644 --- a/docs/version-specific/supported-software/c/cdsapi.md +++ b/docs/version-specific/supported-software/c/cdsapi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cdsapi Climate Data Store API @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.1.4`` | | ``foss/2019a`` ``0.3.0`` | | ``GCCcore/9.3.0`` ``0.5.1`` | | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cell2location.md b/docs/version-specific/supported-software/c/cell2location.md index 4b9329eb3..ef5f97027 100644 --- a/docs/version-specific/supported-software/c/cell2location.md +++ b/docs/version-specific/supported-software/c/cell2location.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cell2location Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model) @@ -7,3 +11,6 @@ Comprehensive mapping of tissue cell architecture via integrated single cell an version | toolchain --------|---------- ``0.05-alpha`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/centerline.md b/docs/version-specific/supported-software/c/centerline.md index ea743f3ad..5376e4429 100644 --- a/docs/version-specific/supported-software/c/centerline.md +++ b/docs/version-specific/supported-software/c/centerline.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # centerline Roads, rivers and similar linear structures are often represented by long and complex polygons. Since one of the most important attributes of a linear structure is its length, extracting that attribute from a polygon can prove to be more or less difficult. This library tries to solve this problem by creating the the polygon's centerline using the Voronoi diagram. For more info on how to use this package, see the official documentation. @@ -7,3 +11,6 @@ Roads, rivers and similar linear structures are often represented by long and co version | toolchain --------|---------- ``1.0.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cffi.md b/docs/version-specific/supported-software/c/cffi.md index b524f1810..837835862 100644 --- a/docs/version-specific/supported-software/c/cffi.md +++ b/docs/version-specific/supported-software/c/cffi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cffi C Foreign Function Interface for Python. Interact with almost any C code from Python, based on C-like declarations that you can often copy-paste from header files or documentation. @@ -10,3 +14,6 @@ version | toolchain ``1.15.1`` | ``GCCcore/12.3.0`` ``1.15.1`` | ``GCCcore/13.2.0`` ``1.16.0`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cftime.md b/docs/version-specific/supported-software/c/cftime.md index cc952332c..8360d7682 100644 --- a/docs/version-specific/supported-software/c/cftime.md +++ b/docs/version-specific/supported-software/c/cftime.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cftime Time-handling functionality from netcdf4-python @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``1.0.1`` | ``-Python-3.6.6`` | ``foss/2018b`` ``1.0.1`` | ``-Python-2.7.15`` | ``intel/2018b`` ``1.0.1`` | ``-Python-3.6.6`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cget.md b/docs/version-specific/supported-software/c/cget.md index 9d46baa78..1d1080ad0 100644 --- a/docs/version-specific/supported-software/c/cget.md +++ b/docs/version-specific/supported-software/c/cget.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cget Cmake package retrieval. This can be used to download and install cmake packages @@ -7,3 +11,6 @@ Cmake package retrieval. This can be used to download and install cmake packages version | versionsuffix | toolchain --------|---------------|---------- ``0.1.6`` | ``-Python-3.6.4`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/charm-gems.md b/docs/version-specific/supported-software/c/charm-gems.md index d54a09b9c..683868a57 100644 --- a/docs/version-specific/supported-software/c/charm-gems.md +++ b/docs/version-specific/supported-software/c/charm-gems.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # charm-gems This repository contains the gems C++ code and python bindings used in Freesurfer's Sequence-Adaptive Multimodal SEGmentation (SAMSEG) and in SimNIBS 4.0 Complete Head Anatomy Reconstruction Method (CHARM) to create individualized head models for electric field simulations. @@ -7,3 +11,6 @@ This repository contains the gems C++ code and python bindings used in Freesurf version | toolchain --------|---------- ``1.3.3`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/chemprop.md b/docs/version-specific/supported-software/c/chemprop.md index 8c9d43b56..1d3e19b2a 100644 --- a/docs/version-specific/supported-software/c/chemprop.md +++ b/docs/version-specific/supported-software/c/chemprop.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # chemprop Message Passing Neural Networks for Molecule Property Prediction @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.5.2`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``1.5.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/chewBBACA.md b/docs/version-specific/supported-software/c/chewBBACA.md index 6936f6a99..961c22fc3 100644 --- a/docs/version-specific/supported-software/c/chewBBACA.md +++ b/docs/version-specific/supported-software/c/chewBBACA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # chewBBACA chewBBACA stands for "BSR-Based Allele Calling Algorithm". chewBBACA is a comprehensive pipeline including a set of functions for the creation and validation of whole genome and core genome MultiLocus Sequence Typing (wg/cgMLST) schemas, providing an allele calling algorithm based on Blast Score Ratio that can be run in multiprocessor settings and a set of functions to visualize and validate allele variation in the loci. @@ -7,3 +11,6 @@ chewBBACA stands for "BSR-Based Allele Calling Algorithm". chewBBACA is a compre version | versionsuffix | toolchain --------|---------------|---------- ``2.5.5`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/chi2comb.md b/docs/version-specific/supported-software/c/chi2comb.md index eeea221a1..5adf3cfdb 100644 --- a/docs/version-specific/supported-software/c/chi2comb.md +++ b/docs/version-specific/supported-software/c/chi2comb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # chi2comb Cumulative density function of linear combinations of independent chi-square random variables and a standard Normal distribution. As of now, this is basically a repackaging of the davies function implemented in the CompQuadForm library for R. @@ -7,3 +11,6 @@ Cumulative density function of linear combinations of independent chi-square ran version | toolchain --------|---------- ``0.0.3`` | ``GCCcore/7.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/chromVARmotifs.md b/docs/version-specific/supported-software/c/chromVARmotifs.md index b29d0359f..d7ad727fd 100644 --- a/docs/version-specific/supported-software/c/chromVARmotifs.md +++ b/docs/version-specific/supported-software/c/chromVARmotifs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # chromVARmotifs The goal of chromVARmotifs is to make it easy to use several different motif collections in R, particularly for use with motifmatchr and chromVAR packages. @@ -7,3 +11,6 @@ The goal of chromVARmotifs is to make it easy to use several different motif col version | versionsuffix | toolchain --------|---------------|---------- ``0.2.0`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cicero.md b/docs/version-specific/supported-software/c/cicero.md index 5455dbaad..37fcee4c1 100644 --- a/docs/version-specific/supported-software/c/cicero.md +++ b/docs/version-specific/supported-software/c/cicero.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cicero Cicero is an R package that provides tools for analyzing single-cell chromatin accessibility experiments. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.3.4.11`` | ``-R-4.0.3-Monocle3`` | ``foss/2020b`` ``1.3.8`` | ``-R-4.2.1-Monocle3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cimfomfa.md b/docs/version-specific/supported-software/c/cimfomfa.md index 95c790d37..2796e8eea 100644 --- a/docs/version-specific/supported-software/c/cimfomfa.md +++ b/docs/version-specific/supported-software/c/cimfomfa.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cimfomfa This library supports both MCL, a cluster algorithm for graphs, and zoem, a macro/DSL language. It supplies abstractions for memory management, I/O, associative arrays, strings, heaps, and a few other things. The string library has had heavy testing as part of zoem. Both understandably and regrettably I chose long ago to make it C-string-compatible, hence nul bytes may not be part of a string. At some point I hope to rectify this, perhaps unrealistically. @@ -9,3 +13,6 @@ version | toolchain ``22.273`` | ``GCCcore/11.2.0`` ``22.273`` | ``GCCcore/11.3.0`` ``22.273`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cisTEM.md b/docs/version-specific/supported-software/c/cisTEM.md index 25f5b6dba..02bffb00d 100644 --- a/docs/version-specific/supported-software/c/cisTEM.md +++ b/docs/version-specific/supported-software/c/cisTEM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cisTEM cisTEM is user-friendly software to process cryo-EM images of macromolecular complexes and obtain high-resolution 3D reconstructions from them. @@ -7,3 +11,6 @@ cisTEM is user-friendly software to process cryo-EM images of macromolecular com version | toolchain --------|---------- ``1.0.0-beta`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cliquer.md b/docs/version-specific/supported-software/c/cliquer.md index 4a152b1b5..a27901ebc 100644 --- a/docs/version-specific/supported-software/c/cliquer.md +++ b/docs/version-specific/supported-software/c/cliquer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cliquer Cliquer is a set of C routines for finding cliques in an arbitrary weighted graph. It uses an exact branch-and-bound algorithm developed by Patric Ostergard. It is designed with the aim of being efficient while still being flexible and easy to use. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.21`` | ``GCCcore/11.3.0`` ``1.21`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cmocean.md b/docs/version-specific/supported-software/c/cmocean.md index 1ce4e3098..e0e980d2e 100644 --- a/docs/version-specific/supported-software/c/cmocean.md +++ b/docs/version-specific/supported-software/c/cmocean.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cmocean This package contains colormaps for commonly-used oceanographic variables. Most of the colormaps started from matplotlib colormaps, but have now been adjusted using the viscm tool to be perceptually uniform. @@ -7,3 +11,6 @@ This package contains colormaps for commonly-used oceanographic variables. Most version | toolchain --------|---------- ``2.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cmph.md b/docs/version-specific/supported-software/c/cmph.md index fba471b5b..264ffb1b2 100644 --- a/docs/version-specific/supported-software/c/cmph.md +++ b/docs/version-specific/supported-software/c/cmph.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cmph Cmph is a free minimal perfect hash C library, providing several algorithms in the literature in a consistent, ease to use, API. @@ -7,3 +11,6 @@ Cmph is a free minimal perfect hash C library, providing several algorithms in t version | toolchain --------|---------- ``2.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/code-cli.md b/docs/version-specific/supported-software/c/code-cli.md index 250ba00a7..25ebe737c 100644 --- a/docs/version-specific/supported-software/c/code-cli.md +++ b/docs/version-specific/supported-software/c/code-cli.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # code-cli Visual Studio Code is a lightweight but powerful source code editor which runs on your desktop and is available for Windows, macOS and Linux. It comes with built-in support for JavaScript, TypeScript and Node.js and has a rich ecosystem of extensions for other languages and runtimes (such as C++, C#, Java, Python, PHP, Go, .NET). Begin your journey with VS Code with these introductory videos. @@ -7,3 +11,6 @@ Visual Studio Code is a lightweight but powerful source code editor which r version | versionsuffix | toolchain --------|---------------|---------- ``1.85.1`` | ``-x64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/code-server.md b/docs/version-specific/supported-software/c/code-server.md index 757325f7e..bd119ed4d 100644 --- a/docs/version-specific/supported-software/c/code-server.md +++ b/docs/version-specific/supported-software/c/code-server.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # code-server Run VS Code on any machine anywhere and access it in the browser. @@ -12,3 +16,6 @@ version | toolchain ``4.22.1`` | ``system`` ``4.89.1`` | ``system`` ``4.9.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/colossalai.md b/docs/version-specific/supported-software/c/colossalai.md index c54cb6657..8a6ea0bfc 100644 --- a/docs/version-specific/supported-software/c/colossalai.md +++ b/docs/version-specific/supported-software/c/colossalai.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # colossalai Colossal-AI: A Unified Deep Learning System for Big Model Era @@ -7,3 +11,6 @@ Colossal-AI: A Unified Deep Learning System for Big Model Era version | versionsuffix | toolchain --------|---------------|---------- ``0.1.8`` | ``-CUDA-11.3.1`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/conan.md b/docs/version-specific/supported-software/c/conan.md index 9e94845c8..c723d6d20 100644 --- a/docs/version-specific/supported-software/c/conan.md +++ b/docs/version-specific/supported-software/c/conan.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # conan Decentralized, open-source (MIT), C/C++ package manager. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.58.0`` | ``GCCcore/11.3.0`` ``1.60.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/configparser.md b/docs/version-specific/supported-software/c/configparser.md index 13ace09c6..93f918fec 100644 --- a/docs/version-specific/supported-software/c/configparser.md +++ b/docs/version-specific/supported-software/c/configparser.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # configparser configparser is a Python library that brings the updated configparser from Python 3.5 to Python 2.6-3.5 @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``3.5.0`` | ``-Python-2.7.12`` | ``intel/2016b`` ``3.5.0`` | ``-Python-3.5.2`` | ``intel/2016b`` ``3.5.0`` | ``-Python-3.6.3`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/configurable-http-proxy.md b/docs/version-specific/supported-software/c/configurable-http-proxy.md index e1da10040..4be955397 100644 --- a/docs/version-specific/supported-software/c/configurable-http-proxy.md +++ b/docs/version-specific/supported-software/c/configurable-http-proxy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # configurable-http-proxy HTTP proxy for node.js including a REST API for updating the routing table. Developed as a part of the Jupyter Hub multi-user server. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``4.5.5`` | | ``GCCcore/12.2.0`` ``4.5.6`` | | ``GCCcore/12.3.0`` ``4.6.1`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/connected-components-3d.md b/docs/version-specific/supported-software/c/connected-components-3d.md index afe040a06..6d325c22b 100644 --- a/docs/version-specific/supported-software/c/connected-components-3d.md +++ b/docs/version-specific/supported-software/c/connected-components-3d.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # connected-components-3d cc3d is an implementation of connected components in three dimensions using a 26, 18, or 6-connected neighborhood in 3D or 4 and 8-connected in 2D. @@ -7,3 +11,6 @@ cc3d is an implementation of connected components in three dimensions using a 26 version | toolchain --------|---------- ``3.12.1`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/contextily.md b/docs/version-specific/supported-software/c/contextily.md index 72cf53f24..a7b1c36b4 100644 --- a/docs/version-specific/supported-software/c/contextily.md +++ b/docs/version-specific/supported-software/c/contextily.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # contextily contextily is a small Python 3 package to retrieve tile maps from the internet. It can add those tiles as basemap to matplotlib figures or write tile maps to disk into geospatial raster files. Bounding boxes can be passed in both WGS84 (EPSG:4326) and Spheric Mercator (EPSG:3857). @@ -7,3 +11,6 @@ contextily is a small Python 3 package to retrieve tile maps from the internet. version | toolchain --------|---------- ``1.5.0`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cooler.md b/docs/version-specific/supported-software/c/cooler.md index 5988d4ebb..b8c8363a7 100644 --- a/docs/version-specific/supported-software/c/cooler.md +++ b/docs/version-specific/supported-software/c/cooler.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cooler Cooler is a support library for a storage format, also called cooler, used to store genomic interaction data of any size, such as Hi-C contact matrices. @@ -7,3 +11,6 @@ Cooler is a support library for a storage format, also called cooler, used to st version | toolchain --------|---------- ``0.9.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/core-counter.md b/docs/version-specific/supported-software/c/core-counter.md index b42baa5c8..5d9ebf76a 100644 --- a/docs/version-specific/supported-software/c/core-counter.md +++ b/docs/version-specific/supported-software/c/core-counter.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # core-counter Tool to check available cores and OMP threads @@ -7,3 +11,6 @@ Tool to check available cores and OMP threads version | toolchain --------|---------- ``1.1.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/corner.md b/docs/version-specific/supported-software/c/corner.md index 1015b48ab..8c7c508bf 100644 --- a/docs/version-specific/supported-software/c/corner.md +++ b/docs/version-specific/supported-software/c/corner.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # corner Make some beautiful corner plots. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.0.1`` | ``-Python-2.7.15`` | ``foss/2019a`` ``2.0.1`` | ``-Python-3.7.2`` | ``foss/2019a`` ``2.2.2`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/coverage.md b/docs/version-specific/supported-software/c/coverage.md index f46c04d30..5a1866bac 100644 --- a/docs/version-specific/supported-software/c/coverage.md +++ b/docs/version-specific/supported-software/c/coverage.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # coverage Coverage.py is a tool for measuring code coverage of Python programs. It monitors your program, noting which parts of the code have been executed, then analyzes the source to identify code that could have been executed but was not. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``7.2.3`` | | ``GCCcore/12.3.0`` ``7.2.7`` | | ``GCCcore/11.3.0`` ``7.4.4`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cowsay.md b/docs/version-specific/supported-software/c/cowsay.md index 4508e3ebf..f02ed3e59 100644 --- a/docs/version-specific/supported-software/c/cowsay.md +++ b/docs/version-specific/supported-software/c/cowsay.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cowsay Configurable talking characters in ASCII art @@ -7,3 +11,6 @@ Configurable talking characters in ASCII art version | toolchain --------|---------- ``3.04`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cpio.md b/docs/version-specific/supported-software/c/cpio.md index 4de58cb0d..101d7907d 100644 --- a/docs/version-specific/supported-software/c/cpio.md +++ b/docs/version-specific/supported-software/c/cpio.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cpio The cpio package contains tools for archiving. @@ -11,3 +15,6 @@ version | toolchain ``2.15`` | ``GCCcore/12.3.0`` ``2.15`` | ``GCCcore/13.2.0`` ``2.15`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cppy.md b/docs/version-specific/supported-software/c/cppy.md index 465aa5aa2..20fef7787 100644 --- a/docs/version-specific/supported-software/c/cppy.md +++ b/docs/version-specific/supported-software/c/cppy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cppy A small C++ header library which makes it easier to write Python extension modules. The primary feature is a PyObject smart pointer which automatically handles reference counting and provides convenience methods for performing common object operations. @@ -12,3 +16,6 @@ version | toolchain ``1.2.1`` | ``GCCcore/12.2.0`` ``1.2.1`` | ``GCCcore/12.3.0`` ``1.2.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cppyy.md b/docs/version-specific/supported-software/c/cppyy.md index a48928d21..f623b3bea 100644 --- a/docs/version-specific/supported-software/c/cppyy.md +++ b/docs/version-specific/supported-software/c/cppyy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cppyy cppyy is an automatic, run-time, Python-C++ bindings generator, for calling C++ from Python and Python from C++. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.0.0`` | ``GCCcore/11.3.0`` ``3.1.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cppzmq.md b/docs/version-specific/supported-software/c/cppzmq.md index b0ff35cf4..fe13ea23c 100644 --- a/docs/version-specific/supported-software/c/cppzmq.md +++ b/docs/version-specific/supported-software/c/cppzmq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cppzmq cppzmq is a C++ binding for libzmq. @@ -7,3 +11,6 @@ cppzmq is a C++ binding for libzmq. version | toolchain --------|---------- ``4.9.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cpu_features.md b/docs/version-specific/supported-software/c/cpu_features.md index 8734d978c..1e2f0563b 100644 --- a/docs/version-specific/supported-software/c/cpu_features.md +++ b/docs/version-specific/supported-software/c/cpu_features.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cpu_features A cross-platform C library to retrieve CPU features (such as available instructions) at runtime. @@ -7,3 +11,6 @@ A cross-platform C library to retrieve CPU features (such as available instructi version | toolchain --------|---------- ``0.6.0`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cram.md b/docs/version-specific/supported-software/c/cram.md index 374b825c6..e5e140def 100644 --- a/docs/version-specific/supported-software/c/cram.md +++ b/docs/version-specific/supported-software/c/cram.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cram Cram is a functional testing framework for command line applications. @@ -7,3 +11,6 @@ Cram is a functional testing framework for command line applications. version | toolchain --------|---------- ``0.7`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cramtools.md b/docs/version-specific/supported-software/c/cramtools.md index 82d6ba6a9..064278ad9 100644 --- a/docs/version-specific/supported-software/c/cramtools.md +++ b/docs/version-specific/supported-software/c/cramtools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cramtools CRAMTools is a set of Java tools and APIs for efficient compression of sequence read data. Although this is intended as a stable version the code is released as early access. Parts of the CRAMTools are experimental and may not be supported in the future. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.0`` | ``-Java-1.7.0_80`` | ``system`` ``3.0`` | ``-Java-1.7.0_80`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/crb-blast.md b/docs/version-specific/supported-software/c/crb-blast.md index 0e33275c1..3f4225a35 100644 --- a/docs/version-specific/supported-software/c/crb-blast.md +++ b/docs/version-specific/supported-software/c/crb-blast.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # crb-blast Conditional Reciprocal Best BLAST - high confidence ortholog assignment. CRB-BLAST is a novel method for finding orthologs between one set of sequences and another. This is particularly useful in genome and transcriptome annotation. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.6.9`` | | ``gompi/2021a`` ``0.6.9`` | | ``gompi/2021b`` ``0.6.9`` | | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cromwell.md b/docs/version-specific/supported-software/c/cromwell.md index 8f3d967b7..19b02d467 100644 --- a/docs/version-specific/supported-software/c/cromwell.md +++ b/docs/version-specific/supported-software/c/cromwell.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cromwell Cromwell is a Workflow Management System geared towards scientific workflows. @@ -7,3 +11,6 @@ Cromwell is a Workflow Management System geared towards scientific workflows. version | versionsuffix | toolchain --------|---------------|---------- ``56`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/crossguid.md b/docs/version-specific/supported-software/c/crossguid.md index 80980ca7d..d67151525 100644 --- a/docs/version-specific/supported-software/c/crossguid.md +++ b/docs/version-specific/supported-software/c/crossguid.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # crossguid CrossGuid is a minimal, cross platform, C++ GUID library. It uses the best native GUID/UUID generator on the given platform and has a generic class for parsing, stringifying, and comparing IDs. The guid generation technique is determined by your platform: @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20190529`` | ``GCCcore/11.2.0`` ``20190529`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cryoCARE.md b/docs/version-specific/supported-software/c/cryoCARE.md index 10bc0cafb..a868de99c 100644 --- a/docs/version-specific/supported-software/c/cryoCARE.md +++ b/docs/version-specific/supported-software/c/cryoCARE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cryoCARE This package is a memory efficient implementation of cryoCARE. This setup trains a denoising U-Net for tomographic reconstruction according to the Noise2Noise training paradigm. Therefore the user has to provide two tomograms of the same sample. The simplest way to achieve this is with direct- detector movie-frames. You can use Warp to generate two reconstructed tomograms based on the even/odd frames. Alternatively, the movie-frames can be split in two halves (e.g. with MotionCor2 -SplitSum 1 or with IMOD alignframes -debug 10000) from which two identical, up to random noise, tomograms can be reconstructed. These two (even and odd) tomograms can be used as input to this cryoCARE implementation. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.2.1`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``0.3.0`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cryoDRGN.md b/docs/version-specific/supported-software/c/cryoDRGN.md index c35b67c08..2b7ab4045 100644 --- a/docs/version-specific/supported-software/c/cryoDRGN.md +++ b/docs/version-specific/supported-software/c/cryoDRGN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cryoDRGN cryoDRGN: Deep Reconstructing Generative Networks for cryo-EM heterogeneous reconstruction. CryoDRGN is a neural network based algorithm for heterogeneous cryo-EM reconstruction. In particular, the method models a continuous distribution over 3D structures by using a neural network based representation for the volume. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.3.2`` | | ``fosscuda/2020b`` ``0.3.5`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``1.0.0-beta`` | ``-CUDA-11.3.1`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cryptography.md b/docs/version-specific/supported-software/c/cryptography.md index abe3ac060..e671552c8 100644 --- a/docs/version-specific/supported-software/c/cryptography.md +++ b/docs/version-specific/supported-software/c/cryptography.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cryptography cryptography is a package designed to expose cryptographic primitives and recipes to Python developers. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``41.0.1`` | ``GCCcore/12.3.0`` ``41.0.5`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cscope.md b/docs/version-specific/supported-software/c/cscope.md index 5eb53145d..c478a7329 100644 --- a/docs/version-specific/supported-software/c/cscope.md +++ b/docs/version-specific/supported-software/c/cscope.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cscope Cscope is a developer's tool for browsing source code. @@ -7,3 +11,6 @@ Cscope is a developer's tool for browsing source code. version | toolchain --------|---------- ``15.9`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/csvkit.md b/docs/version-specific/supported-software/c/csvkit.md index 3e43e7fd6..c5e92bee8 100644 --- a/docs/version-specific/supported-software/c/csvkit.md +++ b/docs/version-specific/supported-software/c/csvkit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # csvkit csvkit is a suite of command-line tools for converting to and working with CSV, the king of tabular file formats. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.0.4`` | | ``GCCcore/8.2.0`` ``1.0.5`` | ``-Python-3.7.4`` | ``GCCcore/8.3.0`` ``1.1.0`` | | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/ctags.md b/docs/version-specific/supported-software/c/ctags.md index 994621009..5ec7220e7 100644 --- a/docs/version-specific/supported-software/c/ctags.md +++ b/docs/version-specific/supported-software/c/ctags.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ctags Ctags generates an index (or tag) file of language objects found in source files that allows these items to be quickly and easily located by a text editor or other utility. @@ -7,3 +11,6 @@ Ctags generates an index (or tag) file of language objects found in source files version | toolchain --------|---------- ``5.8`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/ctffind.md b/docs/version-specific/supported-software/c/ctffind.md index 412e75f49..878d0f801 100644 --- a/docs/version-specific/supported-software/c/ctffind.md +++ b/docs/version-specific/supported-software/c/ctffind.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ctffind Program for finding CTFs of electron micrographs. @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``4.1.14`` | | ``foss/2023a`` ``4.1.14`` | | ``fosscuda/2019b`` ``4.1.14`` | | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/ctffind5.md b/docs/version-specific/supported-software/c/ctffind5.md index 814cdd6bf..92e5b2d03 100644 --- a/docs/version-specific/supported-software/c/ctffind5.md +++ b/docs/version-specific/supported-software/c/ctffind5.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ctffind5 Program for finding CTFs of electron micrographs. @@ -7,3 +11,6 @@ Program for finding CTFs of electron micrographs. version | toolchain --------|---------- ``5.0.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cuDNN.md b/docs/version-specific/supported-software/c/cuDNN.md index 523d37134..7c7d3106e 100644 --- a/docs/version-specific/supported-software/c/cuDNN.md +++ b/docs/version-specific/supported-software/c/cuDNN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cuDNN The NVIDIA CUDA Deep Neural Network library (cuDNN) is a GPU-accelerated library of primitives for deep neural networks. @@ -47,3 +51,6 @@ version | versionsuffix | toolchain ``8.9.2.26`` | ``-CUDA-12.1.1`` | ``system`` ``8.9.2.26`` | ``-CUDA-12.2.0`` | ``system`` ``8.9.7.29`` | ``-CUDA-12.3.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cuSPARSELt.md b/docs/version-specific/supported-software/c/cuSPARSELt.md index abfada078..2113794d7 100644 --- a/docs/version-specific/supported-software/c/cuSPARSELt.md +++ b/docs/version-specific/supported-software/c/cuSPARSELt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cuSPARSELt NVIDIA cuSPARSELt is a high-performance CUDA library dedicated to general matrix-matrix operations in which at least one operand is a sparse matrix @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.3.0.3`` | ``-CUDA-11.4.1`` | ``system`` ``0.6.0.6`` | ``-CUDA-12.1.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cuTENSOR.md b/docs/version-specific/supported-software/c/cuTENSOR.md index 432b24ae8..86775394a 100644 --- a/docs/version-specific/supported-software/c/cuTENSOR.md +++ b/docs/version-specific/supported-software/c/cuTENSOR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cuTENSOR The cuTENSOR Library is a GPU-accelerated tensor linear algebra library providing tensor contraction, reduction and elementwise operations. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``1.7.0.1`` | ``-CUDA-12.0.0`` | ``system`` ``2.0.1.2`` | ``-CUDA-12.1.1`` | ``system`` ``2.0.1.2`` | ``-CUDA-12.2.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/currentNe.md b/docs/version-specific/supported-software/c/currentNe.md index 2c3fbf946..8cde0d8cc 100644 --- a/docs/version-specific/supported-software/c/currentNe.md +++ b/docs/version-specific/supported-software/c/currentNe.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # currentNe Estimation of current effective population using artificial neural networks. @@ -7,3 +11,6 @@ Estimation of current effective population using artificial neural networks. version | toolchain --------|---------- ``1.0.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/custodian.md b/docs/version-specific/supported-software/c/custodian.md index 4ead77e04..eb0ca5a43 100644 --- a/docs/version-specific/supported-software/c/custodian.md +++ b/docs/version-specific/supported-software/c/custodian.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # custodian A simple JIT job management framework in Python. @@ -7,3 +11,6 @@ A simple JIT job management framework in Python. version | versionsuffix | toolchain --------|---------------|---------- ``1.1.0`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cutadapt.md b/docs/version-specific/supported-software/c/cutadapt.md index 4c9d05d7b..857691370 100644 --- a/docs/version-specific/supported-software/c/cutadapt.md +++ b/docs/version-specific/supported-software/c/cutadapt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cutadapt Cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads. @@ -35,3 +39,6 @@ version | versionsuffix | toolchain ``3.5`` | | ``GCCcore/11.2.0`` ``4.2`` | | ``GCCcore/11.3.0`` ``4.4`` | | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cuteSV.md b/docs/version-specific/supported-software/c/cuteSV.md index 6c912a724..cf7da57d3 100644 --- a/docs/version-specific/supported-software/c/cuteSV.md +++ b/docs/version-specific/supported-software/c/cuteSV.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cuteSV cuteSV uses tailored methods to collect the signatures of various types of SVs and employs a clustering-and-refinement method to analyze the signatures to implement sensitive SV detection. @@ -7,3 +11,6 @@ cuteSV uses tailored methods to collect the signatures of various types of SVs version | toolchain --------|---------- ``2.0.3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cwltool.md b/docs/version-specific/supported-software/c/cwltool.md index e42f2d671..bd1f38c7c 100644 --- a/docs/version-specific/supported-software/c/cwltool.md +++ b/docs/version-specific/supported-software/c/cwltool.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cwltool Common workflow language (CWL) reference implementation. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.1.20221008225030`` | ``foss/2021a`` ``3.1.20221018083734`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cxxopts.md b/docs/version-specific/supported-software/c/cxxopts.md index 8b0d0092c..82c66066c 100644 --- a/docs/version-specific/supported-software/c/cxxopts.md +++ b/docs/version-specific/supported-software/c/cxxopts.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cxxopts cxxopts is a lightweight C++ command line option parser @@ -7,3 +11,6 @@ cxxopts is a lightweight C++ command line option parser version | toolchain --------|---------- ``3.0.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cysignals.md b/docs/version-specific/supported-software/c/cysignals.md index 8e7c181ba..b4701a244 100644 --- a/docs/version-specific/supported-software/c/cysignals.md +++ b/docs/version-specific/supported-software/c/cysignals.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cysignals The cysignals package provides mechanisms to handle interrupts (and other signals and errors) in Cython code. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``1.10.2`` | ``-Python-3.6.3`` | ``intel/2017b`` ``1.11.2`` | | ``GCCcore/11.3.0`` ``1.11.4`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cython-blis.md b/docs/version-specific/supported-software/c/cython-blis.md index f45f4970d..664304d97 100644 --- a/docs/version-specific/supported-software/c/cython-blis.md +++ b/docs/version-specific/supported-software/c/cython-blis.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cython-blis Fast BLAS-like operations from Python and Cython, without the tears. Provides the Blis linear algebra routines as a self-contained Python C-extension. @@ -7,3 +11,6 @@ Fast BLAS-like operations from Python and Cython, without the tears. Provides th version | toolchain --------|---------- ``0.9.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cytoolz.md b/docs/version-specific/supported-software/c/cytoolz.md index c90ed7fa9..f0ae3fcca 100644 --- a/docs/version-specific/supported-software/c/cytoolz.md +++ b/docs/version-specific/supported-software/c/cytoolz.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cytoolz Cython implementation of the toolz package, which provides high performance utility functions for iterables, functions, and dictionaries. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.10.1`` | ``-Python-3.7.2`` | ``GCCcore/8.2.0`` ``0.10.1`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cytosim.md b/docs/version-specific/supported-software/c/cytosim.md index c9362e00a..703a76c52 100644 --- a/docs/version-specific/supported-software/c/cytosim.md +++ b/docs/version-specific/supported-software/c/cytosim.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cytosim Cytosim is a cytoskeleton simulation engine written in C++ working on Mac OS, GNU/Linux and Windows (with Cygwin). @@ -7,3 +11,6 @@ Cytosim is a cytoskeleton simulation engine written in C++ working on Mac OS, G version | versionsuffix | toolchain --------|---------------|---------- ``20190117`` | ``-mkl`` | ``gomkl/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/cyvcf2.md b/docs/version-specific/supported-software/c/cyvcf2.md index 63502e664..654e15858 100644 --- a/docs/version-specific/supported-software/c/cyvcf2.md +++ b/docs/version-specific/supported-software/c/cyvcf2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # cyvcf2 cython + htslib == fast VCF and BCF processing @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.10.10`` | ``-Python-3.6.6`` | ``foss/2018b`` ``0.11.5`` | | ``foss/2019a`` ``0.11.5`` | | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/c/index.md b/docs/version-specific/supported-software/c/index.md index 4ad1bc86b..e1d8a9140 100644 --- a/docs/version-specific/supported-software/c/index.md +++ b/docs/version-specific/supported-software/c/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (c) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - *c* - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [c-ares](c-ares.md) * [C3D](C3D.md) * [cadaver](cadaver.md) diff --git a/docs/version-specific/supported-software/d/DALI.md b/docs/version-specific/supported-software/d/DALI.md index 8bac18135..56537d8e3 100644 --- a/docs/version-specific/supported-software/d/DALI.md +++ b/docs/version-specific/supported-software/d/DALI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DALI R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem @@ -7,3 +11,6 @@ R-package for the analysis of single-cell TCR/BCR data in the Seurat ecosystem version | versionsuffix | toolchain --------|---------------|---------- ``2.1.2`` | ``-R-4.2.2`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DANPOS2.md b/docs/version-specific/supported-software/d/DANPOS2.md index faf363da3..90b548629 100644 --- a/docs/version-specific/supported-software/d/DANPOS2.md +++ b/docs/version-specific/supported-software/d/DANPOS2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DANPOS2 A toolkit for Dynamic Analysis of Nucleosome and Protein Occupancy by Sequencing, version 2 @@ -7,3 +11,6 @@ A toolkit for Dynamic Analysis of Nucleosome and Protein Occupancy by Sequencing version | versionsuffix | toolchain --------|---------------|---------- ``2.2.2`` | ``-Python-2.7.12`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DAS_Tool.md b/docs/version-specific/supported-software/d/DAS_Tool.md index 7dee75867..e51dd5734 100644 --- a/docs/version-specific/supported-software/d/DAS_Tool.md +++ b/docs/version-specific/supported-software/d/DAS_Tool.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DAS_Tool DAS Tool is an automated method that integrates the results of a flexible number of binning algorithms to calculate an optimized, non-redundant set of bins from a single assembly. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.1.1`` | ``-R-3.5.1-Python-2.7.15`` | ``foss/2018b`` ``1.1.1`` | ``-R-4.1.2`` | ``foss/2021b`` ``1.1.3`` | ``-R-4.1.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DB.md b/docs/version-specific/supported-software/d/DB.md index f0cc85867..2698852c7 100644 --- a/docs/version-specific/supported-software/d/DB.md +++ b/docs/version-specific/supported-software/d/DB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DB Berkeley DB enables the development of custom data management solutions, without the overhead traditionally associated with such custom projects. @@ -24,3 +28,6 @@ version | toolchain ``6.2.23`` | ``foss/2016a`` ``6.2.32`` | ``GCCcore/6.4.0`` ``6.2.32`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DBCSR.md b/docs/version-specific/supported-software/d/DBCSR.md index f24cd6a45..c02b6c91b 100644 --- a/docs/version-specific/supported-software/d/DBCSR.md +++ b/docs/version-specific/supported-software/d/DBCSR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DBCSR DBCSR stands for Distributed Blocked Compressed Sparse Row. DBCSR is a library designed to efficiently perform sparse matrix-matrix multiplication, among other operations. @@ -7,3 +11,6 @@ DBCSR stands for Distributed Blocked Compressed Sparse Row. DBCSR is a library d version | toolchain --------|---------- ``2.5.0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DBD-mysql.md b/docs/version-specific/supported-software/d/DBD-mysql.md index 720d06899..25a86cce5 100644 --- a/docs/version-specific/supported-software/d/DBD-mysql.md +++ b/docs/version-specific/supported-software/d/DBD-mysql.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DBD-mysql Perl binding for MySQL @@ -18,3 +22,6 @@ version | versionsuffix | toolchain ``4.050`` | | ``GCC/11.3.0`` ``4.050`` | | ``GCC/12.2.0`` ``4.050`` | ``-Perl-5.28.1`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DBG2OLC.md b/docs/version-specific/supported-software/d/DBG2OLC.md index 6d8fc87fc..71176941a 100644 --- a/docs/version-specific/supported-software/d/DBG2OLC.md +++ b/docs/version-specific/supported-software/d/DBG2OLC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DBG2OLC DBG2OLC:Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies @@ -11,3 +15,6 @@ version | toolchain ``20180221`` | ``GCC/6.4.0-2.28`` ``20180221`` | ``iccifort/2017.4.196-GCC-6.4.0-2.28`` ``20200724`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DB_File.md b/docs/version-specific/supported-software/d/DB_File.md index 7eda9af97..705e77389 100644 --- a/docs/version-specific/supported-software/d/DB_File.md +++ b/docs/version-specific/supported-software/d/DB_File.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DB_File Perl5 access to Berkeley DB version 1.x. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``1.857`` | | ``GCCcore/11.2.0`` ``1.858`` | | ``GCCcore/11.3.0`` ``1.859`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DBus.md b/docs/version-specific/supported-software/d/DBus.md index a7a8132d2..dec0a7dd8 100644 --- a/docs/version-specific/supported-software/d/DBus.md +++ b/docs/version-specific/supported-software/d/DBus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DBus D-Bus is a message bus system, a simple way for applications to talk to one another. In addition to interprocess communication, D-Bus helps coordinate process lifecycle; it makes it simple and reliable to code a "single instance" application or daemon, and to launch applications and daemons on demand when their services are needed. @@ -24,3 +28,6 @@ version | toolchain ``1.15.2`` | ``GCCcore/12.2.0`` ``1.15.4`` | ``GCCcore/12.3.0`` ``1.15.8`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DCMTK.md b/docs/version-specific/supported-software/d/DCMTK.md index 34ae677bc..3be746173 100644 --- a/docs/version-specific/supported-software/d/DCMTK.md +++ b/docs/version-specific/supported-software/d/DCMTK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DCMTK DCMTK is a collection of libraries and applications implementing large parts the DICOM standard. It includes software for examining, constructing and converting DICOM image files, handling offline media, sending and receiving images over a network connection, as well as demonstrative image storage and worklist servers. @@ -12,3 +16,6 @@ version | toolchain ``3.6.6`` | ``GCCcore/10.3.0`` ``3.6.6`` | ``GCCcore/11.2.0`` ``3.6.7`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DEICODE.md b/docs/version-specific/supported-software/d/DEICODE.md index 0d8fcd974..8338fc82f 100644 --- a/docs/version-specific/supported-software/d/DEICODE.md +++ b/docs/version-specific/supported-software/d/DEICODE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DEICODE DEICODE is a form of Aitchison Distance that is robust to high levels of sparsity. DEICODE utilizes a natural solution to the zero problem formulated in recommendation systems called matrix completion. A simple way to interpret the method is, as a robust compositional PCA (via SVD) where zero values do not influence the resulting ordination. @@ -7,3 +11,6 @@ DEICODE is a form of Aitchison Distance that is robust to high levels of sparsit version | toolchain --------|---------- ``0.2.4`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DETONATE.md b/docs/version-specific/supported-software/d/DETONATE.md index f7f924cc4..514678f3e 100644 --- a/docs/version-specific/supported-software/d/DETONATE.md +++ b/docs/version-specific/supported-software/d/DETONATE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DETONATE DETONATE (DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation) consists of two component packages, RSEM-EVAL and REF-EVAL. Both packages are mainly intended to be used to evaluate de novo transcriptome assemblies, although REF-EVAL can be used to compare sets of any kinds of genomic sequences. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.11`` | ``GCC/12.3.0`` ``1.11`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DFA.md b/docs/version-specific/supported-software/d/DFA.md index 03cbf4f9d..84804834d 100644 --- a/docs/version-specific/supported-software/d/DFA.md +++ b/docs/version-specific/supported-software/d/DFA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DFA Python library for modeling DFAs, Moore Machines, and Transition Systems. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.3.4`` | ``-Python-3.8.2`` | ``GCCcore/9.3.0`` ``2.1.2`` | | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DFT-D3.md b/docs/version-specific/supported-software/d/DFT-D3.md index 59098ef7f..96a24c9d5 100644 --- a/docs/version-specific/supported-software/d/DFT-D3.md +++ b/docs/version-specific/supported-software/d/DFT-D3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DFT-D3 DFT-D3 implements a dispersion correction for density functionals, Hartree-Fock and semi-empirical quantum chemical methods. @@ -12,3 +16,6 @@ version | toolchain ``3.2.0`` | ``intel-compilers/2021.2.0`` ``3.2.0`` | ``intel-compilers/2021.4.0`` ``3.2.0`` | ``intel-compilers/2022.2.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DFT-D4.md b/docs/version-specific/supported-software/d/DFT-D4.md index 73178fdea..958465626 100644 --- a/docs/version-specific/supported-software/d/DFT-D4.md +++ b/docs/version-specific/supported-software/d/DFT-D4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DFT-D4 Generally Applicable Atomic-Charge Dependent London Dispersion Correction. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.2.0`` | ``-Python-3.7.4`` | ``intel/2019b`` ``3.6.0`` | | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DFTB+.md b/docs/version-specific/supported-software/d/DFTB+.md index 97c581246..d7cf80c5e 100644 --- a/docs/version-specific/supported-software/d/DFTB+.md +++ b/docs/version-specific/supported-software/d/DFTB+.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DFTB+ DFTB+ is a fast and efficient versatile quantum mechanical simulation package. It is based on the Density Functional Tight Binding (DFTB) method, containing almost all of the useful extensions which have been developed for the DFTB framework so far. Using DFTB+ you can carry out quantum mechanical simulations like with ab-initio density functional theory based packages, but in an approximate way gaining typically around two order of magnitude in speed. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``19.1`` | ``-Python-2.7.16-mpi`` | ``foss/2019b`` ``19.1`` | ``-Python-2.7.16`` | ``foss/2019b`` ``21.1`` | | ``intel/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DGL.md b/docs/version-specific/supported-software/d/DGL.md index 05162c95f..3e40a3d2d 100644 --- a/docs/version-specific/supported-software/d/DGL.md +++ b/docs/version-specific/supported-software/d/DGL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DGL DGL is an easy-to-use, high performance and scalable Python package for deep learning on graphs. DGL is framework agnostic, meaning if a deep graph model is a component of an end-to-end application, the rest of the logics can be implemented in any major frameworks, such as PyTorch, Apache MXNet or TensorFlow. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.6.1`` | ``-Python-3.7.4-PyTorch-1.8.1`` | ``fosscuda/2019b`` ``0.9.1`` | ``-CUDA-11.3.1`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DIA-NN.md b/docs/version-specific/supported-software/d/DIA-NN.md index 3cd2e3abd..3cd8b58ac 100644 --- a/docs/version-specific/supported-software/d/DIA-NN.md +++ b/docs/version-specific/supported-software/d/DIA-NN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DIA-NN DIA-NN is a universal software for data-independent acquisition (DIA) proteomics data processing. @@ -7,3 +11,6 @@ DIA-NN is a universal software for data-independent acquisition (DIA) proteomic version | toolchain --------|---------- ``1.8.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DIAL.md b/docs/version-specific/supported-software/d/DIAL.md index c0ca7db89..bfad96161 100644 --- a/docs/version-specific/supported-software/d/DIAL.md +++ b/docs/version-specific/supported-software/d/DIAL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DIAL DIAL (De novo Identification of Alleles) is a collection of programs to automate the discovery of alleles for a species where we lack a reference sequence. The SNPs/alleles are specifically selected for a low error rate in genotyping assays. @@ -7,3 +11,6 @@ DIAL (De novo Identification of Alleles) is a collection of programs to automat version | toolchain --------|---------- ``2011.06.06`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DIALOGUE.md b/docs/version-specific/supported-software/d/DIALOGUE.md index 628c464b8..d02a091e7 100644 --- a/docs/version-specific/supported-software/d/DIALOGUE.md +++ b/docs/version-specific/supported-software/d/DIALOGUE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DIALOGUE DIALOGUE is a dimensionality reduction method that uses cross-cell-type associations to identify multicellular programs (MCPs) and map the cell transcriptome as a function of its environment. @@ -7,3 +11,6 @@ DIALOGUE is a dimensionality reduction method that uses cross-cell-type associat version | versionsuffix | toolchain --------|---------------|---------- ``1.0-20230228`` | ``-R-4.2.0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DIAMOND.md b/docs/version-specific/supported-software/d/DIAMOND.md index 59392c96f..6116ec5e0 100644 --- a/docs/version-specific/supported-software/d/DIAMOND.md +++ b/docs/version-specific/supported-software/d/DIAMOND.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DIAMOND Accelerated BLAST compatible local sequence aligner @@ -25,3 +29,6 @@ version | toolchain ``2.1.8`` | ``GCC/12.2.0`` ``2.1.8`` | ``GCC/12.3.0`` ``2.1.9`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DIRAC.md b/docs/version-specific/supported-software/d/DIRAC.md index ecf6db7db..cc17d69b7 100644 --- a/docs/version-specific/supported-software/d/DIRAC.md +++ b/docs/version-specific/supported-software/d/DIRAC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DIRAC DIRAC: Program for Atomic and Molecular Direct Iterative Relativistic All-electron Calculations @@ -19,3 +23,6 @@ version | versionsuffix | toolchain ``23.0`` | | ``intel/2022b`` ``23.0`` | ``-int64`` | ``intel/2023a`` ``23.0`` | | ``intel/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DLPack.md b/docs/version-specific/supported-software/d/DLPack.md index ec9d76d64..ba45e49d6 100644 --- a/docs/version-specific/supported-software/d/DLPack.md +++ b/docs/version-specific/supported-software/d/DLPack.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DLPack DLPack is a stable in-memory data structure for an ndarray system to interact with a variety of frameworks. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.3`` | ``GCC/10.3.0`` ``0.8`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DL_POLY_4.md b/docs/version-specific/supported-software/d/DL_POLY_4.md index fc276a7f2..8cc00b210 100644 --- a/docs/version-specific/supported-software/d/DL_POLY_4.md +++ b/docs/version-specific/supported-software/d/DL_POLY_4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DL_POLY_4 DL_POLY is a general purpose classical molecular dynamics (MD) simulation software @@ -10,3 +14,6 @@ version | toolchain ``5.0.0`` | ``intel/2020b`` ``5.1.0`` | ``foss/2022b`` ``5.1.0`` | ``intel/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DL_POLY_Classic.md b/docs/version-specific/supported-software/d/DL_POLY_Classic.md index d6cea0397..21611bdf2 100644 --- a/docs/version-specific/supported-software/d/DL_POLY_Classic.md +++ b/docs/version-specific/supported-software/d/DL_POLY_Classic.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DL_POLY_Classic DL_POLY Classic is a general purpose (parallel and serial) molecular dynamics simulation package. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.10`` | | ``intel/2019b`` ``1.9`` | ``-PLUMED-2.2.3`` | ``intel/2016b`` ``1.9`` | | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DMCfun.md b/docs/version-specific/supported-software/d/DMCfun.md index 24288fb09..5e45cfa0a 100644 --- a/docs/version-specific/supported-software/d/DMCfun.md +++ b/docs/version-specific/supported-software/d/DMCfun.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DMCfun Diffusion Model of Conflict (DMC) in Reaction Time Tasks @@ -7,3 +11,6 @@ Diffusion Model of Conflict (DMC) in Reaction Time Tasks version | versionsuffix | toolchain --------|---------------|---------- ``1.3.0`` | ``-R-3.6.2`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DMLC-Core.md b/docs/version-specific/supported-software/d/DMLC-Core.md index 6bb3b740a..5bab0d2dd 100644 --- a/docs/version-specific/supported-software/d/DMLC-Core.md +++ b/docs/version-specific/supported-software/d/DMLC-Core.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DMLC-Core DMLC-Core is the backbone library to support all DMLC projects, offers the bricks to build efficient and scalable distributed machine learning libraries. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.5`` | ``GCC/10.3.0`` ``0.5`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DMTCP.md b/docs/version-specific/supported-software/d/DMTCP.md index 95b61a077..2b0b82dc1 100644 --- a/docs/version-specific/supported-software/d/DMTCP.md +++ b/docs/version-specific/supported-software/d/DMTCP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DMTCP DMTCP (Distributed MultiThreaded Checkpointing) transparently checkpoints a single-host or distributed computation in user-space -- with no modifications to user code or to the O/S. @@ -15,3 +19,6 @@ version | toolchain ``2.6.0`` | ``GCCcore/8.2.0`` ``2.6.0`` | ``GCCcore/9.3.0`` ``3.0.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DOLFIN.md b/docs/version-specific/supported-software/d/DOLFIN.md index 7102bab43..d0d3c3223 100644 --- a/docs/version-specific/supported-software/d/DOLFIN.md +++ b/docs/version-specific/supported-software/d/DOLFIN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DOLFIN DOLFIN is the C++/Python interface of FEniCS, providing a consistent PSE (Problem Solving Environment) for ordinary and partial differential equations. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2018.1.0.post1`` | ``-Python-3.6.4`` | ``foss/2018a`` ``2019.1.0.post0`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DP3.md b/docs/version-specific/supported-software/d/DP3.md index 336e7227e..a4d5b8ef6 100644 --- a/docs/version-specific/supported-software/d/DP3.md +++ b/docs/version-specific/supported-software/d/DP3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DP3 DP3: streaming processing pipeline for radio interferometric data. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``6.0`` | ``foss/2022a`` ``6.0`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DRAGMAP.md b/docs/version-specific/supported-software/d/DRAGMAP.md index 134bd4dce..ee4e1418b 100644 --- a/docs/version-specific/supported-software/d/DRAGMAP.md +++ b/docs/version-specific/supported-software/d/DRAGMAP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DRAGMAP Dragmap is the Dragen mapper/aligner Open Source Software. @@ -7,3 +11,6 @@ Dragmap is the Dragen mapper/aligner Open Source Software. version | toolchain --------|---------- ``1.3.0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DROP.md b/docs/version-specific/supported-software/d/DROP.md index 77539b13b..33dfc9886 100644 --- a/docs/version-specific/supported-software/d/DROP.md +++ b/docs/version-specific/supported-software/d/DROP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DROP Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.0.3`` | ``-R-4.0.3`` | ``foss/2020b`` ``1.1.0`` | ``-R-4.0.3`` | ``foss/2020b`` ``1.1.1`` | ``-R-4.1.2`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DSA.md b/docs/version-specific/supported-software/d/DSA.md index 38bee8065..f46b38ad6 100644 --- a/docs/version-specific/supported-software/d/DSA.md +++ b/docs/version-specific/supported-software/d/DSA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DSA Digital Sorting Algorithm @@ -7,3 +11,6 @@ Digital Sorting Algorithm version | versionsuffix | toolchain --------|---------------|---------- ``1.0`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DSRC.md b/docs/version-specific/supported-software/d/DSRC.md index 4a08cb984..324f67183 100644 --- a/docs/version-specific/supported-software/d/DSRC.md +++ b/docs/version-specific/supported-software/d/DSRC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DSRC DNA Sequence Reads Compression is an application designed for compression of data files containing reads from DNA sequencing in FASTQ format. The amount of such files can be huge, e.g., a few (or tens) of gigabytes, so a need for a robust data compression tool is clear. Usually universal compression programs like gzip or bzip2 are used for this purpose, but it is obvious that a specialized tool can work better. @@ -7,3 +11,6 @@ DNA Sequence Reads Compression is an application designed for compression of dat version | versionsuffix | toolchain --------|---------------|---------- ``2.0rc`` | ``-linux-64-bit`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DUBStepR.md b/docs/version-specific/supported-software/d/DUBStepR.md index 6b0047079..d2c7ad9a2 100644 --- a/docs/version-specific/supported-software/d/DUBStepR.md +++ b/docs/version-specific/supported-software/d/DUBStepR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DUBStepR DUBStepR (Determining the Underlying Basis using Step-wise Regression) is a feature selection algorithm for cell type identification in single-cell RNA-sequencing data. @@ -7,3 +11,6 @@ DUBStepR (Determining the Underlying Basis using Step-wise Regression) is a feat version | versionsuffix | toolchain --------|---------------|---------- ``1.2.0`` | ``-R-4.1.2`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/Dakota.md b/docs/version-specific/supported-software/d/Dakota.md index c5fbce71a..9cc06f0cf 100644 --- a/docs/version-specific/supported-software/d/Dakota.md +++ b/docs/version-specific/supported-software/d/Dakota.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Dakota The Dakota project delivers both state-of-the-art research and robust, usable software for optimization and UQ. Broadly, the Dakota software's advanced parametric analyses enable design exploration, model calibration, risk analysis, and quantification of margins and uncertainty with computational models. @@ -7,3 +11,6 @@ The Dakota project delivers both state-of-the-art research and robust, usable s version | toolchain --------|---------- ``6.16.0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DaliLite.md b/docs/version-specific/supported-software/d/DaliLite.md index ff1c191a3..158c8902d 100644 --- a/docs/version-specific/supported-software/d/DaliLite.md +++ b/docs/version-specific/supported-software/d/DaliLite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DaliLite DaliLite is a light version of the software run by the Dali server. The web server has search and data visualization options which are not included in this package. DaliLite supports data import (import.pl) to convert PDB entries to Dali's internal data format and pairwise comparison (dali.pl) to structurally align a list of query structures to a list of target structures. @@ -7,3 +11,6 @@ DaliLite is a light version of the software run by the Dali server. The web serv version | toolchain --------|---------- ``4.1`` | ``gompi/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/Dalton.md b/docs/version-specific/supported-software/d/Dalton.md index c18085afe..8bcf06949 100644 --- a/docs/version-specific/supported-software/d/Dalton.md +++ b/docs/version-specific/supported-software/d/Dalton.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Dalton The Dalton code is a powerful tool for a wide range of molecular properties at different levels of theory. Any published work arising from use of one of the Dalton2016 programs must acknowledge that by a proper reference, https://www.daltonprogram.org/www/citation.html. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2016`` | ``-i8`` | ``intel/2017b`` ``2020.0`` | | ``foss/2021a`` ``2020.1`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DeMixT.md b/docs/version-specific/supported-software/d/DeMixT.md index 09ae15cdb..3bd126cd7 100644 --- a/docs/version-specific/supported-software/d/DeMixT.md +++ b/docs/version-specific/supported-software/d/DeMixT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DeMixT Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platforms. @@ -7,3 +11,6 @@ Cell type-specific deconvolution of heterogeneous tumor samples with two or thre version | versionsuffix | toolchain --------|---------------|---------- ``0.2.1`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DeconICA.md b/docs/version-specific/supported-software/d/DeconICA.md index 8824f6d10..b5da87658 100644 --- a/docs/version-specific/supported-software/d/DeconICA.md +++ b/docs/version-specific/supported-software/d/DeconICA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DeconICA Deconvolution of transcriptome through Immune Component Analysis (DeconICA) is an R package for identifying immune-related signals in transcriptome through deconvolution or unsupervised source separation methods. @@ -7,3 +11,6 @@ Deconvolution of transcriptome through Immune Component Analysis (DeconICA) is a version | versionsuffix | toolchain --------|---------------|---------- ``0.1.0`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DeepLabCut.md b/docs/version-specific/supported-software/d/DeepLabCut.md index e972c6b46..7e635e5f1 100644 --- a/docs/version-specific/supported-software/d/DeepLabCut.md +++ b/docs/version-specific/supported-software/d/DeepLabCut.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DeepLabCut Markerless tracking of user-defined features with deep learning @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.2.0.6`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``2.2.0.6`` | | ``foss/2021a`` ``2.3.6`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DeepLoc.md b/docs/version-specific/supported-software/d/DeepLoc.md index fab2a1f26..0d2f9c5fd 100644 --- a/docs/version-specific/supported-software/d/DeepLoc.md +++ b/docs/version-specific/supported-software/d/DeepLoc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DeepLoc DeepLoc 2.0 predicts the subcellular localization(s) of eukaryotic proteins @@ -7,3 +11,6 @@ DeepLoc 2.0 predicts the subcellular localization(s) of eukaryotic proteins version | toolchain --------|---------- ``2.0`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DeepMod2.md b/docs/version-specific/supported-software/d/DeepMod2.md index 3d727947d..fe9c69699 100644 --- a/docs/version-specific/supported-software/d/DeepMod2.md +++ b/docs/version-specific/supported-software/d/DeepMod2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DeepMod2 DeepMod2 is a computational tool for detecting DNA methylation and modifications from Oxford Nanopore reads. @@ -7,3 +11,6 @@ DeepMod2 is a computational tool for detecting DNA methylation and modifications version | toolchain --------|---------- ``0.0.1`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DeepSurv.md b/docs/version-specific/supported-software/d/DeepSurv.md index 04681a0f8..ff6c3d636 100644 --- a/docs/version-specific/supported-software/d/DeepSurv.md +++ b/docs/version-specific/supported-software/d/DeepSurv.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DeepSurv DeepSurv is a deep learning approach to survival analysis. @@ -7,3 +11,6 @@ DeepSurv is a deep learning approach to survival analysis. version | versionsuffix | toolchain --------|---------------|---------- ``2.0.0-20180922`` | ``-Python-3.6.6`` | ``fosscuda/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/Delft3D.md b/docs/version-specific/supported-software/d/Delft3D.md index 74670d3a2..9db86c5e2 100644 --- a/docs/version-specific/supported-software/d/Delft3D.md +++ b/docs/version-specific/supported-software/d/Delft3D.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Delft3D Simulation of multi-dimensional hydrodynamic flows and transport phenomena, including sediments. Delft3D-FLOW is part of Delft3D 4. @@ -7,3 +11,6 @@ Simulation of multi-dimensional hydrodynamic flows and transport phenomena, incl version | versionsuffix | toolchain --------|---------------|---------- ``4.04.01`` | ``-FLOW`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/Delly.md b/docs/version-specific/supported-software/d/Delly.md index 209eeeee5..7c0e89f11 100644 --- a/docs/version-specific/supported-software/d/Delly.md +++ b/docs/version-specific/supported-software/d/Delly.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Delly Delly is an integrated structural variant (SV) prediction method that can discover, genotype and visualize deletions, tandem duplications, inversions and translocations at single-nucleotide resolution in short-read massively parallel sequencing data. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.8.7`` | | ``gompi/2020b`` ``1.1.5`` | | ``GCC/11.3.0`` ``1.1.6`` | | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DeltaLake.md b/docs/version-specific/supported-software/d/DeltaLake.md index 2ec362ddc..c6f75f2e4 100644 --- a/docs/version-specific/supported-software/d/DeltaLake.md +++ b/docs/version-specific/supported-software/d/DeltaLake.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DeltaLake Native Delta Lake Python binding based on delta-rs with Pandas integration. The Delta Lake project aims to unlock the power of the Deltalake for as many users and projects as possible by providing native low-level APIs aimed at developers and integrators, as well as a high-level operations API that lets you query, inspect, and operate your Delta Lake with ease. @@ -7,3 +11,6 @@ Native Delta Lake Python binding based on delta-rs with Pandas integration. The version | toolchain --------|---------- ``0.15.1`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/Demystify.md b/docs/version-specific/supported-software/d/Demystify.md index ac01edfbd..5485ec939 100644 --- a/docs/version-specific/supported-software/d/Demystify.md +++ b/docs/version-specific/supported-software/d/Demystify.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Demystify Demystify is a tool which allows puzzles to be expressed in a high-level constraint programming language and uses MUSes to automatically produce descriptions of steps in the puzzle solving. @@ -7,3 +11,6 @@ Demystify is a tool which allows puzzles to be expressed in a high-level constra version | toolchain --------|---------- ``0.0.17`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DendroPy.md b/docs/version-specific/supported-software/d/DendroPy.md index 3a30dd83b..c3623b00b 100644 --- a/docs/version-specific/supported-software/d/DendroPy.md +++ b/docs/version-specific/supported-software/d/DendroPy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DendroPy A Python library for phylogenetics and phylogenetic computing: reading, writing, simulation, processing and manipulation of phylogenetic trees (phylogenies) and characters. @@ -18,3 +22,6 @@ version | versionsuffix | toolchain ``4.5.2`` | | ``GCCcore/11.3.0`` ``4.5.2`` | | ``GCCcore/12.2.0`` ``4.6.1`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DensPart.md b/docs/version-specific/supported-software/d/DensPart.md index cbe6d3509..6f82dafda 100644 --- a/docs/version-specific/supported-software/d/DensPart.md +++ b/docs/version-specific/supported-software/d/DensPart.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DensPart Atoms-in-molecules density partitioning schemes based on stockholder recipe @@ -7,3 +11,6 @@ Atoms-in-molecules density partitioning schemes based on stockholder recipe version | toolchain --------|---------- ``20220603`` | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/Deprecated.md b/docs/version-specific/supported-software/d/Deprecated.md index 33c28444e..28a6428d1 100644 --- a/docs/version-specific/supported-software/d/Deprecated.md +++ b/docs/version-specific/supported-software/d/Deprecated.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Deprecated If you need to mark a function or a method as deprecated, you can use the @deprecated decorator. @@ -9,3 +13,6 @@ version | toolchain ``1.2.13`` | ``foss/2021a`` ``1.2.13`` | ``foss/2022a`` ``1.2.14`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/Detectron2.md b/docs/version-specific/supported-software/d/Detectron2.md index df8268b64..7103a83a3 100644 --- a/docs/version-specific/supported-software/d/Detectron2.md +++ b/docs/version-specific/supported-software/d/Detectron2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Detectron2 Detectron2 is Facebook AI Research's next generation library that provides state-of-the-art detection and segmentation algorithms. It is the successor of Detectron and maskrcnn-benchmark. It supports a number of computer vision research projects and production applications in Facebook. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.6`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``0.6`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/Devito.md b/docs/version-specific/supported-software/d/Devito.md index 62da8a7d2..e3091fc54 100644 --- a/docs/version-specific/supported-software/d/Devito.md +++ b/docs/version-specific/supported-software/d/Devito.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Devito Devito is a domain-specific Language (DSL) and code generation framework for performing optimised Finite Difference (FD) computation from high-level symbolic problem definitions. Devito performs automated code generation and Just-In-time (JIT) compilation based on symbolic equations defined in SymPy to create and execute highly optimised Finite Difference stencil kernels on multiple computer platforms. @@ -7,3 +11,6 @@ Devito is a domain-specific Language (DSL) and code generation framework for pe version | versionsuffix | toolchain --------|---------------|---------- ``4.6.1`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DiCE-ML.md b/docs/version-specific/supported-software/d/DiCE-ML.md index 698620678..91459ee7b 100644 --- a/docs/version-specific/supported-software/d/DiCE-ML.md +++ b/docs/version-specific/supported-software/d/DiCE-ML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DiCE-ML Diverse Counterfactual Explanations (DiCE) for ML @@ -7,3 +11,6 @@ Diverse Counterfactual Explanations (DiCE) for ML version | toolchain --------|---------- ``0.9`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/Dice.md b/docs/version-specific/supported-software/d/Dice.md index 37ea075bf..a27b6039c 100644 --- a/docs/version-specific/supported-software/d/Dice.md +++ b/docs/version-specific/supported-software/d/Dice.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Dice Dice contains code for performing SHCI, VMC, GFMC, DMC, FCIQMC, stochastic MRCI and SC-NEVPT2, and AFQMC calculations with a focus on ab initio systems. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20221025`` | ``foss/2022a`` ``20240101`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DicomBrowser.md b/docs/version-specific/supported-software/d/DicomBrowser.md index e5fb8a07d..863da237d 100644 --- a/docs/version-specific/supported-software/d/DicomBrowser.md +++ b/docs/version-specific/supported-software/d/DicomBrowser.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DicomBrowser DicomBrowser is an application for inspecting and modifying DICOM metadata in many files at once. @@ -7,3 +11,6 @@ DicomBrowser is an application for inspecting and modifying DICOM metadata in ma version | versionsuffix | toolchain --------|---------------|---------- ``1.7.0b5`` | ``-Java-1.7.0_80`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DiffBind.md b/docs/version-specific/supported-software/d/DiffBind.md index 857fbc569..89495c06f 100644 --- a/docs/version-specific/supported-software/d/DiffBind.md +++ b/docs/version-specific/supported-software/d/DiffBind.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DiffBind Compute differentially bound sites from multiple ChIP-seq experiments using affinity (quantitative) data. Also enables occupancy (overlap) analysis and plotting functions. @@ -7,3 +11,6 @@ Compute differentially bound sites from multiple ChIP-seq experiments using aff version | versionsuffix | toolchain --------|---------------|---------- ``3.6.5`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/Diffutils.md b/docs/version-specific/supported-software/d/Diffutils.md index 580a93af1..e2c2cf997 100644 --- a/docs/version-specific/supported-software/d/Diffutils.md +++ b/docs/version-specific/supported-software/d/Diffutils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Diffutils Diffutils: GNU diff utilities - find the differences between files @@ -7,3 +11,6 @@ Diffutils: GNU diff utilities - find the differences between files version | toolchain --------|---------- ``3.3`` | ``GCC/4.8.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DistributedStream.md b/docs/version-specific/supported-software/d/DistributedStream.md index 5588c1a32..4c43006fb 100644 --- a/docs/version-specific/supported-software/d/DistributedStream.md +++ b/docs/version-specific/supported-software/d/DistributedStream.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DistributedStream A MPI distributed stream benchmark, useful to identifying nodes with poor memory performance and characterising memory bandwidth variation over systems. @@ -7,3 +11,6 @@ A MPI distributed stream benchmark, useful to identifying nodes with poor memory version | toolchain --------|---------- ``1.0`` | ``gompi/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DjVuLibre.md b/docs/version-specific/supported-software/d/DjVuLibre.md index 517040b07..407d9766b 100644 --- a/docs/version-specific/supported-software/d/DjVuLibre.md +++ b/docs/version-specific/supported-software/d/DjVuLibre.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DjVuLibre DjVuLibre is an open source (GPL'ed) implementation of DjVu, including viewers, browser plugins, decoders, simple encoders, and utilities. @@ -7,3 +11,6 @@ DjVuLibre is an open source (GPL'ed) implementation of DjVu, including viewers, version | toolchain --------|---------- ``3.5.28`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/Doris.md b/docs/version-specific/supported-software/d/Doris.md index da906bde6..b08bcaa24 100644 --- a/docs/version-specific/supported-software/d/Doris.md +++ b/docs/version-specific/supported-software/d/Doris.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Doris Delft object-oriented radar interferometric software @@ -10,3 +14,6 @@ version | toolchain ``4.04beta4`` | ``foss/2018a`` ``4.04beta4`` | ``intel/2017a`` ``4.06beta2`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DosageConvertor.md b/docs/version-specific/supported-software/d/DosageConvertor.md index 5a06090fa..d86e60c93 100644 --- a/docs/version-specific/supported-software/d/DosageConvertor.md +++ b/docs/version-specific/supported-software/d/DosageConvertor.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DosageConvertor DosageConvertor is a C++ tool to convert dosage files (in VCF format) from Minimac3/4 to other formats such as MaCH or PLINK. Please note that this tool CANNOT handle missing values in the input files and may NOT work for non-Minimac3/4 VCF files. @@ -7,3 +11,6 @@ DosageConvertor is a C++ tool to convert dosage files (in VCF format) from Minim version | toolchain --------|---------- ``1.0.4`` | ``GCC/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DoubletFinder.md b/docs/version-specific/supported-software/d/DoubletFinder.md index 65c298b09..9100ab91c 100644 --- a/docs/version-specific/supported-software/d/DoubletFinder.md +++ b/docs/version-specific/supported-software/d/DoubletFinder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DoubletFinder R package for detecting doublets in single-cell RNA sequencing data @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.0.3-20230131`` | ``-R-4.2.1`` | ``foss/2022a`` ``2.0.3-20230819`` | ``-R-4.2.2`` | ``foss/2022b`` ``2.0.3`` | ``-R-4.0.0`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/Doxygen.md b/docs/version-specific/supported-software/d/Doxygen.md index f9ee5d3f7..41e8dc76a 100644 --- a/docs/version-specific/supported-software/d/Doxygen.md +++ b/docs/version-specific/supported-software/d/Doxygen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Doxygen Doxygen is a documentation system for C++, C, Java, Objective-C, Python, IDL (Corba and Microsoft flavors), Fortran, VHDL, PHP, C#, and to some extent D. @@ -34,3 +38,6 @@ version | toolchain ``1.9.5`` | ``GCCcore/12.2.0`` ``1.9.7`` | ``GCCcore/12.3.0`` ``1.9.8`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/Drake.md b/docs/version-specific/supported-software/d/Drake.md index 53dae00f1..5e0875978 100644 --- a/docs/version-specific/supported-software/d/Drake.md +++ b/docs/version-specific/supported-software/d/Drake.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Drake Drake is a simple-to-use, extensible, text-based data workflow tool that organizes command execution around data and its dependencies. @@ -7,3 +11,6 @@ Drake is a simple-to-use, extensible, text-based data workflow tool that organiz version | versionsuffix | toolchain --------|---------------|---------- ``1.0.3`` | ``-Java-1.8`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/Dsuite.md b/docs/version-specific/supported-software/d/Dsuite.md index f25ba5974..8005c4afa 100644 --- a/docs/version-specific/supported-software/d/Dsuite.md +++ b/docs/version-specific/supported-software/d/Dsuite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Dsuite Fast calculation of the ABBA-BABA statistics across many populations/species @@ -9,3 +13,6 @@ version | toolchain ``20190713`` | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` ``20210718`` | ``GCC/10.3.0`` ``20210718`` | ``intel-compilers/2021.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DualSPHysics.md b/docs/version-specific/supported-software/d/DualSPHysics.md index 4d6d6e238..815606d14 100644 --- a/docs/version-specific/supported-software/d/DualSPHysics.md +++ b/docs/version-specific/supported-software/d/DualSPHysics.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DualSPHysics DualSPHysics is based on the Smoothed Particle Hydrodynamics model named SPHysics. The code is developed to study free-surface flow phenomena where Eulerian methods can be difficult to apply, such as waves or impact of dam-breaks on off-shore structures. DualSPHysics is a set of C++, CUDA and Java codes designed to deal with real-life engineering problems. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``5.0.175`` | ``-CUDA-%(cudaver)s`` | ``GCC/11.2.0`` ``5.0.175`` | | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/DyMat.md b/docs/version-specific/supported-software/d/DyMat.md index 36acabb2e..b9b535cce 100644 --- a/docs/version-specific/supported-software/d/DyMat.md +++ b/docs/version-specific/supported-software/d/DyMat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # DyMat Read and process result files from Dymola and OpenModelica with Python. @@ -7,3 +11,6 @@ Read and process result files from Dymola and OpenModelica with Python. version | versionsuffix | toolchain --------|---------------|---------- ``0.7`` | ``-2020-12-12`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dRep.md b/docs/version-specific/supported-software/d/dRep.md index 5d677903e..bc5a69c5b 100644 --- a/docs/version-specific/supported-software/d/dRep.md +++ b/docs/version-specific/supported-software/d/dRep.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dRep dRep is a python program which performs rapid pair-wise comparison of genome sets. One of it’s major purposes is for genome de-replication, but it can do a lot more. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.0.0`` | ``foss/2021a`` ``3.4.2`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dSFMT.md b/docs/version-specific/supported-software/d/dSFMT.md index d12383be9..6b34e6ef6 100644 --- a/docs/version-specific/supported-software/d/dSFMT.md +++ b/docs/version-specific/supported-software/d/dSFMT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dSFMT Double precision SIMD-oriented Fast Mersenne Twister. @@ -7,3 +11,6 @@ Double precision SIMD-oriented Fast Mersenne Twister. version | toolchain --------|---------- ``2.2.5`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dadi.md b/docs/version-specific/supported-software/d/dadi.md index 855fcf677..f7c4ff387 100644 --- a/docs/version-specific/supported-software/d/dadi.md +++ b/docs/version-specific/supported-software/d/dadi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dadi ∂a∂i implements methods for demographic history and selection inference from genetic data, based on diffusion approximations to the allele frequency spectrum. @@ -7,3 +11,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.7.0`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dagitty.md b/docs/version-specific/supported-software/d/dagitty.md index ff447cee4..602f5107c 100644 --- a/docs/version-specific/supported-software/d/dagitty.md +++ b/docs/version-specific/supported-software/d/dagitty.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dagitty A port of the web-based software 'DAGitty', available at , for analyzing structural causal models (also known as directed acyclic graphs or DAGs). This package computes covariate adjustment sets for estimating causal effects, enumerates instrumental variables, derives testable implications (d-separation and vanishing tetrads), generates equivalent models, and includes a simple facility for data simulation. @@ -7,3 +11,6 @@ A port of the web-based software 'DAGitty', available at , f version | versionsuffix | toolchain --------|---------------|---------- ``0.2-2`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/damageproto.md b/docs/version-specific/supported-software/d/damageproto.md index 36cf6d9f8..fcf73ceaa 100644 --- a/docs/version-specific/supported-software/d/damageproto.md +++ b/docs/version-specific/supported-software/d/damageproto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # damageproto X protocol and ancillary headers for xinerama @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.2.1`` | ``foss/2016a`` ``1.2.1`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dammit.md b/docs/version-specific/supported-software/d/dammit.md index 05073bd86..a29795a97 100644 --- a/docs/version-specific/supported-software/d/dammit.md +++ b/docs/version-specific/supported-software/d/dammit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dammit dammit is a simple de novo transcriptome annotator. It was born out of the observations that annotation is mundane and annoying, all the individual pieces of the process exist already, and the existing solutions are overly complicated or rely on crappy non-free software. @@ -7,3 +11,6 @@ dammit is a simple de novo transcriptome annotator. It was born out of the obse version | versionsuffix | toolchain --------|---------------|---------- ``0.3.2`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dask-labextension.md b/docs/version-specific/supported-software/d/dask-labextension.md index 9dd501baf..1604e67fe 100644 --- a/docs/version-specific/supported-software/d/dask-labextension.md +++ b/docs/version-specific/supported-software/d/dask-labextension.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dask-labextension This package provides a JupyterLab extension to manage Dask clusters, as well as embed Dask's dashboard plots directly into JupyterLab panes. @@ -9,3 +13,6 @@ version | toolchain ``6.0.0`` | ``foss/2022a`` ``7.0.0`` | ``foss/2023a`` ``7.0.0`` | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dask.md b/docs/version-specific/supported-software/d/dask.md index 1d61b3d3c..7228145f9 100644 --- a/docs/version-specific/supported-software/d/dask.md +++ b/docs/version-specific/supported-software/d/dask.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dask Dask provides multi-core execution on larger-than-memory datasets using blocked algorithms and task scheduling. @@ -46,3 +50,6 @@ version | versionsuffix | toolchain ``2023.7.1`` | | ``foss/2022b`` ``2023.9.2`` | | ``foss/2023a`` ``2024.5.1`` | | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/datalad.md b/docs/version-specific/supported-software/d/datalad.md index 7a87f50b5..88fd3327b 100644 --- a/docs/version-specific/supported-software/d/datalad.md +++ b/docs/version-specific/supported-software/d/datalad.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # datalad DataLad is a free and open source distributed data management system that keeps track of your data, creates structure, ensures reproducibility, supports collaboration, and integrates with widely used data infrastructure. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.18.4`` | ``GCCcore/12.2.0`` ``0.19.5`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/datamash.md b/docs/version-specific/supported-software/d/datamash.md index 721ffe593..08e442f76 100644 --- a/docs/version-specific/supported-software/d/datamash.md +++ b/docs/version-specific/supported-software/d/datamash.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # datamash GNU datamash performs basic numeric, textual and statistical operations on input data files @@ -11,3 +15,6 @@ version | toolchain ``1.5`` | ``GCCcore/7.3.0`` ``1.5`` | ``GCCcore/8.3.0`` ``1.8`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/davix.md b/docs/version-specific/supported-software/d/davix.md index a3a934762..7e2302a00 100644 --- a/docs/version-specific/supported-software/d/davix.md +++ b/docs/version-specific/supported-software/d/davix.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # davix The davix project aims to make file management over HTTP-based protocols simple. The focus is on high-performance remote I/O and data management of large collections of files. Currently, there is support for the WebDav (link is external), Amazon S3 (link is external), Microsoft Azure (link is external), and HTTP (link is external) protocols. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.6.6`` | ``intel/2017a`` ``0.7.5`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dbus-glib.md b/docs/version-specific/supported-software/d/dbus-glib.md index cd77f012f..cbc962fa2 100644 --- a/docs/version-specific/supported-software/d/dbus-glib.md +++ b/docs/version-specific/supported-software/d/dbus-glib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dbus-glib D-Bus is a message bus system, a simple way for applications to talk to one another. @@ -17,3 +21,6 @@ version | toolchain ``0.112`` | ``GCCcore/10.3.0`` ``0.112`` | ``GCCcore/11.2.0`` ``0.112`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dclone.md b/docs/version-specific/supported-software/d/dclone.md index 4cc90b355..2b1c87aed 100644 --- a/docs/version-specific/supported-software/d/dclone.md +++ b/docs/version-specific/supported-software/d/dclone.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dclone Low level functions for implementing maximum likelihood estimating procedures for complex models using data cloning and Bayesian Markov chain Monte Carlo methods @@ -7,3 +11,6 @@ Low level functions for implementing maximum likelihood estimating procedures fo version | versionsuffix | toolchain --------|---------------|---------- ``2.3-0`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dcm2niix.md b/docs/version-specific/supported-software/d/dcm2niix.md index 4a389f6a5..970c828f3 100644 --- a/docs/version-specific/supported-software/d/dcm2niix.md +++ b/docs/version-specific/supported-software/d/dcm2niix.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dcm2niix dcm2niix is a designed program to convert neuroimaging data from the DICOM format to the NIfTI format. @@ -15,3 +19,6 @@ version | toolchain ``1.0.20211006`` | ``GCCcore/10.3.0`` ``1.0.20220720`` | ``GCCcore/11.3.0`` ``1.0.20230411`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dd.md b/docs/version-specific/supported-software/d/dd.md index cb05a213a..3aa1b687e 100644 --- a/docs/version-specific/supported-software/d/dd.md +++ b/docs/version-specific/supported-software/d/dd.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dd dd is a package for working with binary decision diagrams that includes both a pure Python implementation and Cython bindings to C libraries (CUDD, Sylvan, BuDDy). The Python and Cython modules implement the same API, so the same user code runs with both. All the standard operations on BDDs are available, including dynamic variable reordering using sifting, garbage collection, dump/load from files, plotting, and a parser of quantified Boolean expressions. This module includes bindings for: CUDD v3.0.0, Sylvan v1.0.0 @@ -7,3 +11,6 @@ dd is a package for working with binary decision diagrams that includes both a p version | versionsuffix | toolchain --------|---------------|---------- ``0.5.6`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/deal.II.md b/docs/version-specific/supported-software/d/deal.II.md index e21aebf4c..a4ccc6dbd 100644 --- a/docs/version-specific/supported-software/d/deal.II.md +++ b/docs/version-specific/supported-software/d/deal.II.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # deal.II deal.II is a C++ program library targeted at the computational solution of partial differential equations using adaptive finite elements. @@ -10,3 +14,6 @@ version | toolchain ``9.1.1`` | ``intel/2019a`` ``9.3.3`` | ``foss/2021a`` ``9.5.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/deap.md b/docs/version-specific/supported-software/d/deap.md index fe10370e4..071d4897e 100644 --- a/docs/version-specific/supported-software/d/deap.md +++ b/docs/version-specific/supported-software/d/deap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # deap DEAP is a novel evolutionary computation framework for rapid prototyping and testing of ideas. It seeks to make algorithms explicit and data structures transparent. @@ -7,3 +11,6 @@ DEAP is a novel evolutionary computation framework for rapid prototyping and tes version | versionsuffix | toolchain --------|---------------|---------- ``0.9.2`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/decona.md b/docs/version-specific/supported-software/d/decona.md index 073ff77af..7813606a2 100644 --- a/docs/version-specific/supported-software/d/decona.md +++ b/docs/version-specific/supported-software/d/decona.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # decona fastq to polished sequenses: pipeline suitable for mixed samples and long (Nanopore) reads @@ -7,3 +11,6 @@ fastq to polished sequenses: pipeline suitable for mixed samples and long (Nanop version | versionsuffix | toolchain --------|---------------|---------- ``0.1.2`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/deconf.md b/docs/version-specific/supported-software/d/deconf.md index bd792b90f..d016fd5c9 100644 --- a/docs/version-specific/supported-software/d/deconf.md +++ b/docs/version-specific/supported-software/d/deconf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # deconf decomposition (deconfounding) of OMICS datasets in heterogeneous tissues @@ -7,3 +11,6 @@ decomposition (deconfounding) of OMICS datasets in heterogeneous tissues version | versionsuffix | toolchain --------|---------------|---------- ``1.0.1`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/deepTools.md b/docs/version-specific/supported-software/d/deepTools.md index 44dc8d5e4..f66d2d1cc 100644 --- a/docs/version-specific/supported-software/d/deepTools.md +++ b/docs/version-specific/supported-software/d/deepTools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # deepTools deepTools is a suite of python tools particularly developed for the efficient analysis of high-throughput sequencing data, such as ChIP-seq, RNA-seq or MNase-seq. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``3.5.0`` | | ``foss/2021a`` ``3.5.1`` | | ``foss/2021b`` ``3.5.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/deepdiff.md b/docs/version-specific/supported-software/d/deepdiff.md index 3aa83b1fe..0ec22b5b9 100644 --- a/docs/version-specific/supported-software/d/deepdiff.md +++ b/docs/version-specific/supported-software/d/deepdiff.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # deepdiff DeepDiff: Deep Difference of dictionaries, iterables and almost any other object recursively. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``5.8.1`` | | ``GCCcore/11.3.0`` ``6.7.1`` | | ``GCCcore/12.2.0`` ``6.7.1`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/deepfold.md b/docs/version-specific/supported-software/d/deepfold.md index 1c356929e..fd6cd9c32 100644 --- a/docs/version-specific/supported-software/d/deepfold.md +++ b/docs/version-specific/supported-software/d/deepfold.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # deepfold This package provides an implementation of DeepFold, a trainable, Transformer-based deep protein folding model. We modified the open-source code of DeepMind AlphaFold v2.0 and Uni-Fold-jax. Pretrained models can be found in environment variable $DEEPFOLD_PARAMETERS @@ -7,3 +11,6 @@ This package provides an implementation of DeepFold, a trainable, Transformer-ba version | versionsuffix | toolchain --------|---------------|---------- ``20240308`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/deepmedic.md b/docs/version-specific/supported-software/d/deepmedic.md index c86a07a84..fdc96f4cb 100644 --- a/docs/version-specific/supported-software/d/deepmedic.md +++ b/docs/version-specific/supported-software/d/deepmedic.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # deepmedic Efficient Multi-Scale 3D Convolutional Neural Network for Segmentation of 3D Medical Scans. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.8.2`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``0.8.2`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/denseweight.md b/docs/version-specific/supported-software/d/denseweight.md index e6d9b2467..1a19de48c 100644 --- a/docs/version-specific/supported-software/d/denseweight.md +++ b/docs/version-specific/supported-software/d/denseweight.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # denseweight This package implements the method for imbalanced regression DenseWeight. The corresponding paper "Density-based weighting for imbalanced regression". The goal of DenseWeight is to allow training machine learning models for regression tasks that emphasize performance for data points with rare target values in comparison to data points with more common target values. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.1.2`` | ``foss/2022a`` ``0.1.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/desktop-file-utils.md b/docs/version-specific/supported-software/d/desktop-file-utils.md index 90d9b2011..0e8190966 100644 --- a/docs/version-specific/supported-software/d/desktop-file-utils.md +++ b/docs/version-specific/supported-software/d/desktop-file-utils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # desktop-file-utils desktop-file-utils contains a few command line utilities for working with desktop entries: * desktop-file-validate: validates a desktop file and prints warnings/errors about desktop entry specification violations. * desktop-file-install: installs a desktop file to the applications directory, optionally munging it a bit in transit. * update-desktop-database: updates the database containing a cache of MIME types handled by desktop files. It requires GLib to compile, because the implementation requires Unicode utilities and such. @@ -7,3 +11,6 @@ desktop-file-utils contains a few command line utilities for working with deskto version | toolchain --------|---------- ``0.27`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/destiny.md b/docs/version-specific/supported-software/d/destiny.md index 5828ddb4a..74c66f5fc 100644 --- a/docs/version-specific/supported-software/d/destiny.md +++ b/docs/version-specific/supported-software/d/destiny.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # destiny R packages to create and plot diffusion maps. @@ -7,3 +11,6 @@ R packages to create and plot diffusion maps. version | versionsuffix | toolchain --------|---------------|---------- ``2.5.6`` | ``-R-3.4.0`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/devbio-napari.md b/docs/version-specific/supported-software/d/devbio-napari.md index c2c5efa45..29763aa99 100644 --- a/docs/version-specific/supported-software/d/devbio-napari.md +++ b/docs/version-specific/supported-software/d/devbio-napari.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # devbio-napari A bundle of napari plugins useful for 3D+t image processing and analysis for studying developmental biology. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.10.1`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.10.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dftd3-lib.md b/docs/version-specific/supported-software/d/dftd3-lib.md index b302ec51c..cd6cffa0c 100644 --- a/docs/version-specific/supported-software/d/dftd3-lib.md +++ b/docs/version-specific/supported-software/d/dftd3-lib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dftd3-lib This is a repackaged version of the DFTD3 program by S. Grimme and his coworkers. The original program (V3.1 Rev 1) was downloaded at 2016-04-03. It has been converted to free format and encapsulated into modules. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.9`` | ``GCC/8.3.0`` ``0.9`` | ``intel-compilers/2021.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dftd4.md b/docs/version-specific/supported-software/d/dftd4.md index bb75c03c4..21866cbf4 100644 --- a/docs/version-specific/supported-software/d/dftd4.md +++ b/docs/version-specific/supported-software/d/dftd4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dftd4 Generally Applicable Atomic-Charge Dependent London Dispersion Correction. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.4.0`` | ``gfbf/2022b`` ``3.4.0`` | ``iimkl/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dialog.md b/docs/version-specific/supported-software/d/dialog.md index bfbc28a26..767eaefcc 100644 --- a/docs/version-specific/supported-software/d/dialog.md +++ b/docs/version-specific/supported-software/d/dialog.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dialog A utility for creating TTY dialog boxes @@ -7,3 +11,6 @@ A utility for creating TTY dialog boxes version | toolchain --------|---------- ``1.3-20231002`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dicom2nifti.md b/docs/version-specific/supported-software/d/dicom2nifti.md index 5e8d8d31c..2c03848b0 100644 --- a/docs/version-specific/supported-software/d/dicom2nifti.md +++ b/docs/version-specific/supported-software/d/dicom2nifti.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dicom2nifti Python library for converting dicom files to nifti @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.2.12`` | ``-Python-3.8.2`` | ``foss/2020a`` ``2.3.0`` | | ``foss/2020b`` ``2.3.0`` | | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dijitso.md b/docs/version-specific/supported-software/d/dijitso.md index c0d3623ae..70a7c72f6 100644 --- a/docs/version-specific/supported-software/d/dijitso.md +++ b/docs/version-specific/supported-software/d/dijitso.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dijitso dijitso is a Python module for distributed just-in-time shared library building. @@ -7,3 +11,6 @@ dijitso is a Python module for distributed just-in-time shared library building. version | versionsuffix | toolchain --------|---------------|---------- ``2019.1.0`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dill.md b/docs/version-specific/supported-software/d/dill.md index 5b0803f8e..a9d2f5b1c 100644 --- a/docs/version-specific/supported-software/d/dill.md +++ b/docs/version-specific/supported-software/d/dill.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dill dill extends python's pickle module for serializing and de-serializing python objects to the majority of the built-in python types. Serialization is the process of converting an object to a byte stream, and the inverse of which is converting a byte stream back to on python object hierarchy. @@ -14,3 +18,6 @@ version | toolchain ``0.3.6`` | ``GCCcore/11.3.0`` ``0.3.7`` | ``GCCcore/12.2.0`` ``0.3.7`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/distributed.md b/docs/version-specific/supported-software/d/distributed.md index 39fb1ff01..aa47bb6b2 100644 --- a/docs/version-specific/supported-software/d/distributed.md +++ b/docs/version-specific/supported-software/d/distributed.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # distributed Dask.distributed is a lightweight library for distributed computing in Python. It extends both the concurrent.futures and dask APIs to moderate sized clusters. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.14.3`` | ``-Python-2.7.12`` | ``intel/2016b`` ``1.14.3`` | ``-Python-3.5.2`` | ``intel/2016b`` ``1.21.6`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dlb.md b/docs/version-specific/supported-software/d/dlb.md index 7aa1d7fdb..9c29043fe 100644 --- a/docs/version-specific/supported-software/d/dlb.md +++ b/docs/version-specific/supported-software/d/dlb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dlb DLB is a dynamic library designed to speed up HPC hybrid applications (i.e., two levels of parallelism) by improving the load balance of the outer level of parallelism (e.g., MPI) by dynamically redistributing the computational resources at the inner level of parallelism (e.g., OpenMP). at run time. @@ -12,3 +16,6 @@ version | toolchain ``3.3.1`` | ``iimpi/2022a`` ``3.4`` | ``gompi/2023b`` ``3.4`` | ``iimpi/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dlib.md b/docs/version-specific/supported-software/d/dlib.md index 047d9563b..5bd89b506 100644 --- a/docs/version-specific/supported-software/d/dlib.md +++ b/docs/version-specific/supported-software/d/dlib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dlib Dlib is a modern C++ toolkit containing machine learning algorithms and tools for creating complex software in C++ to solve real world problems. It is used in both industry and academia in a wide range of domains including robotics, embedded devices, mobile phones, and large high performance computing environments. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``19.22`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``19.22`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dm-haiku.md b/docs/version-specific/supported-software/d/dm-haiku.md index a06378619..18e705194 100644 --- a/docs/version-specific/supported-software/d/dm-haiku.md +++ b/docs/version-specific/supported-software/d/dm-haiku.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dm-haiku Haiku is a simple neural network library for JAX developed by some of the authors of Sonnet, a neural network library for TensorFlow. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.0.9`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``0.0.9`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.0.9`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dm-reverb.md b/docs/version-specific/supported-software/d/dm-reverb.md index 889df94b4..6191902d8 100644 --- a/docs/version-specific/supported-software/d/dm-reverb.md +++ b/docs/version-specific/supported-software/d/dm-reverb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dm-reverb Reverb is an efficient and easy-to-use data storage and transport system designed for machine learning research. Reverb is primarily used as an experience replay system for distributed reinforcement learning algorithms but the system also supports multiple data structure representations such as FIFO, LIFO, and priority queues. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.2.0`` | ``foss/2020b`` ``0.7.0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dm-tree.md b/docs/version-specific/supported-software/d/dm-tree.md index 3624677be..cb9aee877 100644 --- a/docs/version-specific/supported-software/d/dm-tree.md +++ b/docs/version-specific/supported-software/d/dm-tree.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dm-tree dm-tree provides tree, a library for working with nested data structures. In a way, tree generalizes the builtin map function which only supports flat sequences, and allows to apply a function to each "leaf" preserving the overall structure. @@ -12,3 +16,6 @@ version | toolchain ``0.1.6`` | ``GCCcore/11.2.0`` ``0.1.8`` | ``GCCcore/11.3.0`` ``0.1.8`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dominate.md b/docs/version-specific/supported-software/d/dominate.md index d0768e613..0503088f3 100644 --- a/docs/version-specific/supported-software/d/dominate.md +++ b/docs/version-specific/supported-software/d/dominate.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dominate Dominate is a Python library for creating and manipulating HTML documents using an elegant DOM API. It allows you to write HTML pages in pure Python very concisely, which eliminates the need to learn another template language, and lets you take advantage of the more powerful features of Python. @@ -7,3 +11,6 @@ Dominate is a Python library for creating and manipulating HTML documents using version | toolchain --------|---------- ``2.8.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dorado.md b/docs/version-specific/supported-software/d/dorado.md index b6021b77e..6331576d2 100644 --- a/docs/version-specific/supported-software/d/dorado.md +++ b/docs/version-specific/supported-software/d/dorado.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dorado Dorado is a high-performance, easy-to-use, open source basecaller for Oxford Nanopore reads. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.3.1`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.5.1`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.5.3`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dotNET-Core-Runtime.md b/docs/version-specific/supported-software/d/dotNET-Core-Runtime.md index 33c692b6e..f10036bd7 100644 --- a/docs/version-specific/supported-software/d/dotNET-Core-Runtime.md +++ b/docs/version-specific/supported-software/d/dotNET-Core-Runtime.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dotNET-Core-Runtime .NET is a free, cross-platform, open source developer platform for building many different types of applications. @@ -9,3 +13,6 @@ version | toolchain ``2.0.7`` | ``GCCcore/6.4.0`` ``5.0.17`` | ``GCCcore/10.3.0`` ``6.0.1`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dotNET-Core.md b/docs/version-specific/supported-software/d/dotNET-Core.md index c9be1ff3a..75f839cb5 100644 --- a/docs/version-specific/supported-software/d/dotNET-Core.md +++ b/docs/version-specific/supported-software/d/dotNET-Core.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dotNET-Core .NET is a free, cross-platform, open source developer platform for building many different types of applications. With .NET, you can use multiple languages, editors, and libraries to build for web, mobile, desktop, gaming, and IoT. Contains the SDK and the Runtime. @@ -10,3 +14,6 @@ version | toolchain ``6.0`` | ``system`` ``8.0.203`` | ``system`` ``8.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dotNET-SDK.md b/docs/version-specific/supported-software/d/dotNET-SDK.md index fe62e9298..ece55be71 100644 --- a/docs/version-specific/supported-software/d/dotNET-SDK.md +++ b/docs/version-specific/supported-software/d/dotNET-SDK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dotNET-SDK .NET is a free, cross-platform, open source developer platform for building many different types of applications. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.1.300`` | ``-linux-x64`` | ``system`` ``6.0.101`` | ``-linux-x64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/double-conversion.md b/docs/version-specific/supported-software/d/double-conversion.md index 4af796ad5..b831741d1 100644 --- a/docs/version-specific/supported-software/d/double-conversion.md +++ b/docs/version-specific/supported-software/d/double-conversion.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # double-conversion Efficient binary-decimal and decimal-binary conversion routines for IEEE doubles. @@ -17,3 +21,6 @@ version | toolchain ``3.2.1`` | ``GCCcore/12.2.0`` ``3.3.0`` | ``GCCcore/12.3.0`` ``3.3.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/drmaa-python.md b/docs/version-specific/supported-software/d/drmaa-python.md index 09d3dbb2c..2ae793a2e 100644 --- a/docs/version-specific/supported-software/d/drmaa-python.md +++ b/docs/version-specific/supported-software/d/drmaa-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # drmaa-python Distributed Resource Management Application API (DRMAA) bindings for Python. @@ -7,3 +11,6 @@ Distributed Resource Management Application API (DRMAA) bindings for Python. version | versionsuffix | toolchain --------|---------------|---------- ``0.7.9`` | ``-slurm`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dropEst.md b/docs/version-specific/supported-software/d/dropEst.md index d4e166512..b15ed1e71 100644 --- a/docs/version-specific/supported-software/d/dropEst.md +++ b/docs/version-specific/supported-software/d/dropEst.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dropEst Pipeline for initial analysis of droplet-based single-cell RNA-seq data @@ -7,3 +11,6 @@ Pipeline for initial analysis of droplet-based single-cell RNA-seq data version | versionsuffix | toolchain --------|---------------|---------- ``0.7.1`` | ``-R-3.4.3`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dtcmp.md b/docs/version-specific/supported-software/d/dtcmp.md index 73e4f6025..301a173fc 100644 --- a/docs/version-specific/supported-software/d/dtcmp.md +++ b/docs/version-specific/supported-software/d/dtcmp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dtcmp Datatype Compare (DTCMP) Library for sorting and ranking distributed data using MPI @@ -13,3 +17,6 @@ version | toolchain ``1.1.2`` | ``gompi/2020b`` ``1.1.4`` | ``gompi/2022a`` ``1.1.4`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dtcwt.md b/docs/version-specific/supported-software/d/dtcwt.md index 9320f0051..2b71c01ca 100644 --- a/docs/version-specific/supported-software/d/dtcwt.md +++ b/docs/version-specific/supported-software/d/dtcwt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dtcwt Dual-Tree Complex Wavelet Transform library for Python @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.12.0`` | ``-Python-2.7.15`` | ``foss/2018b`` ``0.12.0`` | ``-Python-3.7.4`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dune-core.md b/docs/version-specific/supported-software/d/dune-core.md index db05dbb4d..f90a7bc14 100644 --- a/docs/version-specific/supported-software/d/dune-core.md +++ b/docs/version-specific/supported-software/d/dune-core.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dune-core The Dune core modules build the stable basis of Dune. They follow a consistent release cycle and have high requirements regarding stability and backwards compatibility. These modules build the foundation for higher-level components. @@ -7,3 +11,6 @@ The Dune core modules build the stable basis of Dune. They follow a consistent version | toolchain --------|---------- ``2.8.0.post1`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dune-fem.md b/docs/version-specific/supported-software/d/dune-fem.md index 9482bfeb5..a381c1eb0 100644 --- a/docs/version-specific/supported-software/d/dune-fem.md +++ b/docs/version-specific/supported-software/d/dune-fem.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dune-fem DUNE-FEM is a discretization module based on DUNE containing all the building blocks required to implement efficient solvers for a wide range of (systems of non linear) partial differential equations. DUNE-FEM can also be used through an extensive Python interface which brings all components of DUNE-FEM and the DUNE core modules to Python. @@ -7,3 +11,6 @@ DUNE-FEM is a discretization module based on DUNE containing all the building bl version | toolchain --------|---------- ``2.8.0.6`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/duplex-tools.md b/docs/version-specific/supported-software/d/duplex-tools.md index 44b368a05..8e400cefb 100644 --- a/docs/version-specific/supported-software/d/duplex-tools.md +++ b/docs/version-specific/supported-software/d/duplex-tools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # duplex-tools Duplex Tools contains a set of utilities for dealing with Duplex sequencing data. Tools are provided to identify and prepare duplex pairs for basecalling by Dorado (recommended) and Guppy, and for recovering simplex basecalls from incorrectly concatenated pairs. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.3.1`` | ``foss/2022a`` ``0.3.3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dx-toolkit.md b/docs/version-specific/supported-software/d/dx-toolkit.md index db02b9cc2..441e655ff 100644 --- a/docs/version-specific/supported-software/d/dx-toolkit.md +++ b/docs/version-specific/supported-software/d/dx-toolkit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dx-toolkit The DNAnexus Platform SDK - also called dx-toolkit - includes the dx command-line client; tools for building and debugging apps; utilities for working with DNA data on the DNAnexus Platform; and Python, Java, C++ and R bindings for working on the DNAnexus Platform. @@ -7,3 +11,6 @@ The DNAnexus Platform SDK - also called dx-toolkit - includes the dx command-lin version | toolchain --------|---------- ``0.350.1`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dxpy.md b/docs/version-specific/supported-software/d/dxpy.md index d2f6cec44..61b9d280c 100644 --- a/docs/version-specific/supported-software/d/dxpy.md +++ b/docs/version-specific/supported-software/d/dxpy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dxpy DNAnexus Platform API bindings for Python @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.266.1`` | ``-Python-2.7.14`` | ``intel/2018a`` ``0.345.0`` | | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/dynesty.md b/docs/version-specific/supported-software/d/dynesty.md index 78d1bfaac..0dd87eb3a 100644 --- a/docs/version-specific/supported-software/d/dynesty.md +++ b/docs/version-specific/supported-software/d/dynesty.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # dynesty dynesty is a Pure Python, MIT-licensed Dynamic Nested Sampling package for estimating Bayesian posteriors and evidences. @@ -7,3 +11,6 @@ dynesty is a Pure Python, MIT-licensed Dynamic Nested Sampling package for estim version | toolchain --------|---------- ``2.1.3`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/d/index.md b/docs/version-specific/supported-software/d/index.md index f28d681ad..48050e8e9 100644 --- a/docs/version-specific/supported-software/d/index.md +++ b/docs/version-specific/supported-software/d/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (d) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - *d* - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [dadi](dadi.md) * [dagitty](dagitty.md) * [Dakota](Dakota.md) diff --git a/docs/version-specific/supported-software/e/E-ANTIC.md b/docs/version-specific/supported-software/e/E-ANTIC.md index b6d7038ba..d1e247860 100644 --- a/docs/version-specific/supported-software/e/E-ANTIC.md +++ b/docs/version-specific/supported-software/e/E-ANTIC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # E-ANTIC E-ANTIC is a C/C++ library to deal with real embedded number fields built on top of ANTIC (https://github.com/wbhart/antic). Its aim is to have as fast as possible exact arithmetic operations and comparisons. @@ -10,3 +14,6 @@ version | toolchain ``0.1.5`` | ``GCC/8.3.0`` ``1.3.0`` | ``gfbf/2022a`` ``2.0.2`` | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ECL.md b/docs/version-specific/supported-software/e/ECL.md index a27cebf56..a5729ac80 100644 --- a/docs/version-specific/supported-software/e/ECL.md +++ b/docs/version-specific/supported-software/e/ECL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ECL ECL (Embeddable Common-Lisp) is an interpreter of the Common-Lisp language as described in the X3J13 Ansi specification, featuring CLOS (Common-Lisp Object System), conditions, loops, etc, plus a translator to C, which can produce standalone executables. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``23.9.9`` | ``GCCcore/11.3.0`` ``24.5.10`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ED2.md b/docs/version-specific/supported-software/e/ED2.md index 4f039f774..6ccb26756 100644 --- a/docs/version-specific/supported-software/e/ED2.md +++ b/docs/version-specific/supported-software/e/ED2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ED2 The Ecosystem Demography Biosphere Model (ED2) is an integrated terrestrial biosphere model incorporating hydrology, land-surface biophysics, vegetation dynamics, and soil carbon and nitrogen biogeochemistry @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``20170201`` | ``-serial`` | ``intel/2017a`` ``20170201`` | | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EDirect.md b/docs/version-specific/supported-software/e/EDirect.md index 50cbcaa39..d3286b749 100644 --- a/docs/version-specific/supported-software/e/EDirect.md +++ b/docs/version-specific/supported-software/e/EDirect.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EDirect Entrez Direct (EDirect) provides access to the NCBI's suite of interconnected databases from a Unix terminal window. Search terms are entered as command-line arguments. Individual operations are connected with Unix pipes to construct multi-step queries. Selected records can then be retrieved in a variety of formats. @@ -9,3 +13,6 @@ version | toolchain ``19.7.20230531`` | ``GCCcore/10.3.0`` ``20.5.20231006`` | ``GCCcore/12.2.0`` ``20.5.20231006`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EGTtools.md b/docs/version-specific/supported-software/e/EGTtools.md index a71aa08da..f9b1ecfc9 100644 --- a/docs/version-specific/supported-software/e/EGTtools.md +++ b/docs/version-specific/supported-software/e/EGTtools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EGTtools EGTtools provides a centralized repository with analytical and numerical methods to study/model game theoretical problems under the Evolutionary Game Theory (EGT) framework. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.1.10.dev2`` | ``foss/2021b`` ``0.1.11`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EIGENSOFT.md b/docs/version-specific/supported-software/e/EIGENSOFT.md index 76999839a..d91868761 100644 --- a/docs/version-specific/supported-software/e/EIGENSOFT.md +++ b/docs/version-specific/supported-software/e/EIGENSOFT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EIGENSOFT The EIGENSOFT package combines functionality from our population genetics methods (Patterson et al. 2006) and our EIGENSTRAT stratification correction method (Price et al. 2006). The EIGENSTRAT method uses principal components analysis to explicitly model ancestry differences between cases and controls along continuous axes of variation; the resulting correction is specific to a candidate marker’s variation in frequency across ancestral populations, minimizing spurious associations while maximizing power to detect true associations. The EIGENSOFT package has a built-in plotting script and supports multiple file formats and quantitative phenotypes. @@ -15,3 +19,6 @@ version | toolchain ``7.2.1`` | ``foss/2020b`` ``7.2.1`` | ``foss/2021a`` ``7.2.1`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ELFIO.md b/docs/version-specific/supported-software/e/ELFIO.md index f6ae53414..8282216e2 100644 --- a/docs/version-specific/supported-software/e/ELFIO.md +++ b/docs/version-specific/supported-software/e/ELFIO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ELFIO ELFIO is a header-only C++ library intended for reading and generating files in the ELF binary format. @@ -7,3 +11,6 @@ ELFIO is a header-only C++ library intended for reading and generating files in version | toolchain --------|---------- ``3.9`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ELPA.md b/docs/version-specific/supported-software/e/ELPA.md index 3504940ff..5d2bd7fe4 100644 --- a/docs/version-specific/supported-software/e/ELPA.md +++ b/docs/version-specific/supported-software/e/ELPA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ELPA Eigenvalue SoLvers for Petaflop-Applications . @@ -47,3 +51,6 @@ version | versionsuffix | toolchain ``2023.05.001`` | | ``intel/2023a`` ``2023.11.001`` | | ``foss/2023b`` ``2023.11.001`` | | ``intel/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ELPH.md b/docs/version-specific/supported-software/e/ELPH.md index fd9dd8127..5003ab6ca 100644 --- a/docs/version-specific/supported-software/e/ELPH.md +++ b/docs/version-specific/supported-software/e/ELPH.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ELPH ELPH is a general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences. The program takes as input a set containing anywhere from a few dozen to thousands of sequences, and searches through them for the most common motif, assuming that each sequence contains one copy of the motif. We have used ELPH to find patterns such as ribosome binding sites (RBSs) and exon splicing enhancers (ESEs). @@ -7,3 +11,6 @@ ELPH is a general-purpose Gibbs sampler for finding motifs in a set of DNA or version | toolchain --------|---------- ``1.0.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ELSI-RCI.md b/docs/version-specific/supported-software/e/ELSI-RCI.md index 497d0df5f..9c8addb27 100644 --- a/docs/version-specific/supported-software/e/ELSI-RCI.md +++ b/docs/version-specific/supported-software/e/ELSI-RCI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ELSI-RCI ELSI-RCI provides and enhances open-source software packages which iteratively solve or circumvent eigenvalue problems in self-consistent field calculations based on the Kohn-Sham density-functional theory. @@ -12,3 +16,6 @@ version | toolchain ``0.1.0`` | ``intel/2020b`` ``0.1.0`` | ``intel-compilers/2021.2.0`` ``0.1.0`` | ``intel-compilers/2021.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ELSI.md b/docs/version-specific/supported-software/e/ELSI.md index 7a5bc8fb4..788a2d860 100644 --- a/docs/version-specific/supported-software/e/ELSI.md +++ b/docs/version-specific/supported-software/e/ELSI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ELSI ELSI provides and enhances scalable, open-source software library solutions for electronic structure calculations in materials science, condensed matter physics, chemistry, and many other fields. ELSI focuses on methods that solve or circumvent eigenvalue problems in electronic structure theory. The ELSI infrastructure should also be useful for other challenging eigenvalue problems. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``2.6.4`` | ``-PEXSI`` | ``intel/2020b`` ``2.7.1`` | ``-PEXSI`` | ``foss/2021a`` ``2.7.1`` | ``-PEXSI`` | ``intel/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EMAN2.md b/docs/version-specific/supported-software/e/EMAN2.md index fcdf5d48f..f8285b857 100644 --- a/docs/version-specific/supported-software/e/EMAN2.md +++ b/docs/version-specific/supported-software/e/EMAN2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EMAN2 EMAN2 is the successor to EMAN1. It is a broadly based greyscale scientific image processing suite with a primary focus on processing data from transmission electron microscopes. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.3`` | ``-Python-2.7.15`` | ``foss/2019a`` ``2.3`` | ``-Python-2.7.15`` | ``fosscuda/2019a`` ``2.3`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EMBOSS.md b/docs/version-specific/supported-software/e/EMBOSS.md index 676b88ead..063140fa3 100644 --- a/docs/version-specific/supported-software/e/EMBOSS.md +++ b/docs/version-specific/supported-software/e/EMBOSS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EMBOSS EMBOSS is 'The European Molecular Biology Open Software Suite' . EMBOSS is a free Open Source software analysis package specially developed for the needs of the molecular biology (e.g. EMBnet) user community. @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``6.6.0`` | ``-X11-20170314`` | ``intel/2017a`` ``6.6.0`` | | ``intel/2017a`` ``6.6.0`` | | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EMU.md b/docs/version-specific/supported-software/e/EMU.md index 830b33471..c771d0bb1 100644 --- a/docs/version-specific/supported-software/e/EMU.md +++ b/docs/version-specific/supported-software/e/EMU.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EMU EMU infers population structure in the presence of missingness and works for both haploid, psuedo-haploid and diploid genotype datasets @@ -7,3 +11,6 @@ EMU infers population structure in the presence of missingness and works for bot version | versionsuffix | toolchain --------|---------------|---------- ``0.66`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EPD.md b/docs/version-specific/supported-software/e/EPD.md index 9237fc54a..424c2021f 100644 --- a/docs/version-specific/supported-software/e/EPD.md +++ b/docs/version-specific/supported-software/e/EPD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EPD The Enthought Python Distribution provides scientists with a comprehensive set of tools to perform rigorous data analysis and visualization. Python, distinguished by its flexibility, coherence, and ease-of-use, is rapidly becoming the programming language of choice for researchers worldwide. EPD extends this capacity with a powerful collection of Python libraries to enable interactive technical computing and cross-platform rapid application development. @@ -7,3 +11,6 @@ The Enthought Python Distribution provides scientists with a comprehensive set o version | toolchain --------|---------- ``7.3-2-rh5`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EPIC.md b/docs/version-specific/supported-software/e/EPIC.md index 7212bc60a..9659496cd 100644 --- a/docs/version-specific/supported-software/e/EPIC.md +++ b/docs/version-specific/supported-software/e/EPIC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EPIC Package implementing EPIC method to estimate the proportion of immune, stromal, endothelial and cancer or other cells from bulk gene expression data. @@ -7,3 +11,6 @@ Package implementing EPIC method to estimate the proportion of immune, stromal, version | versionsuffix | toolchain --------|---------------|---------- ``1.1`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ESL-Bundle.md b/docs/version-specific/supported-software/e/ESL-Bundle.md index 30447826e..104e62344 100644 --- a/docs/version-specific/supported-software/e/ESL-Bundle.md +++ b/docs/version-specific/supported-software/e/ESL-Bundle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ESL-Bundle The ESL Bundle is a collection of libraries and utilities broadly used in electronic structure calculations, put together to make their use easier by researchers and scientific software developers. ESL stands for Electronic Structure Library, an initiative which distributes quality software and promotes open standards for high-performance computing applications in the field of electronic structure calculations. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.6.1`` | ``foss/2020b`` ``0.6.1`` | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ESM-2.md b/docs/version-specific/supported-software/e/ESM-2.md index c3a96f74d..c6cd3ea49 100644 --- a/docs/version-specific/supported-software/e/ESM-2.md +++ b/docs/version-specific/supported-software/e/ESM-2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ESM-2 ESM-2 outperforms all tested single-sequence protein language models across a range of structure prediction tasks. ESMFold harnesses the ESM-2 language model to generate accurate structure predictions end to end directly from the sequence of a protein. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.0.0`` | | ``foss/2021a`` ``2.0.0`` | | ``foss/2022b`` ``2.0.0`` | ``-CUDA-12.1.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ESMF.md b/docs/version-specific/supported-software/e/ESMF.md index d6eb20ef0..9bbdd3873 100644 --- a/docs/version-specific/supported-software/e/ESMF.md +++ b/docs/version-specific/supported-software/e/ESMF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ESMF The Earth System Modeling Framework (ESMF) is software for building and coupling weather, climate, and related models. @@ -28,3 +32,6 @@ version | versionsuffix | toolchain ``8.3.0`` | | ``foss/2022a`` ``8.3.0`` | | ``intel/2022a`` ``8.4.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ESMPy.md b/docs/version-specific/supported-software/e/ESMPy.md index a1fef9276..a9472c4f1 100644 --- a/docs/version-specific/supported-software/e/ESMPy.md +++ b/docs/version-specific/supported-software/e/ESMPy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ESMPy Earth System Modeling Framework (ESMF) Python Interface @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``8.0.0`` | ``-Python-3.7.4`` | ``intel/2019b`` ``8.0.1`` | ``-Python-3.8.2`` | ``foss/2020a`` ``8.0.1`` | | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ESMValTool.md b/docs/version-specific/supported-software/e/ESMValTool.md index 80b4523ef..eef467718 100644 --- a/docs/version-specific/supported-software/e/ESMValTool.md +++ b/docs/version-specific/supported-software/e/ESMValTool.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ESMValTool The Earth System Model eValuation Tool (ESMValTool) is a community diagnostics and performance metrics tool for the evaluation of Earth System Models (ESMs) that allows for routine comparison of single or multiple models, either against predecessor versions or against observations. @@ -7,3 +11,6 @@ The Earth System Model eValuation Tool (ESMValTool) is a community diagnostics version | versionsuffix | toolchain --------|---------------|---------- ``1.1.0`` | ``-Python-2.7.14`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ESPResSo.md b/docs/version-specific/supported-software/e/ESPResSo.md index bb0a2a330..2f2c583fc 100644 --- a/docs/version-specific/supported-software/e/ESPResSo.md +++ b/docs/version-specific/supported-software/e/ESPResSo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ESPResSo A software package for performing and analyzing scientific Molecular Dynamics simulations. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``4.2.1`` | | ``foss/2022a`` ``4.2.1`` | | ``foss/2023a`` ``4.2.2`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ETE.md b/docs/version-specific/supported-software/e/ETE.md index a0ec47dc4..758d29c6c 100644 --- a/docs/version-specific/supported-software/e/ETE.md +++ b/docs/version-specific/supported-software/e/ETE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ETE A Python framework for the analysis and visualization of trees @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``3.1.2`` | | ``foss/2021b`` ``3.1.3`` | | ``foss/2022b`` ``3.1.3`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ETSF_IO.md b/docs/version-specific/supported-software/e/ETSF_IO.md index b8753c1a4..cdb56107d 100644 --- a/docs/version-specific/supported-software/e/ETSF_IO.md +++ b/docs/version-specific/supported-software/e/ETSF_IO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ETSF_IO A library of F90 routines to read/write the ETSF file format has been written. It is called ETSF_IO and available under LGPL. @@ -12,3 +16,6 @@ version | toolchain ``1.0.4`` | ``intel/2017b`` ``1.0.4`` | ``intel/2018a`` ``1.0.4`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EUKulele.md b/docs/version-specific/supported-software/e/EUKulele.md index 897a7db01..e69e3d277 100644 --- a/docs/version-specific/supported-software/e/EUKulele.md +++ b/docs/version-specific/supported-software/e/EUKulele.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EUKulele Formalizing environmental eukaryotic taxonomic assignment @@ -7,3 +11,6 @@ Formalizing environmental eukaryotic taxonomic assignment version | toolchain --------|---------- ``2.0.6`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EVcouplings.md b/docs/version-specific/supported-software/e/EVcouplings.md index ffa7f533f..ea403cdee 100644 --- a/docs/version-specific/supported-software/e/EVcouplings.md +++ b/docs/version-specific/supported-software/e/EVcouplings.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EVcouplings Predict protein structure, function and mutations using evolutionary sequence covariation. @@ -7,3 +11,6 @@ Predict protein structure, function and mutations using evolutionary sequence co version | toolchain --------|---------- ``0.1.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EZC3D.md b/docs/version-specific/supported-software/e/EZC3D.md index 3d020e029..406026a34 100644 --- a/docs/version-specific/supported-software/e/EZC3D.md +++ b/docs/version-specific/supported-software/e/EZC3D.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EZC3D EZC3D is an easy to use reader, modifier and writer for C3D format files. It is written en C++ with proper binders for Python and MATLAB/Octave scripting langages. @@ -7,3 +11,6 @@ EZC3D is an easy to use reader, modifier and writer for C3D format files. It is version | toolchain --------|---------- ``1.5.2`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EasyBuild.md b/docs/version-specific/supported-software/e/EasyBuild.md index 47cd9bb77..9aecf747a 100644 --- a/docs/version-specific/supported-software/e/EasyBuild.md +++ b/docs/version-specific/supported-software/e/EasyBuild.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EasyBuild EasyBuild is a software build and installation framework written in Python that allows you to install software in a structured, repeatable and robust way. @@ -107,3 +111,6 @@ version | toolchain ``4.8.2`` | ``system`` ``4.9.0`` | ``system`` ``4.9.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EasyMocap.md b/docs/version-specific/supported-software/e/EasyMocap.md index b0ee8479c..2acd20821 100644 --- a/docs/version-specific/supported-software/e/EasyMocap.md +++ b/docs/version-specific/supported-software/e/EasyMocap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EasyMocap EasyMoCap is an open-source toolbox designed for markerless human motion capture from RGB videos. This project offers a wide range of motion capture methods across various settings. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.2`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EasyQC.md b/docs/version-specific/supported-software/e/EasyQC.md index db2fb8e6a..7a22ae97a 100644 --- a/docs/version-specific/supported-software/e/EasyQC.md +++ b/docs/version-specific/supported-software/e/EasyQC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EasyQC EasyQC is an R-package that provides advanced functionality to (1) perform file-level QC of single genome-wide association (GWA) data-sets (2) conduct quality control across several GWA data-sets (meta-level QC) (3) simplify data-handling of large-scale GWA data-sets. @@ -7,3 +11,6 @@ EasyQC is an R-package that provides advanced functionality to (1) perform file version | versionsuffix | toolchain --------|---------------|---------- ``9.2`` | ``-R-3.3.1`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EggLib.md b/docs/version-specific/supported-software/e/EggLib.md index a14089b08..bf110abb6 100644 --- a/docs/version-specific/supported-software/e/EggLib.md +++ b/docs/version-specific/supported-software/e/EggLib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EggLib EggLib is a C++/Python library and program package for evolutionary genetics and genomics. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.1.10`` | ``intel/2016a`` ``3.3.0`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/Eigen.md b/docs/version-specific/supported-software/e/Eigen.md index 866c94648..c7bdd42b1 100644 --- a/docs/version-specific/supported-software/e/Eigen.md +++ b/docs/version-specific/supported-software/e/Eigen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Eigen Eigen is a C++ template library for linear algebra: matrices, vectors, numerical solvers, and related algorithms. @@ -37,3 +41,6 @@ version | toolchain ``3.4.0`` | ``GCCcore/12.3.0`` ``3.4.0`` | ``GCCcore/13.2.0`` ``3.4.0`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EigenExa.md b/docs/version-specific/supported-software/e/EigenExa.md index 58372193d..13ade5a8c 100644 --- a/docs/version-specific/supported-software/e/EigenExa.md +++ b/docs/version-specific/supported-software/e/EigenExa.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EigenExa EigenExa, a part of KMATHLIB, is a high performance eigen-solver. @@ -7,3 +11,6 @@ EigenExa, a part of KMATHLIB, is a high performance eigen-solver. version | toolchain --------|---------- ``2.11`` | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/Elk.md b/docs/version-specific/supported-software/e/Elk.md index 179490050..cfcd8c586 100644 --- a/docs/version-specific/supported-software/e/Elk.md +++ b/docs/version-specific/supported-software/e/Elk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Elk An all-electron full-potential linearised augmented-plane wave (FP-LAPW) code with many advanced features. Written originally at Karl-Franzens-Universität Graz as a milestone of the EXCITING EU Research and Training Network, the code is designed to be as simple as possible so that new developments in the field of density functional theory (DFT) can be added quickly and reliably. @@ -12,3 +16,6 @@ version | toolchain ``7.0.12`` | ``foss/2020b`` ``7.2.42`` | ``foss/2021a`` ``8.5.2`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/Elmer.md b/docs/version-specific/supported-software/e/Elmer.md index 583635af1..9e59f1dda 100644 --- a/docs/version-specific/supported-software/e/Elmer.md +++ b/docs/version-specific/supported-software/e/Elmer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Elmer Elmer is an open source multiphysical simulation software mainly developed by CSC - IT Center for Science (CSC). Elmer includes physical models of fluid dynamics, structural mechanics, electromagnetics, heat transfer and acoustics, for example. These are described by partial differential equations which Elmer solves by the Finite Element Method (FEM). @@ -7,3 +11,6 @@ Elmer is an open source multiphysical simulation software mainly developed by C version | toolchain --------|---------- ``9.0`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/Emacs.md b/docs/version-specific/supported-software/e/Emacs.md index 5c3cf443b..db3dfae40 100644 --- a/docs/version-specific/supported-software/e/Emacs.md +++ b/docs/version-specific/supported-software/e/Emacs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Emacs GNU Emacs is an extensible, customizable text editor—and more. At its core is an interpreter for Emacs Lisp, a dialect of the Lisp programming language with extensions to support text editing. @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``27.2`` | | ``GCCcore/11.2.0`` ``28.1`` | | ``GCCcore/10.2.0`` ``28.2`` | | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/Embree.md b/docs/version-specific/supported-software/e/Embree.md index de59f05bd..aa6182ae0 100644 --- a/docs/version-specific/supported-software/e/Embree.md +++ b/docs/version-specific/supported-software/e/Embree.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Embree High Performance Ray Tracing Kernels @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.13.4`` | ``system`` ``3.4.0`` | ``iccifort/2018.1.163-GCC-6.4.0-2.28`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EnergyPlus.md b/docs/version-specific/supported-software/e/EnergyPlus.md index d97fc74c3..a0ca3570a 100644 --- a/docs/version-specific/supported-software/e/EnergyPlus.md +++ b/docs/version-specific/supported-software/e/EnergyPlus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EnergyPlus EnergyPlus is a whole building energy simulation program that engineers, architects, and researchers use to model both energy consumption—for heating, cooling, ventilation, lighting and plug and process loads—and water use in buildings. @@ -7,3 +11,6 @@ EnergyPlus is a whole building energy simulation program that engineers, archite version | toolchain --------|---------- ``23.2.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EnsEMBLCoreAPI.md b/docs/version-specific/supported-software/e/EnsEMBLCoreAPI.md index 1c7170889..c36cbf4da 100644 --- a/docs/version-specific/supported-software/e/EnsEMBLCoreAPI.md +++ b/docs/version-specific/supported-software/e/EnsEMBLCoreAPI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EnsEMBLCoreAPI The Ensembl Core Perl API and SQL schema @@ -7,3 +11,6 @@ The Ensembl Core Perl API and SQL schema version | versionsuffix | toolchain --------|---------------|---------- ``96.0-r20190601`` | ``-Perl-5.28.1`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EpiSCORE.md b/docs/version-specific/supported-software/e/EpiSCORE.md index afaaf8030..54ce7fea3 100644 --- a/docs/version-specific/supported-software/e/EpiSCORE.md +++ b/docs/version-specific/supported-software/e/EpiSCORE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EpiSCORE Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles @@ -7,3 +11,6 @@ Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles version | versionsuffix | toolchain --------|---------------|---------- ``0.9.5-20220621`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EricScript.md b/docs/version-specific/supported-software/e/EricScript.md index c9030ebac..3a7459054 100644 --- a/docs/version-specific/supported-software/e/EricScript.md +++ b/docs/version-specific/supported-software/e/EricScript.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EricScript EricScript is a computational framework for the discovery of gene fusions in paired end RNA-seq data. @@ -7,3 +11,6 @@ EricScript is a computational framework for the discovery of gene fusions in pai version | versionsuffix | toolchain --------|---------------|---------- ``0.5.5`` | ``-R-3.4.0`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/Essentia.md b/docs/version-specific/supported-software/e/Essentia.md index 68ac9a586..31116642c 100644 --- a/docs/version-specific/supported-software/e/Essentia.md +++ b/docs/version-specific/supported-software/e/Essentia.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Essentia Open-source library and tools for audio and music analysis, description and synthesis @@ -7,3 +11,6 @@ Open-source library and tools for audio and music analysis, description and synt version | versionsuffix | toolchain --------|---------------|---------- ``2.1_beta5`` | ``-Python-2.7.15`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/Evcxr-REPL.md b/docs/version-specific/supported-software/e/Evcxr-REPL.md index 84225b2c7..2a9084def 100644 --- a/docs/version-specific/supported-software/e/Evcxr-REPL.md +++ b/docs/version-specific/supported-software/e/Evcxr-REPL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Evcxr-REPL A Rust REPL (Read-Eval-Print loop) built using the evcxr evaluation context. @@ -7,3 +11,6 @@ A Rust REPL (Read-Eval-Print loop) built using the evcxr evaluation context. version | versionsuffix | toolchain --------|---------------|---------- ``0.14.2`` | ``-Rust-1.65.0`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EveryBeam.md b/docs/version-specific/supported-software/e/EveryBeam.md index 856eb1aae..261cf7dc0 100644 --- a/docs/version-specific/supported-software/e/EveryBeam.md +++ b/docs/version-specific/supported-software/e/EveryBeam.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EveryBeam Library that provides the antenna response pattern for several instruments, such as LOFAR (and LOBES), SKA (OSKAR), MWA, JVLA, etc. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.5.2`` | ``foss/2022a`` ``0.5.2`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/EvidentialGene.md b/docs/version-specific/supported-software/e/EvidentialGene.md index eb3f8ded5..bff5cce20 100644 --- a/docs/version-specific/supported-software/e/EvidentialGene.md +++ b/docs/version-specific/supported-software/e/EvidentialGene.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # EvidentialGene EvidentialGene is a genome informatics project for "Evidence Directed Gene Construction for Eukaryotes", for constructing high quality, accurate gene sets for animals and plants (any eukaryotes), being developed by Don Gilbert at Indiana University, gilbertd at indiana edu. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2018.01.01`` | ``-Perl-5.24.1`` | ``intel/2017a`` ``2022.01.14`` | | ``gompi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ExaBayes.md b/docs/version-specific/supported-software/e/ExaBayes.md index 624f622a3..81a5baea2 100644 --- a/docs/version-specific/supported-software/e/ExaBayes.md +++ b/docs/version-specific/supported-software/e/ExaBayes.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ExaBayes ExaBayes is a software package for Bayesian tree inference. It is particularly suitable for large-scale analyses on computer clusters @@ -7,3 +11,6 @@ ExaBayes is a software package for Bayesian tree inference. It is particularly version | toolchain --------|---------- ``1.5`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ExaML.md b/docs/version-specific/supported-software/e/ExaML.md index 7da6767fd..d11f9426e 100644 --- a/docs/version-specific/supported-software/e/ExaML.md +++ b/docs/version-specific/supported-software/e/ExaML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ExaML Exascale Maximum Likelihood (ExaML) code for phylogenetic inference using MPI @@ -7,3 +11,6 @@ Exascale Maximum Likelihood (ExaML) code for phylogenetic inference using MPI version | versionsuffix | toolchain --------|---------------|---------- ``3.0.22`` | ``-hybrid-avx`` | ``gompi/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/Excel-Writer-XLSX.md b/docs/version-specific/supported-software/e/Excel-Writer-XLSX.md index 21ddb2e28..52eb60f4a 100644 --- a/docs/version-specific/supported-software/e/Excel-Writer-XLSX.md +++ b/docs/version-specific/supported-software/e/Excel-Writer-XLSX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Excel-Writer-XLSX The Excel::Writer::XLSX module can be used to create an Excel file in the 2007+ XLSX format. Multiple worksheets can be added to a workbook and formatting can be applied to cells. Text, numbers, and formulas can be written to the cells. @@ -7,3 +11,6 @@ The Excel::Writer::XLSX module can be used to create an Excel file in the 2007+ version | toolchain --------|---------- ``1.09`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ExifTool.md b/docs/version-specific/supported-software/e/ExifTool.md index 956f5fb5d..66bc7bb16 100644 --- a/docs/version-specific/supported-software/e/ExifTool.md +++ b/docs/version-specific/supported-software/e/ExifTool.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ExifTool Perl module (Image::ExifTool) and program (exiftool) to read EXIF information from images @@ -7,3 +11,6 @@ Perl module (Image::ExifTool) and program (exiftool) to read EXIF information f version | toolchain --------|---------- ``12.00`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/Exonerate.md b/docs/version-specific/supported-software/e/Exonerate.md index 2d13682d7..c1584cfa2 100644 --- a/docs/version-specific/supported-software/e/Exonerate.md +++ b/docs/version-specific/supported-software/e/Exonerate.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Exonerate Exonerate is a generic tool for pairwise sequence comparison. It allows you to align sequences using a many alignment models, using either exhaustive dynamic programming, or a variety of heuristics. @@ -19,3 +23,6 @@ version | toolchain ``2.4.0`` | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` ``2.4.0`` | ``iccifort/2019.5.281`` ``2.4.0`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ExpressBetaDiversity.md b/docs/version-specific/supported-software/e/ExpressBetaDiversity.md index ae9572830..e43f6485a 100644 --- a/docs/version-specific/supported-software/e/ExpressBetaDiversity.md +++ b/docs/version-specific/supported-software/e/ExpressBetaDiversity.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ExpressBetaDiversity Taxon- and phylogenetic-based beta diversity measures. @@ -7,3 +11,6 @@ Taxon- and phylogenetic-based beta diversity measures. version | toolchain --------|---------- ``1.0.10`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/Extrae.md b/docs/version-specific/supported-software/e/Extrae.md index 597b13c41..f56e86382 100644 --- a/docs/version-specific/supported-software/e/Extrae.md +++ b/docs/version-specific/supported-software/e/Extrae.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Extrae Extrae is the core instrumentation package developed by the Performance Tools group at BSC. Extrae is capable of instrumenting applications based on MPI, OpenMP, pthreads, CUDA1, OpenCL1, and StarSs1 using different instrumentation approaches. The information gathered by Extrae typically includes timestamped events of runtime calls, performance counters and source code references. Besides, Extrae provides its own API to allow the user to manually instrument his or her application. @@ -11,3 +15,6 @@ version | toolchain ``3.8.0`` | ``gompi/2020b`` ``3.8.3`` | ``gompi/2021a`` ``4.0.4`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ExtremeLy.md b/docs/version-specific/supported-software/e/ExtremeLy.md index 5fdf7c1e7..3f117a09a 100644 --- a/docs/version-specific/supported-software/e/ExtremeLy.md +++ b/docs/version-specific/supported-software/e/ExtremeLy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ExtremeLy A python package for Extreme Value Analysis. @@ -7,3 +11,6 @@ A python package for Extreme Value Analysis. version | toolchain --------|---------- ``2.3.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/e3nn.md b/docs/version-specific/supported-software/e/e3nn.md index a4a869c25..ff4e7cb8e 100644 --- a/docs/version-specific/supported-software/e/e3nn.md +++ b/docs/version-specific/supported-software/e/e3nn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # e3nn Euclidean neural networks (e3nn) is a python library based on pytorch to create equivariant neural networks for the group O(3). @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.3.3`` | ``-PyTorch-1.13.1-CUDA-11.7.0`` | ``foss/2022a`` ``0.3.3`` | | ``foss/2022a`` ``0.3.3`` | ``-CUDA-12.1.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/eQuilibrator.md b/docs/version-specific/supported-software/e/eQuilibrator.md index 241a600fa..85b5d8f00 100644 --- a/docs/version-specific/supported-software/e/eQuilibrator.md +++ b/docs/version-specific/supported-software/e/eQuilibrator.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # eQuilibrator Calculation of standard thermodynamic potentials of biochemical reactions. @@ -7,3 +11,6 @@ Calculation of standard thermodynamic potentials of biochemical reactions. version | toolchain --------|---------- ``0.4.7`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/eSpeak-NG.md b/docs/version-specific/supported-software/e/eSpeak-NG.md index dc8a40c3b..ce624183e 100644 --- a/docs/version-specific/supported-software/e/eSpeak-NG.md +++ b/docs/version-specific/supported-software/e/eSpeak-NG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # eSpeak-NG The eSpeak NG is a compact open source software text-to-speech synthesizer for Linux, Windows, Android and other operating systems. It supports more than 100 languages and accents. It is based on the eSpeak engine created by Jonathan Duddington. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.50`` | ``gompi/2020a`` ``1.51`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/eXpress.md b/docs/version-specific/supported-software/e/eXpress.md index 0bc9542e6..09ae27bec 100644 --- a/docs/version-specific/supported-software/e/eXpress.md +++ b/docs/version-specific/supported-software/e/eXpress.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # eXpress Streaming quantification for high-throughput sequencing @@ -7,3 +11,6 @@ Streaming quantification for high-throughput sequencing version | toolchain --------|---------- ``1.5.1`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ea-utils.md b/docs/version-specific/supported-software/e/ea-utils.md index d862f07fa..baddcf341 100644 --- a/docs/version-specific/supported-software/e/ea-utils.md +++ b/docs/version-specific/supported-software/e/ea-utils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ea-utils Command-line tools for processing biological sequencing data. Barcode demultiplexing, adapter trimming, etc. Primarily written to support an Illumina based pipeline - but should work with any FASTQs. @@ -9,3 +13,6 @@ version | toolchain ``1.04.807`` | ``foss/2016a`` ``1.04.807`` | ``foss/2016b`` ``1.04.807`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/earthengine-api.md b/docs/version-specific/supported-software/e/earthengine-api.md index d386a7f4a..412c118c3 100644 --- a/docs/version-specific/supported-software/e/earthengine-api.md +++ b/docs/version-specific/supported-software/e/earthengine-api.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # earthengine-api Python and JavaScript bindings for calling the Earth Engine API @@ -7,3 +11,6 @@ Python and JavaScript bindings for calling the Earth Engine API version | versionsuffix | toolchain --------|---------------|---------- ``0.1.143`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/easel.md b/docs/version-specific/supported-software/e/easel.md index 9890700e0..fee45e4ed 100644 --- a/docs/version-specific/supported-software/e/easel.md +++ b/docs/version-specific/supported-software/e/easel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # easel Easel supports computational analysis of biological sequences using probabilistic models. @@ -7,3 +11,6 @@ Easel supports computational analysis of biological sequences using probabilisti version | toolchain --------|---------- ``0.48`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ebGSEA.md b/docs/version-specific/supported-software/e/ebGSEA.md index c92a9fb9c..dfe74ac69 100644 --- a/docs/version-specific/supported-software/e/ebGSEA.md +++ b/docs/version-specific/supported-software/e/ebGSEA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ebGSEA Gene Set Enrichment Analysis is one of the most common tasks in the analysis of omic data, and is critical for biological interpretation. In the context of Epigenome Wide Association Studies (EWAS), which typically rank individual cytosines according to the level of differential methylation, enrichment analysis of biological pathways is challenging due to differences in CpG/probe density between genes. @@ -7,3 +11,6 @@ Gene Set Enrichment Analysis is one of the most common tasks in the analysis of version | versionsuffix | toolchain --------|---------------|---------- ``0.1.0`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ecBuild.md b/docs/version-specific/supported-software/e/ecBuild.md index 4f65546d1..7773eb370 100644 --- a/docs/version-specific/supported-software/e/ecBuild.md +++ b/docs/version-specific/supported-software/e/ecBuild.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ecBuild A CMake-based build system, consisting of a collection of CMake macros and functions that ease the managing of software build systems @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.7.0`` | ``system`` ``3.8.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ecCodes.md b/docs/version-specific/supported-software/e/ecCodes.md index aee20d331..3a529e78f 100644 --- a/docs/version-specific/supported-software/e/ecCodes.md +++ b/docs/version-specific/supported-software/e/ecCodes.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ecCodes ecCodes is a package developed by ECMWF which provides an application programming interface and a set of tools for decoding and encoding messages in the following formats: WMO FM-92 GRIB edition 1 and edition 2, WMO FM-94 BUFR edition 3 and edition 4, WMO GTS abbreviated header (only decoding). @@ -25,3 +29,6 @@ version | versionsuffix | toolchain ``2.8.2`` | | ``intel/2018a`` ``2.9.2`` | | ``intel/2018b`` ``2.9.2`` | | ``iomkl/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ecFlow.md b/docs/version-specific/supported-software/e/ecFlow.md index 7930695b6..4867da0a4 100644 --- a/docs/version-specific/supported-software/e/ecFlow.md +++ b/docs/version-specific/supported-software/e/ecFlow.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ecFlow ecFlow is a client/server workflow package that enables users to run a large number of programs (with dependencies on each other and on time) in a controlled environment. It provides reasonable tolerance for hardware and software failures, combined with restart capabilities. It is used at ECMWF to run all our operational suites across a range of platforms. @@ -7,3 +11,6 @@ ecFlow is a client/server workflow package that enables users to run a large nu version | toolchain --------|---------- ``5.7.0`` | ``GCC/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/eccodes-python.md b/docs/version-specific/supported-software/e/eccodes-python.md index cd8dba9bf..1c3cc172c 100644 --- a/docs/version-specific/supported-software/e/eccodes-python.md +++ b/docs/version-specific/supported-software/e/eccodes-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # eccodes-python Python 3 interface to decode and encode GRIB and BUFR files via the ECMWF ecCodes library. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.0.0`` | ``-Python-3.7.4`` | ``foss/2019b`` ``1.0.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``1.1.0`` | | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/eclib.md b/docs/version-specific/supported-software/e/eclib.md index ad7b7edf7..59e587120 100644 --- a/docs/version-specific/supported-software/e/eclib.md +++ b/docs/version-specific/supported-software/e/eclib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # eclib The eclib package includes mwrank (for 2-descent on elliptic curves over Q) and modular symbol code used to create the elliptic curve database. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20230424`` | ``GCC/11.3.0`` ``20240408`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/edlib.md b/docs/version-specific/supported-software/e/edlib.md index 51ff02d91..f3b32ee77 100644 --- a/docs/version-specific/supported-software/e/edlib.md +++ b/docs/version-specific/supported-software/e/edlib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # edlib Lightweight, super fast library for sequence alignment using edit (Levenshtein) distance. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``1.3.9`` | | ``GCC/11.3.0`` ``1.3.9`` | | ``GCC/12.2.0`` ``1.3.9`` | | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/eggnog-mapper.md b/docs/version-specific/supported-software/e/eggnog-mapper.md index c57495ab2..7219a8d62 100644 --- a/docs/version-specific/supported-software/e/eggnog-mapper.md +++ b/docs/version-specific/supported-software/e/eggnog-mapper.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # eggnog-mapper eggnog-mapper is a tool for fast functional annotation of novel sequences (genes or proteins) using precomputed eggNOG-based orthology assignments @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``2.1.4`` | | ``foss/2020b`` ``2.1.7`` | | ``foss/2021b`` ``2.1.9`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/eht-imaging.md b/docs/version-specific/supported-software/e/eht-imaging.md index c3123dbe8..0a1dafd5b 100644 --- a/docs/version-specific/supported-software/e/eht-imaging.md +++ b/docs/version-specific/supported-software/e/eht-imaging.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # eht-imaging Python modules for simulating and manipulating VLBI data and producing images with regularized maximum likelihood methods. @@ -7,3 +11,6 @@ Python modules for simulating and manipulating VLBI data and producing images wi version | toolchain --------|---------- ``1.2.2`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/einops.md b/docs/version-specific/supported-software/e/einops.md index 461283f4e..d835d048f 100644 --- a/docs/version-specific/supported-software/e/einops.md +++ b/docs/version-specific/supported-software/e/einops.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # einops Flexible and powerful tensor operations for readable and reliable code. Supports numpy, pytorch, tensorflow, jax, and others. @@ -10,3 +14,6 @@ version | toolchain ``0.4.1`` | ``GCCcore/10.3.0`` ``0.4.1`` | ``GCCcore/11.3.0`` ``0.7.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/elastix.md b/docs/version-specific/supported-software/e/elastix.md index 6c4019853..8269c06af 100644 --- a/docs/version-specific/supported-software/e/elastix.md +++ b/docs/version-specific/supported-software/e/elastix.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # elastix elastix: a toolbox for rigid and nonrigid registration of images. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``4.9.0`` | | ``foss/2018a`` ``5.0.0`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/elbencho.md b/docs/version-specific/supported-software/e/elbencho.md index 16c1f77b7..5cad4285c 100644 --- a/docs/version-specific/supported-software/e/elbencho.md +++ b/docs/version-specific/supported-software/e/elbencho.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # elbencho A distributed storage benchmark for files, objects & blocks with support for GPUs @@ -7,3 +11,6 @@ A distributed storage benchmark for files, objects & blocks with support for GPU version | toolchain --------|---------- ``2.0-3`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/elfutils.md b/docs/version-specific/supported-software/e/elfutils.md index 70cc3eb19..79ddf5c58 100644 --- a/docs/version-specific/supported-software/e/elfutils.md +++ b/docs/version-specific/supported-software/e/elfutils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # elfutils The elfutils project provides libraries and tools for ELF files and DWARF data. @@ -16,3 +20,6 @@ version | toolchain ``0.189`` | ``GCCcore/12.2.0`` ``0.189`` | ``GCCcore/12.3.0`` ``0.190`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/elprep.md b/docs/version-specific/supported-software/e/elprep.md index 1f2bf8dd5..98f0bbf0a 100644 --- a/docs/version-specific/supported-software/e/elprep.md +++ b/docs/version-specific/supported-software/e/elprep.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # elprep elPrep is a high-performance tool for analyzing .sam/.bam files (up to and including variant calling) in sequencing pipelines. @@ -7,3 +11,6 @@ elPrep is a high-performance tool for analyzing .sam/.bam files (up to and inclu version | toolchain --------|---------- ``5.1.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/emcee.md b/docs/version-specific/supported-software/e/emcee.md index dfad4d607..e61f14a8e 100644 --- a/docs/version-specific/supported-software/e/emcee.md +++ b/docs/version-specific/supported-software/e/emcee.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # emcee Emcee is an extensible, pure-Python implementation of Goodman & Weare's Affine Invariant Markov chain Monte Carlo (MCMC) Ensemble sampler. It's designed for Bayesian parameter estimation and it's really sweet! @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``2.2.1`` | ``-Python-3.6.6`` | ``intel/2018b`` ``3.1.4`` | | ``foss/2021b`` ``3.1.4`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/enaBrowserTool.md b/docs/version-specific/supported-software/e/enaBrowserTool.md index 1ad19fa5a..8a20ed5c2 100644 --- a/docs/version-specific/supported-software/e/enaBrowserTool.md +++ b/docs/version-specific/supported-software/e/enaBrowserTool.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # enaBrowserTool enaBrowserTools is a set of scripts that interface with the ENA web services to download data from ENA easily, without any knowledge of scripting required. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.5.4`` | ``-Python-3.7.2`` | ``GCCcore/8.2.0`` ``1.6`` | | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/enchant-2.md b/docs/version-specific/supported-software/e/enchant-2.md index 862ee224e..b4c3022a6 100644 --- a/docs/version-specific/supported-software/e/enchant-2.md +++ b/docs/version-specific/supported-software/e/enchant-2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # enchant-2 Enchant aims to provide a simple but comprehensive abstraction for dealing with different spell checking libraries in a consistent way. A client, such as a text editor or word processor, need not know anything about a specific spell-checker, and since all back-ends are plugins, new spell-checkers can be added without needing any change to the program using Enchant. @@ -9,3 +13,6 @@ version | toolchain ``2.3.3`` | ``GCCcore/11.2.0`` ``2.3.3`` | ``GCCcore/11.3.0`` ``2.6.5`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/enchant.md b/docs/version-specific/supported-software/e/enchant.md index 0bdcb5301..576c0841e 100644 --- a/docs/version-specific/supported-software/e/enchant.md +++ b/docs/version-specific/supported-software/e/enchant.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # enchant Enchant is a library (and command-line program) that wraps a number of different spelling libraries and programs with a consistent interface. @@ -7,3 +11,6 @@ Enchant is a library (and command-line program) that wraps a number of different version | toolchain --------|---------- ``1.6.1`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/ensmallen.md b/docs/version-specific/supported-software/e/ensmallen.md index 06cc9ce1a..278567fd8 100644 --- a/docs/version-specific/supported-software/e/ensmallen.md +++ b/docs/version-specific/supported-software/e/ensmallen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ensmallen ensmallen is a high-quality C++ library for non-linear numerical optimization @@ -7,3 +11,6 @@ ensmallen is a high-quality C++ library for non-linear numerical optimization version | toolchain --------|---------- ``2.21.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/entrypoints.md b/docs/version-specific/supported-software/e/entrypoints.md index cf1fa10b6..e30780bcf 100644 --- a/docs/version-specific/supported-software/e/entrypoints.md +++ b/docs/version-specific/supported-software/e/entrypoints.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # entrypoints Entry points are a way for Python packages to advertise objects with some common interface. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.2.2`` | ``-Python-2.7.12`` | ``foss/2016b`` ``0.2.2`` | ``-Python-2.7.12`` | ``intel/2016b`` ``0.2.2`` | ``-Python-3.5.2`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/epct.md b/docs/version-specific/supported-software/e/epct.md index 5fa9d0287..c43b12a6b 100644 --- a/docs/version-specific/supported-software/e/epct.md +++ b/docs/version-specific/supported-software/e/epct.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # epct This is the epct (EUMETSAT Product Customisation Toolbox) Python package for the EUMETSAT Data Tailor. The EUMETSAT Data Tailor makes it possible for users to subset and aggregate EUMETSAT data products in space and time, filter layers, generate quicklooks, project onto new coordinate reference systems, and reformat into common GIS formats (netCDF, GeoTIFF, etc.). @@ -7,3 +11,6 @@ This is the epct (EUMETSAT Product Customisation Toolbox) Python package for the version | toolchain --------|---------- ``3.2.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/epiScanpy.md b/docs/version-specific/supported-software/e/epiScanpy.md index b444063ae..b2f369ae9 100644 --- a/docs/version-specific/supported-software/e/epiScanpy.md +++ b/docs/version-specific/supported-software/e/epiScanpy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # epiScanpy EpiScanpy is a toolkit to analyse single-cell open chromatin (scATAC-seq) and single-cell DNA methylation (for example scBS-seq) data. EpiScanpy is the epigenomic extension of the very popular scRNA-seq analysis tool Scanpy (Genome Biology, 2018) [Wolf18]. @@ -9,3 +13,6 @@ version | toolchain ``0.3.1`` | ``foss/2021a`` ``0.4.0`` | ``foss/2022a`` ``0.4.0`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/eudev.md b/docs/version-specific/supported-software/e/eudev.md index b5931bc65..05716c747 100644 --- a/docs/version-specific/supported-software/e/eudev.md +++ b/docs/version-specific/supported-software/e/eudev.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # eudev eudev is a fork of systemd-udev with the goal of obtaining better compatibility with existing software such as OpenRC and Upstart, older kernels, various toolchains and anything else required by users and various distributions. @@ -11,3 +15,6 @@ version | toolchain ``3.1.5`` | ``intel/2016a`` ``3.2`` | ``GCCcore/4.9.3`` ``3.2.2`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/evince.md b/docs/version-specific/supported-software/e/evince.md index 70ad5c9af..1837cffda 100644 --- a/docs/version-specific/supported-software/e/evince.md +++ b/docs/version-specific/supported-software/e/evince.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # evince Evince is a document viewer for multiple document formats. The goal of evince is to replace the multiple document viewers that exist on the GNOME Desktop with a single simple application. @@ -7,3 +11,6 @@ Evince is a document viewer for multiple document formats. The goal of evince i version | toolchain --------|---------- ``45.0`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/evmix.md b/docs/version-specific/supported-software/e/evmix.md index 2573c9025..22f9856cf 100644 --- a/docs/version-specific/supported-software/e/evmix.md +++ b/docs/version-specific/supported-software/e/evmix.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # evmix evmix: Extreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation @@ -7,3 +11,6 @@ evmix: Extreme Value Mixture Modelling, Threshold Estimation and Boundary Corre version | versionsuffix | toolchain --------|---------------|---------- ``2.6`` | ``-R-3.3.1`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/exiv2.md b/docs/version-specific/supported-software/e/exiv2.md index d601974b9..64321d7c1 100644 --- a/docs/version-specific/supported-software/e/exiv2.md +++ b/docs/version-specific/supported-software/e/exiv2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # exiv2 Exiv2 is a Cross-platform C++ library and a command line utility to manage image metadata. @@ -9,3 +13,6 @@ version | toolchain ``0.27.4`` | ``GCCcore/10.3.0`` ``0.27.5`` | ``GCCcore/11.2.0`` ``0.28.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/expat.md b/docs/version-specific/supported-software/e/expat.md index 1c2155aca..fbae7e5a6 100644 --- a/docs/version-specific/supported-software/e/expat.md +++ b/docs/version-specific/supported-software/e/expat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # expat Expat is an XML parser library written in C. It is a stream-oriented parser in which an application registers handlers for things the parser might find in the XML document (like start tags) @@ -34,3 +38,6 @@ version | toolchain ``2.5.0`` | ``GCCcore/12.3.0`` ``2.5.0`` | ``GCCcore/13.2.0`` ``2.6.2`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/expect.md b/docs/version-specific/supported-software/e/expect.md index 244a2f83b..4c23464bf 100644 --- a/docs/version-specific/supported-software/e/expect.md +++ b/docs/version-specific/supported-software/e/expect.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # expect Expect is a tool for automating interactive applications such as telnet, ftp, passwd, fsck, rlogin, tip, etc. Expect really makes this stuff trivial. Expect is also useful for testing these same applications. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``5.45.4`` | ``GCCcore/7.3.0`` ``5.45.4`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/expecttest.md b/docs/version-specific/supported-software/e/expecttest.md index aaec0952e..96bf39498 100644 --- a/docs/version-specific/supported-software/e/expecttest.md +++ b/docs/version-specific/supported-software/e/expecttest.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # expecttest This library implements expect tests (also known as "golden" tests). Expect tests are a method of writing tests where instead of hard-coding the expected output of a test, you run the test to get the output, and the test framework automatically populates the expected output. If the output of the test changes, you can rerun the test with the environment variable EXPECTTEST_ACCEPT=1 to automatically update the expected output. @@ -13,3 +17,6 @@ version | toolchain ``0.1.3`` | ``GCCcore/12.2.0`` ``0.1.5`` | ``GCCcore/12.3.0`` ``0.2.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/e/index.md b/docs/version-specific/supported-software/e/index.md index a09ee42ed..08a54444a 100644 --- a/docs/version-specific/supported-software/e/index.md +++ b/docs/version-specific/supported-software/e/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (e) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - *e* - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [E-ANTIC](E-ANTIC.md) * [e3nn](e3nn.md) * [ea-utils](ea-utils.md) diff --git a/docs/version-specific/supported-software/f/FACE.md b/docs/version-specific/supported-software/f/FACE.md index cea357a34..356200d3d 100644 --- a/docs/version-specific/supported-software/f/FACE.md +++ b/docs/version-specific/supported-software/f/FACE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FACE A Fortran Ansi Colors (and Styles) Environment. A KISS pure Fortran Library for easy colorize (and stylize) strings. @@ -7,3 +11,6 @@ A Fortran Ansi Colors (and Styles) Environment. A KISS pure Fortran Library for version | toolchain --------|---------- ``1.1.1`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FALCON.md b/docs/version-specific/supported-software/f/FALCON.md index 756230f73..81f0cc363 100644 --- a/docs/version-specific/supported-software/f/FALCON.md +++ b/docs/version-specific/supported-software/f/FALCON.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FALCON Falcon: a set of tools for fast aligning long reads for consensus and assembly @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.8.8`` | | ``intel/2017b`` ``1.8.8`` | ``-Python-2.7.16`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FANN.md b/docs/version-specific/supported-software/f/FANN.md index 746c962dd..07140dff0 100644 --- a/docs/version-specific/supported-software/f/FANN.md +++ b/docs/version-specific/supported-software/f/FANN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FANN Fast Artificial Neural Network Library is a free open source neural network library, which implements multilayer artificial neural networks in C with support for both fully connected and sparsely connected networks. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.2.0`` | ``GCCcore/6.4.0`` ``2.2.0`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FASTA.md b/docs/version-specific/supported-software/f/FASTA.md index 5da222f46..cc82cf439 100644 --- a/docs/version-specific/supported-software/f/FASTA.md +++ b/docs/version-specific/supported-software/f/FASTA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FASTA The FASTA programs find regions of local or global (new) similarity between protein or DNA sequences, either by searching Protein or DNA databases, or by identifying local duplications within a sequence. @@ -9,3 +13,6 @@ version | toolchain ``36.3.5e`` | ``foss/2016b`` ``36.3.8i`` | ``GCC/11.2.0`` ``36.3.8i`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FASTX-Toolkit.md b/docs/version-specific/supported-software/f/FASTX-Toolkit.md index 4f255c96e..0103de190 100644 --- a/docs/version-specific/supported-software/f/FASTX-Toolkit.md +++ b/docs/version-specific/supported-software/f/FASTX-Toolkit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FASTX-Toolkit The FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing. @@ -14,3 +18,6 @@ version | toolchain ``0.0.14`` | ``foss/2016a`` ``0.0.14`` | ``foss/2016b`` ``0.0.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FBPIC.md b/docs/version-specific/supported-software/f/FBPIC.md index ce08860da..08676def8 100644 --- a/docs/version-specific/supported-software/f/FBPIC.md +++ b/docs/version-specific/supported-software/f/FBPIC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FBPIC FBPIC (Fourier-Bessel Particle-In-Cell) is a Particle-In-Cell (PIC) code for relativistic plasma physics. It is especially well-suited for physical simulations of laser-wakefield acceleration and plasma-wakefield acceleration. @@ -7,3 +11,6 @@ FBPIC (Fourier-Bessel Particle-In-Cell) is a Particle-In-Cell (PIC) code for rel version | toolchain --------|---------- ``0.20.3`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FCC.md b/docs/version-specific/supported-software/f/FCC.md index 0ea3103d3..4cec2d5df 100644 --- a/docs/version-specific/supported-software/f/FCC.md +++ b/docs/version-specific/supported-software/f/FCC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FCC Fujitsu Compiler based compiler toolchain. @@ -7,3 +11,6 @@ Fujitsu Compiler based compiler toolchain. version | toolchain --------|---------- ``4.5.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FCM.md b/docs/version-specific/supported-software/f/FCM.md index 618301fe8..3bb1d18f2 100644 --- a/docs/version-specific/supported-software/f/FCM.md +++ b/docs/version-specific/supported-software/f/FCM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FCM FCM is a set of tools for managing and building source code. @@ -7,3 +11,6 @@ FCM is a set of tools for managing and building source code. version | toolchain --------|---------- ``2.3.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FDMNES.md b/docs/version-specific/supported-software/f/FDMNES.md index cfad01f35..c99b528c6 100644 --- a/docs/version-specific/supported-software/f/FDMNES.md +++ b/docs/version-specific/supported-software/f/FDMNES.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FDMNES X-ray spectroscopies are techniques which probe the electronic and structural properties of the materials. Most often performed at synchrotron, they are extensively used to analyse all classes of materials. The advances on the experimental side need the complementary progress on the theoretical side to extract confidentely all the information the data can furnish. In this context, the purpose of our FDMNES project is to supply to the community a user friendly ab initio code to simulate X-ray absorption and emission spectroscopies as well as resonant x-ray scattering and x-ray Raman spectroscopies, among other techniques. FDMNES, for Finite Difference Method Near Edge Structure, uses the density functional theory (DFT). It is thus specially devoted to the simulation of the K edges of all the chemical elements and of the L23 edges of the heavy ones. For the other edges, it includes advances by the use of the time dependent DFT (TD-DFT). @@ -7,3 +11,6 @@ X-ray spectroscopies are techniques which probe the electronic and structural pr version | toolchain --------|---------- ``2024-02-29`` | ``gomkl/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FDS.md b/docs/version-specific/supported-software/f/FDS.md index e122317ff..2297d8906 100644 --- a/docs/version-specific/supported-software/f/FDS.md +++ b/docs/version-specific/supported-software/f/FDS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FDS Fire Dynamics Simulator (FDS) is a large-eddy simulation (LES) code for low-speed flows, with an emphasis on smoke and heat transport from fires. @@ -18,3 +22,6 @@ version | versionsuffix | toolchain ``6.7.7`` | | ``intel/2021b`` ``6.7.9`` | | ``intel/2022a`` ``6.8.0`` | | ``intel/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FDTD_Solutions.md b/docs/version-specific/supported-software/f/FDTD_Solutions.md index 0dedd58ef..8958d76f9 100644 --- a/docs/version-specific/supported-software/f/FDTD_Solutions.md +++ b/docs/version-specific/supported-software/f/FDTD_Solutions.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FDTD_Solutions High performance FDTD-method Maxwell solver for the design, analysis and optimization of nanophotonic devices, processes and materials. @@ -10,3 +14,6 @@ version | toolchain ``8.16.982`` | ``system`` ``8.20.1731`` | ``system`` ``8.6.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FEniCS.md b/docs/version-specific/supported-software/f/FEniCS.md index b1822987d..bcc70902f 100644 --- a/docs/version-specific/supported-software/f/FEniCS.md +++ b/docs/version-specific/supported-software/f/FEniCS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FEniCS FEniCS is a computing platform for solving partial differential equations (PDEs). @@ -7,3 +11,6 @@ FEniCS is a computing platform for solving partial differential equations (PDEs) version | versionsuffix | toolchain --------|---------------|---------- ``2019.1.0`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FFAVES.md b/docs/version-specific/supported-software/f/FFAVES.md index 1274b34c1..42d4e04c2 100644 --- a/docs/version-specific/supported-software/f/FFAVES.md +++ b/docs/version-specific/supported-software/f/FFAVES.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FFAVES Functional Feature Amplification Via Entropy Sorting (FFAVES). Use FFAVES to amplify the signal of groups of co-regulating genes in an unsupervised, multivariate manner. By amplifying the signal of genes with correlated expression, while filtering out genes that are randomly expressed, we can identify a subset of genes more predictive of different cell types. The output of FFAVES can then be used in our second algorithm, entropy sort feature weighting (ESFW), to create a ranked list of genes that are most likely to pertain to distinct sub-populations of cells in an scRNA-seq dataset. @@ -7,3 +11,6 @@ Functional Feature Amplification Via Entropy Sorting (FFAVES). Use FFAVES to amp version | toolchain --------|---------- ``2022.11.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FFC.md b/docs/version-specific/supported-software/f/FFC.md index 442e7e321..5c2710f0c 100644 --- a/docs/version-specific/supported-software/f/FFC.md +++ b/docs/version-specific/supported-software/f/FFC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FFC The FEniCS Form Compiler (FFC) is a compiler for finite element variational forms. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2018.1.0`` | ``-Python-3.6.4`` | ``foss/2018a`` ``2019.1.0.post0`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FFLAS-FFPACK.md b/docs/version-specific/supported-software/f/FFLAS-FFPACK.md index 8d3ef3eca..751301e36 100644 --- a/docs/version-specific/supported-software/f/FFLAS-FFPACK.md +++ b/docs/version-specific/supported-software/f/FFLAS-FFPACK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FFLAS-FFPACK Finite Field Linear Algebra Subroutines / Package @@ -9,3 +13,6 @@ version | toolchain ``2.2.0`` | ``foss/2016a`` ``2.5.0`` | ``gfbf/2022a`` ``2.5.0`` | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FFTW.MPI.md b/docs/version-specific/supported-software/f/FFTW.MPI.md index 1a9f70938..a03fbd3d0 100644 --- a/docs/version-specific/supported-software/f/FFTW.MPI.md +++ b/docs/version-specific/supported-software/f/FFTW.MPI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FFTW.MPI FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data. @@ -15,3 +19,6 @@ version | toolchain ``3.3.10`` | ``gompi/2023b`` ``3.3.10`` | ``gompi/2024.05`` ``3.3.10`` | ``nvompi/2022.07`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FFTW.md b/docs/version-specific/supported-software/f/FFTW.md index 7f4708a92..f1f44ed04 100644 --- a/docs/version-specific/supported-software/f/FFTW.md +++ b/docs/version-specific/supported-software/f/FFTW.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FFTW This is a fork of FFTW3 for the Armv8-A 64-bit architecture (AArch64) with 512-bit Scalable Vector Extension (SVE) support. @@ -78,3 +82,6 @@ version | versionsuffix | toolchain ``3.3.8`` | | ``iompi/2020b`` ``3.3.9`` | | ``gompi/2021a`` ``3.3.9`` | | ``intel/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FFmpeg.md b/docs/version-specific/supported-software/f/FFmpeg.md index ae4851e96..fe70ba8c2 100644 --- a/docs/version-specific/supported-software/f/FFmpeg.md +++ b/docs/version-specific/supported-software/f/FFmpeg.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FFmpeg A complete, cross-platform solution to record, convert and stream audio and video. @@ -41,3 +45,6 @@ version | toolchain ``5.1.2`` | ``GCCcore/12.2.0`` ``6.0`` | ``GCCcore/12.3.0`` ``6.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FGSL.md b/docs/version-specific/supported-software/f/FGSL.md index e25db98d7..0b94ef375 100644 --- a/docs/version-specific/supported-software/f/FGSL.md +++ b/docs/version-specific/supported-software/f/FGSL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FGSL FGSL: A Fortran interface to the GNU Scientific Library @@ -7,3 +11,6 @@ FGSL: A Fortran interface to the GNU Scientific Library version | toolchain --------|---------- ``1.1.0`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FHI-aims.md b/docs/version-specific/supported-software/f/FHI-aims.md index dd480bbba..e12b4e8a9 100644 --- a/docs/version-specific/supported-software/f/FHI-aims.md +++ b/docs/version-specific/supported-software/f/FHI-aims.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FHI-aims FHI-aims is an efficient, accurate all-electron, full-potential electronic structure code package for computational molecular and materials science (non-periodic and periodic systems). The code supports DFT (semilocal and hybrid) and many-body perturbation theory. FHI-aims is particularly efficient for molecular systems and nanostructures, while maintaining high numerical accuracy for all production tasks. Production calculations handle up to several thousand atoms and can efficiently use (ten) thousands of cores. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``200112_2`` | ``intel/2019b`` ``221103`` | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FIAT.md b/docs/version-specific/supported-software/f/FIAT.md index 48663d874..5e03373a9 100644 --- a/docs/version-specific/supported-software/f/FIAT.md +++ b/docs/version-specific/supported-software/f/FIAT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FIAT The FInite element Automatic Tabulator FIAT supports generation of arbitrary order instances of the Lagrange elements on lines, triangles, and tetrahedra. It is also capable of generating arbitrary order instances of Jacobi-type quadrature rules on the same element shapes. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.6.0`` | ``-Python-2.7.11`` | ``intel/2016a`` ``2018.1.0`` | ``-Python-3.6.4`` | ``foss/2018a`` ``2019.1.0`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FIGARO.md b/docs/version-specific/supported-software/f/FIGARO.md index 323670b51..191c04639 100644 --- a/docs/version-specific/supported-software/f/FIGARO.md +++ b/docs/version-specific/supported-software/f/FIGARO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FIGARO FIGARO: An efficient and objective tool for optimizing microbiome rRNA gene trimming parameters. @@ -7,3 +11,6 @@ FIGARO: An efficient and objective tool for optimizing microbiome rRNA gene trim version | toolchain --------|---------- ``1.1.2`` | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FIRESTARTER.md b/docs/version-specific/supported-software/f/FIRESTARTER.md index 8446a3fbf..699d8d57b 100644 --- a/docs/version-specific/supported-software/f/FIRESTARTER.md +++ b/docs/version-specific/supported-software/f/FIRESTARTER.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FIRESTARTER FIRESTARTER: A Processor Stress Test Utility. FIRESTARTER maximizes the energy consumption of 64-Bit x86 processors by generating heavy load on the execution units as well as transferring data between the cores and multiple levels of the memory hierarchy. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.0`` | ``gcccuda/2020a`` ``2.0`` | ``gcccuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FIX.md b/docs/version-specific/supported-software/f/FIX.md index a006e6e9e..558a58eee 100644 --- a/docs/version-specific/supported-software/f/FIX.md +++ b/docs/version-specific/supported-software/f/FIX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FIX FIX attempts to auto-classify ICA components into "good" vs "bad" components, so that the bad components can be removed from the 4D FMRI data. @@ -7,3 +11,6 @@ FIX attempts to auto-classify ICA components into "good" vs "bad" components, so version | versionsuffix | toolchain --------|---------------|---------- ``1.06.12`` | ``-Octave-Python-3.7.2`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FIt-SNE.md b/docs/version-specific/supported-software/f/FIt-SNE.md index 7c72fe89e..b206e8dad 100644 --- a/docs/version-specific/supported-software/f/FIt-SNE.md +++ b/docs/version-specific/supported-software/f/FIt-SNE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FIt-SNE t-distributed stochastic neighbor embedding (t-SNE) is widely used for visualizing single-cell RNA-sequencing (scRNA-seq) data, but it scales poorly to large datasets. We dramatically accelerate t-SNE, obviating the need for data downsampling, and hence allowing visualization of rare cell populations. Furthermore, we implement a heatmap-style visualization for scRNA-seq based on one-dimensional t-SNE for simultaneously visualizing the expression patterns of thousands of genes. @@ -7,3 +11,6 @@ t-distributed stochastic neighbor embedding (t-SNE) is widely used for visualiz version | toolchain --------|---------- ``1.1.0`` | ``gompi/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FLAC.md b/docs/version-specific/supported-software/f/FLAC.md index 4d9f64bf2..93b567524 100644 --- a/docs/version-specific/supported-software/f/FLAC.md +++ b/docs/version-specific/supported-software/f/FLAC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FLAC FLAC stands for Free Lossless Audio Codec, an audio format similar to MP3, but lossless, meaning that audio is compressed in FLAC without any loss in quality. @@ -12,3 +16,6 @@ version | toolchain ``1.3.4`` | ``GCCcore/11.3.0`` ``1.4.2`` | ``GCCcore/12.2.0`` ``1.4.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FLAIR.md b/docs/version-specific/supported-software/f/FLAIR.md index 529c4e955..7e54f9975 100644 --- a/docs/version-specific/supported-software/f/FLAIR.md +++ b/docs/version-specific/supported-software/f/FLAIR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FLAIR FLAIR (Full-Length Alternative Isoform analysis of RNA) for the correction, isoform definition, and alternative splicing analysis of noisy reads. FLAIR has primarily been used for nanopore cDNA, native RNA, and PacBio sequencing reads. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.5`` | ``-Python-3.7.4`` | ``foss/2019b`` ``1.5.1-20200630`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FLANN.md b/docs/version-specific/supported-software/f/FLANN.md index 99cf886aa..3cce3cfc9 100644 --- a/docs/version-specific/supported-software/f/FLANN.md +++ b/docs/version-specific/supported-software/f/FLANN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FLANN FLANN is a library for performing fast approximate nearest neighbor searches in high dimensional spaces. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.8.4`` | ``-Python-2.7.11`` | ``intel/2016a`` ``1.8.4`` | ``-Python-2.7.14`` | ``intel/2017b`` ``1.9.1`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FLASH.md b/docs/version-specific/supported-software/f/FLASH.md index d8e04b1a1..f43373b56 100644 --- a/docs/version-specific/supported-software/f/FLASH.md +++ b/docs/version-specific/supported-software/f/FLASH.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FLASH FLASH (Fast Length Adjustment of SHort reads) is a very fast and accurate software tool to merge paired-end reads from next-generation sequencing experiments. FLASH is designed to merge pairs of reads when the original DNA fragments are shorter than twice the length of reads. The resulting longer reads can significantly improve genome assemblies. They can also improve transcriptome assembly when FLASH is used to merge RNA-seq data. @@ -14,3 +18,6 @@ version | toolchain ``2.2.00`` | ``GCCcore/12.2.0`` ``2.2.00`` | ``foss/2018b`` ``2.2.00`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FLEUR.md b/docs/version-specific/supported-software/f/FLEUR.md index 85e145df5..e01fb23ae 100644 --- a/docs/version-specific/supported-software/f/FLEUR.md +++ b/docs/version-specific/supported-software/f/FLEUR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FLEUR FLEUR is a feature-full, freely available FLAPW (full potential linearized augmented planewave) code, based on density-functional theory. @@ -7,3 +11,6 @@ FLEUR is a feature-full, freely available FLAPW (full potential linearized augme version | toolchain --------|---------- ``0.26e`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FLINT.md b/docs/version-specific/supported-software/f/FLINT.md index faa2b3d15..0cd20eda8 100644 --- a/docs/version-specific/supported-software/f/FLINT.md +++ b/docs/version-specific/supported-software/f/FLINT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FLINT FLINT (Fast Library for Number Theory) is a C library in support of computations in number theory. Operations that can be performed include conversions, arithmetic, computing GCDs, factoring, solving linear systems, and evaluating special functions. In addition, FLINT provides various low-level routines for fast arithmetic. FLINT is extensively documented and tested. @@ -15,3 +19,6 @@ version | toolchain ``2.9.0`` | ``gfbf/2022a`` ``2.9.0`` | ``gfbf/2022b`` ``3.1.1`` | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FLTK.md b/docs/version-specific/supported-software/f/FLTK.md index 2fe81a752..982ee5c56 100644 --- a/docs/version-specific/supported-software/f/FLTK.md +++ b/docs/version-specific/supported-software/f/FLTK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FLTK FLTK is a cross-platform C++ GUI toolkit for UNIX/Linux (X11), Microsoft Windows, and MacOS X. FLTK provides modern GUI functionality without the bloat and supports 3D graphics via OpenGL and its built-in GLUT emulation. @@ -31,3 +35,6 @@ version | toolchain ``1.3.8`` | ``GCCcore/12.2.0`` ``1.3.8`` | ``GCCcore/12.3.0`` ``1.3.9`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FLUENT.md b/docs/version-specific/supported-software/f/FLUENT.md index 9e3b73b30..6d313e398 100644 --- a/docs/version-specific/supported-software/f/FLUENT.md +++ b/docs/version-specific/supported-software/f/FLUENT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FLUENT ANSYS FLUENT software contains the broad physical modeling capabilities needed to model flow, turbulence, heat transfer, and reactions for industrial applications ranging from air flow over an aircraft wing to combustion in a furnace, from bubble columns to oil platforms, from blood flow to semiconductor manufacturing, and from clean room design to wastewater treatment plants. @@ -16,3 +20,6 @@ version | toolchain ``2019R3`` | ``system`` ``2021R1`` | ``system`` ``2021R2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FMILibrary.md b/docs/version-specific/supported-software/f/FMILibrary.md index 404de597d..a2ec24bfe 100644 --- a/docs/version-specific/supported-software/f/FMILibrary.md +++ b/docs/version-specific/supported-software/f/FMILibrary.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FMILibrary FMI library is intended as a foundation for applications interfacing FMUs (Functional Mockup Units) that follow FMI Standard. This version of the library supports FMI 1.0 and FMI2.0. See http://www.fmi-standard.org/ @@ -7,3 +11,6 @@ FMI library is intended as a foundation for applications interfacing FMUs (Func version | toolchain --------|---------- ``2.0.3`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FMM3D.md b/docs/version-specific/supported-software/f/FMM3D.md index 9edfc4a9b..a402da2cc 100644 --- a/docs/version-specific/supported-software/f/FMM3D.md +++ b/docs/version-specific/supported-software/f/FMM3D.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FMM3D Flatiron Institute Fast Multipole Libraries: a set of libraries to compute N-body interactions governed by the Laplace and Helmholtz equations, to a specified precision, in three dimensions, on a multi-core shared-memory machine. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.4`` | ``foss/2023a`` ``20211018`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FMPy.md b/docs/version-specific/supported-software/f/FMPy.md index 9e4423f74..c186e9826 100644 --- a/docs/version-specific/supported-software/f/FMPy.md +++ b/docs/version-specific/supported-software/f/FMPy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FMPy FMPy is a free Python library to simulate Functional Mock-up Units (FMUs). @@ -7,3 +11,6 @@ FMPy is a free Python library to simulate Functional Mock-up Units (FMUs). version | toolchain --------|---------- ``0.3.2`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FMRIprep.md b/docs/version-specific/supported-software/f/FMRIprep.md index 350375dea..52f4f86f3 100644 --- a/docs/version-specific/supported-software/f/FMRIprep.md +++ b/docs/version-specific/supported-software/f/FMRIprep.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FMRIprep FMRIprep is a functional magnetic resonance imaging (fMRI) data preprocessing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to variations in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.1.8`` | ``-Python-3.6.6`` | ``foss/2018b`` ``1.4.1`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FMS.md b/docs/version-specific/supported-software/f/FMS.md index 09993347e..519cdd0db 100644 --- a/docs/version-specific/supported-software/f/FMS.md +++ b/docs/version-specific/supported-software/f/FMS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FMS The Flexible Modeling System (FMS) is a software framework for supporting the efficient development, construction, execution, and scientific interpretation of atmospheric, oceanic, and climate system models. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2022.02`` | ``gompi/2022a`` ``2022.02`` | ``iimpi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FORD.md b/docs/version-specific/supported-software/f/FORD.md index 35eb106ee..7d7e9ea98 100644 --- a/docs/version-specific/supported-software/f/FORD.md +++ b/docs/version-specific/supported-software/f/FORD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FORD FORD is an automatic documentation generator for modern Fortran programs @@ -9,3 +13,6 @@ version | toolchain ``6.1.1`` | ``GCCcore/10.2.0`` ``6.1.15`` | ``GCCcore/11.3.0`` ``6.1.6`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FOX-Toolkit.md b/docs/version-specific/supported-software/f/FOX-Toolkit.md index fe5e7f142..e030605c7 100644 --- a/docs/version-specific/supported-software/f/FOX-Toolkit.md +++ b/docs/version-specific/supported-software/f/FOX-Toolkit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FOX-Toolkit FOX is a C++ based Toolkit for developing Graphical User Interfaces easily and effectively. It offers a wide, and growing, collection of Controls, and provides state of the art facilities such as drag and drop, selection, as well as OpenGL widgets for 3D graphical manipulation. FOX also implements icons, images, and user-convenience features such as status line help, and tooltips. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.6.57`` | ``GCCcore/11.2.0`` ``1.6.57`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FPM.md b/docs/version-specific/supported-software/f/FPM.md index 607c6cad0..b44b952d8 100644 --- a/docs/version-specific/supported-software/f/FPM.md +++ b/docs/version-specific/supported-software/f/FPM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FPM Effing package management! Build packages for multiple platforms (deb, rpm, etc) with great ease and sanity. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.15.1`` | | ``GCCcore/12.2.0`` ``1.3.3`` | ``-Ruby-2.1.6`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FRANz.md b/docs/version-specific/supported-software/f/FRANz.md index e47bea3c3..c096429d0 100644 --- a/docs/version-specific/supported-software/f/FRANz.md +++ b/docs/version-specific/supported-software/f/FRANz.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FRANz A fast and flexible parentage inference program for natural populations. @@ -7,3 +11,6 @@ A fast and flexible parentage inference program for natural populations. version | toolchain --------|---------- ``2.0.0`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FRUIT.md b/docs/version-specific/supported-software/f/FRUIT.md index 6da087966..9b823f8fa 100644 --- a/docs/version-specific/supported-software/f/FRUIT.md +++ b/docs/version-specific/supported-software/f/FRUIT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FRUIT FORTRAN Unit Test Framework (FRUIT) @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.4.3`` | ``-Ruby-2.5.1`` | ``foss/2018a`` ``3.4.3`` | ``-Ruby-2.5.1`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FRUIT_processor.md b/docs/version-specific/supported-software/f/FRUIT_processor.md index 63ffa80e6..b45f9f2bb 100644 --- a/docs/version-specific/supported-software/f/FRUIT_processor.md +++ b/docs/version-specific/supported-software/f/FRUIT_processor.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FRUIT_processor FORTRAN Unit Test Framework (FRUIT) @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.4.3`` | ``-Ruby-2.5.1`` | ``foss/2018a`` ``3.4.3`` | ``-Ruby-2.5.1`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FSL.md b/docs/version-specific/supported-software/f/FSL.md index c29edf046..a5dfdd1a8 100644 --- a/docs/version-specific/supported-software/f/FSL.md +++ b/docs/version-specific/supported-software/f/FSL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FSL FSL is a comprehensive library of analysis tools for FMRI, MRI and DTI brain imaging data. @@ -23,3 +27,6 @@ version | versionsuffix | toolchain ``6.0.3`` | ``-Python-3.7.4`` | ``foss/2019b`` ``6.0.4`` | ``-Python-3.7.4`` | ``foss/2019b`` ``6.0.5.1`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FSLeyes.md b/docs/version-specific/supported-software/f/FSLeyes.md index e47f62b8b..2ded4e98d 100644 --- a/docs/version-specific/supported-software/f/FSLeyes.md +++ b/docs/version-specific/supported-software/f/FSLeyes.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FSLeyes FSLeyes is the FSL image viewer. @@ -7,3 +11,6 @@ FSLeyes is the FSL image viewer. version | versionsuffix | toolchain --------|---------------|---------- ``0.15.0`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FSON.md b/docs/version-specific/supported-software/f/FSON.md index a70e851d6..ca402b483 100644 --- a/docs/version-specific/supported-software/f/FSON.md +++ b/docs/version-specific/supported-software/f/FSON.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FSON Fortran 95 JSON Parser @@ -7,3 +11,6 @@ Fortran 95 JSON Parser version | toolchain --------|---------- ``1.0.5`` | ``GCC/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FTGL.md b/docs/version-specific/supported-software/f/FTGL.md index a7927e7ed..319b2121e 100644 --- a/docs/version-specific/supported-software/f/FTGL.md +++ b/docs/version-specific/supported-software/f/FTGL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FTGL FTGL is a free open source library to enable developers to use arbitrary fonts in their OpenGL (www.opengl.org) applications. @@ -13,3 +17,6 @@ version | toolchain ``2.1.3-rc5`` | ``fosscuda/2018b`` ``2.1.3-rc5`` | ``intel/2017b`` ``2.4.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FUNWAVE-TVD.md b/docs/version-specific/supported-software/f/FUNWAVE-TVD.md index f41c7ae9c..e0eebf72c 100644 --- a/docs/version-specific/supported-software/f/FUNWAVE-TVD.md +++ b/docs/version-specific/supported-software/f/FUNWAVE-TVD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FUNWAVE-TVD FUNWAVE–TVD is the TVD version of the fully nonlinear Boussinesq wave model (FUNWAVE) initially developed by Kirby et al. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.1-20170525`` | ``-no-storm`` | ``intel/2017a`` ``3.1-20170525`` | | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FUSE.md b/docs/version-specific/supported-software/f/FUSE.md index c629fadc9..d14196fe7 100644 --- a/docs/version-specific/supported-software/f/FUSE.md +++ b/docs/version-specific/supported-software/f/FUSE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FUSE The reference implementation of the Linux FUSE (Filesystem in Userspace) interface @@ -10,3 +14,6 @@ version | toolchain ``3.14.1`` | ``GCCcore/12.2.0`` ``3.2.6`` | ``intel/2018a`` ``3.4.1`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FabIO.md b/docs/version-specific/supported-software/f/FabIO.md index 9617af149..0d0b25ff4 100644 --- a/docs/version-specific/supported-software/f/FabIO.md +++ b/docs/version-specific/supported-software/f/FabIO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FabIO FabIO is an I/O library for images produced by 2D X-ray detectors and written in Python. FabIO support images detectors from a dozen of companies (including Mar, Dectris, ADSC, Hamamatsu, Oxford, ...), for a total of 20 different file formats (like CBF, EDF, TIFF, ...) and offers an unified interface to their headers (as a python dictionary) and datasets (as a numpy ndarray of integers or floats). @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.11.0`` | | ``foss/2020b`` ``0.11.0`` | | ``fosscuda/2020b`` ``0.14.0`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/Faber.md b/docs/version-specific/supported-software/f/Faber.md index 4f11521ac..ce14e7b9d 100644 --- a/docs/version-specific/supported-software/f/Faber.md +++ b/docs/version-specific/supported-software/f/Faber.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Faber Faber started as a clone of Boost.Build, to experiment with a new Python frontend. Meanwhile it has evolved into a new build system, which retains most of the features found in Boost.Build, but with (hopefully !) much simplified logic, in addition of course to using Python as scripting language, rather than Jam. The original bjam engine is still in use as scheduler, though at this point that is mostly an implementation detail. @@ -7,3 +11,6 @@ Faber started as a clone of Boost.Build, to experiment with a new Python fronte version | toolchain --------|---------- ``0.3`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/Faiss.md b/docs/version-specific/supported-software/f/Faiss.md index 51772b04d..dd81069fb 100644 --- a/docs/version-specific/supported-software/f/Faiss.md +++ b/docs/version-specific/supported-software/f/Faiss.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Faiss Faiss is a library for efficient similarity search and clustering of dense vectors. It contains algorithms that search in sets of vectors of any size, up to ones that possibly do not fit in RAM. It also contains supporting code for evaluation and parameter tuning. Faiss is written in C++ with complete wrappers for Python/numpy. Some of the most useful algorithms are implemented on the GPU. It is developed primarily at Meta's Fundamental AI Research group. @@ -7,3 +11,6 @@ Faiss is a library for efficient similarity search and clustering of dense vect version | versionsuffix | toolchain --------|---------------|---------- ``1.7.4`` | ``-CUDA-12.1.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FastANI.md b/docs/version-specific/supported-software/f/FastANI.md index a094772c5..75274cf50 100644 --- a/docs/version-specific/supported-software/f/FastANI.md +++ b/docs/version-specific/supported-software/f/FastANI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FastANI FastANI is developed for fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI). ANI is defined as mean nucleotide identity of orthologous gene pairs shared between two microbial genomes. FastANI supports pairwise comparison of both complete and draft genome assemblies. @@ -19,3 +23,6 @@ version | toolchain ``1.33`` | ``iccifort/2020.4.304`` ``1.33`` | ``intel-compilers/2021.4.0`` ``1.34`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FastFold.md b/docs/version-specific/supported-software/f/FastFold.md index cd6d7a693..57469fcad 100644 --- a/docs/version-specific/supported-software/f/FastFold.md +++ b/docs/version-specific/supported-software/f/FastFold.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FastFold Optimizing Protein Structure Prediction Model Training and Inference on GPU Clusters @@ -7,3 +11,6 @@ Optimizing Protein Structure Prediction Model Training and Inference on GPU Clus version | versionsuffix | toolchain --------|---------------|---------- ``20220729`` | ``-CUDA-11.3.1`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FastME.md b/docs/version-specific/supported-software/f/FastME.md index 9bf9c3625..413a9f6aa 100644 --- a/docs/version-specific/supported-software/f/FastME.md +++ b/docs/version-specific/supported-software/f/FastME.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FastME FastME: a comprehensive, accurate and fast distance-based phylogeny inference program. @@ -13,3 +17,6 @@ version | toolchain ``2.1.6.1`` | ``intel/2018a`` ``2.1.6.1`` | ``intel/2018b`` ``2.1.6.3`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FastQC.md b/docs/version-specific/supported-software/f/FastQC.md index 841493960..0d472725e 100644 --- a/docs/version-specific/supported-software/f/FastQC.md +++ b/docs/version-specific/supported-software/f/FastQC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FastQC FastQC is a quality control application for high throughput sequence data. It reads in sequence data in a variety of formats and can either provide an interactive application to review the results of several different QC checks, or create an HTML based report which can be integrated into a pipeline. @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``0.11.9`` | ``-Java-1.8`` | ``system`` ``0.11.9`` | ``-Java-11`` | ``system`` ``0.12.1`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FastQTL.md b/docs/version-specific/supported-software/f/FastQTL.md index f359d0efe..eb8780f51 100644 --- a/docs/version-specific/supported-software/f/FastQTL.md +++ b/docs/version-specific/supported-software/f/FastQTL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FastQTL FastQTL is a QTL mapper @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.184`` | ``GCC/11.2.0`` ``2.184`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FastQ_Screen.md b/docs/version-specific/supported-software/f/FastQ_Screen.md index 1401a1374..c8ebe1220 100644 --- a/docs/version-specific/supported-software/f/FastQ_Screen.md +++ b/docs/version-specific/supported-software/f/FastQ_Screen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FastQ_Screen FastQ Screen allows you to screen a library of sequences in FastQ format against a set of sequence databases so you can see if the composition of the library matches with what you expect. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.12.0`` | ``-Perl-5.26.1`` | ``intel/2018a`` ``0.13.0`` | ``-Perl-5.28.0`` | ``foss/2018b`` ``0.14.0`` | | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FastRFS.md b/docs/version-specific/supported-software/f/FastRFS.md index 02570300f..86fe9c344 100644 --- a/docs/version-specific/supported-software/f/FastRFS.md +++ b/docs/version-specific/supported-software/f/FastRFS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FastRFS Fast Robinson Foulds Supertrees @@ -7,3 +11,6 @@ Fast Robinson Foulds Supertrees version | toolchain --------|---------- ``1.0-20190613`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FastTree.md b/docs/version-specific/supported-software/f/FastTree.md index dcda5bb6e..1fde0ff1b 100644 --- a/docs/version-specific/supported-software/f/FastTree.md +++ b/docs/version-specific/supported-software/f/FastTree.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FastTree FastTree infers approximately-maximum-likelihood phylogenetic trees from alignments of nucleotide or protein sequences. FastTree can handle alignments with up to a million of sequences in a reasonable amount of time and memory. @@ -18,3 +22,6 @@ version | toolchain ``2.1.11`` | ``GCCcore/8.2.0`` ``2.1.11`` | ``GCCcore/8.3.0`` ``2.1.11`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FastViromeExplorer.md b/docs/version-specific/supported-software/f/FastViromeExplorer.md index 34853bd8b..572161bfa 100644 --- a/docs/version-specific/supported-software/f/FastViromeExplorer.md +++ b/docs/version-specific/supported-software/f/FastViromeExplorer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FastViromeExplorer Identify the viruses/phages and their abundance in the viral metagenomics data. @@ -7,3 +11,6 @@ Identify the viruses/phages and their abundance in the viral metagenomics data. version | toolchain --------|---------- ``20180422`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FastaIndex.md b/docs/version-specific/supported-software/f/FastaIndex.md index 9525b15f3..8cfc86183 100644 --- a/docs/version-specific/supported-software/f/FastaIndex.md +++ b/docs/version-specific/supported-software/f/FastaIndex.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FastaIndex FastA index (.fai) handler compatible with samtools faidx @@ -7,3 +11,6 @@ FastA index (.fai) handler compatible with samtools faidx version | versionsuffix | toolchain --------|---------------|---------- ``0.11rc7`` | ``-Python-2.7.14`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/Fastaq.md b/docs/version-specific/supported-software/f/Fastaq.md index 6e5154f1a..55f2c504b 100644 --- a/docs/version-specific/supported-software/f/Fastaq.md +++ b/docs/version-specific/supported-software/f/Fastaq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Fastaq Python3 scripts to manipulate FASTA and FASTQ files. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.17.0`` | ``GCC/10.3.0`` ``3.17.0`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/Ferret.md b/docs/version-specific/supported-software/f/Ferret.md index 764b99c26..4e23a5891 100644 --- a/docs/version-specific/supported-software/f/Ferret.md +++ b/docs/version-specific/supported-software/f/Ferret.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Ferret Ferret is an interactive computer visualization and analysis environment designed to meet the needs of oceanographers and meteorologists analyzing large and complex gridded data sets. @@ -9,3 +13,6 @@ version | toolchain ``7.3`` | ``intel/2017b`` ``7.5.0`` | ``foss/2019b`` ``7.6.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FigureGen.md b/docs/version-specific/supported-software/f/FigureGen.md index f2fc43d74..cf516882b 100644 --- a/docs/version-specific/supported-software/f/FigureGen.md +++ b/docs/version-specific/supported-software/f/FigureGen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FigureGen FigureGen is a Fortran program that creates images for ADCIRC files. It reads mesh files (fort.14, etc.), nodal attributes files (fort.13, etc.) and output files (fort.63, fort.64, maxele.63, etc.). It plots contours, contour lines, and vectors. Using FigureGen, you can go directly from the ADCIRC input and output files to a presentation-quality figure, for one or multiple time snaps. @@ -7,3 +11,6 @@ FigureGen is a Fortran program that creates images for ADCIRC files. It reads me version | toolchain --------|---------- ``51-20190516`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/Fiji.md b/docs/version-specific/supported-software/f/Fiji.md index 98de049a7..8bdb9decb 100644 --- a/docs/version-specific/supported-software/f/Fiji.md +++ b/docs/version-specific/supported-software/f/Fiji.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Fiji Fiji is an image processing package—a 'batteries-included' distribution of ImageJ, bundling a lot of plugins which facilitate scientific image analysis. This release is based on ImageJ-2.1.0 and Fiji-2.1.1 @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``20170530`` | | ``system`` ``20191119-2057`` | | ``system`` ``20201104-1356`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/Filtlong.md b/docs/version-specific/supported-software/f/Filtlong.md index 98c32908f..e73b42ed3 100644 --- a/docs/version-specific/supported-software/f/Filtlong.md +++ b/docs/version-specific/supported-software/f/Filtlong.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Filtlong Filtlong is a tool for filtering long reads by quality. It can take a set of long reads and produce a smaller, better subset. It uses both read length (longer is better) and read identity (higher is better) when choosing which reads pass the filter @@ -9,3 +13,6 @@ version | toolchain ``0.2.0`` | ``GCC/10.2.0`` ``0.2.0`` | ``foss/2016b`` ``0.2.1`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/Fiona.md b/docs/version-specific/supported-software/f/Fiona.md index 04182ca35..1ac838e18 100644 --- a/docs/version-specific/supported-software/f/Fiona.md +++ b/docs/version-specific/supported-software/f/Fiona.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Fiona Fiona is designed to be simple and dependable. It focuses on reading and writing data in standard Python IO style and relies upon familiar Python types and protocols such as files, dictionaries, mappings, and iterators instead of classes specific to OGR. Fiona can read and write real-world data using multi-layered GIS formats and zipped virtual file systems and integrates readily with other Python GIS packages such as pyproj, Rtree, and Shapely. @@ -18,3 +22,6 @@ version | versionsuffix | toolchain ``1.8.21`` | | ``foss/2022a`` ``1.9.2`` | | ``foss/2022b`` ``1.9.5`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FireWorks.md b/docs/version-specific/supported-software/f/FireWorks.md index cadf1f996..201ac4e23 100644 --- a/docs/version-specific/supported-software/f/FireWorks.md +++ b/docs/version-specific/supported-software/f/FireWorks.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FireWorks FireWorks helps run calculation workflows, with a centralized workflow server controlling many worker nodes. @@ -7,3 +11,6 @@ FireWorks helps run calculation workflows, with a centralized workflow server c version | versionsuffix | toolchain --------|---------------|---------- ``1.4.2`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/Firefox.md b/docs/version-specific/supported-software/f/Firefox.md index f577156d4..837543801 100644 --- a/docs/version-specific/supported-software/f/Firefox.md +++ b/docs/version-specific/supported-software/f/Firefox.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Firefox Firefox is a free, open source Web browser for Windows, Linux and Mac OS X. It is based on the Mozilla code base and offers customization options and features such as its capability to block pop-up windows, tabbed browsing, privacy and security measures, smart searching, and RSS live bookmarks. @@ -7,3 +11,6 @@ Firefox is a free, open source Web browser for Windows, Linux and Mac OS X. It i version | toolchain --------|---------- ``44.0.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/Flask.md b/docs/version-specific/supported-software/f/Flask.md index 8e66e9863..44c163816 100644 --- a/docs/version-specific/supported-software/f/Flask.md +++ b/docs/version-specific/supported-software/f/Flask.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Flask " Flask is a lightweight WSGI web application framework. It is designed to make getting started quick and easy, with the ability to scale up to complex applications. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``2.2.3`` | | ``GCCcore/12.2.0`` ``2.3.3`` | | ``GCCcore/12.3.0`` ``3.0.0`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/Flexbar.md b/docs/version-specific/supported-software/f/Flexbar.md index ee0d2dfe0..9bf692fbd 100644 --- a/docs/version-specific/supported-software/f/Flexbar.md +++ b/docs/version-specific/supported-software/f/Flexbar.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Flexbar The program Flexbar preprocesses high-throughput sequencing data efficiently @@ -7,3 +11,6 @@ The program Flexbar preprocesses high-throughput sequencing data efficiently version | toolchain --------|---------- ``3.5.0`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FlexiBLAS.md b/docs/version-specific/supported-software/f/FlexiBLAS.md index 51ad38036..03c789d64 100644 --- a/docs/version-specific/supported-software/f/FlexiBLAS.md +++ b/docs/version-specific/supported-software/f/FlexiBLAS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FlexiBLAS FlexiBLAS is a wrapper library that enables the exchange of the BLAS and LAPACK implementation used by a program without recompiling or relinking it. @@ -15,3 +19,6 @@ version | toolchain ``3.3.1`` | ``GCC/12.3.0`` ``3.3.1`` | ``GCC/13.2.0`` ``3.4.4`` | ``GCC/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FlexiDot.md b/docs/version-specific/supported-software/f/FlexiDot.md index 98f8b9d87..9d32dffa2 100644 --- a/docs/version-specific/supported-software/f/FlexiDot.md +++ b/docs/version-specific/supported-software/f/FlexiDot.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FlexiDot Highly customizable, ambiguity-aware dotplots for visual sequence analyses @@ -7,3 +11,6 @@ Highly customizable, ambiguity-aware dotplots for visual sequence analyses version | versionsuffix | toolchain --------|---------------|---------- ``1.06`` | ``-Python-2.7.15`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/Flink.md b/docs/version-specific/supported-software/f/Flink.md index 43df49a3a..33c6c16fb 100644 --- a/docs/version-specific/supported-software/f/Flink.md +++ b/docs/version-specific/supported-software/f/Flink.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Flink Apache Flink is a framework and distributed processing engine for stateful computations over unbounded and bounded data streams. Flink has been designed to run in all common cluster environments, perform computations at in-memory speed and at any scale. @@ -7,3 +11,6 @@ Apache Flink is a framework and distributed processing engine for stateful compu version | versionsuffix | toolchain --------|---------------|---------- ``1.11.2`` | ``-bin-scala_2.11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/Flye.md b/docs/version-specific/supported-software/f/Flye.md index a0f9f36fc..adba496ba 100644 --- a/docs/version-specific/supported-software/f/Flye.md +++ b/docs/version-specific/supported-software/f/Flye.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Flye Flye is a de novo assembler for long and noisy reads, such as those produced by PacBio and Oxford Nanopore Technologies. @@ -19,3 +23,6 @@ version | versionsuffix | toolchain ``2.9.2`` | | ``GCC/11.3.0`` ``2.9.3`` | | ``GCC/10.3.0`` ``2.9.3`` | | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FoBiS.md b/docs/version-specific/supported-software/f/FoBiS.md index 465ccfe1d..d4a38ab83 100644 --- a/docs/version-specific/supported-software/f/FoBiS.md +++ b/docs/version-specific/supported-software/f/FoBiS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FoBiS A Fortran Building System for automatic building modern Fortran projects @@ -7,3 +11,6 @@ A Fortran Building System for automatic building modern Fortran projects version | toolchain --------|---------- ``3.0.5`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FoX.md b/docs/version-specific/supported-software/f/FoX.md index a27e178a1..b1e82ecf1 100644 --- a/docs/version-specific/supported-software/f/FoX.md +++ b/docs/version-specific/supported-software/f/FoX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FoX FoX is an XML library written in Fortran 95. It allows software developers to read, write and modify XML documents from Fortran applications without the complications of dealing with multi-language development. @@ -10,3 +14,6 @@ version | toolchain ``4.1.2`` | ``GCC/9.3.0`` ``4.1.2`` | ``intel/2017b`` ``4.1.2`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FoldX.md b/docs/version-specific/supported-software/f/FoldX.md index 16d0b24c8..9ba8e0b43 100644 --- a/docs/version-specific/supported-software/f/FoldX.md +++ b/docs/version-specific/supported-software/f/FoldX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FoldX FoldX is used to provide a fast and quantitative estimation of the importance of the interactions contributing to the stability of proteins and protein complexes. @@ -10,3 +14,6 @@ version | toolchain ``3.0-beta5.1`` | ``system`` ``3.0-beta6.1`` | ``system`` ``3.0-beta6`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FragGeneScan.md b/docs/version-specific/supported-software/f/FragGeneScan.md index 03d129d1e..9fe7da30d 100644 --- a/docs/version-specific/supported-software/f/FragGeneScan.md +++ b/docs/version-specific/supported-software/f/FragGeneScan.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FragGeneScan FragGeneScan is an application for finding (fragmented) genes in short reads. @@ -12,3 +16,6 @@ version | toolchain ``1.31`` | ``GCCcore/11.3.0`` ``1.31`` | ``GCCcore/8.2.0`` ``1.31`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FragPipe.md b/docs/version-specific/supported-software/f/FragPipe.md index f6c47ac11..9d3269618 100644 --- a/docs/version-specific/supported-software/f/FragPipe.md +++ b/docs/version-specific/supported-software/f/FragPipe.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FragPipe FragPipe is a Java Graphical User Interface (GUI) for a suite of computational tools enabling comprehensive analysis of mass spectrometry-based proteomics data. @@ -7,3 +11,6 @@ FragPipe is a Java Graphical User Interface (GUI) for a suite of computational version | versionsuffix | toolchain --------|---------------|---------- ``20.0`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FreeBarcodes.md b/docs/version-specific/supported-software/f/FreeBarcodes.md index 029672841..4564abe72 100644 --- a/docs/version-specific/supported-software/f/FreeBarcodes.md +++ b/docs/version-specific/supported-software/f/FreeBarcodes.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FreeBarcodes A package for the generation and decoding of FREE divergence error-correcting DNA barcodes @@ -7,3 +11,6 @@ A package for the generation and decoding of FREE divergence error-correcting DN version | toolchain --------|---------- ``3.0.a5`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FreeFEM.md b/docs/version-specific/supported-software/f/FreeFEM.md index a7704c383..c1b0c9d55 100644 --- a/docs/version-specific/supported-software/f/FreeFEM.md +++ b/docs/version-specific/supported-software/f/FreeFEM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FreeFEM FreeFEM offers a fast interpolation algorithm and a language for the manipulation of data on multiple meshes. @@ -7,3 +11,6 @@ FreeFEM offers a fast interpolation algorithm and a language for the manipulatio version | versionsuffix | toolchain --------|---------------|---------- ``4.5`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FreeFem++.md b/docs/version-specific/supported-software/f/FreeFem++.md index db1c920d7..b1e3c1f38 100644 --- a/docs/version-specific/supported-software/f/FreeFem++.md +++ b/docs/version-specific/supported-software/f/FreeFem++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FreeFem++ FreeFem++ is a partial differential equation solver. It has its own language. freefem scripts can solve multiphysics non linear systems in 2D and 3D. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``3.58`` | ``-downloaded-deps`` | ``foss/2017b`` ``3.60`` | ``-downloaded-deps`` | ``intel/2018a`` ``3.61-1`` | ``-downloaded-deps`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FreeImage.md b/docs/version-specific/supported-software/f/FreeImage.md index d917f61a4..35674571f 100644 --- a/docs/version-specific/supported-software/f/FreeImage.md +++ b/docs/version-specific/supported-software/f/FreeImage.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FreeImage FreeImage is an Open Source library project for developers who would like to support popular graphics image formats like PNG, BMP, JPEG, TIFF and others as needed by today's multimedia applications. FreeImage is easy to use, fast, multithreading safe. @@ -15,3 +19,6 @@ version | toolchain ``3.18.0`` | ``GCCcore/7.3.0`` ``3.18.0`` | ``GCCcore/8.3.0`` ``3.18.0`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FreeSASA.md b/docs/version-specific/supported-software/f/FreeSASA.md index 66348dede..99fbe4130 100644 --- a/docs/version-specific/supported-software/f/FreeSASA.md +++ b/docs/version-specific/supported-software/f/FreeSASA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FreeSASA FreeSASA is a command line tool, C-library and Python module for calculating solvent accessible surface areas (SASA). @@ -7,3 +11,6 @@ FreeSASA is a command line tool, C-library and Python module for calculating sol version | toolchain --------|---------- ``2.0.3`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FreeSurfer.md b/docs/version-specific/supported-software/f/FreeSurfer.md index dcfbc762c..40bdfa739 100644 --- a/docs/version-specific/supported-software/f/FreeSurfer.md +++ b/docs/version-specific/supported-software/f/FreeSurfer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FreeSurfer FreeSurfer is a set of tools for analysis and visualization of structural and functional brain imaging data. FreeSurfer contains a fully automatic structural imaging stream for processing cross sectional and longitudinal data. @@ -25,3 +29,6 @@ version | versionsuffix | toolchain ``7.4.1`` | ``-centos8_x86_64`` | ``system`` ``7.4.1`` | ``-ubuntu20_amd64`` | ``system`` ``7.4.1`` | ``-ubuntu22_amd64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FreeTDS.md b/docs/version-specific/supported-software/f/FreeTDS.md index 0c0c20506..f3500fdea 100644 --- a/docs/version-specific/supported-software/f/FreeTDS.md +++ b/docs/version-specific/supported-software/f/FreeTDS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FreeTDS FreeTDS is a set of libraries for Unix and Linux that allows your programs to natively talk to Microsoft SQL Server and Sybase databases. @@ -7,3 +11,6 @@ FreeTDS is a set of libraries for Unix and Linux that allows your programs to n version | toolchain --------|---------- ``1.3.3`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FreeXL.md b/docs/version-specific/supported-software/f/FreeXL.md index 723633b68..1733c3e2a 100644 --- a/docs/version-specific/supported-software/f/FreeXL.md +++ b/docs/version-specific/supported-software/f/FreeXL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FreeXL FreeXL is an open source library to extract valid data from within an Excel (.xls) spreadsheet. @@ -13,3 +17,6 @@ version | toolchain ``1.0.5`` | ``GCCcore/8.2.0`` ``1.0.5`` | ``GCCcore/8.3.0`` ``1.0.6`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FriBidi.md b/docs/version-specific/supported-software/f/FriBidi.md index 4a3c49d02..7d2aaa448 100644 --- a/docs/version-specific/supported-software/f/FriBidi.md +++ b/docs/version-specific/supported-software/f/FriBidi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FriBidi FriBidi is a free implementation of the Unicode Bidirectional (BiDi) Algorithm. It also provides utility functions to aid in the development of interactive editors and widgets that implement BiDi functionality. The BiDi algorithm is a prerequisite for supporting right-to-left scripts such as Hebrew, Arabic, Syriac, and Thaana. @@ -20,3 +24,6 @@ version | toolchain ``1.0.5`` | ``GCCcore/8.2.0`` ``1.0.5`` | ``GCCcore/8.3.0`` ``1.0.9`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FuSeq.md b/docs/version-specific/supported-software/f/FuSeq.md index 6facf4e82..3a4d51eca 100644 --- a/docs/version-specific/supported-software/f/FuSeq.md +++ b/docs/version-specific/supported-software/f/FuSeq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FuSeq FuSeq is a novel method to discover fusion genes from paired-end RNA sequencing data. @@ -7,3 +11,6 @@ FuSeq is a novel method to discover fusion genes from paired-end RNA sequencing version | toolchain --------|---------- ``1.1.2`` | ``gompi/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/Fujitsu.md b/docs/version-specific/supported-software/f/Fujitsu.md index a7cce8844..da3caf880 100644 --- a/docs/version-specific/supported-software/f/Fujitsu.md +++ b/docs/version-specific/supported-software/f/Fujitsu.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Fujitsu Toolchain using Fujitsu compilers and libraries. @@ -7,3 +11,6 @@ Toolchain using Fujitsu compilers and libraries. version | toolchain --------|---------- ``21.05`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FunGAP.md b/docs/version-specific/supported-software/f/FunGAP.md index f2fb6aa7b..03395ca6d 100644 --- a/docs/version-specific/supported-software/f/FunGAP.md +++ b/docs/version-specific/supported-software/f/FunGAP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FunGAP Fungal Genome Annotation Pipeline using evidence-based gene model evaluation. @@ -7,3 +11,6 @@ Fungal Genome Annotation Pipeline using evidence-based gene model evaluation. version | toolchain --------|---------- ``1.1.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/FusionCatcher.md b/docs/version-specific/supported-software/f/FusionCatcher.md index 90d58140a..5f5a0b8dc 100644 --- a/docs/version-specific/supported-software/f/FusionCatcher.md +++ b/docs/version-specific/supported-software/f/FusionCatcher.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # FusionCatcher FusionCatcher searches for novel/known somatic fusion genes, translocations, and chimeras in RNA-seq data (paired-end or single-end reads from Illumina NGS platforms like Solexa/HiSeq/NextSeq/MiSeq/MiniSeq) from diseased samples. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.20`` | ``-Python-2.7.16`` | ``foss/2019b`` ``1.30`` | ``-Python-2.7.16`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/f90cache.md b/docs/version-specific/supported-software/f/f90cache.md index 08b13ee96..acd53f170 100644 --- a/docs/version-specific/supported-software/f/f90cache.md +++ b/docs/version-specific/supported-software/f/f90cache.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # f90cache f90cache is a compiler cache. It acts as a caching pre-processor to Fortran compilers, using the -E compiler switch and a hash to detect when a compilation can be satisfied from cache. This often results in a great speedup in common compilations. @@ -7,3 +11,6 @@ f90cache is a compiler cache. It acts as a caching pre-processor to Fortran comp version | toolchain --------|---------- ``0.96`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/f90nml.md b/docs/version-specific/supported-software/f/f90nml.md index 8da84cf70..4233dd307 100644 --- a/docs/version-specific/supported-software/f/f90nml.md +++ b/docs/version-specific/supported-software/f/f90nml.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # f90nml A Python module and command line tool for parsing Fortran namelist files @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.4.4`` | ``GCCcore/12.2.0`` ``1.4.4`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/f90wrap.md b/docs/version-specific/supported-software/f/f90wrap.md index 264288269..b8e7c4783 100644 --- a/docs/version-specific/supported-software/f/f90wrap.md +++ b/docs/version-specific/supported-software/f/f90wrap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # f90wrap f90wrap is a tool to automatically generate Python extension modules which interface to Fortran code that makes use of derived types. It builds on the capabilities of the popular f2py utility by generating a simpler Fortran 90 interface to the original Fortran code which is then suitable for wrapping with f2py, together with a higher-level Pythonic wrapper that makes the existance of an additional layer transparent to the final user. @@ -9,3 +13,6 @@ version | toolchain ``0.2.11`` | ``foss/2022a`` ``0.2.13`` | ``foss/2023a`` ``0.2.8`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/faceswap.md b/docs/version-specific/supported-software/f/faceswap.md index ff53ba39c..46bcaf17c 100644 --- a/docs/version-specific/supported-software/f/faceswap.md +++ b/docs/version-specific/supported-software/f/faceswap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # faceswap Faceswap is a tool that utilizes deep learning to recognize and swap faces in pictures and videos. @@ -7,3 +11,6 @@ Faceswap is a tool that utilizes deep learning to recognize and swap faces in pi version | versionsuffix | toolchain --------|---------------|---------- ``20180212`` | ``-Python-3.6.3`` | ``foss/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fast5.md b/docs/version-specific/supported-software/f/fast5.md index 1fbb9c31d..d616f47c2 100644 --- a/docs/version-specific/supported-software/f/fast5.md +++ b/docs/version-specific/supported-software/f/fast5.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fast5 A lightweight C++ library for accessing Oxford Nanopore Technologies sequencing data. @@ -7,3 +11,6 @@ A lightweight C++ library for accessing Oxford Nanopore Technologies sequencing version | toolchain --------|---------- ``0.6.5`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fastPHASE.md b/docs/version-specific/supported-software/f/fastPHASE.md index 7dd21a08b..126283084 100644 --- a/docs/version-specific/supported-software/f/fastPHASE.md +++ b/docs/version-specific/supported-software/f/fastPHASE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fastPHASE fastPHASE: software for haplotype reconstruction, and estimating missing genotypes from population data Documentation: http://scheet.org/code/fastphase_doc_1.4.pdf @@ -7,3 +11,6 @@ fastPHASE: software for haplotype reconstruction, and estimating missing genoty version | toolchain --------|---------- ``1.4.8`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fastStructure.md b/docs/version-specific/supported-software/f/fastStructure.md index 8944d53f2..dbd2b9a21 100644 --- a/docs/version-specific/supported-software/f/fastStructure.md +++ b/docs/version-specific/supported-software/f/fastStructure.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fastStructure fastStructure is an algorithm for inferring population structure from large SNP genotype data. It is based on a variational Bayesian framework for posterior inference and is written in Python2.x. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.0`` | ``-Python-2.7.12`` | ``foss/2016b`` ``1.0`` | ``-Python-2.7.13`` | ``foss/2017a`` ``1.0`` | ``-Python-2.7.15`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fasta-reader.md b/docs/version-specific/supported-software/f/fasta-reader.md index 88308364f..2f1d59dad 100644 --- a/docs/version-specific/supported-software/f/fasta-reader.md +++ b/docs/version-specific/supported-software/f/fasta-reader.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fasta-reader FASTA file reader @@ -7,3 +11,6 @@ FASTA file reader version | toolchain --------|---------- ``3.0.2`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fastahack.md b/docs/version-specific/supported-software/f/fastahack.md index f6b05cbc8..43216578a 100644 --- a/docs/version-specific/supported-software/f/fastahack.md +++ b/docs/version-specific/supported-software/f/fastahack.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fastahack Utilities for indexing and sequence extraction from FASTA files. @@ -12,3 +16,6 @@ version | toolchain ``1.0.0`` | ``GCCcore/11.3.0`` ``1.0.0`` | ``GCCcore/12.3.0`` ``1.0.0`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fastai.md b/docs/version-specific/supported-software/f/fastai.md index df3600ef8..c23bb5384 100644 --- a/docs/version-specific/supported-software/f/fastai.md +++ b/docs/version-specific/supported-software/f/fastai.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fastai The fastai deep learning library. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.7.10`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``2.7.10`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fastjet-contrib.md b/docs/version-specific/supported-software/f/fastjet-contrib.md index 214da1462..9a7b576d5 100644 --- a/docs/version-specific/supported-software/f/fastjet-contrib.md +++ b/docs/version-specific/supported-software/f/fastjet-contrib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fastjet-contrib 3rd party extensions of FastJet @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.049`` | ``gompi/2022a`` ``1.053`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fastjet.md b/docs/version-specific/supported-software/f/fastjet.md index 7a8ff5fd4..dc98df478 100644 --- a/docs/version-specific/supported-software/f/fastjet.md +++ b/docs/version-specific/supported-software/f/fastjet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fastjet A software package for jet finding in pp and e+e- collisions @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.4.0`` | ``gompi/2022a`` ``3.4.2`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fastml.md b/docs/version-specific/supported-software/f/fastml.md index 798a28cac..de8ebc930 100644 --- a/docs/version-specific/supported-software/f/fastml.md +++ b/docs/version-specific/supported-software/f/fastml.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fastml Maximum likelihood reconstruction of ancestral amino-acid sequences. A branch-and-bound algorithm for the inference of ancestral amino-acid sequences when the replacement rate varies among sites. @@ -7,3 +11,6 @@ Maximum likelihood reconstruction of ancestral amino-acid sequences. A branch-an version | toolchain --------|---------- ``2.3`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fastp.md b/docs/version-specific/supported-software/f/fastp.md index cad968d05..a7bb64b46 100644 --- a/docs/version-specific/supported-software/f/fastp.md +++ b/docs/version-specific/supported-software/f/fastp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fastp A tool designed to provide fast all-in-one preprocessing for FastQ files. This tool is developed in C++ with multithreading supported to afford high performance. @@ -16,3 +20,6 @@ version | toolchain ``0.23.2`` | ``GCC/11.3.0`` ``0.23.4`` | ``GCC/12.2.0`` ``0.23.4`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fastparquet.md b/docs/version-specific/supported-software/f/fastparquet.md index 4483a41f2..b28d14efa 100644 --- a/docs/version-specific/supported-software/f/fastparquet.md +++ b/docs/version-specific/supported-software/f/fastparquet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fastparquet fastparquet is a python implementation of the parquet format, aiming to integrate into python-based big data work-flows. It is used implicitly by the projects Dask, Pandas and intake-parquet. @@ -9,3 +13,6 @@ version | toolchain ``0.7.2`` | ``foss/2021a`` ``0.8.0`` | ``foss/2021b`` ``2023.4.0`` | ``gfbf/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fastq-pair.md b/docs/version-specific/supported-software/f/fastq-pair.md index 4bd79117c..1acd12764 100644 --- a/docs/version-specific/supported-software/f/fastq-pair.md +++ b/docs/version-specific/supported-software/f/fastq-pair.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fastq-pair Match up paired end fastq files quickly and efficiently. @@ -7,3 +11,6 @@ Match up paired end fastq files quickly and efficiently. version | toolchain --------|---------- ``1.0`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fastq-tools.md b/docs/version-specific/supported-software/f/fastq-tools.md index 38167a9c8..ae730fb12 100644 --- a/docs/version-specific/supported-software/f/fastq-tools.md +++ b/docs/version-specific/supported-software/f/fastq-tools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fastq-tools This package provides a number of small and efficient programs to perform common tasks with high throughput sequencing data in the FASTQ format. All of the programs work with typical FASTQ files as well as gzipped FASTQ files. @@ -10,3 +14,6 @@ version | toolchain ``0.8`` | ``foss/2018b`` ``0.8.3`` | ``GCC/10.3.0`` ``0.8.3`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fastqsplitter.md b/docs/version-specific/supported-software/f/fastqsplitter.md index bf00a9bc1..06e86bc75 100644 --- a/docs/version-specific/supported-software/f/fastqsplitter.md +++ b/docs/version-specific/supported-software/f/fastqsplitter.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fastqsplitter Splits fastq files evenly. @@ -7,3 +11,6 @@ Splits fastq files evenly. version | versionsuffix | toolchain --------|---------------|---------- ``1.2.0`` | ``-Python-3.7.2`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fastqz.md b/docs/version-specific/supported-software/f/fastqz.md index 975581e22..8490f1688 100644 --- a/docs/version-specific/supported-software/f/fastqz.md +++ b/docs/version-specific/supported-software/f/fastqz.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fastqz fastqz is a compressor for FASTQ files. FASTQ is the output of DNA sequencing machines. It is one of the compressors described in the paper: Bonfield JK, Mahoney MV (2013) Compression of FASTQ and SAM Format Sequencing Data. (mirror) PLoS ONE 8(3): e59190. doi:10.1371/journal.pone.0059190 @@ -7,3 +11,6 @@ fastqz is a compressor for FASTQ files. FASTQ is the output of DNA sequencing ma version | toolchain --------|---------- ``1.5`` | ``GCC/4.8.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fatslim.md b/docs/version-specific/supported-software/f/fatslim.md index 6d5b16094..3fbebb9a1 100644 --- a/docs/version-specific/supported-software/f/fatslim.md +++ b/docs/version-specific/supported-software/f/fatslim.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fatslim FATSLiM stands for “Fast Analysis Toolbox for Simulations of Lipid Membranes” and its goal is to provide an efficient, yet robust, tool to extract physical parameters from MD trajectories. @@ -7,3 +11,6 @@ FATSLiM stands for “Fast Analysis Toolbox for Simulations of Lipid Membranes version | versionsuffix | toolchain --------|---------------|---------- ``0.2.1`` | ``-Python-3.6.4`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fbm.md b/docs/version-specific/supported-software/f/fbm.md index 19fbf97a3..2dbbe848a 100644 --- a/docs/version-specific/supported-software/f/fbm.md +++ b/docs/version-specific/supported-software/f/fbm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fbm Exact methods for simulating fractional Brownian motion and fractional Gaussian noise in Python @@ -7,3 +11,6 @@ Exact methods for simulating fractional Brownian motion and fractional Gaussian version | versionsuffix | toolchain --------|---------------|---------- ``0.2.0`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fdict.md b/docs/version-specific/supported-software/f/fdict.md index 7a58c7a51..55c9f4e4e 100644 --- a/docs/version-specific/supported-software/f/fdict.md +++ b/docs/version-specific/supported-software/f/fdict.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fdict A variable and dictionary in pure fortran for retaining any data-type and a fast hash-table dictionary. @@ -12,3 +16,6 @@ version | toolchain ``0.8.0`` | ``iccifort/2020.4.304`` ``0.8.0`` | ``intel-compilers/2021.2.0`` ``0.8.0`` | ``intel-compilers/2021.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fdstools.md b/docs/version-specific/supported-software/f/fdstools.md index 4428e2d33..3e27d3e47 100644 --- a/docs/version-specific/supported-software/f/fdstools.md +++ b/docs/version-specific/supported-software/f/fdstools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fdstools Forensic DNA Sequencing Tools Tools for characterisation and filtering of PCR stutter artefacts and other systemic noise in Next Generation Sequencing data of forensic STR markers. @@ -7,3 +11,6 @@ Forensic DNA Sequencing Tools Tools for characterisation and filtering of PCR st version | versionsuffix | toolchain --------|---------------|---------- ``20160322`` | ``-Python-2.7.11`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/feh.md b/docs/version-specific/supported-software/f/feh.md index b027e15f4..434cfcd13 100644 --- a/docs/version-specific/supported-software/f/feh.md +++ b/docs/version-specific/supported-software/f/feh.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # feh feh is an X11 image viewer aimed mostly at console users. Unlike most other viewers, it does not have a fancy GUI, but simply displays images. It is controlled via commandline arguments and configurable key/mouse actions. @@ -7,3 +11,6 @@ feh is an X11 image viewer aimed mostly at console users. Unlike most other view version | toolchain --------|---------- ``2.26`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fermi-lite.md b/docs/version-specific/supported-software/f/fermi-lite.md index 6a6141239..74dd8db25 100644 --- a/docs/version-specific/supported-software/f/fermi-lite.md +++ b/docs/version-specific/supported-software/f/fermi-lite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fermi-lite Standalone C library for assembling Illumina short reads in small regions. @@ -11,3 +15,6 @@ version | toolchain ``20190320`` | ``GCCcore/11.2.0`` ``20190320`` | ``GCCcore/12.3.0`` ``20190320`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/festival.md b/docs/version-specific/supported-software/f/festival.md index a2f823b5e..5ff2dc8f1 100644 --- a/docs/version-specific/supported-software/f/festival.md +++ b/docs/version-specific/supported-software/f/festival.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # festival University of Edinburgh's Festival Speech Synthesis Systems is a free software multi-lingual speech synthesis workbench that runs on multiple-platforms offering black box text to speech, as well as an open architecture for research in speech synthesis. It designed as a component of large speech technology systems. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.5.0`` | ``GCCcore/12.3.0`` ``2.5.0`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fetchMG.md b/docs/version-specific/supported-software/f/fetchMG.md index fcfa1c267..8f1d0c9f6 100644 --- a/docs/version-specific/supported-software/f/fetchMG.md +++ b/docs/version-specific/supported-software/f/fetchMG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fetchMG The program “fetchMG” was written to extract the 40 MGs from genomes and metagenomes in an easy and accurate manner. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0`` | ``GCCcore/8.3.0`` ``1.0`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/ffmpi.md b/docs/version-specific/supported-software/f/ffmpi.md index 50676b93a..8eaa2ecd8 100644 --- a/docs/version-specific/supported-software/f/ffmpi.md +++ b/docs/version-specific/supported-software/f/ffmpi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ffmpi Fujitsu Compiler based compiler toolchain, including Fujitsu MPI for MPI support. @@ -7,3 +11,6 @@ Fujitsu Compiler based compiler toolchain, including Fujitsu MPI for MPI support version | toolchain --------|---------- ``4.5.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/ffnet.md b/docs/version-specific/supported-software/f/ffnet.md index 0f65435bd..ebf499e2f 100644 --- a/docs/version-specific/supported-software/f/ffnet.md +++ b/docs/version-specific/supported-software/f/ffnet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ffnet Feed-forward neural network solution for python @@ -7,3 +11,6 @@ Feed-forward neural network solution for python version | versionsuffix | toolchain --------|---------------|---------- ``0.8.3`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/ffnvcodec.md b/docs/version-specific/supported-software/f/ffnvcodec.md index c77a892bc..d99b83907 100644 --- a/docs/version-specific/supported-software/f/ffnvcodec.md +++ b/docs/version-specific/supported-software/f/ffnvcodec.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ffnvcodec FFmpeg nvidia headers. Adds support for nvenc and nvdec. Requires Nvidia GPU and drivers to be present (picked up dynamically). @@ -9,3 +13,6 @@ version | toolchain ``11.1.5.2`` | ``system`` ``12.0.16.0`` | ``system`` ``12.1.14.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fftlib.md b/docs/version-specific/supported-software/f/fftlib.md index a22443a33..0f5860a39 100644 --- a/docs/version-specific/supported-software/f/fftlib.md +++ b/docs/version-specific/supported-software/f/fftlib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fftlib A library that intercepts FFTW calls and adds features on top of it. In particular, it enables FFT plan reuse when there are multiple calls for the same geometry. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20170628`` | ``gompi/2020b`` ``20170628`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fgbio.md b/docs/version-specific/supported-software/f/fgbio.md index 23017e189..f03418e21 100644 --- a/docs/version-specific/supported-software/f/fgbio.md +++ b/docs/version-specific/supported-software/f/fgbio.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fgbio A set of tools to analyze genomic data with a focus on Next Generation Sequencing. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.3.0`` | | ``system`` ``2.2.1`` | ``-Java-8`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/file.md b/docs/version-specific/supported-software/f/file.md index bac703458..b3dc8baa2 100644 --- a/docs/version-specific/supported-software/f/file.md +++ b/docs/version-specific/supported-software/f/file.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # file The file command is 'a file type guesser', that is, a command-line tool that tells you in words what kind of data a file contains. @@ -20,3 +24,6 @@ version | toolchain ``5.43`` | ``GCCcore/11.3.0`` ``5.43`` | ``GCCcore/12.2.0`` ``5.43`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/filevercmp.md b/docs/version-specific/supported-software/f/filevercmp.md index 66db11da2..8a23fe791 100644 --- a/docs/version-specific/supported-software/f/filevercmp.md +++ b/docs/version-specific/supported-software/f/filevercmp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # filevercmp filevercmp function as in sort --version-sort. @@ -12,3 +16,6 @@ version | toolchain ``20191210`` | ``GCCcore/11.2.0`` ``20191210`` | ``GCCcore/11.3.0`` ``20191210`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/find_circ.md b/docs/version-specific/supported-software/f/find_circ.md index fb7ef7942..0499bf0c9 100644 --- a/docs/version-specific/supported-software/f/find_circ.md +++ b/docs/version-specific/supported-software/f/find_circ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # find_circ circRNA detection from RNA-seq reads @@ -7,3 +11,6 @@ circRNA detection from RNA-seq reads version | versionsuffix | toolchain --------|---------------|---------- ``1.2-20170228`` | ``-Python-2.7.14`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/finder.md b/docs/version-specific/supported-software/f/finder.md index 5752134c4..62c747eb9 100644 --- a/docs/version-specific/supported-software/f/finder.md +++ b/docs/version-specific/supported-software/f/finder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # finder finder is a gene annotator pipeline which automates the process of downloading short reads, aligning them and using the assembled transcripts to generate gene annotations. @@ -7,3 +11,6 @@ finder is a gene annotator pipeline which automates the process of downloading s version | toolchain --------|---------- ``1.1.0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/findhap.md b/docs/version-specific/supported-software/f/findhap.md index ee724037b..8b2df0d72 100644 --- a/docs/version-specific/supported-software/f/findhap.md +++ b/docs/version-specific/supported-software/f/findhap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # findhap Find haplotypes and impute genotypes using multiple chip sets and sequence data @@ -7,3 +11,6 @@ Find haplotypes and impute genotypes using multiple chip sets and sequence data version | toolchain --------|---------- ``4`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/findutils.md b/docs/version-specific/supported-software/f/findutils.md index c7f6377a3..4cd8631cd 100644 --- a/docs/version-specific/supported-software/f/findutils.md +++ b/docs/version-specific/supported-software/f/findutils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # findutils findutils: The GNU find, locate, updatedb, and xargs utilities @@ -7,3 +11,6 @@ findutils: The GNU find, locate, updatedb, and xargs utilities version | toolchain --------|---------- ``4.4.2`` | ``GCC/4.8.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fineRADstructure.md b/docs/version-specific/supported-software/f/fineRADstructure.md index 688fac4fd..bf99ac7c4 100644 --- a/docs/version-specific/supported-software/f/fineRADstructure.md +++ b/docs/version-specific/supported-software/f/fineRADstructure.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fineRADstructure A package for population structure inference from RAD-seq data @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20180709`` | ``intel/2018a`` ``20210514`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fineSTRUCTURE.md b/docs/version-specific/supported-software/f/fineSTRUCTURE.md index a90a2cf6b..848e66ee0 100644 --- a/docs/version-specific/supported-software/f/fineSTRUCTURE.md +++ b/docs/version-specific/supported-software/f/fineSTRUCTURE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fineSTRUCTURE fineSTRUCTURE is a fast and powerful algorithm for identifying population structure using dense sequencing data. @@ -7,3 +11,6 @@ fineSTRUCTURE is a fast and powerful algorithm for identifying population struct version | toolchain --------|---------- ``2.1.3`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fio.md b/docs/version-specific/supported-software/f/fio.md index 25742449b..1916c9ac1 100644 --- a/docs/version-specific/supported-software/f/fio.md +++ b/docs/version-specific/supported-software/f/fio.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fio Flexible I/O tester @@ -10,3 +14,6 @@ version | toolchain ``3.32`` | ``GCCcore/11.3.0`` ``3.34`` | ``GCCcore/12.2.0`` ``3.36`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fixesproto.md b/docs/version-specific/supported-software/f/fixesproto.md index f402c1a69..d7c777af0 100644 --- a/docs/version-specific/supported-software/f/fixesproto.md +++ b/docs/version-specific/supported-software/f/fixesproto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fixesproto X.org FixesProto protocol headers. @@ -9,3 +13,6 @@ version | toolchain ``5.0`` | ``foss/2016a`` ``5.0`` | ``gimkl/2.11.5`` ``5.0`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/flair-NLP.md b/docs/version-specific/supported-software/f/flair-NLP.md index 2461fadf3..101ff9e00 100644 --- a/docs/version-specific/supported-software/f/flair-NLP.md +++ b/docs/version-specific/supported-software/f/flair-NLP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # flair-NLP A very simple framework for state-of-the-art NLP @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.11.3`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``0.11.3`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/flatbuffers-python.md b/docs/version-specific/supported-software/f/flatbuffers-python.md index b382aa919..6f78c7339 100644 --- a/docs/version-specific/supported-software/f/flatbuffers-python.md +++ b/docs/version-specific/supported-software/f/flatbuffers-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # flatbuffers-python Python Flatbuffers runtime library. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``2.0`` | | ``GCCcore/11.3.0`` ``23.1.4`` | | ``GCCcore/12.2.0`` ``23.5.26`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/flatbuffers.md b/docs/version-specific/supported-software/f/flatbuffers.md index 9401cbf06..723ac6947 100644 --- a/docs/version-specific/supported-software/f/flatbuffers.md +++ b/docs/version-specific/supported-software/f/flatbuffers.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # flatbuffers FlatBuffers: Memory Efficient Serialization Library @@ -16,3 +20,6 @@ version | toolchain ``23.1.4`` | ``GCCcore/12.2.0`` ``23.5.26`` | ``GCCcore/12.3.0`` ``23.5.26`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/flex.md b/docs/version-specific/supported-software/f/flex.md index 3cd905989..c4e11ff89 100644 --- a/docs/version-specific/supported-software/f/flex.md +++ b/docs/version-specific/supported-software/f/flex.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # flex Flex (Fast Lexical Analyzer) is a tool for generating scanners. A scanner, sometimes called a tokenizer, is a program which recognizes lexical patterns in text. @@ -80,3 +84,6 @@ version | toolchain ``2.6.4`` | ``GCCcore/9.5.0`` ``2.6.4`` | ``GCCcore/system`` ``2.6.4`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/flit.md b/docs/version-specific/supported-software/f/flit.md index fc03e6871..36bd761ab 100644 --- a/docs/version-specific/supported-software/f/flit.md +++ b/docs/version-specific/supported-software/f/flit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # flit A simple packaging tool for simple packages. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.9.0`` | ``GCCcore/12.3.0`` ``3.9.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/flook.md b/docs/version-specific/supported-software/f/flook.md index 87d6d8f2b..08a3c3700 100644 --- a/docs/version-specific/supported-software/f/flook.md +++ b/docs/version-specific/supported-software/f/flook.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # flook The fortran-Lua-hook library. @@ -13,3 +17,6 @@ version | toolchain ``0.8.1`` | ``iccifort/2020.4.304`` ``0.8.1`` | ``intel-compilers/2021.2.0`` ``0.8.1`` | ``intel-compilers/2021.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/flowFDA.md b/docs/version-specific/supported-software/f/flowFDA.md index 765675f1e..d41ca542d 100644 --- a/docs/version-specific/supported-software/f/flowFDA.md +++ b/docs/version-specific/supported-software/f/flowFDA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # flowFDA R package for analysing flow cytometry experiments with model based clustering, functional principal component analysis @@ -7,3 +11,6 @@ R package for analysing flow cytometry experiments with model based clustering, version | versionsuffix | toolchain --------|---------------|---------- ``0.99-20220602`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fmt.md b/docs/version-specific/supported-software/f/fmt.md index b02959997..4be6321cb 100644 --- a/docs/version-specific/supported-software/f/fmt.md +++ b/docs/version-specific/supported-software/f/fmt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fmt fmt (formerly cppformat) is an open-source formatting library. @@ -21,3 +25,6 @@ version | toolchain ``8.1.1`` | ``GCCcore/11.2.0`` ``9.1.0`` | ``GCCcore/11.3.0`` ``9.1.0`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fontconfig.md b/docs/version-specific/supported-software/f/fontconfig.md index 34b611795..bee1f2137 100644 --- a/docs/version-specific/supported-software/f/fontconfig.md +++ b/docs/version-specific/supported-software/f/fontconfig.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fontconfig Fontconfig is a library designed to provide system-wide font configuration, customization and application access. @@ -31,3 +35,6 @@ version | versionsuffix | toolchain ``2.14.2`` | | ``GCCcore/12.3.0`` ``2.14.2`` | | ``GCCcore/13.2.0`` ``2.15.0`` | | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fontsproto.md b/docs/version-specific/supported-software/f/fontsproto.md index bf4e10f9c..7835fd625 100644 --- a/docs/version-specific/supported-software/f/fontsproto.md +++ b/docs/version-specific/supported-software/f/fontsproto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fontsproto X11 font extension wire protocol @@ -9,3 +13,6 @@ version | toolchain ``2.1.3`` | ``foss/2016a`` ``2.1.3`` | ``gimkl/2.11.5`` ``2.1.3`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/forbear.md b/docs/version-specific/supported-software/f/forbear.md index beafbde27..b7ba4da8f 100644 --- a/docs/version-specific/supported-software/f/forbear.md +++ b/docs/version-specific/supported-software/f/forbear.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # forbear A Fortran Library for building and running fancy progress bar @@ -7,3 +11,6 @@ A Fortran Library for building and running fancy progress bar version | toolchain --------|---------- ``1.2.0`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/foss.md b/docs/version-specific/supported-software/f/foss.md index 5081ab9bb..414597707 100644 --- a/docs/version-specific/supported-software/f/foss.md +++ b/docs/version-specific/supported-software/f/foss.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # foss GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK. @@ -31,3 +35,6 @@ version | toolchain ``2023a`` | ``system`` ``2023b`` | ``system`` ``2024.05`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fosscuda.md b/docs/version-specific/supported-software/f/fosscuda.md index 289539a2c..3193e1024 100644 --- a/docs/version-specific/supported-software/f/fosscuda.md +++ b/docs/version-specific/supported-software/f/fosscuda.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fosscuda GCC based compiler toolchain __with CUDA support__, and including OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK. @@ -13,3 +17,6 @@ version | toolchain ``2019b`` | ``system`` ``2020a`` | ``system`` ``2020b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fplll.md b/docs/version-specific/supported-software/f/fplll.md index b36b0b6a4..fc817e2cd 100644 --- a/docs/version-specific/supported-software/f/fplll.md +++ b/docs/version-specific/supported-software/f/fplll.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fplll fplll contains implementations of several lattice algorithms. The implementation relies on floating-point orthogonalization, and the 1982 paper from Lenstra, Lenstra Jr. and Lovasz (LLL) is central to the code, hence the name. @@ -7,3 +11,6 @@ fplll contains implementations of several lattice algorithms. The implementatio version | toolchain --------|---------- ``5.4.5`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fpocket.md b/docs/version-specific/supported-software/f/fpocket.md index eba998e24..883c65b8d 100644 --- a/docs/version-specific/supported-software/f/fpocket.md +++ b/docs/version-specific/supported-software/f/fpocket.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fpocket The fpocket suite of programs is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scientific community willing to develop new scoring functions and extract pocket descriptors on a large scale level. @@ -7,3 +11,6 @@ The fpocket suite of programs is a very fast open source protein pocket detectio version | toolchain --------|---------- ``3.1.4.2`` | ``gompi/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fpylll.md b/docs/version-specific/supported-software/f/fpylll.md index 0c775296b..732bf92ec 100644 --- a/docs/version-specific/supported-software/f/fpylll.md +++ b/docs/version-specific/supported-software/f/fpylll.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fpylll A Python wrapper for fplll. @@ -7,3 +11,6 @@ A Python wrapper for fplll. version | toolchain --------|---------- ``0.5.9`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fqtrim.md b/docs/version-specific/supported-software/f/fqtrim.md index 39b6da77b..91ddfd383 100644 --- a/docs/version-specific/supported-software/f/fqtrim.md +++ b/docs/version-specific/supported-software/f/fqtrim.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fqtrim fqtrim is a versatile stand-alone utility that can be used to trim adapters, poly-A tails, terminal unknown bases (Ns) and low quality 3' regions in reads from high-throughput next-generation sequencing machines. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.9.4`` | ``intel/2016b`` ``0.9.5`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fqzcomp.md b/docs/version-specific/supported-software/f/fqzcomp.md index 9885d8560..9f91f99e1 100644 --- a/docs/version-specific/supported-software/f/fqzcomp.md +++ b/docs/version-specific/supported-software/f/fqzcomp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fqzcomp Fqzcomp is a basic fastq compressor, designed primarily for high performance. Despite that it is comparable to bzip2 for compression levels. @@ -7,3 +11,6 @@ Fqzcomp is a basic fastq compressor, designed primarily for high performance. D version | toolchain --------|---------- ``4.6`` | ``GCC/4.8.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/freebayes.md b/docs/version-specific/supported-software/f/freebayes.md index 4b2978e3a..e50f45184 100644 --- a/docs/version-specific/supported-software/f/freebayes.md +++ b/docs/version-specific/supported-software/f/freebayes.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # freebayes Bayesian haplotype-based genetic polymorphism discovery and genotyping. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``1.3.6`` | ``-R-4.1.0`` | ``foss/2021a`` ``1.3.6`` | ``-R-4.1.2`` | ``foss/2021b`` ``1.3.7`` | ``-R-4.3.2`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/freeglut.md b/docs/version-specific/supported-software/f/freeglut.md index a5db24d87..e9907b23c 100644 --- a/docs/version-specific/supported-software/f/freeglut.md +++ b/docs/version-specific/supported-software/f/freeglut.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # freeglut freeglut is a completely OpenSourced alternative to the OpenGL Utility Toolkit (GLUT) library. @@ -27,3 +31,6 @@ version | versionsuffix | toolchain ``3.2.2`` | | ``GCCcore/11.3.0`` ``3.4.0`` | | ``GCCcore/12.2.0`` ``3.4.0`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/freetype-py.md b/docs/version-specific/supported-software/f/freetype-py.md index f68fe0bbd..518623017 100644 --- a/docs/version-specific/supported-software/f/freetype-py.md +++ b/docs/version-specific/supported-software/f/freetype-py.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # freetype-py Python binding for the freetype library @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.2.0`` | ``-Python-3.7.4`` | ``GCCcore/8.3.0`` ``2.4.0`` | | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/freetype.md b/docs/version-specific/supported-software/f/freetype.md index b867a7790..84a073163 100644 --- a/docs/version-specific/supported-software/f/freetype.md +++ b/docs/version-specific/supported-software/f/freetype.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # freetype FreeType 2 is a software font engine that is designed to be small, efficient, highly customizable, and portable while capable of producing high-quality output (glyph images). It can be used in graphics libraries, display servers, font conversion tools, text image generation tools, and many other products as well. @@ -37,3 +41,6 @@ version | versionsuffix | toolchain ``2.9`` | | ``GCCcore/6.4.0`` ``2.9.1`` | | ``GCCcore/7.3.0`` ``2.9.1`` | | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/freud-analysis.md b/docs/version-specific/supported-software/f/freud-analysis.md index 97d735fd5..e3f8f2298 100644 --- a/docs/version-specific/supported-software/f/freud-analysis.md +++ b/docs/version-specific/supported-software/f/freud-analysis.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # freud-analysis The freud Python library provides a simple, flexible, powerful set of tools for analyzing trajectories obtained from molecular dynamics or Monte Carlo simulations. High performance, parallelized C++ is used to compute standard tools such as radial distribution functions, correlation functions, order parameters, and clusters, as well as original analysis methods including potentials of mean force and torque (PMFTs) and local environment matching. The freud library supports many input formats and outputs NumPy arrays, enabling integration with the scientific Python ecosystem for many typical materials science workflows. @@ -7,3 +11,6 @@ The freud Python library provides a simple, flexible, powerful set of tools for version | toolchain --------|---------- ``2.6.2`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fsom.md b/docs/version-specific/supported-software/f/fsom.md index 07e1e3f81..b2c1b501b 100644 --- a/docs/version-specific/supported-software/f/fsom.md +++ b/docs/version-specific/supported-software/f/fsom.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fsom A tiny C library for managing SOM (Self-Organizing Maps) neural networks. @@ -12,3 +16,6 @@ version | toolchain ``20141119`` | ``GCCcore/9.3.0`` ``20151117`` | ``GCCcore/11.3.0`` ``20151117`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/ftfy.md b/docs/version-specific/supported-software/f/ftfy.md index 91bc92a2f..2df652068 100644 --- a/docs/version-specific/supported-software/f/ftfy.md +++ b/docs/version-specific/supported-software/f/ftfy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ftfy ftfy (fixes text for you) fixes Unicode that’s broken in various ways. The goal of ftfy is to take in bad Unicode and output good Unicode, for use in your Unicode-aware code. This is different from taking in non-Unicode and outputting Unicode, which is not a goal of ftfy. It also isn’t designed to protect you from having to write Unicode-aware code. ftfy helps those who help themselves. @@ -7,3 +11,6 @@ ftfy (fixes text for you) fixes Unicode that’s broken in various ways. The goa version | toolchain --------|---------- ``6.1.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fugue.md b/docs/version-specific/supported-software/f/fugue.md index 798a891cc..2efa0d3e4 100644 --- a/docs/version-specific/supported-software/f/fugue.md +++ b/docs/version-specific/supported-software/f/fugue.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fugue Fugue is a unified interface for distributed computing that lets users execute Python, Pandas, and SQL code on Spark, Dask, and Ray with minimal rewrites. Fugue is most commonly used for: Parallelizing or scaling existing Python and Pandas code by bringing it to Spark, Dask, or Ray with minimal rewrites. Using FugueSQL to define end-to-end workflows on top of Pandas, Spark, and Dask DataFrames. FugueSQL is an enhanced SQL interface that can invoke Python code. @@ -7,3 +11,6 @@ Fugue is a unified interface for distributed computing that lets users execute P version | toolchain --------|---------- ``0.8.7`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fullrmc.md b/docs/version-specific/supported-software/f/fullrmc.md index 3d8dc7142..ea0e940b8 100644 --- a/docs/version-specific/supported-software/f/fullrmc.md +++ b/docs/version-specific/supported-software/f/fullrmc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fullrmc Reverse Monte Carlo (RMC) is probably best known for its applications in condensed matter physics and solid state chemistry. fullrmc which stands for FUndamental Library Language for Reverse Monte Carlo is different than traditional RMC but a stochastic modelling method to solve an inverse problem whereby an atomic/molecular model is adjusted until its atoms position havei the greatest consistency with a set of experimental data. @@ -7,3 +11,6 @@ Reverse Monte Carlo (RMC) is probably best known for its applications in conden version | versionsuffix | toolchain --------|---------------|---------- ``3.2.0`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fumi_tools.md b/docs/version-specific/supported-software/f/fumi_tools.md index 8145133c7..0db0ebeaa 100644 --- a/docs/version-specific/supported-software/f/fumi_tools.md +++ b/docs/version-specific/supported-software/f/fumi_tools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fumi_tools This tool is intended to deduplicate UMIs from single-end and paired-end sequencing data. Reads are considered identical when their UMIs have the same sequence, they have the same length and map at the same position. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.18.2`` | | ``GCC/10.3.0`` ``0.18.2`` | | ``GCC/11.2.0`` ``0.18.2`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/funannotate.md b/docs/version-specific/supported-software/f/funannotate.md index 33c96aece..116ea8478 100644 --- a/docs/version-specific/supported-software/f/funannotate.md +++ b/docs/version-specific/supported-software/f/funannotate.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # funannotate funannotate is a pipeline for genome annotation (built specifically for fungi, but will also work with higher eukaryotes) @@ -7,3 +11,6 @@ funannotate is a pipeline for genome annotation (built specifically for fungi, b version | toolchain --------|---------- ``1.8.13`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/futhark.md b/docs/version-specific/supported-software/f/futhark.md index 97632f33f..5d9732ac3 100644 --- a/docs/version-specific/supported-software/f/futhark.md +++ b/docs/version-specific/supported-software/f/futhark.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # futhark Futhark is a small programming language designed to be compiled to efficient parallel code. It is a statically typed, data-parallel, and purely functional array language in the ML family, and comes with a heavily optimising ahead-of-time compiler that presently generates GPU code via CUDA and OpenCL, although the language itself is hardware-agnostic and can also run on multicore CPUs @@ -7,3 +11,6 @@ Futhark is a small programming language designed to be compiled to efficient par version | toolchain --------|---------- ``0.19.5`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/futile.md b/docs/version-specific/supported-software/f/futile.md index 9823386da..c4fd36af2 100644 --- a/docs/version-specific/supported-software/f/futile.md +++ b/docs/version-specific/supported-software/f/futile.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # futile The FUTILE project (Fortran Utilities for the Treatment of Innermost Level of Executables) is a set of modules and wrapper that encapsulate the most common low-level operations of a Fortran code. @@ -13,3 +17,6 @@ version | toolchain ``1.8.3`` | ``intel/2020b`` ``1.8.3`` | ``intel/2021a`` ``1.8.3`` | ``intel/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/future.md b/docs/version-specific/supported-software/f/future.md index 0807ad29c..d48b5d27b 100644 --- a/docs/version-specific/supported-software/f/future.md +++ b/docs/version-specific/supported-software/f/future.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # future python-future is the missing compatibility layer between Python 2 and Python 3. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``0.16.0`` | ``-Python-3.6.3`` | ``intel/2017b`` ``0.16.0`` | ``-Python-2.7.14`` | ``intel/2018a`` ``0.16.0`` | ``-Python-2.7.15`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/fxtract.md b/docs/version-specific/supported-software/f/fxtract.md index 7050e6410..82a54244e 100644 --- a/docs/version-specific/supported-software/f/fxtract.md +++ b/docs/version-specific/supported-software/f/fxtract.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # fxtract Extract sequences from a fastx (fasta or fastq) file given a subsequence. @@ -7,3 +11,6 @@ Extract sequences from a fastx (fasta or fastq) file given a subsequence. version | toolchain --------|---------- ``2.3`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/f/index.md b/docs/version-specific/supported-software/f/index.md index 840d152bb..92e7b5b60 100644 --- a/docs/version-specific/supported-software/f/index.md +++ b/docs/version-specific/supported-software/f/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (f) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - *f* - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [f90cache](f90cache.md) * [f90nml](f90nml.md) * [f90wrap](f90wrap.md) diff --git a/docs/version-specific/supported-software/g/G-PhoCS.md b/docs/version-specific/supported-software/g/G-PhoCS.md index f62e4aaa7..258279758 100644 --- a/docs/version-specific/supported-software/g/G-PhoCS.md +++ b/docs/version-specific/supported-software/g/G-PhoCS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # G-PhoCS G-PhoCS is a software package for inferring ancestral population sizes, population divergence times, and migration rates from individual genome sequences. G-PhoCS accepts as input a set of multiple sequence alignments from separate neutrally evolving loci along the genome. Parameter inference is done in a Bayesian manner, using a Markov Chain Monte Carlo (MCMC) to jointly sample model parameters and genealogies at the input loci. @@ -7,3 +11,6 @@ G-PhoCS is a software package for inferring ancestral population sizes, populati version | toolchain --------|---------- ``1.2.3`` | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GAMESS-US.md b/docs/version-specific/supported-software/g/GAMESS-US.md index e5e48ea43..45bfc2c5e 100644 --- a/docs/version-specific/supported-software/g/GAMESS-US.md +++ b/docs/version-specific/supported-software/g/GAMESS-US.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GAMESS-US The General Atomic and Molecular Electronic Structure System (GAMESS) is a general ab initio quantum chemistry package. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``20220930-R2`` | | ``gompi/2022a`` ``20230930-R2`` | | ``gompi/2022a`` ``20230930-R2`` | | ``intel-compilers/2022.1.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GAPPadder.md b/docs/version-specific/supported-software/g/GAPPadder.md index 94525c304..5e4c0e0b4 100644 --- a/docs/version-specific/supported-software/g/GAPPadder.md +++ b/docs/version-specific/supported-software/g/GAPPadder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GAPPadder GAPPadder is tool for closing gaps on draft genomes with short sequencing data @@ -7,3 +11,6 @@ GAPPadder is tool for closing gaps on draft genomes with short sequencing data version | versionsuffix | toolchain --------|---------------|---------- ``20170601`` | ``-Python-2.7.18`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GARLI.md b/docs/version-specific/supported-software/g/GARLI.md index 5e2a96344..fb8baa906 100644 --- a/docs/version-specific/supported-software/g/GARLI.md +++ b/docs/version-specific/supported-software/g/GARLI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GARLI GARLI, Genetic Algorithm for Rapid Likelihood Inference is a program for inferring phylogenetic trees. Using an approach similar to a classical genetic algorithm, it rapidly searches the space of evolutionary trees and model parameters to find the solution maximizing the likelihood score. It implements nucleotide, amino acid and codon-based models of sequence evolution, and runs on all platforms. @@ -7,3 +11,6 @@ GARLI, Genetic Algorithm for Rapid Likelihood Inference is a program for infer version | toolchain --------|---------- ``2.01`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GAT.md b/docs/version-specific/supported-software/g/GAT.md index 610f2d820..af8110be5 100644 --- a/docs/version-specific/supported-software/g/GAT.md +++ b/docs/version-specific/supported-software/g/GAT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GAT The Genomic Association Tester (GAT) is a tool for computing the significance of overlap between multiple sets of genomic intervals. GAT estimates significance based on simulation. @@ -7,3 +11,6 @@ The Genomic Association Tester (GAT) is a tool for computing the significance of version | versionsuffix | toolchain --------|---------------|---------- ``1.2.2`` | ``-Python-2.7.11`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GATB-Core.md b/docs/version-specific/supported-software/g/GATB-Core.md index 0494dd900..ea4df1b72 100644 --- a/docs/version-specific/supported-software/g/GATB-Core.md +++ b/docs/version-specific/supported-software/g/GATB-Core.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GATB-Core GATB-Core is a high-performance and low memory footprint C++ library that provides a set of highly efficient algorithms to analyse NGS data sets @@ -7,3 +11,6 @@ GATB-Core is a high-performance and low memory footprint C++ library that provid version | toolchain --------|---------- ``1.4.2`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GATE.md b/docs/version-specific/supported-software/g/GATE.md index 05a18b883..9d80d1cc1 100644 --- a/docs/version-specific/supported-software/g/GATE.md +++ b/docs/version-specific/supported-software/g/GATE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GATE GATE is an advanced opensource software developed by the international OpenGATE collaboration and dedicated to the numerical simulations in medical imaging. It currently supports simulations of Emission Tomography (Positron Emission Tomography - PET and Single Photon Emission Computed Tomography - SPECT), and Computed Tomography @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``9.1`` | | ``foss/2021b`` ``9.2`` | | ``foss/2021b`` ``9.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GATK.md b/docs/version-specific/supported-software/g/GATK.md index 649a800c9..c1e07a329 100644 --- a/docs/version-specific/supported-software/g/GATK.md +++ b/docs/version-specific/supported-software/g/GATK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GATK The GATK is a structured software library that makes writing efficient analysis tools using next-generation sequencing data very easy, and second it's a suite of tools for working with human medical resequencing projects such as 1000 Genomes and The Cancer Genome Atlas. These tools include things like a depth of coverage analyzers, a quality score recalibrator, a SNP/indel caller and a local realigner. @@ -49,3 +53,6 @@ version | versionsuffix | toolchain ``4.4.0.0`` | ``-Java-17`` | ``GCCcore/12.2.0`` ``4.4.0.0`` | ``-Java-17`` | ``GCCcore/12.3.0`` ``4.5.0.0`` | ``-Java-17`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GBprocesS.md b/docs/version-specific/supported-software/g/GBprocesS.md index c5fcb8f33..532e18633 100644 --- a/docs/version-specific/supported-software/g/GBprocesS.md +++ b/docs/version-specific/supported-software/g/GBprocesS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GBprocesS GBprocesS allows for the extraction of genomic inserts from NGS data for GBS experiments. Preprocessing is performed in different stages that are part of a linear pipeline where the steps are performed in order. GBprocesS provides a flexible way to adjust the functionality to your needs, as the operations required and the execution order vary depending on the GBS protocol used. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.3`` | ``-Python-3.8.2`` | ``intel/2020a`` ``4.0.0.post1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GC3Pie.md b/docs/version-specific/supported-software/g/GC3Pie.md index 8016cc505..5db93510a 100644 --- a/docs/version-specific/supported-software/g/GC3Pie.md +++ b/docs/version-specific/supported-software/g/GC3Pie.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GC3Pie GC3Pie is a Python package for running large job campaigns on diverse batch-oriented execution environments. @@ -9,3 +13,6 @@ version | toolchain ``2.4.2`` | ``system`` ``2.5.0`` | ``system`` ``2.5.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GCC.md b/docs/version-specific/supported-software/g/GCC.md index 252750eb3..150a1bea8 100644 --- a/docs/version-specific/supported-software/g/GCC.md +++ b/docs/version-specific/supported-software/g/GCC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GCC The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, as well as libraries for these languages (libstdc++, libgcj,...). @@ -75,3 +79,6 @@ version | versionsuffix | toolchain ``9.5.0`` | | ``system`` ``system`` | ``-2.29`` | ``system`` ``system`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GCCcore.md b/docs/version-specific/supported-software/g/GCCcore.md index 49b216300..fe0e664e3 100644 --- a/docs/version-specific/supported-software/g/GCCcore.md +++ b/docs/version-specific/supported-software/g/GCCcore.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GCCcore The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, as well as libraries for these languages (libstdc++, libgcj,...). @@ -45,3 +49,6 @@ version | toolchain ``9.4.0`` | ``system`` ``9.5.0`` | ``system`` ``system`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GCTA.md b/docs/version-specific/supported-software/g/GCTA.md index 59dfe2fc7..814063f5e 100644 --- a/docs/version-specific/supported-software/g/GCTA.md +++ b/docs/version-specific/supported-software/g/GCTA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GCTA GCTA (Genome-wide Complex Trait Analysis) is a software package, which was initially developed to estimate the proportion of phenotypic variance explained by all genome-wide SNPs for a complex trait but has been extensively extended for many other analyses of data from genome-wide association studies (GWASs). @@ -10,3 +14,6 @@ version | toolchain ``1.94.0beta`` | ``gfbf/2022a`` ``1.94.1`` | ``gfbf/2022a`` ``1.94.1`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GConf.md b/docs/version-specific/supported-software/g/GConf.md index 068c222b2..0887c560f 100644 --- a/docs/version-specific/supported-software/g/GConf.md +++ b/docs/version-specific/supported-software/g/GConf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GConf GConf is a system for storing application preferences. It is intended for user preferences; not configuration of something like Apache, or arbitrary data storage. @@ -17,3 +21,6 @@ version | toolchain ``3.2.6`` | ``intel/2016b`` ``3.2.6`` | ``intel/2017a`` ``3.2.6`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GD.md b/docs/version-specific/supported-software/g/GD.md index b4073e0b0..00d6cd169 100644 --- a/docs/version-specific/supported-software/g/GD.md +++ b/docs/version-specific/supported-software/g/GD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GD GD.pm - Interface to Gd Graphics Library @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``2.71`` | | ``GCCcore/9.3.0`` ``2.73`` | | ``GCCcore/10.3.0`` ``2.75`` | | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GDAL.md b/docs/version-specific/supported-software/g/GDAL.md index 04b3d6e76..54d554ac7 100644 --- a/docs/version-specific/supported-software/g/GDAL.md +++ b/docs/version-specific/supported-software/g/GDAL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GDAL GDAL is a translator library for raster geospatial data formats that is released under an X/MIT style Open Source license by the Open Source Geospatial Foundation. As a library, it presents a single abstract data model to the calling application for all supported formats. It also comes with a variety of useful commandline utilities for data translation and processing. @@ -53,3 +57,6 @@ version | versionsuffix | toolchain ``3.5.0`` | | ``foss/2022a`` ``3.6.2`` | | ``foss/2022b`` ``3.7.1`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GDB.md b/docs/version-specific/supported-software/g/GDB.md index 19fc2a578..81cec6429 100644 --- a/docs/version-specific/supported-software/g/GDB.md +++ b/docs/version-specific/supported-software/g/GDB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GDB The GNU Project Debugger @@ -29,3 +33,6 @@ version | versionsuffix | toolchain ``8.1.1`` | ``-Python-2.7.14`` | ``intel/2018a`` ``8.3`` | ``-Python-3.7.2`` | ``GCCcore/8.2.0`` ``9.1`` | ``-Python-3.7.4`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GDCHART.md b/docs/version-specific/supported-software/g/GDCHART.md index 1f47495a4..658faa9cf 100644 --- a/docs/version-specific/supported-software/g/GDCHART.md +++ b/docs/version-specific/supported-software/g/GDCHART.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GDCHART Easy to use C API, high performance library to create charts and graphs in PNG, GIF and WBMP format. @@ -7,3 +11,6 @@ Easy to use C API, high performance library to create charts and graphs in PNG, version | toolchain --------|---------- ``0.11.5dev`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GDCM.md b/docs/version-specific/supported-software/g/GDCM.md index 4ac2cd11a..553d97208 100644 --- a/docs/version-specific/supported-software/g/GDCM.md +++ b/docs/version-specific/supported-software/g/GDCM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GDCM Grassroots DICOM: Cross-platform DICOM implementation @@ -14,3 +18,6 @@ version | toolchain ``3.0.5`` | ``GCCcore/8.3.0`` ``3.0.8`` | ``GCCcore/10.2.0`` ``3.0.8`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GDGraph.md b/docs/version-specific/supported-software/g/GDGraph.md index eee1e4a8b..8fab6ccba 100644 --- a/docs/version-specific/supported-software/g/GDGraph.md +++ b/docs/version-specific/supported-software/g/GDGraph.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GDGraph GDGraph is a Perl package to generate charts @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.54`` | ``-Perl-5.28.0`` | ``foss/2018b`` ``1.54`` | ``-Perl-5.26.1`` | ``intel/2018a`` ``1.56`` | | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GDRCopy.md b/docs/version-specific/supported-software/g/GDRCopy.md index 0fe2a3ea9..ad5f65298 100644 --- a/docs/version-specific/supported-software/g/GDRCopy.md +++ b/docs/version-specific/supported-software/g/GDRCopy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GDRCopy A low-latency GPU memory copy library based on NVIDIA GPUDirect RDMA technology. @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``2.3.1`` | | ``GCCcore/12.3.0`` ``2.4`` | | ``GCCcore/13.2.0`` ``2.4.1`` | | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GEGL.md b/docs/version-specific/supported-software/g/GEGL.md index 37d80fbcd..0e032ee75 100644 --- a/docs/version-specific/supported-software/g/GEGL.md +++ b/docs/version-specific/supported-software/g/GEGL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GEGL GEGL (Generic Graphics Library) is a data flow based image processing framework, providing floating point processing and non-destructive image processing capabilities to GNU Image Manipulation Program (GIMP) and other projects. @@ -7,3 +11,6 @@ GEGL (Generic Graphics Library) is a data flow based image processing framework, version | toolchain --------|---------- ``0.4.30`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GEM-library.md b/docs/version-specific/supported-software/g/GEM-library.md index c04a6bc09..cf51d92ca 100644 --- a/docs/version-specific/supported-software/g/GEM-library.md +++ b/docs/version-specific/supported-software/g/GEM-library.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GEM-library Next-generation sequencing platforms (Illumina/Solexa, ABI/SOLiD, etc.) call for powerful and very optimized tools to index/analyze huge genomes. The GEM library strives to be a true "next-generation" tool for handling any kind of sequence data, offering state-of-the-art algorithms and data structures specifically tailored to this demanding task. At the moment, efficient indexing and searching algorithms based on the Burrows-Wheeler transform (BWT) have been implemented. The library core is written in C for maximum speed, with concise interfaces to higher-level programming languages like OCaml and Python. Many high-performance standalone programs (mapper, splice mapper, etc.) are provided along with the library; in general, new algorithms and tools can be easily implemented on the top of it. @@ -7,3 +11,6 @@ Next-generation sequencing platforms (Illumina/Solexa, ABI/SOLiD, etc.) call f version | versionsuffix | toolchain --------|---------------|---------- ``20130406-045632`` | ``_pre-release-3_Linux-x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GEM.md b/docs/version-specific/supported-software/g/GEM.md index 0a2c0f94e..e6790e060 100644 --- a/docs/version-specific/supported-software/g/GEM.md +++ b/docs/version-specific/supported-software/g/GEM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GEM GEM (Gene-Environment interaction analysis for Millions of samples) is a software program for large-scale gene-environment interaction testing in samples from unrelated individuals. It enables genome-wide association studies in up to millions of samples while allowing for multiple exposures, control for genotype-covariate interactions, and robust inference. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.5.1`` | ``foss/2022a`` ``1.5.1`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GEMMA.md b/docs/version-specific/supported-software/g/GEMMA.md index c3530753d..405fc2303 100644 --- a/docs/version-specific/supported-software/g/GEMMA.md +++ b/docs/version-specific/supported-software/g/GEMMA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GEMMA Genome-wide Efficient Mixed Model Association @@ -12,3 +16,6 @@ version | toolchain ``0.98.5`` | ``foss/2020a`` ``0.98.5`` | ``foss/2021b`` ``0.98.5`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GEOS.md b/docs/version-specific/supported-software/g/GEOS.md index fa2059b28..c5df6e7f0 100644 --- a/docs/version-specific/supported-software/g/GEOS.md +++ b/docs/version-specific/supported-software/g/GEOS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GEOS GEOS (Geometry Engine - Open Source) is a C++ port of the Java Topology Suite (JTS) @@ -43,3 +47,6 @@ version | versionsuffix | toolchain ``3.9.1`` | | ``GCC/11.2.0`` ``3.9.1`` | | ``iccifort/2020.4.304`` ``3.9.1`` | | ``intel-compilers/2021.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GETORB.md b/docs/version-specific/supported-software/g/GETORB.md index cf2aff41c..aa304f4ab 100644 --- a/docs/version-specific/supported-software/g/GETORB.md +++ b/docs/version-specific/supported-software/g/GETORB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GETORB GETORB software package contains programs to handle the orbital data records (ODRs) @@ -7,3 +11,6 @@ GETORB software package contains programs to handle the orbital data records (OD version | toolchain --------|---------- ``2.3.2`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GFF3-toolkit.md b/docs/version-specific/supported-software/g/GFF3-toolkit.md index 71dcf5f68..8bffe73f0 100644 --- a/docs/version-specific/supported-software/g/GFF3-toolkit.md +++ b/docs/version-specific/supported-software/g/GFF3-toolkit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GFF3-toolkit Python programs for processing GFF3 files @@ -7,3 +11,6 @@ Python programs for processing GFF3 files version | toolchain --------|---------- ``2.1.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GFOLD.md b/docs/version-specific/supported-software/g/GFOLD.md index 39a4210f5..6ef5609bc 100644 --- a/docs/version-specific/supported-software/g/GFOLD.md +++ b/docs/version-specific/supported-software/g/GFOLD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GFOLD Generalized fold change for ranking differentially expressed genes from RNA-seq data @@ -7,3 +11,6 @@ Generalized fold change for ranking differentially expressed genes from RNA-seq version | toolchain --------|---------- ``1.1.4`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GHC.md b/docs/version-specific/supported-software/g/GHC.md index 728a5278f..c8b69d4dc 100644 --- a/docs/version-specific/supported-software/g/GHC.md +++ b/docs/version-specific/supported-software/g/GHC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GHC The Glorious/Glasgow Haskell Compiler @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``8.6.5`` | ``-x86_64`` | ``system`` ``9.2.2`` | ``-x86_64`` | ``system`` ``9.4.6`` | ``-x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GI-DocGen.md b/docs/version-specific/supported-software/g/GI-DocGen.md index 4b943986e..67f3e2f0f 100644 --- a/docs/version-specific/supported-software/g/GI-DocGen.md +++ b/docs/version-specific/supported-software/g/GI-DocGen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GI-DocGen GI-DocGen is a document generator for GObject-based libraries. GObject is the base type system of the GNOME project. GI-Docgen reuses the introspection data generated by GObject-based libraries to generate the API reference of these libraries, as well as other ancillary documentation. @@ -7,3 +11,6 @@ GI-DocGen is a document generator for GObject-based libraries. GObject is the ba version | toolchain --------|---------- ``2023.3`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GIMIC.md b/docs/version-specific/supported-software/g/GIMIC.md index 853aa960f..98b303f29 100644 --- a/docs/version-specific/supported-software/g/GIMIC.md +++ b/docs/version-specific/supported-software/g/GIMIC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GIMIC The GIMIC program calculates magnetically induced currents in molecules. You need to provide this program with a density matrix in atomic-orbital (AO) basis and three (effective) magnetically perturbed AO density matrices in the proper format. Currently ACES2, Turbomole, G09, QChem, FERMION++, and LSDalton can produce these matrices. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.2.1`` | | ``foss/2022a`` ``2018.04.20`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GIMP.md b/docs/version-specific/supported-software/g/GIMP.md index 07c7f833c..53c08799e 100644 --- a/docs/version-specific/supported-software/g/GIMP.md +++ b/docs/version-specific/supported-software/g/GIMP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GIMP GIMP is a cross-platform image editor available for GNU/Linux, OS X, Windows and more operating systems. @@ -7,3 +11,6 @@ GIMP is a cross-platform image editor available for GNU/Linux, OS X, Windows and version | toolchain --------|---------- ``2.10.24`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GIMPS.md b/docs/version-specific/supported-software/g/GIMPS.md index fc0a6efad..430218a19 100644 --- a/docs/version-specific/supported-software/g/GIMPS.md +++ b/docs/version-specific/supported-software/g/GIMPS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GIMPS GIMPS: Great Internet Mersenne Prime Search; it can be useful for limited stress testing of nodes, in user space @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``p95v279`` | ``GCC/4.8.2`` ``p95v279.linux64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GKeyll.md b/docs/version-specific/supported-software/g/GKeyll.md index e2a08f436..470ff179a 100644 --- a/docs/version-specific/supported-software/g/GKeyll.md +++ b/docs/version-specific/supported-software/g/GKeyll.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GKeyll Gkeyll v2.0 (pronounced as in the book “The Strange Case of Dr. Jekyll and Mr. Hyde”) is a computational plasma physics code mostly written in C/C++ and LuaJIT. Gkeyll contains solvers for gyrokinetic equations, Vlasov-Maxwell equations, and multi-fluid equations. Gkeyll contains ab-initio and novel implementations of a number of algorithms, and perhaps is unique in using a JIT compiled typeless dynamic language for as its main implementation language. @@ -7,3 +11,6 @@ Gkeyll v2.0 (pronounced as in the book “The Strange Case of Dr. Jekyll and Mr version | versionsuffix | toolchain --------|---------------|---------- ``20220803`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GKlib-METIS.md b/docs/version-specific/supported-software/g/GKlib-METIS.md index fcd3d72d7..76b581780 100644 --- a/docs/version-specific/supported-software/g/GKlib-METIS.md +++ b/docs/version-specific/supported-software/g/GKlib-METIS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GKlib-METIS A library of various helper routines and frameworks used by many of the lab's software @@ -7,3 +11,6 @@ A library of various helper routines and frameworks used by many of the lab's s version | toolchain --------|---------- ``5.1.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GL2PS.md b/docs/version-specific/supported-software/g/GL2PS.md index 3176f5c9a..286fd26ba 100644 --- a/docs/version-specific/supported-software/g/GL2PS.md +++ b/docs/version-specific/supported-software/g/GL2PS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GL2PS GL2PS: an OpenGL to PostScript printing library @@ -27,3 +31,6 @@ version | versionsuffix | toolchain ``1.4.2`` | | ``GCCcore/12.2.0`` ``1.4.2`` | | ``GCCcore/12.3.0`` ``1.4.2`` | | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GLFW.md b/docs/version-specific/supported-software/g/GLFW.md index ae4c7abbe..9c6d8c6f8 100644 --- a/docs/version-specific/supported-software/g/GLFW.md +++ b/docs/version-specific/supported-software/g/GLFW.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GLFW GLFW is an Open Source, multi-platform library for OpenGL, OpenGL ES and Vulkan development on the desktop @@ -14,3 +18,6 @@ version | toolchain ``3.3.8`` | ``GCCcore/11.3.0`` ``3.4`` | ``GCCcore/12.2.0`` ``3.4`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GLI.md b/docs/version-specific/supported-software/g/GLI.md index 9ab5d360f..925abc3a2 100644 --- a/docs/version-specific/supported-software/g/GLI.md +++ b/docs/version-specific/supported-software/g/GLI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GLI Graphics Language Interpreter @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``4.5.31`` | ``GCCcore/10.2.0`` ``4.5.31`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GLIMMER.md b/docs/version-specific/supported-software/g/GLIMMER.md index 80bd9189e..0914d6000 100644 --- a/docs/version-specific/supported-software/g/GLIMMER.md +++ b/docs/version-specific/supported-software/g/GLIMMER.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GLIMMER Glimmer is a system for finding genes in microbial DNA, especially the genomes of bacteria, archaea, and viruses. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.02b`` | ``foss/2016b`` ``3.02b`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GLIMPSE.md b/docs/version-specific/supported-software/g/GLIMPSE.md index d297c53a2..c6ae113ed 100644 --- a/docs/version-specific/supported-software/g/GLIMPSE.md +++ b/docs/version-specific/supported-software/g/GLIMPSE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GLIMPSE GLIMPSE2 is a set of tools for phasing and imputation for low-coverage sequencing datasets @@ -9,3 +13,6 @@ version | toolchain ``2.0.0`` | ``GCC/10.3.0`` ``2.0.0`` | ``GCC/11.3.0`` ``2.0.0`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GLM-AED.md b/docs/version-specific/supported-software/g/GLM-AED.md index 4a6e8bfe1..ef8eb7788 100644 --- a/docs/version-specific/supported-software/g/GLM-AED.md +++ b/docs/version-specific/supported-software/g/GLM-AED.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GLM-AED The General Lake Model (GLM) is a water balance and one-dimensional vertical stratification hydrodynamic model, which is dynamically coupled with the AED water quality modelling library. GLM-AED is suitable for simulating conditions in a wide range of natural and engineered lakes, including shallow (well-mixed) and deep (stratified) systems. The model has been successfully applied to systems from the scale of individual ponds and wetlands, to actively operated reservoirs, upto the scale of the Great Lakes. @@ -7,3 +11,6 @@ The General Lake Model (GLM) is a water balance and one-dimensional vertical str version | toolchain --------|---------- ``3.3.0a5`` | ``gompi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GLM.md b/docs/version-specific/supported-software/g/GLM.md index 000b82f2f..e2744c6e6 100644 --- a/docs/version-specific/supported-software/g/GLM.md +++ b/docs/version-specific/supported-software/g/GLM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GLM OpenGL Mathematics (GLM) is a header only C++ mathematics library for graphics software based on the OpenGL Shading Language (GLSL) specifications. @@ -17,3 +21,6 @@ version | toolchain ``0.9.9.8`` | ``GCCcore/12.2.0`` ``0.9.9.8`` | ``GCCcore/12.3.0`` ``0.9.9.8`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GLPK.md b/docs/version-specific/supported-software/g/GLPK.md index 866ef1d39..3a572b7e3 100644 --- a/docs/version-specific/supported-software/g/GLPK.md +++ b/docs/version-specific/supported-software/g/GLPK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GLPK The GLPK (GNU Linear Programming Kit) package is intended for solving large-scale linear programming (LP), mixed integer programming (MIP), and other related problems. It is a set of routines written in ANSI C and organized in the form of a callable library. @@ -23,3 +27,6 @@ version | toolchain ``5.0`` | ``GCCcore/12.2.0`` ``5.0`` | ``GCCcore/12.3.0`` ``5.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GLib.md b/docs/version-specific/supported-software/g/GLib.md index dc0699fce..c91e0c9c9 100644 --- a/docs/version-specific/supported-software/g/GLib.md +++ b/docs/version-specific/supported-software/g/GLib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GLib GLib is one of the base libraries of the GTK+ project @@ -32,3 +36,6 @@ version | toolchain ``2.75.0`` | ``GCCcore/12.2.0`` ``2.77.1`` | ``GCCcore/12.3.0`` ``2.78.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GLibmm.md b/docs/version-specific/supported-software/g/GLibmm.md index 6d7327629..bb453c679 100644 --- a/docs/version-specific/supported-software/g/GLibmm.md +++ b/docs/version-specific/supported-software/g/GLibmm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GLibmm C++ bindings for Glib @@ -10,3 +14,6 @@ version | toolchain ``2.49.7`` | ``GCCcore/8.2.0`` ``2.49.7`` | ``GCCcore/8.3.0`` ``2.66.4`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GMAP-GSNAP.md b/docs/version-specific/supported-software/g/GMAP-GSNAP.md index f4a7287cd..840e3f7ef 100644 --- a/docs/version-specific/supported-software/g/GMAP-GSNAP.md +++ b/docs/version-specific/supported-software/g/GMAP-GSNAP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GMAP-GSNAP GMAP: A Genomic Mapping and Alignment Program for mRNA and EST Sequences GSNAP: Genomic Short-read Nucleotide Alignment Program @@ -17,3 +21,6 @@ version | toolchain ``2023-02-17`` | ``GCC/11.3.0`` ``2023-04-20`` | ``GCC/10.3.0`` ``2023-04-20`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GMP-ECM.md b/docs/version-specific/supported-software/g/GMP-ECM.md index 197cce569..cba080146 100644 --- a/docs/version-specific/supported-software/g/GMP-ECM.md +++ b/docs/version-specific/supported-software/g/GMP-ECM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GMP-ECM Yet another implementation of the Elliptic Curve Method. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``7.0.5`` | ``GCCcore/11.3.0`` ``7.0.5`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GMP.md b/docs/version-specific/supported-software/g/GMP.md index 5110d4b76..7b31a4a0d 100644 --- a/docs/version-specific/supported-software/g/GMP.md +++ b/docs/version-specific/supported-software/g/GMP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GMP GMP is a free library for arbitrary precision arithmetic, operating on signed integers, rational numbers, and floating point numbers. @@ -41,3 +45,6 @@ version | toolchain ``6.2.1`` | ``GCCcore/12.3.0`` ``6.3.0`` | ``GCCcore/13.2.0`` ``6.3.0`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GMT.md b/docs/version-specific/supported-software/g/GMT.md index 1257f3749..2ce7a9be8 100644 --- a/docs/version-specific/supported-software/g/GMT.md +++ b/docs/version-specific/supported-software/g/GMT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GMT GMT is an open source collection of about 80 command-line tools for manipulating geographic and Cartesian data sets (including filtering, trend fitting, gridding, projecting, etc.) and producing PostScript illustrations ranging from simple x-y plots via contour maps to artificially illuminated surfaces and 3D perspective views; the GMT supplements add another 40 more specialized and discipline-specific tools. @@ -13,3 +17,6 @@ version | toolchain ``5.4.5`` | ``foss/2019a`` ``6.2.0`` | ``foss/2019b`` ``6.2.0`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GNU.md b/docs/version-specific/supported-software/g/GNU.md index ec3bdc544..7bdd9ac68 100644 --- a/docs/version-specific/supported-software/g/GNU.md +++ b/docs/version-specific/supported-software/g/GNU.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GNU Compiler-only toolchain with GCC and binutils. @@ -9,3 +13,6 @@ version | toolchain ``4.9.2-2.25`` | ``system`` ``4.9.3-2.25`` | ``system`` ``5.1.0-2.25`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GOATOOLS.md b/docs/version-specific/supported-software/g/GOATOOLS.md index d47842618..743faf8bd 100644 --- a/docs/version-specific/supported-software/g/GOATOOLS.md +++ b/docs/version-specific/supported-software/g/GOATOOLS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GOATOOLS A Python library for Gene Ontology analyses @@ -10,3 +14,6 @@ version | toolchain ``1.3.1`` | ``foss/2021b`` ``1.3.1`` | ``foss/2022a`` ``1.4.5`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GOBNILP.md b/docs/version-specific/supported-software/g/GOBNILP.md index 690e11c5f..90f6a9034 100644 --- a/docs/version-specific/supported-software/g/GOBNILP.md +++ b/docs/version-specific/supported-software/g/GOBNILP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GOBNILP GOBNILP (Globally Optimal Bayesian Network learning using Integer Linear Programming) is a C program which learns Bayesian networks from complete discrete data or from local scores. @@ -7,3 +11,6 @@ GOBNILP (Globally Optimal Bayesian Network learning using Integer Linear Program version | toolchain --------|---------- ``1.6.3`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GObject-Introspection.md b/docs/version-specific/supported-software/g/GObject-Introspection.md index 66a7d539b..089587ef2 100644 --- a/docs/version-specific/supported-software/g/GObject-Introspection.md +++ b/docs/version-specific/supported-software/g/GObject-Introspection.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GObject-Introspection GObject introspection is a middleware layer between C libraries (using GObject) and language bindings. The C library can be scanned at compile time and generate a metadata file, in addition to the actual native C library. Then at runtime, language bindings can read this metadata and automatically provide bindings to call into the C library. @@ -33,3 +37,6 @@ version | versionsuffix | toolchain ``1.74.0`` | | ``GCCcore/12.2.0`` ``1.76.1`` | | ``GCCcore/12.3.0`` ``1.78.1`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GP2C.md b/docs/version-specific/supported-software/g/GP2C.md index c39206d4b..1f6ccf6de 100644 --- a/docs/version-specific/supported-software/g/GP2C.md +++ b/docs/version-specific/supported-software/g/GP2C.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GP2C The gp2c compiler is a package for translating GP routines into the C programming language, so that they can be compiled and used with the PARI system or the GP calculator. @@ -7,3 +11,6 @@ The gp2c compiler is a package for translating GP routines into the C programmin version | toolchain --------|---------- ``0.0.9pl5`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GPAW-setups.md b/docs/version-specific/supported-software/g/GPAW-setups.md index d0bfe9301..8bad4c161 100644 --- a/docs/version-specific/supported-software/g/GPAW-setups.md +++ b/docs/version-specific/supported-software/g/GPAW-setups.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GPAW-setups PAW setup for the GPAW Density Functional Theory package. Users can install setups manually using 'gpaw install-data' or use setups from this package. The versions of GPAW and GPAW-setups can be intermixed. @@ -11,3 +15,6 @@ version | toolchain ``0.9.20000`` | ``system`` ``0.9.9672`` | ``system`` ``24.1.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GPAW.md b/docs/version-specific/supported-software/g/GPAW.md index fce061ec0..ca0faf292 100644 --- a/docs/version-specific/supported-software/g/GPAW.md +++ b/docs/version-specific/supported-software/g/GPAW.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GPAW GPAW is a density-functional theory (DFT) Python code based on the projector-augmented wave (PAW) method and the atomic simulation environment (ASE). It uses real-space uniform grids and multigrid methods or atom-centered basis-functions. @@ -34,3 +38,6 @@ version | versionsuffix | toolchain ``24.1.0`` | | ``foss/2023a`` ``24.1.0`` | | ``intel/2022a`` ``24.1.0`` | | ``intel/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GPy.md b/docs/version-specific/supported-software/g/GPy.md index 415810a8a..f05447db2 100644 --- a/docs/version-specific/supported-software/g/GPy.md +++ b/docs/version-specific/supported-software/g/GPy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GPy GPy is a Gaussian Process (GP) framework written in Python @@ -7,3 +11,6 @@ GPy is a Gaussian Process (GP) framework written in Python version | toolchain --------|---------- ``1.10.0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GPyOpt.md b/docs/version-specific/supported-software/g/GPyOpt.md index f6bac0271..1b3dd1faf 100644 --- a/docs/version-specific/supported-software/g/GPyOpt.md +++ b/docs/version-specific/supported-software/g/GPyOpt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GPyOpt GPyOpt is a Python open-source library for Bayesian Optimization @@ -7,3 +11,6 @@ GPyOpt is a Python open-source library for Bayesian Optimization version | toolchain --------|---------- ``1.2.6`` | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GPyTorch.md b/docs/version-specific/supported-software/g/GPyTorch.md index a17572fde..9e1ae0cc4 100644 --- a/docs/version-specific/supported-software/g/GPyTorch.md +++ b/docs/version-specific/supported-software/g/GPyTorch.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GPyTorch GPyTorch is a Gaussian process library implemented using PyTorch. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.10`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``1.3.0`` | | ``foss/2020b`` ``1.9.1`` | ``-CUDA-11.3.1`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GRASP-suite.md b/docs/version-specific/supported-software/g/GRASP-suite.md index 397b86615..0fec62cfe 100644 --- a/docs/version-specific/supported-software/g/GRASP-suite.md +++ b/docs/version-specific/supported-software/g/GRASP-suite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GRASP-suite GRASP-suite is a collection of tools and tutorials to perform and analyse ancestral sequence reconstruction. @@ -7,3 +11,6 @@ GRASP-suite is a collection of tools and tutorials to perform and analyse ances version | versionsuffix | toolchain --------|---------------|---------- ``2023-05-09`` | ``-Java-17`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GRASP.md b/docs/version-specific/supported-software/g/GRASP.md index d858de2ce..30ad23a76 100644 --- a/docs/version-specific/supported-software/g/GRASP.md +++ b/docs/version-specific/supported-software/g/GRASP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GRASP The General Relativistic Atomic Structure Package (GRASP) is a set of Fortran 90 programs for performing fully-relativistic electron structure calculations of atoms. @@ -7,3 +11,6 @@ The General Relativistic Atomic Structure Package (GRASP) is a set of Fortran 9 version | toolchain --------|---------- ``2018`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GRASS.md b/docs/version-specific/supported-software/g/GRASS.md index 36673cacc..9f1f886fe 100644 --- a/docs/version-specific/supported-software/g/GRASS.md +++ b/docs/version-specific/supported-software/g/GRASS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GRASS The Geographic Resources Analysis Support System - used for geospatial data management and analysis, image processing, graphics and maps production, spatial modeling, and visualization @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``7.6.0`` | ``-Python-2.7.15`` | ``foss/2018b`` ``7.8.3`` | ``-Python-3.7.4`` | ``fosscuda/2019b`` ``8.2.0`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GRIDSS.md b/docs/version-specific/supported-software/g/GRIDSS.md index ed0929008..623fd7acc 100644 --- a/docs/version-specific/supported-software/g/GRIDSS.md +++ b/docs/version-specific/supported-software/g/GRIDSS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GRIDSS GRIDSS is a module software suite containing tools useful for the detection of genomic rearrangements. GRIDSS includes a genome-wide break-end assembler, as well as a structural variation caller for Illumina sequencing data. GRIDSS calls variants based on alignment-guided positional de Bruijn graph genome-wide break-end assembly, split read, and read pair evidence. @@ -7,3 +11,6 @@ GRIDSS is a module software suite containing tools useful for the detection of g version | versionsuffix | toolchain --------|---------------|---------- ``2.13.2`` | ``-Java-11`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GRIT.md b/docs/version-specific/supported-software/g/GRIT.md index 98f55c049..ad9bc5dc2 100644 --- a/docs/version-specific/supported-software/g/GRIT.md +++ b/docs/version-specific/supported-software/g/GRIT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GRIT GRIT - A tool for the integrative analysis of RNA-seq type assays @@ -7,3 +11,6 @@ GRIT - A tool for the integrative analysis of RNA-seq type assays version | versionsuffix | toolchain --------|---------------|---------- ``2.0.5`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GRNBoost.md b/docs/version-specific/supported-software/g/GRNBoost.md index 42783e599..be484addf 100644 --- a/docs/version-specific/supported-software/g/GRNBoost.md +++ b/docs/version-specific/supported-software/g/GRNBoost.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GRNBoost XGBoost is an optimized distributed gradient boosting library designed to be highly efficient, flexible and portable. @@ -7,3 +11,6 @@ XGBoost is an optimized distributed gradient boosting library designed to be hig version | versionsuffix | toolchain --------|---------------|---------- ``20171009`` | ``-Java-1.8.0_152`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GROMACS.md b/docs/version-specific/supported-software/g/GROMACS.md index 8c2641f2a..af7873731 100644 --- a/docs/version-specific/supported-software/g/GROMACS.md +++ b/docs/version-specific/supported-software/g/GROMACS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GROMACS GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles. @@ -74,3 +78,6 @@ version | versionsuffix | toolchain ``5.1.2`` | ``-hybrid`` | ``intel/2016a`` ``5.1.4`` | ``-hybrid`` | ``foss/2016b`` ``5.1.4`` | ``-mt`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GSD.md b/docs/version-specific/supported-software/g/GSD.md index 4f0925dab..5aefed391 100644 --- a/docs/version-specific/supported-software/g/GSD.md +++ b/docs/version-specific/supported-software/g/GSD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GSD The GSD file format is the native file format for HOOMD-blue. GSD files store trajectories of the HOOMD-blue system state in a binary file with efficient random access to frames. GSD allows all particle and topology properties to vary from one frame to the next. Use the GSD Python API to specify the initial condition for a HOOMD-blue simulation or analyze trajectory output with a script. Read a GSD trajectory with a visualization tool to explore the behavior of the simulation. @@ -7,3 +11,6 @@ The GSD file format is the native file format for HOOMD-blue. GSD files store tr version | toolchain --------|---------- ``3.2.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GSEA.md b/docs/version-specific/supported-software/g/GSEA.md index 15c0dde8d..732848448 100644 --- a/docs/version-specific/supported-software/g/GSEA.md +++ b/docs/version-specific/supported-software/g/GSEA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GSEA Gene Set Enrichment Analysis (GSEA) is a computational method that determines whether an a priori defined set of genes shows statistically significant, concordant differences between two biological states (e.g. phenotypes). @@ -7,3 +11,6 @@ Gene Set Enrichment Analysis (GSEA) is a computational method that determines w version | toolchain --------|---------- ``4.0.3`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GSL.md b/docs/version-specific/supported-software/g/GSL.md index 80f561234..00aa24c1b 100644 --- a/docs/version-specific/supported-software/g/GSL.md +++ b/docs/version-specific/supported-software/g/GSL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GSL The GNU Scientific Library (GSL) is a numerical library for C and C++ programmers. The library provides a wide range of mathematical routines such as random number generators, special functions and least-squares fitting. @@ -40,3 +44,6 @@ version | toolchain ``2.7`` | ``intel-compilers/2021.2.0`` ``2.7`` | ``intel-compilers/2021.4.0`` ``2.7`` | ``intel-compilers/2022.1.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GST-plugins-bad.md b/docs/version-specific/supported-software/g/GST-plugins-bad.md index b828c2807..57d2be767 100644 --- a/docs/version-specific/supported-software/g/GST-plugins-bad.md +++ b/docs/version-specific/supported-software/g/GST-plugins-bad.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GST-plugins-bad GStreamer is a library for constructing graphs of media-handling components. The applications it supports range from simple Ogg/Vorbis playback, audio/video streaming to complex audio (mixing) and video (non-linear editing) processing. @@ -9,3 +13,6 @@ version | toolchain ``1.20.2`` | ``GCC/11.3.0`` ``1.22.5`` | ``GCC/12.2.0`` ``1.22.5`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GST-plugins-base.md b/docs/version-specific/supported-software/g/GST-plugins-base.md index 03ca23886..a85cea6cc 100644 --- a/docs/version-specific/supported-software/g/GST-plugins-base.md +++ b/docs/version-specific/supported-software/g/GST-plugins-base.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GST-plugins-base GStreamer is a library for constructing graphs of media-handling components. The applications it supports range from simple Ogg/Vorbis playback, audio/video streaming to complex audio (mixing) and video (non-linear editing) processing. @@ -23,3 +27,6 @@ version | toolchain ``1.22.5`` | ``GCC/12.3.0`` ``1.6.4`` | ``foss/2016a`` ``1.8.3`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GStreamer.md b/docs/version-specific/supported-software/g/GStreamer.md index 8f000f3ed..0c7cb2710 100644 --- a/docs/version-specific/supported-software/g/GStreamer.md +++ b/docs/version-specific/supported-software/g/GStreamer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GStreamer GStreamer is a library for constructing graphs of media-handling components. The applications it supports range from simple Ogg/Vorbis playback, audio/video streaming to complex audio (mixing) and video (non-linear editing) processing. @@ -24,3 +28,6 @@ version | toolchain ``1.22.5`` | ``GCC/12.3.0`` ``1.6.4`` | ``foss/2016a`` ``1.8.3`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GTDB-Tk.md b/docs/version-specific/supported-software/g/GTDB-Tk.md index 2776561ff..55c2c1797 100644 --- a/docs/version-specific/supported-software/g/GTDB-Tk.md +++ b/docs/version-specific/supported-software/g/GTDB-Tk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GTDB-Tk A toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes. @@ -21,3 +25,6 @@ version | versionsuffix | toolchain ``2.3.2`` | | ``foss/2022a`` ``2.3.2`` | | ``foss/2023a`` ``2.4.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GTK+.md b/docs/version-specific/supported-software/g/GTK+.md index b055249f0..a51e69653 100644 --- a/docs/version-specific/supported-software/g/GTK+.md +++ b/docs/version-specific/supported-software/g/GTK+.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GTK+ The GTK+ 2 package contains libraries used for creating graphical user interfaces for applications. @@ -23,3 +27,6 @@ version | toolchain ``3.24.17`` | ``GCCcore/9.3.0`` ``3.24.23`` | ``GCCcore/10.2.0`` ``3.24.8`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GTK2.md b/docs/version-specific/supported-software/g/GTK2.md index 01206240d..fe962cdf8 100644 --- a/docs/version-specific/supported-software/g/GTK2.md +++ b/docs/version-specific/supported-software/g/GTK2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GTK2 The GTK+ 2 package contains libraries used for creating graphical user interfaces for applications. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.24.33`` | ``GCCcore/10.3.0`` ``2.24.33`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GTK3.md b/docs/version-specific/supported-software/g/GTK3.md index 453f900d6..f13bb7c22 100644 --- a/docs/version-specific/supported-software/g/GTK3.md +++ b/docs/version-specific/supported-software/g/GTK3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GTK3 GTK+ is the primary library used to construct user interfaces in GNOME. It provides all the user interface controls, or widgets, used in a common graphical application. Its object-oriented API allows you to construct user interfaces without dealing with the low-level details of drawing and device interaction. @@ -12,3 +16,6 @@ version | toolchain ``3.24.35`` | ``GCCcore/12.2.0`` ``3.24.37`` | ``GCCcore/12.3.0`` ``3.24.39`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GTK4.md b/docs/version-specific/supported-software/g/GTK4.md index cc064d578..98e880b7e 100644 --- a/docs/version-specific/supported-software/g/GTK4.md +++ b/docs/version-specific/supported-software/g/GTK4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GTK4 GTK+ is the primary library used to construct user interfaces in GNOME. It provides all the user interface controls, or widgets, used in a common graphical application. Its object-oriented API allows you to construct user interfaces without dealing with the low-level details of drawing and device interaction. @@ -9,3 +13,6 @@ version | toolchain ``4.11.3`` | ``GCC/12.2.0`` ``4.13.1`` | ``GCC/12.3.0`` ``4.7.0`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GTOOL.md b/docs/version-specific/supported-software/g/GTOOL.md index 089252f3e..bc5858a3d 100644 --- a/docs/version-specific/supported-software/g/GTOOL.md +++ b/docs/version-specific/supported-software/g/GTOOL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GTOOL GTOOL is a program for transforming sets of genotype data for use with the programs SNPTEST and IMPUTE. @@ -7,3 +11,6 @@ GTOOL is a program for transforming sets of genotype data for use with the prog version | toolchain --------|---------- ``0.7.5`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GTS.md b/docs/version-specific/supported-software/g/GTS.md index 019c8f0a3..1e7d1ab40 100644 --- a/docs/version-specific/supported-software/g/GTS.md +++ b/docs/version-specific/supported-software/g/GTS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GTS GTS stands for the GNU Triangulated Surface Library. It is an Open Source Free Software Library intended to provide a set of useful functions to deal with 3D surfaces meshed with interconnected triangles. @@ -23,3 +27,6 @@ version | toolchain ``0.7.6`` | ``intel/2016b`` ``0.7.6`` | ``intel/2018a`` ``20121130`` | ``foss/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GUIDANCE.md b/docs/version-specific/supported-software/g/GUIDANCE.md index 0dafe027b..ede49e770 100644 --- a/docs/version-specific/supported-software/g/GUIDANCE.md +++ b/docs/version-specific/supported-software/g/GUIDANCE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GUIDANCE GUIDANCE is a software package for aligning biological sequences (DNA or amino acids) using either MAFFT, PRANK, or CLUSTALW, and calculating confidence scores for each column, sequence and residue in the alignment. @@ -7,3 +11,6 @@ GUIDANCE is a software package for aligning biological sequences (DNA or amino a version | toolchain --------|---------- ``2.02`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GULP.md b/docs/version-specific/supported-software/g/GULP.md index fe2b71ba7..8a86e8cd6 100644 --- a/docs/version-specific/supported-software/g/GULP.md +++ b/docs/version-specific/supported-software/g/GULP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GULP GULP is a program for performing a variety of types of simulation on materials using boundary conditions of 0-D (molecules and clusters), 1-D (polymers), 2-D (surfaces, slabs and grain boundaries), or 3-D (periodic solids)Band Unfolding code for Plane-wave based calculations @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``5.1`` | ``intel/2019a`` ``6.1`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GUSHR.md b/docs/version-specific/supported-software/g/GUSHR.md index 3b02f79b1..515e73db2 100644 --- a/docs/version-specific/supported-software/g/GUSHR.md +++ b/docs/version-specific/supported-software/g/GUSHR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GUSHR Assembly-free construction of UTRs from short read RNA-Seq data on the basis of coding sequence annotation. @@ -7,3 +11,6 @@ Assembly-free construction of UTRs from short read RNA-Seq data on the basis of version | toolchain --------|---------- ``2020-09-28`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Gaia.md b/docs/version-specific/supported-software/g/Gaia.md index 30671b4fc..d930a3654 100644 --- a/docs/version-specific/supported-software/g/Gaia.md +++ b/docs/version-specific/supported-software/g/Gaia.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Gaia Gaia is a C++ library with python bindings which implements similarity measures and classifications on the results of audio analysis, and generates classification models that Essentia can use to compute high-level description of music. @@ -7,3 +11,6 @@ Gaia is a C++ library with python bindings which implements similarity measures version | versionsuffix | toolchain --------|---------------|---------- ``2.4.5`` | ``-Python-2.7.15`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GapCloser.md b/docs/version-specific/supported-software/g/GapCloser.md index 22a94cc64..ca03de4a8 100644 --- a/docs/version-specific/supported-software/g/GapCloser.md +++ b/docs/version-specific/supported-software/g/GapCloser.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GapCloser GapCloser is designed to close the gaps emerging during the scaffolding process by SOAPdenovo or other assembler, using the abundant pair relationships of short reads. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.12-r6`` | ``foss/2018a`` ``1.12-r6`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GapFiller.md b/docs/version-specific/supported-software/g/GapFiller.md index b055d221f..1bfb820b5 100644 --- a/docs/version-specific/supported-software/g/GapFiller.md +++ b/docs/version-specific/supported-software/g/GapFiller.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GapFiller GapFiller is a seed-and-extend local assembler to fill the gap within paired reads. It can be used for both DNA and RNA and it has been tested on Illumina data. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.1.1`` | ``intel/2017a`` ``2.1.2`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Gaussian.md b/docs/version-specific/supported-software/g/Gaussian.md index 605f940d2..75c56d00d 100644 --- a/docs/version-specific/supported-software/g/Gaussian.md +++ b/docs/version-specific/supported-software/g/Gaussian.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Gaussian Gaussian provides state-of-the-art capabilities for electronic structure modeling. Gaussian 09 is licensed for a wide variety of computer systems. All versions of Gaussian 09 contain every scientific/modeling feature, and none imposes any artificial limitations on calculations other than your computing resources and patience. This is the official gaussian AVX build. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``09.e.01`` | ``-AVX`` | ``system`` ``16.A.03`` | ``-AVX2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Gblocks.md b/docs/version-specific/supported-software/g/Gblocks.md index d4a26f8bc..ea843e0c8 100644 --- a/docs/version-specific/supported-software/g/Gblocks.md +++ b/docs/version-specific/supported-software/g/Gblocks.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Gblocks Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis @@ -7,3 +11,6 @@ Selection of conserved blocks from multiple alignments for their use in phylogen version | toolchain --------|---------- ``0.91b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Gctf.md b/docs/version-specific/supported-software/g/Gctf.md index 83e02ed86..63546762e 100644 --- a/docs/version-specific/supported-software/g/Gctf.md +++ b/docs/version-specific/supported-software/g/Gctf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Gctf Gctf: real-time CTF determination and correction, Kai Zhang, 2016 @@ -7,3 +11,6 @@ Gctf: real-time CTF determination and correction, Kai Zhang, 2016 version | toolchain --------|---------- ``1.06`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Gdk-Pixbuf.md b/docs/version-specific/supported-software/g/Gdk-Pixbuf.md index a05037054..dd8f956d2 100644 --- a/docs/version-specific/supported-software/g/Gdk-Pixbuf.md +++ b/docs/version-specific/supported-software/g/Gdk-Pixbuf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Gdk-Pixbuf The Gdk Pixbuf is a toolkit for image loading and pixel buffer manipulation. It is used by GTK+ 2 and GTK+ 3 to load and manipulate images. In the past it was distributed as part of GTK+ 2 but it was split off into a separate package in preparation for the change to GTK+ 3. @@ -30,3 +34,6 @@ version | toolchain ``2.42.6`` | ``GCCcore/10.3.0`` ``2.42.6`` | ``GCCcore/11.2.0`` ``2.42.8`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Gdspy.md b/docs/version-specific/supported-software/g/Gdspy.md index 764646e15..cd603bbf8 100644 --- a/docs/version-specific/supported-software/g/Gdspy.md +++ b/docs/version-specific/supported-software/g/Gdspy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Gdspy Gdspy is a Python module for creation and manipulation of GDSII stream files. @@ -7,3 +11,6 @@ Gdspy is a Python module for creation and manipulation of GDSII stream files. version | toolchain --------|---------- ``1.6.13`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Geant4-data.md b/docs/version-specific/supported-software/g/Geant4-data.md index 1056efe88..02e616c2f 100644 --- a/docs/version-specific/supported-software/g/Geant4-data.md +++ b/docs/version-specific/supported-software/g/Geant4-data.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Geant4-data Datasets for Geant4. @@ -9,3 +13,6 @@ version | toolchain ``11.1`` | ``system`` ``20201103`` | ``system`` ``20210510`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Geant4.md b/docs/version-specific/supported-software/g/Geant4.md index e8d0da7fe..d32735a2e 100644 --- a/docs/version-specific/supported-software/g/Geant4.md +++ b/docs/version-specific/supported-software/g/Geant4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Geant4 Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science. @@ -26,3 +30,6 @@ version | toolchain ``11.1.2`` | ``GCC/11.3.0`` ``9.5.p02`` | ``intel/2016a`` ``9.6.p04`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GenMap.md b/docs/version-specific/supported-software/g/GenMap.md index 309443807..9a0c707b8 100644 --- a/docs/version-specific/supported-software/g/GenMap.md +++ b/docs/version-specific/supported-software/g/GenMap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GenMap GenMap - Fast and Exact Computation of Genome Mappability @@ -7,3 +11,6 @@ GenMap - Fast and Exact Computation of Genome Mappability version | toolchain --------|---------- ``1.3.0`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GeneMark-ET.md b/docs/version-specific/supported-software/g/GeneMark-ET.md index ca324cd70..1b5f24109 100644 --- a/docs/version-specific/supported-software/g/GeneMark-ET.md +++ b/docs/version-specific/supported-software/g/GeneMark-ET.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GeneMark-ET Eukaryotic gene prediction suite with automatic training @@ -11,3 +15,6 @@ version | toolchain ``4.65`` | ``GCCcore/10.2.0`` ``4.71`` | ``GCCcore/11.2.0`` ``4.71`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GenerativeModels.md b/docs/version-specific/supported-software/g/GenerativeModels.md index a5d6de904..5a505fddc 100644 --- a/docs/version-specific/supported-software/g/GenerativeModels.md +++ b/docs/version-specific/supported-software/g/GenerativeModels.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GenerativeModels @@ -7,3 +11,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.2.1`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GenomeComb.md b/docs/version-specific/supported-software/g/GenomeComb.md index da99b8d1e..cb5f5500d 100644 --- a/docs/version-specific/supported-software/g/GenomeComb.md +++ b/docs/version-specific/supported-software/g/GenomeComb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GenomeComb Genomecomb is a package designed to analyze, combine, annotate and query genome as well as transcriptome sequencing data. @@ -7,3 +11,6 @@ Genomecomb is a package designed to analyze, combine, annotate and query genome version | versionsuffix | toolchain --------|---------------|---------- ``0.106.0`` | ``-x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GenomeMapper.md b/docs/version-specific/supported-software/g/GenomeMapper.md index 4f24b9634..4d4404f04 100644 --- a/docs/version-specific/supported-software/g/GenomeMapper.md +++ b/docs/version-specific/supported-software/g/GenomeMapper.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GenomeMapper GenomeMapper is a short read mapping tool designed for accurate read alignments. It quickly aligns millions of reads either with ungapped or gapped alignments. This version is used to align against a single reference. If you are unsure which one is the appropriate GenomeMapper, you might want to use this one. @@ -7,3 +11,6 @@ GenomeMapper is a short read mapping tool designed for accurate read alignments. version | toolchain --------|---------- ``0.4.4`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GenomeTester4.md b/docs/version-specific/supported-software/g/GenomeTester4.md index 01ff55d8f..37dbb1d8a 100644 --- a/docs/version-specific/supported-software/g/GenomeTester4.md +++ b/docs/version-specific/supported-software/g/GenomeTester4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GenomeTester4 A toolkit for performing set operations - union, intersection and complement - on k-mer lists. @@ -7,3 +11,6 @@ A toolkit for performing set operations - union, intersection and complement - o version | toolchain --------|---------- ``4.0`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GenomeThreader.md b/docs/version-specific/supported-software/g/GenomeThreader.md index a78c5b6dc..6c7873ba3 100644 --- a/docs/version-specific/supported-software/g/GenomeThreader.md +++ b/docs/version-specific/supported-software/g/GenomeThreader.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GenomeThreader GenomeThreader is a software tool to compute gene structure predictions. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.7.1`` | ``-Linux_x86_64-64bit`` | ``system`` ``1.7.3`` | ``-Linux_x86_64-64bit`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GenomeTools.md b/docs/version-specific/supported-software/g/GenomeTools.md index 376eec2a5..a95ba0fbe 100644 --- a/docs/version-specific/supported-software/g/GenomeTools.md +++ b/docs/version-specific/supported-software/g/GenomeTools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GenomeTools A comprehensive software library for efficient processing of structured genome annotations. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``1.6.2`` | | ``GCC/10.3.0`` ``1.6.2`` | | ``GCC/11.3.0`` ``1.6.2`` | | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GenomeWorks.md b/docs/version-specific/supported-software/g/GenomeWorks.md index dfe9ab374..373d326f7 100644 --- a/docs/version-specific/supported-software/g/GenomeWorks.md +++ b/docs/version-specific/supported-software/g/GenomeWorks.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GenomeWorks SDK for GPU accelerated genome assembly and analysis @@ -7,3 +11,6 @@ SDK for GPU accelerated genome assembly and analysis version | toolchain --------|---------- ``2021.02.2`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Genome_Profiler.md b/docs/version-specific/supported-software/g/Genome_Profiler.md index 16bbb68aa..287ecb6ee 100644 --- a/docs/version-specific/supported-software/g/Genome_Profiler.md +++ b/docs/version-specific/supported-software/g/Genome_Profiler.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Genome_Profiler Genome Profiler (GeP) is a program to perform whole-genome multilocus sequence typing (wgMLST) analysis for bacterial isolates @@ -7,3 +11,6 @@ Genome Profiler (GeP) is a program to perform whole-genome multilocus sequence version | versionsuffix | toolchain --------|---------------|---------- ``2.1`` | ``-Perl-5.24.0`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GenotypeHarmonizer.md b/docs/version-specific/supported-software/g/GenotypeHarmonizer.md index ea22923ff..eb7135874 100644 --- a/docs/version-specific/supported-software/g/GenotypeHarmonizer.md +++ b/docs/version-specific/supported-software/g/GenotypeHarmonizer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GenotypeHarmonizer The Genotype Harmonizer is an easy to use command-line tool that allows harmonization of genotype data stored using different file formats with different and potentially unknown strands. @@ -7,3 +11,6 @@ The Genotype Harmonizer is an easy to use command-line tool that allows harmoniz version | versionsuffix | toolchain --------|---------------|---------- ``1.4.14`` | ``-Java-1.7.0_80`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Gerris.md b/docs/version-specific/supported-software/g/Gerris.md index a9cd92b23..af899674d 100644 --- a/docs/version-specific/supported-software/g/Gerris.md +++ b/docs/version-specific/supported-software/g/Gerris.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Gerris Gerris is a Free Software program for the solution of the partial differential equations describing fluid flow @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20131206`` | ``foss/2017b`` ``20131206`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GetOrganelle.md b/docs/version-specific/supported-software/g/GetOrganelle.md index f84fdcbb0..8575784f0 100644 --- a/docs/version-specific/supported-software/g/GetOrganelle.md +++ b/docs/version-specific/supported-software/g/GetOrganelle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GetOrganelle This toolkit assemblies organelle genome from genomic skimming data. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``1.7.5.3`` | | ``foss/2021b`` ``1.7.6.1`` | | ``foss/2021b`` ``1.7.7.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GffCompare.md b/docs/version-specific/supported-software/g/GffCompare.md index 888fa793b..ae1af62dd 100644 --- a/docs/version-specific/supported-software/g/GffCompare.md +++ b/docs/version-specific/supported-software/g/GffCompare.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GffCompare GffCompare provides classification and reference annotation mapping and matching statistics for RNA-Seq assemblies (transfrags) or other generic GFF/GTF files. @@ -12,3 +16,6 @@ version | toolchain ``0.11.6`` | ``GCCcore/9.3.0`` ``0.12.2`` | ``GCC/10.3.0`` ``0.12.6`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Ghostscript.md b/docs/version-specific/supported-software/g/Ghostscript.md index 131444fea..b9cd47993 100644 --- a/docs/version-specific/supported-software/g/Ghostscript.md +++ b/docs/version-specific/supported-software/g/Ghostscript.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Ghostscript Ghostscript is a versatile processor for PostScript data with the ability to render PostScript to different targets. It used to be part of the cups printing stack, but is no longer used for that. @@ -28,3 +32,6 @@ version | versionsuffix | toolchain ``9.54.0`` | | ``GCCcore/10.3.0`` ``9.54.0`` | | ``GCCcore/11.2.0`` ``9.56.1`` | | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Gibbs2.md b/docs/version-specific/supported-software/g/Gibbs2.md index be397e5f7..91c786eb1 100644 --- a/docs/version-specific/supported-software/g/Gibbs2.md +++ b/docs/version-specific/supported-software/g/Gibbs2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Gibbs2 Gibbs2 is a program for the calculation of thermodynamic properties in periodic solids under arbitrary conditions of temperature and pressure. Gibbs2 uses the results of periodic solid-state quantum-mechanical calculations, specifically the energy-volume curve and possibly the harmonic phonon frequencies, to compute the thermodynamic properties of the solid within the framework of the quasiharmonic approximation. @@ -7,3 +11,6 @@ Gibbs2 is a program for the calculation of thermodynamic properties in periodic version | toolchain --------|---------- ``1.0`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GimmeMotifs.md b/docs/version-specific/supported-software/g/GimmeMotifs.md index 7f394a792..644fb227f 100644 --- a/docs/version-specific/supported-software/g/GimmeMotifs.md +++ b/docs/version-specific/supported-software/g/GimmeMotifs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GimmeMotifs Suite of motif tools, including a motif prediction pipeline for ChIP-seq experiments @@ -7,3 +11,6 @@ Suite of motif tools, including a motif prediction pipeline for ChIP-seq experim version | toolchain --------|---------- ``0.17.2`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Giotto-Suite.md b/docs/version-specific/supported-software/g/Giotto-Suite.md index 781d03e11..2e4935313 100644 --- a/docs/version-specific/supported-software/g/Giotto-Suite.md +++ b/docs/version-specific/supported-software/g/Giotto-Suite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Giotto-Suite Giotto Suite is focused on building a modular platform for analyzing spatial-omics technologies and strives to be interoperable with other popular spatial analysis tools and classes. Using established packages optimized for large(r) data, Giotto Suite adopts fast and memory efficient methods to create an interactive analysis. @@ -7,3 +11,6 @@ Giotto Suite is focused on building a modular platform for analyzing spatial-omi version | versionsuffix | toolchain --------|---------------|---------- ``3.0.1`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GitPython.md b/docs/version-specific/supported-software/g/GitPython.md index 6fe42234c..c08dc4c81 100644 --- a/docs/version-specific/supported-software/g/GitPython.md +++ b/docs/version-specific/supported-software/g/GitPython.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GitPython GitPython is a python library used to interact with Git repositories @@ -19,3 +23,6 @@ version | versionsuffix | toolchain ``3.1.40`` | | ``GCCcore/12.3.0`` ``3.1.42`` | | ``GCCcore/13.2.0`` ``3.1.9`` | ``-Python-3.8.2`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Givaro.md b/docs/version-specific/supported-software/g/Givaro.md index a7c61aa93..13915f2c7 100644 --- a/docs/version-specific/supported-software/g/Givaro.md +++ b/docs/version-specific/supported-software/g/Givaro.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Givaro C++ library for arithmetic and algebraic computations @@ -9,3 +13,6 @@ version | toolchain ``4.0.1`` | ``foss/2016a`` ``4.2.0`` | ``GCCcore/11.3.0`` ``4.2.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Giza.md b/docs/version-specific/supported-software/g/Giza.md index 4dde9fbd5..0ab00bb80 100644 --- a/docs/version-specific/supported-software/g/Giza.md +++ b/docs/version-specific/supported-software/g/Giza.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Giza Giza is an open, lightweight scientific plotting library built on top of cairo that provides uniform output to multiple devices. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.1.0`` | ``foss/2018b`` ``1.4.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Glade.md b/docs/version-specific/supported-software/g/Glade.md index 40557b2f2..b775024c8 100644 --- a/docs/version-specific/supported-software/g/Glade.md +++ b/docs/version-specific/supported-software/g/Glade.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Glade Glade is a RAD tool to enable quick & easy development of user interfaces for the GTK+ toolkit and the GNOME desktop environment. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``3.8.5`` | ``-Python-2.7.14`` | ``intel/2017b`` ``3.8.6`` | ``-Python-2.7.15`` | ``foss/2018b`` ``3.8.6`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GlimmerHMM.md b/docs/version-specific/supported-software/g/GlimmerHMM.md index 6bc910eef..6f5c91d51 100644 --- a/docs/version-specific/supported-software/g/GlimmerHMM.md +++ b/docs/version-specific/supported-software/g/GlimmerHMM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GlimmerHMM GlimmerHMM is a new gene finder based on a Generalized Hidden Markov Model. Although the gene finder conforms to the overall mathematical framework of a GHMM, additionally it incorporates splice site models adapted from the GeneSplicer program and a decision tree adapted from GlimmerM. It also utilizes Interpolated Markov Models for the coding and noncoding models. @@ -11,3 +15,6 @@ version | toolchain ``3.0.4c`` | ``GCC/10.2.0`` ``3.0.4c`` | ``GCC/11.2.0`` ``3.0.4c`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GlobalArrays.md b/docs/version-specific/supported-software/g/GlobalArrays.md index 4fd7b074b..31868b5ba 100644 --- a/docs/version-specific/supported-software/g/GlobalArrays.md +++ b/docs/version-specific/supported-software/g/GlobalArrays.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GlobalArrays Global Arrays (GA) is a Partitioned Global Address Space (PGAS) programming model @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``5.8.1`` | | ``intel/2022a`` ``5.8.2`` | | ``intel/2022a`` ``5.8.2`` | | ``intel/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Globus-CLI.md b/docs/version-specific/supported-software/g/Globus-CLI.md index 900705cae..c7121803a 100644 --- a/docs/version-specific/supported-software/g/Globus-CLI.md +++ b/docs/version-specific/supported-software/g/Globus-CLI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Globus-CLI A Command Line Wrapper over the Globus SDK for Python, which provides an interface to Globus services from the shell, and is suited to both interactive and simple scripting use cases. @@ -10,3 +14,6 @@ version | toolchain ``3.1.1`` | ``GCCcore/10.2.0`` ``3.2.0`` | ``GCCcore/10.3.0`` ``3.6.0`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GlobusConnectPersonal.md b/docs/version-specific/supported-software/g/GlobusConnectPersonal.md index 90255cd79..190388a84 100644 --- a/docs/version-specific/supported-software/g/GlobusConnectPersonal.md +++ b/docs/version-specific/supported-software/g/GlobusConnectPersonal.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GlobusConnectPersonal Globus Connect Personal turns your laptop or other personal computer into a Globus endpoint with a just a few clicks. With Globus Connect Personal you can share and transfer files to/from a local machine—campus server, desktop computer or laptop—even if it's behind a firewall and you don't have administrator privileges. @@ -7,3 +11,6 @@ Globus Connect Personal turns your laptop or other personal computer into a Glo version | toolchain --------|---------- ``2.3.6`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Glucose.md b/docs/version-specific/supported-software/g/Glucose.md index 33935a1ff..4b8105837 100644 --- a/docs/version-specific/supported-software/g/Glucose.md +++ b/docs/version-specific/supported-software/g/Glucose.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Glucose Glucose is based on a new scoring scheme (well, not so new now, it was introduced in 2009) for the clause learning mechanism of so called Modern SAT solvers (it is based on our IJCAI'09 paper). It is designed to be parallel, since v4.0. @@ -7,3 +11,6 @@ Glucose is based on a new scoring scheme (well, not so new now, it was introduce version | toolchain --------|---------- ``4.1`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GnuTLS.md b/docs/version-specific/supported-software/g/GnuTLS.md index edd241bca..6fb84770c 100644 --- a/docs/version-specific/supported-software/g/GnuTLS.md +++ b/docs/version-specific/supported-software/g/GnuTLS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GnuTLS GnuTLS is a secure communications library implementing the SSL, TLS and DTLS protocols and technologies around them. It provides a simple C language application programming interface (API) to access the secure communications protocols as well as APIs to parse and write X.509, PKCS #12, OpenPGP and other required structures. It is aimed to be portable and efficient with focus on security and interoperability. @@ -13,3 +17,6 @@ version | toolchain ``3.7.3`` | ``GCCcore/11.2.0`` ``3.7.8`` | ``GCCcore/11.3.0`` ``3.7.8`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Go.md b/docs/version-specific/supported-software/g/Go.md index 39e938c48..1a4dd8248 100644 --- a/docs/version-specific/supported-software/g/Go.md +++ b/docs/version-specific/supported-software/g/Go.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Go Go is an open source programming language that makes it easy to build simple, reliable, and efficient software. @@ -28,3 +32,6 @@ version | toolchain ``1.4.2`` | ``GCC/4.8.4`` ``1.5`` | ``GCC/4.8.4`` ``1.8.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Godon.md b/docs/version-specific/supported-software/g/Godon.md index f054bf60a..365b32471 100644 --- a/docs/version-specific/supported-software/g/Godon.md +++ b/docs/version-specific/supported-software/g/Godon.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Godon Godon is codon models software written in Go. @@ -7,3 +11,6 @@ Godon is codon models software written in Go. version | versionsuffix | toolchain --------|---------------|---------- ``20210913`` | ``-x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GraPhlAn.md b/docs/version-specific/supported-software/g/GraPhlAn.md index 407b10f7a..4ed951b73 100644 --- a/docs/version-specific/supported-software/g/GraPhlAn.md +++ b/docs/version-specific/supported-software/g/GraPhlAn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GraPhlAn GraPhlAn is a software tool for producing high-quality circular representations of taxonomic and phylogenetic trees. It focuses on concise, integrative, informative, and publication-ready representations of phylogenetically- and taxonomically-driven investigation. @@ -7,3 +11,6 @@ GraPhlAn is a software tool for producing high-quality circular representations version | versionsuffix | toolchain --------|---------------|---------- ``1.1.3`` | ``-Python-2.7.16`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Grace.md b/docs/version-specific/supported-software/g/Grace.md index a83b5297a..5535387e5 100644 --- a/docs/version-specific/supported-software/g/Grace.md +++ b/docs/version-specific/supported-software/g/Grace.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Grace Grace is a WYSIWYG 2D plotting tool for X Windows System and Motif. @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``5.1.25`` | ``-5build1`` | ``intel/2017b`` ``5.1.25`` | ``-5build1`` | ``intel/2019a`` ``5.1.25`` | ``-5build1`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Gradle.md b/docs/version-specific/supported-software/g/Gradle.md index d54d29aa0..471be6554 100644 --- a/docs/version-specific/supported-software/g/Gradle.md +++ b/docs/version-specific/supported-software/g/Gradle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Gradle Complete Gradle install. From mobile apps to microservices, from small startups to big enterprises, Gradle helps teams build, automate and deliver better software, faster. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``6.1.1`` | | ``system`` ``6.9.1`` | | ``system`` ``8.6`` | ``-Java-17`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GraphDB.md b/docs/version-specific/supported-software/g/GraphDB.md index ea7a08dd9..3711cd39e 100644 --- a/docs/version-specific/supported-software/g/GraphDB.md +++ b/docs/version-specific/supported-software/g/GraphDB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GraphDB GraphDB is an enterprise ready Semantic Graph Database, compliant with W3C Standards. Semantic graph databases (also called RDF triplestores) provide the core infrastructure for solutions where modelling agility, data integration, relationship exploration and cross-enterprise data publishing and consumption are important. @@ -7,3 +11,6 @@ GraphDB is an enterprise ready Semantic Graph Database, compliant with W3C Stand version | toolchain --------|---------- ``10.1.5`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GraphMap.md b/docs/version-specific/supported-software/g/GraphMap.md index d1d3389d7..7d26104b3 100644 --- a/docs/version-specific/supported-software/g/GraphMap.md +++ b/docs/version-specific/supported-software/g/GraphMap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GraphMap A highly sensitive and accurate mapper for long, error-prone reads @@ -7,3 +11,6 @@ A highly sensitive and accurate mapper for long, error-prone reads version | toolchain --------|---------- ``0.5.2`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GraphMap2.md b/docs/version-specific/supported-software/g/GraphMap2.md index 48d1e91af..ad90f3afc 100644 --- a/docs/version-specific/supported-software/g/GraphMap2.md +++ b/docs/version-specific/supported-software/g/GraphMap2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GraphMap2 A highly sensitive and accurate mapper for long, error-prone reads @@ -7,3 +11,6 @@ A highly sensitive and accurate mapper for long, error-prone reads version | toolchain --------|---------- ``0.6.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Graphene.md b/docs/version-specific/supported-software/g/Graphene.md index bdf27a6bf..f8bd05fa4 100644 --- a/docs/version-specific/supported-software/g/Graphene.md +++ b/docs/version-specific/supported-software/g/Graphene.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Graphene Graphene is a thin layer of types for graphic libraries @@ -11,3 +15,6 @@ version | toolchain ``1.10.8`` | ``GCCcore/12.3.0`` ``1.10.8`` | ``GCCcore/13.2.0`` ``1.6.0`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GraphicsMagick.md b/docs/version-specific/supported-software/g/GraphicsMagick.md index 19494f47d..5af519f4e 100644 --- a/docs/version-specific/supported-software/g/GraphicsMagick.md +++ b/docs/version-specific/supported-software/g/GraphicsMagick.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GraphicsMagick GraphicsMagick is the swiss army knife of image processing. @@ -16,3 +20,6 @@ version | toolchain ``1.3.34`` | ``foss/2019b`` ``1.3.36`` | ``GCCcore/11.2.0`` ``1.3.36`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Graphviz.md b/docs/version-specific/supported-software/g/Graphviz.md index b5a825103..b9bf5da72 100644 --- a/docs/version-specific/supported-software/g/Graphviz.md +++ b/docs/version-specific/supported-software/g/Graphviz.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Graphviz Graphviz is open source graph visualization software. Graph visualization is a way of representing structural information as diagrams of abstract graphs and networks. It has important applications in networking, bioinformatics, software engineering, database and web design, machine learning, and in visual interfaces for other technical domains. @@ -22,3 +26,6 @@ version | versionsuffix | toolchain ``5.0.0`` | | ``GCCcore/11.3.0`` ``8.1.0`` | | ``GCCcore/12.2.0`` ``8.1.0`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Greenlet.md b/docs/version-specific/supported-software/g/Greenlet.md index 818d38e20..c0badbf68 100644 --- a/docs/version-specific/supported-software/g/Greenlet.md +++ b/docs/version-specific/supported-software/g/Greenlet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Greenlet The greenlet package is a spin-off of Stackless, a version of CPython that supports micro-threads called "tasklets". Tasklets run pseudo-concurrently (typically in a single or a few OS-level threads) and are synchronized with data exchanges on "channels". A "greenlet", on the other hand, is a still more primitive notion of micro-thread with no implicit scheduling; coroutines, in other words. This is useful when you want to control exactly when your code runs. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``2.0.2`` | | ``GCCcore/12.3.0`` ``3.0.2`` | | ``GCCcore/12.3.0`` ``3.0.3`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Grep.md b/docs/version-specific/supported-software/g/Grep.md index 30e565b66..2d5c16d33 100644 --- a/docs/version-specific/supported-software/g/Grep.md +++ b/docs/version-specific/supported-software/g/Grep.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Grep The grep command searches one or more input files for lines containing a match to a specified pattern. By default, grep prints the matching lines. @@ -7,3 +11,6 @@ The grep command searches one or more input files for lines containing a match t version | toolchain --------|---------- ``2.21`` | ``GCC/4.9.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GroIMP.md b/docs/version-specific/supported-software/g/GroIMP.md index 3ff2c16b9..37edf3b5c 100644 --- a/docs/version-specific/supported-software/g/GroIMP.md +++ b/docs/version-specific/supported-software/g/GroIMP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GroIMP GroIMP (Growth Grammar-related Interactive Modelling Platform) is a 3D-modelling platform. @@ -7,3 +11,6 @@ GroIMP (Growth Grammar-related Interactive Modelling Platform) is a 3D-modelling version | toolchain --------|---------- ``1.5`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GromacsWrapper.md b/docs/version-specific/supported-software/g/GromacsWrapper.md index 186b8abd3..af507c473 100644 --- a/docs/version-specific/supported-software/g/GromacsWrapper.md +++ b/docs/version-specific/supported-software/g/GromacsWrapper.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GromacsWrapper GromacsWrapper is a python package that wraps system calls to Gromacs tools into thin classes. This allows for fairly seamless integration of the gromacs tools into python scripts. @@ -7,3 +11,6 @@ GromacsWrapper is a python package that wraps system calls to Gromacs tools into version | versionsuffix | toolchain --------|---------------|---------- ``0.8.0`` | ``-Python-3.7.2`` | ``fosscuda/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Groovy.md b/docs/version-specific/supported-software/g/Groovy.md index 2cc6e1f30..c51c41e1a 100644 --- a/docs/version-specific/supported-software/g/Groovy.md +++ b/docs/version-specific/supported-software/g/Groovy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Groovy Groovy is a powerful, optionally typed and dynamic language, with static-typing and static compilation capabilities, for the Java platform aimed at improving developer productivity thanks to a concise, familiar and easy to learn syntax. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.5.9`` | ``-Java-11`` | ``system`` ``4.0.3`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/GtkSourceView.md b/docs/version-specific/supported-software/g/GtkSourceView.md index 1c11e52ce..18221dd49 100644 --- a/docs/version-specific/supported-software/g/GtkSourceView.md +++ b/docs/version-specific/supported-software/g/GtkSourceView.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # GtkSourceView GtkSourceView is a GNOME library that extends GtkTextView, the standard GTK+ widget for multiline text editing. GtkSourceView adds support for syntax highlighting, undo/redo, file loading and saving, search and replace, a completion system, printing, displaying line numbers, and other features typical of a source code editor. @@ -9,3 +13,6 @@ version | toolchain ``3.24.11`` | ``GCCcore/10.2.0`` ``3.24.11`` | ``GCCcore/8.2.0`` ``4.4.0`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Guile.md b/docs/version-specific/supported-software/g/Guile.md index 1ef75e88d..cea2e0f7d 100644 --- a/docs/version-specific/supported-software/g/Guile.md +++ b/docs/version-specific/supported-software/g/Guile.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Guile Guile is the GNU Ubiquitous Intelligent Language for Extensions, the official extension language for the GNU operating system. @@ -28,3 +32,6 @@ version | toolchain ``3.0.8`` | ``GCCcore/11.3.0`` ``3.0.9`` | ``GCCcore/10.2.0`` ``3.0.9`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/Gurobi.md b/docs/version-specific/supported-software/g/Gurobi.md index be28366a3..9a220891e 100644 --- a/docs/version-specific/supported-software/g/Gurobi.md +++ b/docs/version-specific/supported-software/g/Gurobi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Gurobi The Gurobi Optimizer is a state-of-the-art solver for mathematical programming. The solvers in the Gurobi Optimizer were designed from the ground up to exploit modern architectures and multi-core processors, using the most advanced implementations of the latest algorithms. @@ -31,3 +35,6 @@ version | versionsuffix | toolchain ``9.5.0`` | | ``GCCcore/10.3.0`` ``9.5.0`` | | ``GCCcore/11.2.0`` ``9.5.2`` | | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/g2clib.md b/docs/version-specific/supported-software/g/g2clib.md index 488ca5cde..da01410c0 100644 --- a/docs/version-specific/supported-software/g/g2clib.md +++ b/docs/version-specific/supported-software/g/g2clib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # g2clib Library contains GRIB2 encoder/decoder ('C' version). @@ -17,3 +21,6 @@ version | toolchain ``1.6.3`` | ``GCCcore/10.3.0`` ``1.6.3`` | ``GCCcore/11.2.0`` ``1.7.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/g2lib.md b/docs/version-specific/supported-software/g/g2lib.md index 8a5a7f3c1..f97df74c5 100644 --- a/docs/version-specific/supported-software/g/g2lib.md +++ b/docs/version-specific/supported-software/g/g2lib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # g2lib Library contains GRIB2 encoder/decoder and search/indexing routines. @@ -15,3 +19,6 @@ version | toolchain ``3.1.0`` | ``intel/2018b`` ``3.2.0`` | ``GCCcore/10.2.0`` ``3.2.0`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/g2log.md b/docs/version-specific/supported-software/g/g2log.md index 017581715..a53ea675b 100644 --- a/docs/version-specific/supported-software/g/g2log.md +++ b/docs/version-specific/supported-software/g/g2log.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # g2log g2log, efficient asynchronous logger using C++11 @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0`` | ``GCCcore/8.3.0`` ``1.0`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gRPC.md b/docs/version-specific/supported-software/g/gRPC.md index 4dc4609ad..05e473245 100644 --- a/docs/version-specific/supported-software/g/gRPC.md +++ b/docs/version-specific/supported-software/g/gRPC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gRPC gRPC is a modern, open source, high-performance remote procedure call (RPC) framework that can run anywhere. gRPC enables client and server applications to communicate transparently, and simplifies the building of connected systems. @@ -9,3 +13,6 @@ version | toolchain ``1.44.0`` | ``GCCcore/11.2.0`` ``1.57.0`` | ``GCCcore/12.3.0`` ``1.62.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gSOAP.md b/docs/version-specific/supported-software/g/gSOAP.md index 043dea108..c5f3e824d 100644 --- a/docs/version-specific/supported-software/g/gSOAP.md +++ b/docs/version-specific/supported-software/g/gSOAP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gSOAP The gSOAP toolkit is a C and C++ software development toolkit for SOAP and REST XML Web services and generic C/C++ XML data bindings. The toolkit analyzes WSDLs and XML schemas (separately or as a combined set) and maps the XML schema types and the SOAP/REST XML messaging protocols to easy-to-use and efficient C and C++ code. It also supports exposing (legacy) C and C++ applications as XML Web services by auto-generating XML serialization code and WSDL specifications. Or you can simply use it to automatically convert XML to/from C and C++ data. The toolkit supports options to generate pure ANSI C or C++ with or without STL. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.8.100`` | ``GCCcore/8.3.0`` ``2.8.48`` | ``GCCcore/6.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gap.md b/docs/version-specific/supported-software/g/gap.md index 02e9d4082..f6533f020 100644 --- a/docs/version-specific/supported-software/g/gap.md +++ b/docs/version-specific/supported-software/g/gap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gap GAP is a system for computational discrete algebra, with particular emphasis on Computational Group Theory. @@ -9,3 +13,6 @@ version | toolchain ``4.11.0`` | ``foss/2019a`` ``4.12.2`` | ``foss/2022a`` ``4.9.3`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gappa.md b/docs/version-specific/supported-software/g/gappa.md index 5677d8ca2..364eb910c 100644 --- a/docs/version-specific/supported-software/g/gappa.md +++ b/docs/version-specific/supported-software/g/gappa.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gappa gappa is a collection of commands for working with phylogenetic data. Its main focus are evolutionary placements of short environmental sequences on a reference phylogenetic tree. Such data is typically produced by tools like EPA-ng, RAxML-EPA or pplacer and usually stored in jplace files. @@ -7,3 +11,6 @@ gappa is a collection of commands for working with phylogenetic data. Its main f version | toolchain --------|---------- ``0.7.1`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/garnett.md b/docs/version-specific/supported-software/g/garnett.md index 300b4ce84..73e4525c3 100644 --- a/docs/version-specific/supported-software/g/garnett.md +++ b/docs/version-specific/supported-software/g/garnett.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # garnett Garnett is a software package that faciliates automated cell type classification from single-cell expression data. @@ -7,3 +11,6 @@ Garnett is a software package that faciliates automated cell type classification version | versionsuffix | toolchain --------|---------------|---------- ``0.1.20`` | ``-R-4.0.3`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gawk.md b/docs/version-specific/supported-software/g/gawk.md index 6eecf98cc..c9feb0f17 100644 --- a/docs/version-specific/supported-software/g/gawk.md +++ b/docs/version-specific/supported-software/g/gawk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gawk The awk utility interprets a special-purpose programming language that makes it possible to handle simple data-reformatting jobs with just a few lines of code. @@ -12,3 +16,6 @@ version | toolchain ``5.1.1`` | ``GCC/11.3.0`` ``5.3.0`` | ``GCC/12.2.0`` ``5.3.0`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gbasis.md b/docs/version-specific/supported-software/g/gbasis.md index b8303c754..7f2ea26ba 100644 --- a/docs/version-specific/supported-software/g/gbasis.md +++ b/docs/version-specific/supported-software/g/gbasis.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gbasis Python library for analytical evaluation and integration of Gaussian-type basis functions and related quantities. @@ -7,3 +11,6 @@ Python library for analytical evaluation and integration of Gaussian-type basis version | toolchain --------|---------- ``20210904`` | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gbs2ploidy.md b/docs/version-specific/supported-software/g/gbs2ploidy.md index 8770a37f0..99e1201fc 100644 --- a/docs/version-specific/supported-software/g/gbs2ploidy.md +++ b/docs/version-specific/supported-software/g/gbs2ploidy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gbs2ploidy Inference of Ploidy from (Genotyping-by-Sequencing) GBS Data @@ -7,3 +11,6 @@ Inference of Ploidy from (Genotyping-by-Sequencing) GBS Data version | versionsuffix | toolchain --------|---------------|---------- ``1.0`` | ``-R-3.4.3`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gc.md b/docs/version-specific/supported-software/g/gc.md index df03308b7..9a7130fce 100644 --- a/docs/version-specific/supported-software/g/gc.md +++ b/docs/version-specific/supported-software/g/gc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gc The Boehm-Demers-Weiser conservative garbage collector can be used as a garbage collecting replacement for C malloc or C++ new. @@ -19,3 +23,6 @@ version | toolchain ``8.2.2`` | ``GCCcore/11.3.0`` ``8.2.4`` | ``GCCcore/12.3.0`` ``8.2.6`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gcccuda.md b/docs/version-specific/supported-software/g/gcccuda.md index 632620aa4..448ad8966 100644 --- a/docs/version-specific/supported-software/g/gcccuda.md +++ b/docs/version-specific/supported-software/g/gcccuda.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gcccuda GNU Compiler Collection (GCC) based compiler toolchain, along with CUDA toolkit. @@ -14,3 +18,6 @@ version | toolchain ``2019b`` | ``system`` ``2020a`` | ``system`` ``2020b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gcloud.md b/docs/version-specific/supported-software/g/gcloud.md index 629d5091b..94a37f022 100644 --- a/docs/version-specific/supported-software/g/gcloud.md +++ b/docs/version-specific/supported-software/g/gcloud.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gcloud Libraries and tools for interacting with Google Cloud products and services. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``382.0.0`` | ``system`` ``472.0.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gcsfs.md b/docs/version-specific/supported-software/g/gcsfs.md index 466561b13..a1d4af50f 100644 --- a/docs/version-specific/supported-software/g/gcsfs.md +++ b/docs/version-specific/supported-software/g/gcsfs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gcsfs Pythonic file-system interface for Google Cloud Storage. @@ -7,3 +11,6 @@ Pythonic file-system interface for Google Cloud Storage. version | toolchain --------|---------- ``2023.12.2.post1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gdbgui.md b/docs/version-specific/supported-software/g/gdbgui.md index 98fb1c677..28afd2368 100644 --- a/docs/version-specific/supported-software/g/gdbgui.md +++ b/docs/version-specific/supported-software/g/gdbgui.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gdbgui Browser-based frontend to gdb (gnu debugger). Add breakpoints, view the stack, visualize data structures, and more in C, C++, Go, Rust, and Fortran. Run gdbgui from the terminal and a new tab will open in your browser. @@ -7,3 +11,6 @@ Browser-based frontend to gdb (gnu debugger). Add breakpoints, view the stack, v version | versionsuffix | toolchain --------|---------------|---------- ``0.13.1.2`` | ``-Python-3.7.2`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gdbm.md b/docs/version-specific/supported-software/g/gdbm.md index d0c54be14..9cefdf69b 100644 --- a/docs/version-specific/supported-software/g/gdbm.md +++ b/docs/version-specific/supported-software/g/gdbm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gdbm GNU dbm (or GDBM, for short) is a library of database functions that use extensible hashing and work similar to the standard UNIX dbm. These routines are provided to a programmer needing to create and manipulate a hashed database. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.18.1`` | ``foss/2020a`` ``1.21`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gdc-client.md b/docs/version-specific/supported-software/g/gdc-client.md index 5a249edc7..443df1a72 100644 --- a/docs/version-specific/supported-software/g/gdc-client.md +++ b/docs/version-specific/supported-software/g/gdc-client.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gdc-client The gdc-client provides several convenience functions over the GDC API which provides general download/upload via HTTPS. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``1.3.0`` | ``-Python-2.7.15`` | ``foss/2018b`` ``1.3.0`` | ``-Python-2.7.14`` | ``intel/2017b`` ``1.6.0`` | | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gdist.md b/docs/version-specific/supported-software/g/gdist.md index 75e8f1fe6..c5742582a 100644 --- a/docs/version-specific/supported-software/g/gdist.md +++ b/docs/version-specific/supported-software/g/gdist.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gdist The gdist module is a Cython interface to a C++ library (http://code.google.com/p/geodesic/) for computing geodesic distance which is the length of shortest line between two vertices on a triangulated mesh in three dimensions, such that the line lies on the surface. @@ -7,3 +11,6 @@ The gdist module is a Cython interface to a C++ library (http://code.google.com/ version | versionsuffix | toolchain --------|---------------|---------- ``1.0.3`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gearshifft.md b/docs/version-specific/supported-software/g/gearshifft.md index 8445b42b3..4f1d1d3c8 100644 --- a/docs/version-specific/supported-software/g/gearshifft.md +++ b/docs/version-specific/supported-software/g/gearshifft.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gearshifft Benchmark Suite for Heterogenuous FFT Implementations @@ -7,3 +11,6 @@ Benchmark Suite for Heterogenuous FFT Implementations version | toolchain --------|---------- ``0.4.0`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gemelli.md b/docs/version-specific/supported-software/g/gemelli.md index 67b1c8752..017cc491d 100644 --- a/docs/version-specific/supported-software/g/gemelli.md +++ b/docs/version-specific/supported-software/g/gemelli.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gemelli Gemelli is a tool box for running both Robust Aitchison PCA (RPCA) and Compositional Tensor Factorization (CTF) on sparse compositional omics datasets. @@ -7,3 +11,6 @@ Gemelli is a tool box for running both Robust Aitchison PCA (RPCA) and Compositi version | toolchain --------|---------- ``0.0.9`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gemmi.md b/docs/version-specific/supported-software/g/gemmi.md index d79104eb9..0ef10b422 100644 --- a/docs/version-specific/supported-software/g/gemmi.md +++ b/docs/version-specific/supported-software/g/gemmi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gemmi Gemmi is a library, accompanied by a set of programs, developed primarily for use in macromolecular crystallography (MX). For working with: macromolecular models (content of PDB, PDBx/mmCIF and mmJSON files), refinement restraints (CIF files), reflection data (MTZ and mmCIF formats), data on a 3D grid (electron density maps, masks, MRC/CCP4 format) crystallographic symmetry. Parts of this library can be useful in structural bioinformatics (for symmetry- aware analysis of protein models), and in other molecular-structure sciences that use CIF files (we have the fastest open-source CIF parser). @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.4.5`` | ``GCCcore/10.2.0`` ``0.6.5`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gencore_variant_detection.md b/docs/version-specific/supported-software/g/gencore_variant_detection.md index 47552d4b0..c563a7b08 100644 --- a/docs/version-specific/supported-software/g/gencore_variant_detection.md +++ b/docs/version-specific/supported-software/g/gencore_variant_detection.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gencore_variant_detection This is a bundled install of many software packages for doing variant detection analysis. @@ -7,3 +11,6 @@ This is a bundled install of many software packages for doing variant detection version | toolchain --------|---------- ``1.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gengetopt.md b/docs/version-specific/supported-software/g/gengetopt.md index abee3c725..037613b12 100644 --- a/docs/version-specific/supported-software/g/gengetopt.md +++ b/docs/version-specific/supported-software/g/gengetopt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gengetopt Gengetopt is a tool to write command line option parsing code for C programs. @@ -11,3 +15,6 @@ version | toolchain ``2.23`` | ``GCCcore/11.3.0`` ``2.23`` | ``GCCcore/13.2.0`` ``2.23`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/genomepy.md b/docs/version-specific/supported-software/g/genomepy.md index 1ad3d3cbb..64a8822c8 100644 --- a/docs/version-specific/supported-software/g/genomepy.md +++ b/docs/version-specific/supported-software/g/genomepy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # genomepy genomepy is designed to provide a simple and straightforward way to download and use genomic data @@ -7,3 +11,6 @@ genomepy is designed to provide a simple and straightforward way to download and version | toolchain --------|---------- ``0.15.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/genozip.md b/docs/version-specific/supported-software/g/genozip.md index 08fc89734..455b5d282 100644 --- a/docs/version-specific/supported-software/g/genozip.md +++ b/docs/version-specific/supported-software/g/genozip.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # genozip Genozip is a compressor for genomic files - it compresses FASTQ, SAM/BAM/CRAM, VCF, FASTA and others. @@ -7,3 +11,6 @@ Genozip is a compressor for genomic files - it compresses FASTQ, SAM/BAM/CRAM, V version | toolchain --------|---------- ``13.0.5`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gensim.md b/docs/version-specific/supported-software/g/gensim.md index f9e57df03..2efc21668 100644 --- a/docs/version-specific/supported-software/g/gensim.md +++ b/docs/version-specific/supported-software/g/gensim.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gensim Gensim is a Python library for topic modelling, document indexing and similarity retrieval with large corpora. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``3.8.3`` | | ``foss/2020b`` ``3.8.3`` | | ``intel/2020b`` ``4.2.0`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/geocube.md b/docs/version-specific/supported-software/g/geocube.md index a37ca5e1d..f01f8917c 100644 --- a/docs/version-specific/supported-software/g/geocube.md +++ b/docs/version-specific/supported-software/g/geocube.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # geocube Tool to convert geopandas vector data into rasterized xarray data. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.0.14`` | ``-Python-3.8.2`` | ``foss/2020a`` ``0.4.3`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/geopandas.md b/docs/version-specific/supported-software/g/geopandas.md index e49c2817e..ebea6a8ce 100644 --- a/docs/version-specific/supported-software/g/geopandas.md +++ b/docs/version-specific/supported-software/g/geopandas.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # geopandas GeoPandas is a project to add support for geographic data to pandas objects. It currently implements GeoSeries and GeoDataFrame types which are subclasses of pandas.Series and pandas.DataFrame respectively. GeoPandas objects can act on shapely geometry objects and perform geometric operations. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``0.8.0`` | ``-Python-3.7.2`` | ``foss/2019a`` ``0.8.1`` | ``-Python-3.8.2`` | ``foss/2020a`` ``0.8.1`` | ``-Python-3.7.4`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/geopy.md b/docs/version-specific/supported-software/g/geopy.md index 643e3c477..3de4e2693 100644 --- a/docs/version-specific/supported-software/g/geopy.md +++ b/docs/version-specific/supported-software/g/geopy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # geopy geopy is a Python 2 and 3 client for several popular geocoding web services. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.11.0`` | ``-Python-3.6.1`` | ``intel/2017a`` ``2.1.0`` | | ``GCCcore/10.2.0`` ``2.4.1`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/georges.md b/docs/version-specific/supported-software/g/georges.md index 97b077c4d..18eeaf314 100644 --- a/docs/version-specific/supported-software/g/georges.md +++ b/docs/version-specific/supported-software/g/georges.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # georges Georges the lemur opinionated particle accelerator modeling Python package. Also a thin wrapper over MAD-X/PTC, BDSim and G4Beamline. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2019.2`` | ``-Python-3.7.4`` | ``foss/2019b`` ``2019.2`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/geosphere.md b/docs/version-specific/supported-software/g/geosphere.md index 3debbd68e..1afb69d31 100644 --- a/docs/version-specific/supported-software/g/geosphere.md +++ b/docs/version-specific/supported-software/g/geosphere.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # geosphere Spherical trigonometry for geographic applications. That is, compute distances and related measures for angular (longitude/latitude) locations. @@ -7,3 +11,6 @@ Spherical trigonometry for geographic applications. That is, compute distances version | versionsuffix | toolchain --------|---------------|---------- ``1.5-18`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gettext.md b/docs/version-specific/supported-software/g/gettext.md index aa4606f82..94a6bcfd7 100644 --- a/docs/version-specific/supported-software/g/gettext.md +++ b/docs/version-specific/supported-software/g/gettext.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gettext GNU 'gettext' is an important step for the GNU Translation Project, as it is an asset on which we may build many other steps. This package offers to programmers, translators, and even users, a well integrated set of tools and documentation @@ -44,3 +48,6 @@ version | versionsuffix | toolchain ``0.22.5`` | | ``GCCcore/13.3.0`` ``0.22.5`` | | ``system`` ``0.22`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gexiv2.md b/docs/version-specific/supported-software/g/gexiv2.md index 29f9bc925..44ea59c4d 100644 --- a/docs/version-specific/supported-software/g/gexiv2.md +++ b/docs/version-specific/supported-software/g/gexiv2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gexiv2 gexiv2 is a GObject wrapper around the Exiv2 photo metadata library. @@ -7,3 +11,6 @@ gexiv2 is a GObject wrapper around the Exiv2 photo metadata library. version | toolchain --------|---------- ``0.12.2`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gfbf.md b/docs/version-specific/supported-software/g/gfbf.md index f308095b3..08396c6c7 100644 --- a/docs/version-specific/supported-software/g/gfbf.md +++ b/docs/version-specific/supported-software/g/gfbf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gfbf GNU Compiler Collection (GCC) based compiler toolchain, including FlexiBLAS (BLAS and LAPACK support) and (serial) FFTW. @@ -12,3 +16,6 @@ version | toolchain ``2023a`` | ``system`` ``2023b`` | ``system`` ``2024.05`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gffread.md b/docs/version-specific/supported-software/g/gffread.md index d10cb7920..869340e6a 100644 --- a/docs/version-specific/supported-software/g/gffread.md +++ b/docs/version-specific/supported-software/g/gffread.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gffread GFF/GTF parsing utility providing format conversions, region filtering, FASTA sequence extraction and more. @@ -13,3 +17,6 @@ version | toolchain ``0.12.7`` | ``GCCcore/11.2.0`` ``0.12.7`` | ``GCCcore/12.2.0`` ``0.9.12`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gffutils.md b/docs/version-specific/supported-software/g/gffutils.md index 1780c590c..2f691c65f 100644 --- a/docs/version-specific/supported-software/g/gffutils.md +++ b/docs/version-specific/supported-software/g/gffutils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gffutils Gffutils is a Python package for working with and manipulating the GFF and GTF format files typically used for genomic annotations. @@ -7,3 +11,6 @@ Gffutils is a Python package for working with and manipulating the GFF and GTF version | toolchain --------|---------- ``0.12`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gflags.md b/docs/version-specific/supported-software/g/gflags.md index cb6f5ca28..9795623db 100644 --- a/docs/version-specific/supported-software/g/gflags.md +++ b/docs/version-specific/supported-software/g/gflags.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gflags The gflags package contains a C++ library that implements commandline flags processing. It includes built-in support for standard types such as string and the ability to define flags in the source file in which they are used. @@ -18,3 +22,6 @@ version | toolchain ``2.2.2`` | ``GCCcore/8.2.0`` ``2.2.2`` | ``GCCcore/8.3.0`` ``2.2.2`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gh.md b/docs/version-specific/supported-software/g/gh.md index 6cd3f662d..bbac3b93a 100644 --- a/docs/version-specific/supported-software/g/gh.md +++ b/docs/version-specific/supported-software/g/gh.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gh gh is GitHub on the command line. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.3.1`` | ``system`` ``2.20.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/giac.md b/docs/version-specific/supported-software/g/giac.md index a11369fa9..b261d102f 100644 --- a/docs/version-specific/supported-software/g/giac.md +++ b/docs/version-specific/supported-software/g/giac.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # giac Giac is a C++ library, it is the CAS computing kernel. It may be used inside other C++ programs, and also Python, Java and Javascript programs. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.9.0-69`` | ``gfbf/2022a`` ``1.9.0-99`` | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/giflib.md b/docs/version-specific/supported-software/g/giflib.md index a999f1c0e..403628dee 100644 --- a/docs/version-specific/supported-software/g/giflib.md +++ b/docs/version-specific/supported-software/g/giflib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # giflib giflib is a library for reading and writing gif images. It is API and ABI compatible with libungif which was in wide use while the LZW compression algorithm was patented. @@ -17,3 +21,6 @@ version | toolchain ``5.2.1`` | ``GCCcore/13.2.0`` ``5.2.1`` | ``GCCcore/8.3.0`` ``5.2.1`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gifsicle.md b/docs/version-specific/supported-software/g/gifsicle.md index 0fd5664b4..d44e5cc7f 100644 --- a/docs/version-specific/supported-software/g/gifsicle.md +++ b/docs/version-specific/supported-software/g/gifsicle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gifsicle Gifsicle is a command-line tool for creating, editing, and getting information about GIF images and animations. Making a GIF animation with gifsicle is easy. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.92`` | ``GCCcore/8.2.0`` ``1.93`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gimkl.md b/docs/version-specific/supported-software/g/gimkl.md index c74e7ad3f..873262d38 100644 --- a/docs/version-specific/supported-software/g/gimkl.md +++ b/docs/version-specific/supported-software/g/gimkl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gimkl GNU Compiler Collection (GCC) based compiler toolchain, next to Intel MPI and Intel MKL (BLAS, (Sca)LAPACK, FFTW). @@ -9,3 +13,6 @@ version | toolchain ``2.11.5`` | ``system`` ``2017a`` | ``system`` ``2018b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gimpi.md b/docs/version-specific/supported-software/g/gimpi.md index a5b458f16..875c35364 100644 --- a/docs/version-specific/supported-software/g/gimpi.md +++ b/docs/version-specific/supported-software/g/gimpi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gimpi GNU Compiler Collection (GCC) based compiler toolchain, next to Intel MPI. @@ -11,3 +15,6 @@ version | toolchain ``2017b`` | ``system`` ``2018a`` | ``system`` ``2018b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gimpic.md b/docs/version-specific/supported-software/g/gimpic.md index e0862a5ad..e5050dd05 100644 --- a/docs/version-specific/supported-software/g/gimpic.md +++ b/docs/version-specific/supported-software/g/gimpic.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gimpic GNU Compiler Collection (GCC) based compiler toolchain along with CUDA toolkit, including IntelMPI for MPI support with CUDA features enabled. @@ -7,3 +11,6 @@ GNU Compiler Collection (GCC) based compiler toolchain along with CUDA toolkit, version | toolchain --------|---------- ``2017b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/giolf.md b/docs/version-specific/supported-software/g/giolf.md index 863149a65..367ee1e58 100644 --- a/docs/version-specific/supported-software/g/giolf.md +++ b/docs/version-specific/supported-software/g/giolf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # giolf GNU Compiler Collection (GCC) based compiler toolchain, including IntelMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2017b`` | ``system`` ``2018a`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/giolfc.md b/docs/version-specific/supported-software/g/giolfc.md index 9291b49af..79f378b74 100644 --- a/docs/version-specific/supported-software/g/giolfc.md +++ b/docs/version-specific/supported-software/g/giolfc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # giolfc GCC based compiler toolchain __with CUDA support__, and including IntelMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK. @@ -7,3 +11,6 @@ GCC based compiler toolchain __with CUDA support__, and including IntelMPI for version | toolchain --------|---------- ``2017b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/git-annex.md b/docs/version-specific/supported-software/g/git-annex.md index 784f7a5b8..01de8161e 100644 --- a/docs/version-specific/supported-software/g/git-annex.md +++ b/docs/version-specific/supported-software/g/git-annex.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # git-annex git-annex allows managing large files with git, without storing the file contents in git. It can sync, backup, and archive your data, offline and online. Checksums and encryption keep your data safe and secure. Bring the power and distributed nature of git to bear on your large files with git-annex. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``10.20230802`` | ``GCCcore/12.2.0`` ``10.20230802`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/git-extras.md b/docs/version-specific/supported-software/g/git-extras.md index 7997706fc..4f41a9db5 100644 --- a/docs/version-specific/supported-software/g/git-extras.md +++ b/docs/version-specific/supported-software/g/git-extras.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # git-extras Extra useful scripts for git @@ -7,3 +11,6 @@ Extra useful scripts for git version | toolchain --------|---------- ``5.1.0`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/git-lfs.md b/docs/version-specific/supported-software/g/git-lfs.md index f5b3d2cbb..732cccdcf 100644 --- a/docs/version-specific/supported-software/g/git-lfs.md +++ b/docs/version-specific/supported-software/g/git-lfs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # git-lfs Git Large File Storage (LFS) replaces large files such as audio samples, videos, datasets, and graphics with text pointers inside Git, while storing the file contents on a remote server like GitHub.com or GitHub Enterprise. @@ -13,3 +17,6 @@ version | toolchain ``3.4.0`` | ``system`` ``3.4.1`` | ``system`` ``3.5.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/git.md b/docs/version-specific/supported-software/g/git.md index 57be3a23d..d355dff9d 100644 --- a/docs/version-specific/supported-software/g/git.md +++ b/docs/version-specific/supported-software/g/git.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # git Git is a free and open source distributed version control system designed to handle everything from small to very large projects with speed and efficiency. @@ -29,3 +33,6 @@ version | versionsuffix | toolchain ``2.42.0`` | | ``GCCcore/13.2.0`` ``2.45.1`` | | ``GCCcore/13.3.0`` ``2.8.0`` | | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gkmSVM.md b/docs/version-specific/supported-software/g/gkmSVM.md index 71aea2192..9ade481e3 100644 --- a/docs/version-specific/supported-software/g/gkmSVM.md +++ b/docs/version-specific/supported-software/g/gkmSVM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gkmSVM Gapped-Kmer Support Vector Machine. @@ -7,3 +11,6 @@ Gapped-Kmer Support Vector Machine. version | versionsuffix | toolchain --------|---------------|---------- ``0.82.0`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/glew.md b/docs/version-specific/supported-software/g/glew.md index eace648a9..37bb71f3a 100644 --- a/docs/version-specific/supported-software/g/glew.md +++ b/docs/version-specific/supported-software/g/glew.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # glew The OpenGL Extension Wrangler Library (GLEW) is a cross-platform open-source C/C++ extension loading library. GLEW provides efficient run-time mechanisms for determining which OpenGL extensions are supported on the target platform. @@ -22,3 +26,6 @@ version | versionsuffix | toolchain ``2.2.0`` | ``-osmesa`` | ``GCCcore/11.3.0`` ``2.2.0`` | ``-egl`` | ``GCCcore/12.3.0`` ``2.2.0`` | ``-osmesa`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/glib-networking.md b/docs/version-specific/supported-software/g/glib-networking.md index d93b9aed9..11b521a78 100644 --- a/docs/version-specific/supported-software/g/glib-networking.md +++ b/docs/version-specific/supported-software/g/glib-networking.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # glib-networking Network extensions for GLib @@ -9,3 +13,6 @@ version | toolchain ``2.68.1`` | ``GCCcore/10.3.0`` ``2.72.1`` | ``GCCcore/11.2.0`` ``2.72.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/glibc.md b/docs/version-specific/supported-software/g/glibc.md index f0f4c351f..f872074c2 100644 --- a/docs/version-specific/supported-software/g/glibc.md +++ b/docs/version-specific/supported-software/g/glibc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # glibc The GNU C Library project provides the core libraries for the GNU system and GNU/Linux systems, as well as many other systems that use Linux as the kernel. @@ -9,3 +13,6 @@ version | toolchain ``2.17`` | ``GCCcore/6.4.0`` ``2.26`` | ``GCCcore/6.4.0`` ``2.30`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/glog.md b/docs/version-specific/supported-software/g/glog.md index 9f21ae853..c4e0bb41a 100644 --- a/docs/version-specific/supported-software/g/glog.md +++ b/docs/version-specific/supported-software/g/glog.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # glog A C++ implementation of the Google logging module. @@ -15,3 +19,6 @@ version | toolchain ``0.4.0`` | ``GCCcore/9.3.0`` ``0.5.0`` | ``GCCcore/10.2.0`` ``0.6.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/glproto.md b/docs/version-specific/supported-software/g/glproto.md index 7f8654262..c082aeadc 100644 --- a/docs/version-specific/supported-software/g/glproto.md +++ b/docs/version-specific/supported-software/g/glproto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # glproto X protocol and ancillary headers @@ -9,3 +13,6 @@ version | toolchain ``1.4.17`` | ``foss/2016a`` ``1.4.17`` | ``gimkl/2.11.5`` ``1.4.17`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gmpich.md b/docs/version-specific/supported-software/g/gmpich.md index b28801363..da0afb383 100644 --- a/docs/version-specific/supported-software/g/gmpich.md +++ b/docs/version-specific/supported-software/g/gmpich.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gmpich gcc and GFortran based compiler toolchain, including MPICH for MPI support. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2016a`` | ``system`` ``2017.08`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gmpolf.md b/docs/version-specific/supported-software/g/gmpolf.md index e72a3c97b..cb5fd7c51 100644 --- a/docs/version-specific/supported-software/g/gmpolf.md +++ b/docs/version-specific/supported-software/g/gmpolf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gmpolf gcc and GFortran based compiler toolchain, MPICH for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2016a`` | ``system`` ``2017.10`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gmpy2.md b/docs/version-specific/supported-software/g/gmpy2.md index 88ff9e8ac..ea6f82374 100644 --- a/docs/version-specific/supported-software/g/gmpy2.md +++ b/docs/version-specific/supported-software/g/gmpy2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gmpy2 GMP/MPIR, MPFR, and MPC interface to Python 2.6+ and 3.x @@ -27,3 +31,6 @@ version | versionsuffix | toolchain ``2.1.5`` | | ``GCC/12.2.0`` ``2.1.5`` | | ``GCC/12.3.0`` ``2.1.5`` | | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gmsh.md b/docs/version-specific/supported-software/g/gmsh.md index de1b76c95..9d4b256e4 100644 --- a/docs/version-specific/supported-software/g/gmsh.md +++ b/docs/version-specific/supported-software/g/gmsh.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gmsh Gmsh is a 3D finite element grid generator with a build-in CAD engine and post-processor. @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``4.7.1`` | ``-Python-3.8.2`` | ``intel/2020a`` ``4.8.4`` | ``-Python-3.6.4`` | ``foss/2018a`` ``4.9.0`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gmvapich2.md b/docs/version-specific/supported-software/g/gmvapich2.md index 40f7c54d6..811f0c858 100644 --- a/docs/version-specific/supported-software/g/gmvapich2.md +++ b/docs/version-specific/supported-software/g/gmvapich2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gmvapich2 GNU Compiler Collection (GCC) based compiler toolchain, including MVAPICH2 for MPI support. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.7.20`` | ``system`` ``2016a`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gmvolf.md b/docs/version-specific/supported-software/g/gmvolf.md index 4a20f89e1..3f61e5177 100644 --- a/docs/version-specific/supported-software/g/gmvolf.md +++ b/docs/version-specific/supported-software/g/gmvolf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gmvolf GNU Compiler Collection (GCC) based compiler toolchain, including MVAPICH2 for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.7.20`` | ``system`` ``2016a`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gnupg-bundle.md b/docs/version-specific/supported-software/g/gnupg-bundle.md index 531759384..18fc3fc56 100644 --- a/docs/version-specific/supported-software/g/gnupg-bundle.md +++ b/docs/version-specific/supported-software/g/gnupg-bundle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gnupg-bundle GnuPG — The Universal Crypto Engine @@ -7,3 +11,6 @@ GnuPG — The Universal Crypto Engine version | toolchain --------|---------- ``20240306`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gnuplot.md b/docs/version-specific/supported-software/g/gnuplot.md index dfb9f83d8..66f4ae9a1 100644 --- a/docs/version-specific/supported-software/g/gnuplot.md +++ b/docs/version-specific/supported-software/g/gnuplot.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gnuplot Portable interactive, function plotting utility @@ -27,3 +31,6 @@ version | toolchain ``5.4.4`` | ``GCCcore/11.3.0`` ``5.4.6`` | ``GCCcore/12.2.0`` ``5.4.8`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/goalign.md b/docs/version-specific/supported-software/g/goalign.md index 6bc9578fb..6d38cb806 100644 --- a/docs/version-specific/supported-software/g/goalign.md +++ b/docs/version-specific/supported-software/g/goalign.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # goalign Goalign is a set of command line tools to manipulate multiple alignments. @@ -7,3 +11,6 @@ Goalign is a set of command line tools to manipulate multiple alignments. version | toolchain --------|---------- ``0.3.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gobff.md b/docs/version-specific/supported-software/g/gobff.md index cfd229264..958500818 100644 --- a/docs/version-specific/supported-software/g/gobff.md +++ b/docs/version-specific/supported-software/g/gobff.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gobff GCC and GFortran based compiler toolchain with OpenMPI, BLIS, libFLAME, ScaLAPACK and FFTW. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2020.11`` | | ``system`` ``2020b`` | | ``system`` ``2021a`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/goblf.md b/docs/version-specific/supported-software/g/goblf.md index 5bb89a216..d98f943f2 100644 --- a/docs/version-specific/supported-software/g/goblf.md +++ b/docs/version-specific/supported-software/g/goblf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # goblf GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support, BLIS (BLAS support), LAPACK, FFTW and ScaLAPACK. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2018b`` | ``system`` ``2020b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gofasta.md b/docs/version-specific/supported-software/g/gofasta.md index 3d2cd700e..a2779a83a 100644 --- a/docs/version-specific/supported-software/g/gofasta.md +++ b/docs/version-specific/supported-software/g/gofasta.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gofasta Some functions for dealing with alignments, developed to handle SARS-CoV-2 data as part of the COG-UK project. @@ -7,3 +11,6 @@ Some functions for dealing with alignments, developed to handle SARS-CoV-2 data version | toolchain --------|---------- ``0.0.5`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/golf.md b/docs/version-specific/supported-software/g/golf.md index c97fbf051..9d7b2a85f 100644 --- a/docs/version-specific/supported-software/g/golf.md +++ b/docs/version-specific/supported-software/g/golf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # golf GNU Compiler Collection (GCC) based compiler toolchain, including OpenBLAS (BLAS and LAPACK support) and FFTW. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2018a`` | ``system`` ``2020a`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gomkl.md b/docs/version-specific/supported-software/g/gomkl.md index 8fe50c607..72cd079ee 100644 --- a/docs/version-specific/supported-software/g/gomkl.md +++ b/docs/version-specific/supported-software/g/gomkl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gomkl GNU Compiler Collection (GCC) based compiler toolchain with OpenMPI and MKL @@ -14,3 +18,6 @@ version | toolchain ``2021b`` | ``system`` ``2022a`` | ``system`` ``2023a`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gompi.md b/docs/version-specific/supported-software/g/gompi.md index 4c49fb6aa..f82db771a 100644 --- a/docs/version-specific/supported-software/g/gompi.md +++ b/docs/version-specific/supported-software/g/gompi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gompi GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support. @@ -32,3 +36,6 @@ version | versionsuffix | toolchain ``2023b`` | | ``system`` ``2024.05`` | | ``system`` ``system`` | ``-2.29`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gompic.md b/docs/version-specific/supported-software/g/gompic.md index 970cf785b..76b0e71a1 100644 --- a/docs/version-specific/supported-software/g/gompic.md +++ b/docs/version-specific/supported-software/g/gompic.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gompic GNU Compiler Collection (GCC) based compiler toolchain along with CUDA toolkit, including OpenMPI for MPI support with CUDA features enabled. @@ -13,3 +17,6 @@ version | toolchain ``2019b`` | ``system`` ``2020a`` | ``system`` ``2020b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/google-java-format.md b/docs/version-specific/supported-software/g/google-java-format.md index 04a54cb75..2b38b1465 100644 --- a/docs/version-specific/supported-software/g/google-java-format.md +++ b/docs/version-specific/supported-software/g/google-java-format.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # google-java-format Reformats Java source code to comply with Google Java Style. @@ -7,3 +11,6 @@ Reformats Java source code to comply with Google Java Style. version | versionsuffix | toolchain --------|---------------|---------- ``1.7`` | ``-Java-1.8`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/googletest.md b/docs/version-specific/supported-software/g/googletest.md index bc428be5b..10d2f274e 100644 --- a/docs/version-specific/supported-software/g/googletest.md +++ b/docs/version-specific/supported-software/g/googletest.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # googletest Google's framework for writing C++ tests on a variety of platforms @@ -20,3 +24,6 @@ version | toolchain ``1.8.0`` | ``foss/2016b`` ``1.8.0`` | ``intel/2016b`` ``1.8.1`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gotree.md b/docs/version-specific/supported-software/g/gotree.md index 4273262bf..5af5824eb 100644 --- a/docs/version-specific/supported-software/g/gotree.md +++ b/docs/version-specific/supported-software/g/gotree.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gotree GoTree is a set of command line tools to manipulate phylogenetic trees. @@ -7,3 +11,6 @@ GoTree is a set of command line tools to manipulate phylogenetic trees. version | toolchain --------|---------- ``0.4.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gperf.md b/docs/version-specific/supported-software/g/gperf.md index c752869d4..a28536fc7 100644 --- a/docs/version-specific/supported-software/g/gperf.md +++ b/docs/version-specific/supported-software/g/gperf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gperf GNU gperf is a perfect hash function generator. For a given list of strings, it produces a hash function and hash table, in form of C or C++ code, for looking up a value depending on the input string. The hash function is perfect, which means that the hash table has no collisions, and the hash table lookup needs a single string comparison only. @@ -26,3 +30,6 @@ version | toolchain ``3.1`` | ``GCCcore/8.2.0`` ``3.1`` | ``GCCcore/8.3.0`` ``3.1`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gperftools.md b/docs/version-specific/supported-software/g/gperftools.md index b5b5301bf..7eae4fbbc 100644 --- a/docs/version-specific/supported-software/g/gperftools.md +++ b/docs/version-specific/supported-software/g/gperftools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gperftools gperftools is a collection of a high-performance multi-threaded malloc() implementation, plus some pretty nifty performance analysis tools. Includes TCMalloc, heap-checker, heap-profiler and cpu-profiler. @@ -19,3 +23,6 @@ version | toolchain ``2.9.1`` | ``GCCcore/10.2.0`` ``2.9.1`` | ``GCCcore/10.3.0`` ``2.9.1`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gpustat.md b/docs/version-specific/supported-software/g/gpustat.md index cb45fae93..8d66ce481 100644 --- a/docs/version-specific/supported-software/g/gpustat.md +++ b/docs/version-specific/supported-software/g/gpustat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gpustat dstat-like utilization monitor for NVIDIA GPUs @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``0.6.0`` | | ``gcccuda/2020b`` ``1.0.0b1`` | | ``GCCcore/11.2.0`` ``1.1`` | | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gradunwarp.md b/docs/version-specific/supported-software/g/gradunwarp.md index c74a3404a..c8e4a78a6 100644 --- a/docs/version-specific/supported-software/g/gradunwarp.md +++ b/docs/version-specific/supported-software/g/gradunwarp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gradunwarp Gradient Unwarping. This is the Human Connectome Project fork of the no longer maintained original. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.1.0`` | ``-HCP-Python-2.7.15`` | ``foss/2019a`` ``1.2.0`` | ``-HCP-Python-2.7.15`` | ``foss/2019a`` ``1.2.0`` | ``-HCP-Python-3.7.2`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/graph-tool.md b/docs/version-specific/supported-software/g/graph-tool.md index a94d745a4..06765b555 100644 --- a/docs/version-specific/supported-software/g/graph-tool.md +++ b/docs/version-specific/supported-software/g/graph-tool.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # graph-tool Graph-tool is an efficient Python module for manipulation and statistical analysis of graphs (a.k.a. networks). Contrary to most other python modules with similar functionality, the core data structures and algorithms are implemented in C++, making extensive use of template metaprogramming, based heavily on the Boost Graph Library. This confers it a level of performance that is comparable (both in memory usage and computation time) to that of a pure C/C++ library. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.26`` | ``-Python-3.6.3`` | ``foss/2017b`` ``2.27`` | ``-Python-3.6.6`` | ``foss/2018b`` ``2.55`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/graphite2.md b/docs/version-specific/supported-software/g/graphite2.md index 612f32aad..db95bd66d 100644 --- a/docs/version-specific/supported-software/g/graphite2.md +++ b/docs/version-specific/supported-software/g/graphite2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # graphite2 Graphite is a "smart font" system developed specifically to handle the complexities of lesser-known languages of the world. @@ -14,3 +18,6 @@ version | toolchain ``1.3.14`` | ``GCCcore/12.3.0`` ``1.3.14`` | ``GCCcore/13.2.0`` ``1.3.14`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/graphviz-python.md b/docs/version-specific/supported-software/g/graphviz-python.md index 181960ccc..17ae75bef 100644 --- a/docs/version-specific/supported-software/g/graphviz-python.md +++ b/docs/version-specific/supported-software/g/graphviz-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # graphviz-python Simple Python interface for Graphviz @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``0.5.1`` | ``-Python-2.7.12`` | ``intel/2016b`` ``0.5.1`` | ``-Python-3.5.2`` | ``intel/2016b`` ``0.8.2`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gretl.md b/docs/version-specific/supported-software/g/gretl.md index 92232cf74..e44f5f82c 100644 --- a/docs/version-specific/supported-software/g/gretl.md +++ b/docs/version-specific/supported-software/g/gretl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gretl A cross-platform software package for econometric analysis @@ -7,3 +11,6 @@ A cross-platform software package for econometric analysis version | toolchain --------|---------- ``2020a`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/grib_api.md b/docs/version-specific/supported-software/g/grib_api.md index 8bf3d5db5..4b6ebe62d 100644 --- a/docs/version-specific/supported-software/g/grib_api.md +++ b/docs/version-specific/supported-software/g/grib_api.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # grib_api The ECMWF GRIB API is an application program interface accessible from C, FORTRAN and Python programs developed for encoding and decoding WMO FM-92 GRIB edition 1 and edition 2 messages. A useful set of command line tools is also provided to give quick access to GRIB messages. @@ -11,3 +15,6 @@ version | toolchain ``1.24.0`` | ``foss/2017b`` ``1.24.0`` | ``intel/2017a`` ``1.24.0`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/grid.md b/docs/version-specific/supported-software/g/grid.md index 440aa2152..a0baec5ec 100644 --- a/docs/version-specific/supported-software/g/grid.md +++ b/docs/version-specific/supported-software/g/grid.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # grid Grid is a free and open-source Python library for numerical integration, interpolation and differentiation of interest for the quantum chemistry community. @@ -7,3 +11,6 @@ Grid is a free and open-source Python library for numerical integration, interp version | toolchain --------|---------- ``20220610`` | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/groff.md b/docs/version-specific/supported-software/g/groff.md index b0b6c3b87..5294413f9 100644 --- a/docs/version-specific/supported-software/g/groff.md +++ b/docs/version-specific/supported-software/g/groff.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # groff Groff (GNU troff) is a typesetting system that reads plain text mixed with formatting commands and produces formatted output. @@ -17,3 +21,6 @@ version | toolchain ``1.22.4`` | ``GCCcore/8.3.0`` ``1.22.4`` | ``GCCcore/9.3.0`` ``1.23.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/grpcio.md b/docs/version-specific/supported-software/g/grpcio.md index fa1950341..81fb5550f 100644 --- a/docs/version-specific/supported-software/g/grpcio.md +++ b/docs/version-specific/supported-software/g/grpcio.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # grpcio gRPC is a modern, open source, high-performance remote procedure call (RPC) framework that can run anywhere. gRPC enables client and server applications to communicate transparently, and simplifies the building of connected systems. @@ -7,3 +11,6 @@ gRPC is a modern, open source, high-performance remote procedure call (RPC) fram version | toolchain --------|---------- ``1.57.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gsettings-desktop-schemas.md b/docs/version-specific/supported-software/g/gsettings-desktop-schemas.md index 64769353e..b0544b0cf 100644 --- a/docs/version-specific/supported-software/g/gsettings-desktop-schemas.md +++ b/docs/version-specific/supported-software/g/gsettings-desktop-schemas.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gsettings-desktop-schemas gsettings-desktop-schemas contains a collection of GSettings schemas for settings shared by various components of a desktop. @@ -7,3 +11,6 @@ gsettings-desktop-schemas contains a collection of GSettings schemas for settin version | toolchain --------|---------- ``3.34.0`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gspell.md b/docs/version-specific/supported-software/g/gspell.md index f457fc72f..827eda665 100644 --- a/docs/version-specific/supported-software/g/gspell.md +++ b/docs/version-specific/supported-software/g/gspell.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gspell gspell provides a flexible API to add spell-checking to a GTK application. @@ -7,3 +11,6 @@ gspell provides a flexible API to add spell-checking to a GTK application. version | toolchain --------|---------- ``1.12.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gsport.md b/docs/version-specific/supported-software/g/gsport.md index 66757db01..d73e75efc 100644 --- a/docs/version-specific/supported-software/g/gsport.md +++ b/docs/version-specific/supported-software/g/gsport.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gsport GSPORT command-line tool for accessing GenomeScan Customer Portal @@ -7,3 +11,6 @@ GSPORT command-line tool for accessing GenomeScan Customer Portal version | versionsuffix | toolchain --------|---------------|---------- ``1.4.2`` | ``-Python-3.7.4`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gsutil.md b/docs/version-specific/supported-software/g/gsutil.md index 93ed03c57..32ddfada4 100644 --- a/docs/version-specific/supported-software/g/gsutil.md +++ b/docs/version-specific/supported-software/g/gsutil.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gsutil gsutil is a Python application that lets you access Cloud Storage from the command line. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``5.10`` | ``GCCcore/11.2.0`` ``5.29`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gsw.md b/docs/version-specific/supported-software/g/gsw.md index 44b4c91ab..e5ad4935b 100644 --- a/docs/version-specific/supported-software/g/gsw.md +++ b/docs/version-specific/supported-software/g/gsw.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gsw This Python implementation of the Thermodynamic Equation of Seawater 2010 (TEOS-10) is based primarily on numpy ufunc wrappers of the GSW-C implementation. This library replaces the original python-gsw pure-python implementation.. The primary reasons for this change are that by building on the C implementation we reduce code duplication and we gain an immediate update to the 75-term equation. Additional benefits include a major increase in speed, a reduction in memory usage, and the inclusion of more functions. The penalty is that a C (or MSVC C++ for Windows) compiler is required to build the package from source. @@ -7,3 +11,6 @@ This Python implementation of the Thermodynamic Equation of Seawater 2010 (TEOS version | toolchain --------|---------- ``3.6.16`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gubbins.md b/docs/version-specific/supported-software/g/gubbins.md index c7fe1c7b8..54c490441 100644 --- a/docs/version-specific/supported-software/g/gubbins.md +++ b/docs/version-specific/supported-software/g/gubbins.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gubbins Gubbins (Genealogies Unbiased By recomBinations In Nucleotide Sequences) is an algorithm that iteratively identifies loci containing elevated densities of base substitutions while concurrently constructing a phylogeny based on the putative point mutations outside of these regions. Simulations demonstrate the algorithm generates highly accurate reconstructions under realistic models of short-term bacterial evolution, and can be run in only a few hours on alignments of hundreds of bacterial genome sequences. @@ -7,3 +11,6 @@ Gubbins (Genealogies Unbiased By recomBinations In Nucleotide Sequences) is an a version | toolchain --------|---------- ``2.4.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/guenomu.md b/docs/version-specific/supported-software/g/guenomu.md index e5c085f4a..6d7c780bd 100644 --- a/docs/version-specific/supported-software/g/guenomu.md +++ b/docs/version-specific/supported-software/g/guenomu.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # guenomu guenomu is a software written in C that estimates the species tree for a given set of gene families. @@ -7,3 +11,6 @@ guenomu is a software written in C that estimates the species tree for a given s version | versionsuffix | toolchain --------|---------------|---------- ``2019.07.05`` | ``-mpi`` | ``iimpi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/gzip.md b/docs/version-specific/supported-software/g/gzip.md index 549a4e76f..d67aa5b2e 100644 --- a/docs/version-specific/supported-software/g/gzip.md +++ b/docs/version-specific/supported-software/g/gzip.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # gzip gzip (GNU zip) is a popular data compression program as a replacement for compress @@ -21,3 +25,6 @@ version | toolchain ``1.8`` | ``GCCcore/6.3.0`` ``1.8`` | ``GCCcore/6.4.0`` ``1.9`` | ``GCCcore/7.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/g/index.md b/docs/version-specific/supported-software/g/index.md index ff2feaec5..2eca06294 100644 --- a/docs/version-specific/supported-software/g/index.md +++ b/docs/version-specific/supported-software/g/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (g) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - *g* - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [G-PhoCS](G-PhoCS.md) * [g2clib](g2clib.md) * [g2lib](g2lib.md) diff --git a/docs/version-specific/supported-software/h/H5hut.md b/docs/version-specific/supported-software/h/H5hut.md index 74b9e5036..32a94bda5 100644 --- a/docs/version-specific/supported-software/h/H5hut.md +++ b/docs/version-specific/supported-software/h/H5hut.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # H5hut HDF5 Utility Toolkit: High-Performance I/O Library for Particle-based Simulations @@ -7,3 +11,6 @@ HDF5 Utility Toolkit: High-Performance I/O Library for Particle-based Simulation version | toolchain --------|---------- ``1.99.13`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HAL.md b/docs/version-specific/supported-software/h/HAL.md index 4714815a6..d1fcd71ef 100644 --- a/docs/version-specific/supported-software/h/HAL.md +++ b/docs/version-specific/supported-software/h/HAL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HAL HAL is a structure to efficiently store and index multiple genome alignments and ancestral reconstructions. HAL is a graph-based representation which provides several advantages over matrix/block-based formats such as MAF, such as improved scalability and the ability to perform queries with respect to an arbitrary reference or subtree. This package includes the HAL API and several analysis and conversion tools which are described below. HAL files are presently stored in either HDF5 or mmap format, but we note that the tools and most of the API are format-independent, so other databases could be implemented in the future. @@ -7,3 +11,6 @@ HAL is a structure to efficiently store and index multiple genome alignments and version | toolchain --------|---------- ``2.1`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HAPGEN2.md b/docs/version-specific/supported-software/h/HAPGEN2.md index 32d3f8c93..7a92cf311 100644 --- a/docs/version-specific/supported-software/h/HAPGEN2.md +++ b/docs/version-specific/supported-software/h/HAPGEN2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HAPGEN2 'HAPGEN2' simulates case control datasets at SNP markers. @@ -7,3 +11,6 @@ version | toolchain --------|---------- ``2.2.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HBase.md b/docs/version-specific/supported-software/h/HBase.md index b38faf43b..a5eef4343 100644 --- a/docs/version-specific/supported-software/h/HBase.md +++ b/docs/version-specific/supported-software/h/HBase.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HBase Apache HBase. is the Hadoop database, a distributed, scalable, big data store. @@ -7,3 +11,6 @@ Apache HBase. is the Hadoop database, a distributed, scalable, big data store. version | toolchain --------|---------- ``1.0.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HD-BET.md b/docs/version-specific/supported-software/h/HD-BET.md index 43ac486e0..430816b7d 100644 --- a/docs/version-specific/supported-software/h/HD-BET.md +++ b/docs/version-specific/supported-software/h/HD-BET.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HD-BET Tool for brain extraction. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``20220318`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``20220318`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HDBSCAN.md b/docs/version-specific/supported-software/h/HDBSCAN.md index 34195132b..7a067e2c8 100644 --- a/docs/version-specific/supported-software/h/HDBSCAN.md +++ b/docs/version-specific/supported-software/h/HDBSCAN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HDBSCAN The hdbscan library is a suite of tools to use unsupervised learning to find clusters, or dense regions, of a dataset. The primary algorithm is HDBSCAN* as proposed by Campello, Moulavi, and Sander. The library provides a high performance implementation of this algorithm, along with tools for analysing the resulting clustering. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.8.24`` | ``-Python-3.7.4`` | ``foss/2019b`` ``0.8.27`` | | ``foss/2021a`` ``0.8.29`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HDDM.md b/docs/version-specific/supported-software/h/HDDM.md index a358f09dd..06f1039d7 100644 --- a/docs/version-specific/supported-software/h/HDDM.md +++ b/docs/version-specific/supported-software/h/HDDM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HDDM HDDM is a Puthon toolbox for hierarchical Bayesian parameter estimation of the Drift Diffusion Model (via PyMC). @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.7.5`` | ``-Python-3.7.4`` | ``intel/2019b`` ``0.9.9`` | | ``foss/2021b`` ``0.9.9`` | | ``intel/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HDF-EOS.md b/docs/version-specific/supported-software/h/HDF-EOS.md index 6f2837f4b..a7f43c66c 100644 --- a/docs/version-specific/supported-software/h/HDF-EOS.md +++ b/docs/version-specific/supported-software/h/HDF-EOS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HDF-EOS HDF-EOS libraries are software libraries built on HDF libraries. It supports three data structures for remote sensing data: Grid, Point and Swath. @@ -9,3 +13,6 @@ version | toolchain ``2.20`` | ``GCCcore/10.2.0`` ``2.20`` | ``GCCcore/7.3.0`` ``2.20`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HDF-EOS2.md b/docs/version-specific/supported-software/h/HDF-EOS2.md index 905b01dcd..9464bb5aa 100644 --- a/docs/version-specific/supported-software/h/HDF-EOS2.md +++ b/docs/version-specific/supported-software/h/HDF-EOS2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HDF-EOS2 HDF-EOS libraries are software libraries built on HDF libraries. It supports three data structures for remote sensing data: Grid, Point and Swath. @@ -7,3 +11,6 @@ HDF-EOS libraries are software libraries built on HDF libraries. It supports th version | toolchain --------|---------- ``3.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HDF-EOS5.md b/docs/version-specific/supported-software/h/HDF-EOS5.md index cd7c49b71..49f925c07 100644 --- a/docs/version-specific/supported-software/h/HDF-EOS5.md +++ b/docs/version-specific/supported-software/h/HDF-EOS5.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HDF-EOS5 HDF-EOS libraries are software libraries built on HDF libraries. It supports three data structures for remote sensing data: Grid, Point and Swath. @@ -9,3 +13,6 @@ version | toolchain ``1.16`` | ``foss/2018b`` ``1.16`` | ``gompi/2019b`` ``1.16`` | ``gompi/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HDF.md b/docs/version-specific/supported-software/h/HDF.md index ba380d5e1..434b99693 100644 --- a/docs/version-specific/supported-software/h/HDF.md +++ b/docs/version-specific/supported-software/h/HDF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HDF HDF (also known as HDF4) is a library and multi-object file format for storing and managing data between machines. @@ -23,3 +27,6 @@ version | versionsuffix | toolchain ``4.2.16-2`` | | ``GCCcore/12.3.0`` ``4.2.16-2`` | | ``GCCcore/13.2.0`` ``4.2.16`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HDF5.md b/docs/version-specific/supported-software/h/HDF5.md index 871116622..22f9d6e44 100644 --- a/docs/version-specific/supported-software/h/HDF5.md +++ b/docs/version-specific/supported-software/h/HDF5.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HDF5 HDF5 is a data model, library, and file format for storing and managing data. It supports an unlimited variety of datatypes, and is designed for flexible and efficient I/O and for high volume and complex data. @@ -105,3 +109,6 @@ version | versionsuffix | toolchain ``1.8.20`` | | ``gmpolf/2017.10`` ``1.8.20`` | | ``intel/2017b`` ``1.8.20`` | | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HDFView.md b/docs/version-specific/supported-software/h/HDFView.md index c137a9b1d..652c8fb5a 100644 --- a/docs/version-specific/supported-software/h/HDFView.md +++ b/docs/version-specific/supported-software/h/HDFView.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HDFView HDFView is a visual tool for browsing and editing HDF4 and HDF5 files. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.14`` | ``-Java-1.8.0_152-centos6`` | ``system`` ``2.14`` | ``-Java-1.8.0_152-centos7`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HEALPix.md b/docs/version-specific/supported-software/h/HEALPix.md index 4662659d8..11b29aaa0 100644 --- a/docs/version-specific/supported-software/h/HEALPix.md +++ b/docs/version-specific/supported-software/h/HEALPix.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HEALPix Hierarchical Equal Area isoLatitude Pixelation of a sphere. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.50`` | ``GCCcore/7.3.0`` ``3.50`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HF-Datasets.md b/docs/version-specific/supported-software/h/HF-Datasets.md index 18f47e82b..276d278f1 100644 --- a/docs/version-specific/supported-software/h/HF-Datasets.md +++ b/docs/version-specific/supported-software/h/HF-Datasets.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HF-Datasets The largest hub of ready-to-use datasets for ML models with fast, easy-to-use and efficient data manipulation tools. @@ -7,3 +11,6 @@ The largest hub of ready-to-use datasets for ML models with fast, easy-to-use an version | toolchain --------|---------- ``2.18.0`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HH-suite.md b/docs/version-specific/supported-software/h/HH-suite.md index 4a97d56f7..e48461555 100644 --- a/docs/version-specific/supported-software/h/HH-suite.md +++ b/docs/version-specific/supported-software/h/HH-suite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HH-suite The HH-suite is an open-source software package for sensitive protein sequence searching based on the pairwise alignment of hidden Markov models (HMMs). @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``3.3.0`` | | ``gompi/2023a`` ``3.3.0`` | ``-Python-3.7.4`` | ``gompic/2019b`` ``3.3.0`` | | ``gompic/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HIP.md b/docs/version-specific/supported-software/h/HIP.md index 1f65228d2..594624ada 100644 --- a/docs/version-specific/supported-software/h/HIP.md +++ b/docs/version-specific/supported-software/h/HIP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HIP HIP is a C++ Runtime API and Kernel Language that allows developers to create portable applications for AMD and NVIDIA GPUs from single source code. @@ -7,3 +11,6 @@ HIP is a C++ Runtime API and Kernel Language that allows developers to create po version | versionsuffix | toolchain --------|---------------|---------- ``4.5.0`` | ``-amd`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HIPS.md b/docs/version-specific/supported-software/h/HIPS.md index 0f79b3589..333dffef1 100644 --- a/docs/version-specific/supported-software/h/HIPS.md +++ b/docs/version-specific/supported-software/h/HIPS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HIPS HIPS (Hierarchical Iterative Parallel Solver) is a scientific library that provides an efficient parallel iterative solver for very large sparse linear systems. @@ -7,3 +11,6 @@ HIPS (Hierarchical Iterative Parallel Solver) is a scientific library that provi version | toolchain --------|---------- ``1.2b-rc5`` | ``foss/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HISAT2.md b/docs/version-specific/supported-software/h/HISAT2.md index 3171f95ee..874a870be 100644 --- a/docs/version-specific/supported-software/h/HISAT2.md +++ b/docs/version-specific/supported-software/h/HISAT2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HISAT2 HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (both DNA and RNA) against the general human population (as well as against a single reference genome). @@ -22,3 +26,6 @@ version | toolchain ``2.2.1`` | ``gompi/2021b`` ``2.2.1`` | ``gompi/2022a`` ``2.2.1`` | ``gompi/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HLAminer.md b/docs/version-specific/supported-software/h/HLAminer.md index 10f154f90..132280602 100644 --- a/docs/version-specific/supported-software/h/HLAminer.md +++ b/docs/version-specific/supported-software/h/HLAminer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HLAminer HLAminer is a software for HLA predictions from next-generation shotgun (NGS) sequence read data and supports direct read alignment and targeted de novo assembly of sequence reads. @@ -7,3 +11,6 @@ HLAminer is a software for HLA predictions from next-generation shotgun (NGS) se version | versionsuffix | toolchain --------|---------------|---------- ``1.4`` | ``-Perl-5.28.0`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HMMER.md b/docs/version-specific/supported-software/h/HMMER.md index 683eefefd..0722f4d63 100644 --- a/docs/version-specific/supported-software/h/HMMER.md +++ b/docs/version-specific/supported-software/h/HMMER.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HMMER HMMER is used for searching sequence databases for homologs of protein sequences, and for making protein sequence alignments. It implements methods using probabilistic models called profile hidden Markov models (profile HMMs). Compared to BLAST, FASTA, and other sequence alignment and database search tools based on older scoring methodology, HMMER aims to be significantly more accurate and more able to detect remote homologs because of the strength of its underlying mathematical models. In the past, this strength came at significant computational expense, but in the new HMMER3 project, HMMER is now essentially as fast as BLAST. @@ -32,3 +36,6 @@ version | toolchain ``3.3.2`` | ``iimpi/2020b`` ``3.3.2`` | ``iimpi/2021b`` ``3.4`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HMMER2.md b/docs/version-specific/supported-software/h/HMMER2.md index 200578d1d..b9893f3cf 100644 --- a/docs/version-specific/supported-software/h/HMMER2.md +++ b/docs/version-specific/supported-software/h/HMMER2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HMMER2 HMMER is used for searching sequence databases for sequence homologs, and for making sequence alignments. @@ -9,3 +13,6 @@ version | toolchain ``2.3.2`` | ``GCC/10.2.0`` ``2.3.2`` | ``GCC/10.3.0`` ``2.3.2`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HOME.md b/docs/version-specific/supported-software/h/HOME.md index 6211acc53..0dea264eb 100644 --- a/docs/version-specific/supported-software/h/HOME.md +++ b/docs/version-specific/supported-software/h/HOME.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HOME HOME (histogram of methylation) is a python package for differential methylation region (DMR) identification. The method uses histogram of methylation features and the linear Support Vector Machine (SVM) to identify DMRs from whole genome bisulfite sequencing (WGBS) data. @@ -7,3 +11,6 @@ HOME (histogram of methylation) is a python package for differential methylation version | versionsuffix | toolchain --------|---------------|---------- ``0.9`` | ``-Python-2.7.13`` | ``foss/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HOMER.md b/docs/version-specific/supported-software/h/HOMER.md index 000945a55..baccee3d4 100644 --- a/docs/version-specific/supported-software/h/HOMER.md +++ b/docs/version-specific/supported-software/h/HOMER.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HOMER HOMER (Hypergeometric Optimization of Motif EnRichment) is a suite of tools for Motif Discovery and next-gen sequencing analysis. It is a collection of command line programs for unix-style operating systems written in Perl and C++. HOMER was primarily written as a de novo motif discovery algorithm and is well suited for finding 8-20 bp motifs in large scale genomics data. HOMER contains many useful tools for analyzing ChIP-Seq, GRO-Seq, RNA-Seq, DNase-Seq, Hi-C and numerous other types of functional genomics sequencing data sets. @@ -7,3 +11,6 @@ HOMER (Hypergeometric Optimization of Motif EnRichment) is a suite of tools for version | versionsuffix | toolchain --------|---------------|---------- ``4.11`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HOOMD-blue.md b/docs/version-specific/supported-software/h/HOOMD-blue.md index 7fcc89881..ffc0dddc1 100644 --- a/docs/version-specific/supported-software/h/HOOMD-blue.md +++ b/docs/version-specific/supported-software/h/HOOMD-blue.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HOOMD-blue HOOMD-blue is a general-purpose particle simulation toolkit, implementing molecular dynamics and hard particle Monte Carlo optimized for fast execution on both GPUs and CPUs. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``4.0.1`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``4.0.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HPCC.md b/docs/version-specific/supported-software/h/HPCC.md index 480ec4492..ded004379 100644 --- a/docs/version-specific/supported-software/h/HPCC.md +++ b/docs/version-specific/supported-software/h/HPCC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HPCC HPC Challenge is a benchmark suite that measures a range memory access patterns. The HPC Challenge benchmark consists of basically 7 tests: HPL, DGEMM, STREAM, PTRANS, RandomAccess, FFT, Communication bandwidth and latency @@ -7,3 +11,6 @@ HPC Challenge is a benchmark suite that measures a range memory access patterns. version | toolchain --------|---------- ``1.5.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HPCG.md b/docs/version-specific/supported-software/h/HPCG.md index fadf7fc86..35531da6f 100644 --- a/docs/version-specific/supported-software/h/HPCG.md +++ b/docs/version-specific/supported-software/h/HPCG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HPCG The HPCG Benchmark project is an effort to create a more relevant metric for ranking HPC systems than the High Performance LINPACK (HPL) benchmark, that is currently used by the TOP500 benchmark. @@ -21,3 +25,6 @@ version | toolchain ``3.1`` | ``intel/2022a`` ``3.1`` | ``intel/2022b`` ``3.1`` | ``intel/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HPCX.md b/docs/version-specific/supported-software/h/HPCX.md index a2517d587..8c0a71ee5 100644 --- a/docs/version-specific/supported-software/h/HPCX.md +++ b/docs/version-specific/supported-software/h/HPCX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HPCX The Mellanox HPC-X Toolkit is a comprehensive MPI and SHMEM/PGAS software suite for high performance computing environments @@ -7,3 +11,6 @@ The Mellanox HPC-X Toolkit is a comprehensive MPI and SHMEM/PGAS software suite version | toolchain --------|---------- ``2.3.0`` | ``GCC/8.2.0-2.31.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HPDBSCAN.md b/docs/version-specific/supported-software/h/HPDBSCAN.md index 727790e6f..8f98d05c1 100644 --- a/docs/version-specific/supported-software/h/HPDBSCAN.md +++ b/docs/version-specific/supported-software/h/HPDBSCAN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HPDBSCAN Highly parallel density based spatial clustering for application with noise @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20171110`` | ``foss/2017b`` ``20210826`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HPL.md b/docs/version-specific/supported-software/h/HPL.md index 6d4570682..2082fb04f 100644 --- a/docs/version-specific/supported-software/h/HPL.md +++ b/docs/version-specific/supported-software/h/HPL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HPL HPL is a software package that solves a (random) dense linear system in double precision (64 bits) arithmetic on distributed-memory computers. It can thus be regarded as a portable as well as freely available implementation of the High Performance Computing Linpack Benchmark. @@ -126,3 +130,6 @@ version | versionsuffix | toolchain ``2.3`` | | ``iomkl/2019.01`` ``2.3`` | | ``iomkl/2021a`` ``2.3`` | | ``iomkl/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HTSeq.md b/docs/version-specific/supported-software/h/HTSeq.md index 2ee687b56..3eb7446df 100644 --- a/docs/version-specific/supported-software/h/HTSeq.md +++ b/docs/version-specific/supported-software/h/HTSeq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HTSeq A framework to process and analyze data from high-throughput sequencing (HTS) assays @@ -25,3 +29,6 @@ version | versionsuffix | toolchain ``0.9.1`` | ``-Python-3.6.3`` | ``intel/2017b`` ``0.9.1`` | ``-Python-2.7.14`` | ``intel/2018a`` ``2.0.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HTSlib.md b/docs/version-specific/supported-software/h/HTSlib.md index 8e5b569fa..9d52b8613 100644 --- a/docs/version-specific/supported-software/h/HTSlib.md +++ b/docs/version-specific/supported-software/h/HTSlib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HTSlib A C library for reading/writing high-throughput sequencing data. This package includes the utilities bgzip and tabix @@ -44,3 +48,6 @@ version | versionsuffix | toolchain ``1.9`` | | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` ``1.9`` | | ``intel/2018b`` ``20160107`` | ``-PacBio`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HTSplotter.md b/docs/version-specific/supported-software/h/HTSplotter.md index 90de5340c..4d5e5319d 100644 --- a/docs/version-specific/supported-software/h/HTSplotter.md +++ b/docs/version-specific/supported-software/h/HTSplotter.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HTSplotter HTSplotter allows an end-to-end data processing and analysis of chemical and genetic in vitro perturbation screens. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.15`` | ``foss/2022a`` ``2.11`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/Hadoop.md b/docs/version-specific/supported-software/h/Hadoop.md index b6fa1cada..ee9d79571 100644 --- a/docs/version-specific/supported-software/h/Hadoop.md +++ b/docs/version-specific/supported-software/h/Hadoop.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Hadoop Hadoop MapReduce by Cloudera @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``2.6.0-cdh5.7.0`` | ``-native`` | ``system`` ``2.6.0-cdh5.8.0`` | ``-native`` | ``system`` ``2.9.2`` | ``-native`` | ``GCCcore/7.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HarfBuzz.md b/docs/version-specific/supported-software/h/HarfBuzz.md index 0c47bce7b..96c1cf667 100644 --- a/docs/version-specific/supported-software/h/HarfBuzz.md +++ b/docs/version-specific/supported-software/h/HarfBuzz.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HarfBuzz HarfBuzz is an OpenType text shaping engine. @@ -31,3 +35,6 @@ version | toolchain ``5.3.1`` | ``GCCcore/12.2.0`` ``5.3.1`` | ``GCCcore/12.3.0`` ``8.2.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/Harminv.md b/docs/version-specific/supported-software/h/Harminv.md index c623b26ad..80fcc3201 100644 --- a/docs/version-specific/supported-software/h/Harminv.md +++ b/docs/version-specific/supported-software/h/Harminv.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Harminv Harminv is a free program (and accompanying library) to solve the problem of harmonic inversion - given a discrete-time, finite-length signal that consists of a sum of finitely-many sinusoids (possibly exponentially decaying) in a given bandwidth, it determines the frequencies, decay constants, amplitudes, and phases of those sinusoids. @@ -12,3 +16,6 @@ version | toolchain ``1.4.1`` | ``intel/2018a`` ``1.4.1`` | ``intel/2020a`` ``1.4.2`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HeFFTe.md b/docs/version-specific/supported-software/h/HeFFTe.md index ec841826d..728a8d448 100644 --- a/docs/version-specific/supported-software/h/HeFFTe.md +++ b/docs/version-specific/supported-software/h/HeFFTe.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HeFFTe Highly Efficient FFT for Exascale (HeFFTe) library @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0`` | ``foss/2020a`` ``2.4.0`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/Health-GPS.md b/docs/version-specific/supported-software/h/Health-GPS.md index b9a3a3a83..71ffefd37 100644 --- a/docs/version-specific/supported-software/h/Health-GPS.md +++ b/docs/version-specific/supported-software/h/Health-GPS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Health-GPS Health-GPS microsimulation is part of the STOP project, and support researchers and policy makers in the analysis of the health and economic impacts of alternative measures to tackle chronic diseases and obesity in children. The model reproduces the characteristics of a population and simulates key individual event histories associated with key components of relevant behaviours, such as physical activity, and diseases such as diabetes or cancer. To run the test-jobs with HealthGPS.Tests the data-directory, found in your installation folder, must be in the current path. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.1.3.0`` | ``GCCcore/11.3.0`` ``1.2.2.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/Hello.md b/docs/version-specific/supported-software/h/Hello.md index f57c7ffa8..4f415e495 100644 --- a/docs/version-specific/supported-software/h/Hello.md +++ b/docs/version-specific/supported-software/h/Hello.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Hello The GNU Hello program produces a familiar, friendly greeting. Yes, this is another implementation of the classic program that prints "Hello, world!" when you run it. However, unlike the minimal version often seen, GNU Hello processes its argument list to modify its behavior, supports greetings in many languages, and so on. @@ -7,3 +11,6 @@ The GNU Hello program produces a familiar, friendly greeting. Yes, this is anoth version | toolchain --------|---------- ``2.10`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HepMC.md b/docs/version-specific/supported-software/h/HepMC.md index 3c7bfba87..5328ff879 100644 --- a/docs/version-specific/supported-software/h/HepMC.md +++ b/docs/version-specific/supported-software/h/HepMC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HepMC HepMC is a standard for storing Monte Carlo event data. @@ -7,3 +11,6 @@ HepMC is a standard for storing Monte Carlo event data. version | toolchain --------|---------- ``2.06.11`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HepMC3.md b/docs/version-specific/supported-software/h/HepMC3.md index b1e550b11..44dfdd8bf 100644 --- a/docs/version-specific/supported-software/h/HepMC3.md +++ b/docs/version-specific/supported-software/h/HepMC3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HepMC3 HepMC is a standard for storing Monte Carlo event data. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.2.5`` | ``GCC/11.3.0`` ``3.2.6`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HiC-Pro.md b/docs/version-specific/supported-software/h/HiC-Pro.md index ec2c68a65..e2d99b722 100644 --- a/docs/version-specific/supported-software/h/HiC-Pro.md +++ b/docs/version-specific/supported-software/h/HiC-Pro.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HiC-Pro HiC-Pro was designed to process Hi-C data, from raw fastq files (paired-end Illumina data) to the normalized contact maps. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.9.0`` | ``-Python-2.7.12`` | ``foss/2016b`` ``3.1.0`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HiCExplorer.md b/docs/version-specific/supported-software/h/HiCExplorer.md index d47930b5a..b3e38ecaf 100644 --- a/docs/version-specific/supported-software/h/HiCExplorer.md +++ b/docs/version-specific/supported-software/h/HiCExplorer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HiCExplorer HiCexplorer addresses the common tasks of Hi-C analysis from processing to visualization. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.1.1`` | ``-Python-3.6.4`` | ``foss/2018a`` ``3.7.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HiCMatrix.md b/docs/version-specific/supported-software/h/HiCMatrix.md index c9b8234cc..4031d1780 100644 --- a/docs/version-specific/supported-software/h/HiCMatrix.md +++ b/docs/version-specific/supported-software/h/HiCMatrix.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HiCMatrix This library implements the central class of HiCExplorer to manage Hi-C interaction matrices. @@ -7,3 +11,6 @@ This library implements the central class of HiCExplorer to manage Hi-C interact version | toolchain --------|---------- ``17`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HiGHS.md b/docs/version-specific/supported-software/h/HiGHS.md index 02beaffd6..eddfd157d 100644 --- a/docs/version-specific/supported-software/h/HiGHS.md +++ b/docs/version-specific/supported-software/h/HiGHS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HiGHS Open source serial and parallel solvers for large-scale sparse linear programming (LP), mixed-integer programming (MIP), and quadratic programming (QP) models. @@ -7,3 +11,6 @@ Open source serial and parallel solvers for large-scale sparse linear programmin version | toolchain --------|---------- ``1.7.0`` | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HighFive.md b/docs/version-specific/supported-software/h/HighFive.md index 29c2d9aed..336e8f889 100644 --- a/docs/version-specific/supported-software/h/HighFive.md +++ b/docs/version-specific/supported-software/h/HighFive.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HighFive HighFive is a modern header-only C++11 friendly interface for libhdf5. @@ -9,3 +13,6 @@ version | toolchain ``2.6.2`` | ``gompi/2021a`` ``2.6.2`` | ``gompi/2022a`` ``2.7.1`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/Highway.md b/docs/version-specific/supported-software/h/Highway.md index 5e1df5448..778b285f5 100644 --- a/docs/version-specific/supported-software/h/Highway.md +++ b/docs/version-specific/supported-software/h/Highway.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Highway Highway is a C++ library for SIMD (Single Instruction, Multiple Data), i.e. applying the same operation to 'lanes'. @@ -13,3 +17,6 @@ version | toolchain ``1.0.4`` | ``GCCcore/11.3.0`` ``1.0.4`` | ``GCCcore/12.3.0`` ``1.0.7`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/Horovod.md b/docs/version-specific/supported-software/h/Horovod.md index 628ba4efe..fb2d67939 100644 --- a/docs/version-specific/supported-software/h/Horovod.md +++ b/docs/version-specific/supported-software/h/Horovod.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Horovod Horovod is a distributed training framework for TensorFlow. @@ -40,3 +44,6 @@ version | versionsuffix | toolchain ``0.28.1`` | ``-PyTorch-1.12.0`` | ``foss/2022a`` ``0.28.1`` | ``-PyTorch-1.9.0`` | ``fosscuda/2020b`` ``0.9.10`` | ``-Python-3.6.3`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HyPhy.md b/docs/version-specific/supported-software/h/HyPhy.md index dbb43f76b..2108502b7 100644 --- a/docs/version-specific/supported-software/h/HyPhy.md +++ b/docs/version-specific/supported-software/h/HyPhy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HyPhy HyPhy (Hypothesis Testing using Phylogenies) is an open-source software package for the analysis of genetic sequences (in particular the inference of natural selection) using techniques in phylogenetics, molecular evolution, and machine learning @@ -10,3 +14,6 @@ version | toolchain ``2.5.1`` | ``gompi/2019a`` ``2.5.33`` | ``gompi/2021a`` ``2.5.60`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HyPo.md b/docs/version-specific/supported-software/h/HyPo.md index 7a7100ac4..686446f54 100644 --- a/docs/version-specific/supported-software/h/HyPo.md +++ b/docs/version-specific/supported-software/h/HyPo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HyPo HyPo: Super Fast & Accurate Polisher for Long Read Genome Assemblies @@ -7,3 +11,6 @@ HyPo: Super Fast & Accurate Polisher for Long Read Genome Assemblies version | versionsuffix | toolchain --------|---------------|---------- ``1.0.3`` | ``-Python-3.7.4`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/Hybpiper.md b/docs/version-specific/supported-software/h/Hybpiper.md index df42751d2..7b18aa893 100644 --- a/docs/version-specific/supported-software/h/Hybpiper.md +++ b/docs/version-specific/supported-software/h/Hybpiper.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Hybpiper HybPiper was designed for targeted sequence capture, in which DNA sequencing libraries are enriched for gene regions of interest, especially for phylogenetics. HybPiper is a suite of Python scripts/modules that wrap and connect bioinformatics tools in order to extract target sequences from high-throughput DNA sequencing reads. @@ -7,3 +11,6 @@ HybPiper was designed for targeted sequence capture, in which DNA sequencing li version | toolchain --------|---------- ``2.1.6`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/Hydra.md b/docs/version-specific/supported-software/h/Hydra.md index 6e8007497..44f3440c5 100644 --- a/docs/version-specific/supported-software/h/Hydra.md +++ b/docs/version-specific/supported-software/h/Hydra.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Hydra Hydra is an open-source Python framework that simplifies the development of research and other complex applications. The key feature is the ability to dynamically create a hierarchical configuration by composition and override it through config files and the command line. The name Hydra comes from its ability to run multiple similar jobs - much like a Hydra with multiple heads. @@ -9,3 +13,6 @@ version | toolchain ``1.1.1`` | ``GCCcore/10.3.0`` ``1.3.2`` | ``GCCcore/11.3.0`` ``1.3.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/HyperQueue.md b/docs/version-specific/supported-software/h/HyperQueue.md index 282db7b15..333f45d03 100644 --- a/docs/version-specific/supported-software/h/HyperQueue.md +++ b/docs/version-specific/supported-software/h/HyperQueue.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # HyperQueue HyperQueue lets you build a computation plan consisting of a large amount of tasks and then execute it transparently over a system like SLURM/PBS. It dynamically groups jobs into SLURM/PBS jobs and distributes them to fully utilize allocated nodes. You thus do not have to manually aggregate your tasks into SLURM/PBS jobs. @@ -7,3 +11,6 @@ HyperQueue lets you build a computation plan consisting of a large amount of tas version | toolchain --------|---------- ``0.13.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/Hyperopt.md b/docs/version-specific/supported-software/h/Hyperopt.md index be9a8be09..eda72be8d 100644 --- a/docs/version-specific/supported-software/h/Hyperopt.md +++ b/docs/version-specific/supported-software/h/Hyperopt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Hyperopt hyperopt is a Python library for optimizing over awkward search spaces with real-valued, discrete, and conditional dimensions. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``0.2.5`` | | ``fosscuda/2020b`` ``0.2.7`` | | ``foss/2021a`` ``0.2.7`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/Hypre.md b/docs/version-specific/supported-software/h/Hypre.md index b939cc02a..953ea80f7 100644 --- a/docs/version-specific/supported-software/h/Hypre.md +++ b/docs/version-specific/supported-software/h/Hypre.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Hypre Hypre is a library for solving large, sparse linear systems of equations on massively parallel computers. The problems of interest arise in the simulation codes being developed at LLNL and elsewhere to study physical phenomena in the defense, environmental, energy, and biological sciences. @@ -25,3 +29,6 @@ version | toolchain ``2.25.0`` | ``foss/2022a`` ``2.27.0`` | ``foss/2022b`` ``2.29.0`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/h4toh5.md b/docs/version-specific/supported-software/h/h4toh5.md index 9d338ad9c..32fac499d 100644 --- a/docs/version-specific/supported-software/h/h4toh5.md +++ b/docs/version-specific/supported-software/h/h4toh5.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # h4toh5 The h4toh5 software consists of the h4toh5 and h5toh4 command-line utilities, as well as a conversion library for converting between individual HDF4 and HDF5 objects. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``2.2.3`` | | ``gompi/2019b`` ``2.2.3`` | | ``gompi/2020b`` ``2.2.5`` | | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/h5netcdf.md b/docs/version-specific/supported-software/h/h5netcdf.md index aca7fd3fe..9191fcbb4 100644 --- a/docs/version-specific/supported-software/h/h5netcdf.md +++ b/docs/version-specific/supported-software/h/h5netcdf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # h5netcdf A Python interface for the netCDF4 file-format that reads and writes local or remote HDF5 files directly via h5py or h5pyd, without relying on the Unidata netCDF library. @@ -9,3 +13,6 @@ version | toolchain ``1.1.0`` | ``foss/2021b`` ``1.2.0`` | ``foss/2022a`` ``1.2.0`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/h5py.md b/docs/version-specific/supported-software/h/h5py.md index ce0c438fb..346a82b83 100644 --- a/docs/version-specific/supported-software/h/h5py.md +++ b/docs/version-specific/supported-software/h/h5py.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # h5py HDF5 for Python (h5py) is a general-purpose Python interface to the Hierarchical Data Format library, version 5. HDF5 is a versatile, mature scientific software library designed for the fast, flexible storage of enormous amounts of data. @@ -78,3 +82,6 @@ version | versionsuffix | toolchain ``3.7.0`` | | ``intel/2022a`` ``3.8.0`` | | ``foss/2022b`` ``3.9.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hampel.md b/docs/version-specific/supported-software/h/hampel.md index 759c2460f..6d8f22845 100644 --- a/docs/version-specific/supported-software/h/hampel.md +++ b/docs/version-specific/supported-software/h/hampel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hampel The Hampel filter is generally used to detect anomalies in data with a timeseries structure. It basically consists of a sliding window of a parameterizable size. For each window, each observation will be compared with the Median Absolute Deviation (MAD). The observation will be considered an outlier in the case in which it exceeds the MAD by n times (the parameter n is also parameterizable). @@ -7,3 +11,6 @@ The Hampel filter is generally used to detect anomalies in data with a timeserie version | toolchain --------|---------- ``0.0.5`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hanythingondemand.md b/docs/version-specific/supported-software/h/hanythingondemand.md index a75a9f459..01defe656 100644 --- a/docs/version-specific/supported-software/h/hanythingondemand.md +++ b/docs/version-specific/supported-software/h/hanythingondemand.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hanythingondemand HanythingOnDemand (HOD) is a system for provisioning virtual Hadoop clusters over a large physical cluster. It uses the Torque resource manager to do node allocation. @@ -25,3 +29,6 @@ version | versionsuffix | toolchain ``3.2.0`` | ``-Python-2.7.12`` | ``intel/2016b`` ``3.2.2`` | ``-cli`` | ``system`` ``3.2.2`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/harmony.md b/docs/version-specific/supported-software/h/harmony.md index 592cd8dda..be951b738 100644 --- a/docs/version-specific/supported-software/h/harmony.md +++ b/docs/version-specific/supported-software/h/harmony.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # harmony Harmony is a general-purpose R package with an efficient algorithm for integrating multiple data sets. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.1.0-20210528`` | ``-R-4.0.3`` | ``foss/2020b`` ``1.0.0-20200224`` | ``-R-4.0.0`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hatch-jupyter-builder.md b/docs/version-specific/supported-software/h/hatch-jupyter-builder.md index a15155cf2..2b3bdef8c 100644 --- a/docs/version-specific/supported-software/h/hatch-jupyter-builder.md +++ b/docs/version-specific/supported-software/h/hatch-jupyter-builder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hatch-jupyter-builder Hatch Jupyter Builder is a plugin for the hatchling Python build backend. It is primarily targeted for package authors who are providing JavaScript as part of their Python packages. Typical use cases are Jupyter Lab Extensions and Jupyter Widgets. @@ -7,3 +11,6 @@ Hatch Jupyter Builder is a plugin for the hatchling Python build backend. It is version | toolchain --------|---------- ``0.9.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hatchling.md b/docs/version-specific/supported-software/h/hatchling.md index f237b2163..d9ddd7cd8 100644 --- a/docs/version-specific/supported-software/h/hatchling.md +++ b/docs/version-specific/supported-software/h/hatchling.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hatchling Extensible, standards compliant build backend used by Hatch, a modern, extensible Python project manager. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.18.0`` | ``GCCcore/12.3.0`` ``1.18.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hdWGCNA.md b/docs/version-specific/supported-software/h/hdWGCNA.md index e8eaf7ed8..766c476ba 100644 --- a/docs/version-specific/supported-software/h/hdWGCNA.md +++ b/docs/version-specific/supported-software/h/hdWGCNA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hdWGCNA hdWGCNA is an R package for performing weighted gene co-expression network analysis (WGCNA) in high dimensional transcriptomics data such as single-cell RNA-seq or spatial transcriptomics. hdWGCNA is highly modular and can construct context-specific co-expression networks across cellular and spatial hierarchies. hdWGNCA identifies modules of highly co-expressed genes and provides context for these modules via statistical testing and biological knowledge sources. hdWGCNA uses datasets formatted as Seurat objects. @@ -7,3 +11,6 @@ hdWGCNA is an R package for performing weighted gene co-expression network analy version | versionsuffix | toolchain --------|---------------|---------- ``0.3.00`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hdf5storage.md b/docs/version-specific/supported-software/h/hdf5storage.md index b2eb7f51f..f65ecbb31 100644 --- a/docs/version-specific/supported-software/h/hdf5storage.md +++ b/docs/version-specific/supported-software/h/hdf5storage.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hdf5storage This Python package provides high level utilities to read/write a variety of Python types to/from HDF5 (Heirarchal Data Format) formatted files. This package also provides support for MATLAB MAT v7.3 formatted files, which are just HDF5 files with a different extension and some extra meta-data. All of this is done without pickling data. Pickling is bad for security because it allows arbitrary code to be executed in the interpreter. One wants to be able to read possibly HDF5 and MAT files from untrusted sources, so pickling is avoided in this package. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.1.15`` | ``foss/2019a`` ``0.1.15`` | ``fosscuda/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/heaptrack.md b/docs/version-specific/supported-software/h/heaptrack.md index 3d35cd191..670d958da 100644 --- a/docs/version-specific/supported-software/h/heaptrack.md +++ b/docs/version-specific/supported-software/h/heaptrack.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # heaptrack A heap memory profiler for Linux. @@ -7,3 +11,6 @@ A heap memory profiler for Linux. version | toolchain --------|---------- ``1.1.0`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hector.md b/docs/version-specific/supported-software/h/hector.md index 1a3841d2b..2dbf7b7d0 100644 --- a/docs/version-specific/supported-software/h/hector.md +++ b/docs/version-specific/supported-software/h/hector.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hector This is the repository for Hector, an open source, object-oriented, simple global climate carbon-cycle model. It runs essentially instantaneously while still representing the most critical global scale earth system processes, and is one of a class of models heavily used for for emulating complex climate models and uncertainty analyses. @@ -7,3 +11,6 @@ This is the repository for Hector, an open source, object-oriented, simple glob version | toolchain --------|---------- ``2.5.0`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/help2man.md b/docs/version-specific/supported-software/h/help2man.md index 5d55d05b7..65ed1713c 100644 --- a/docs/version-specific/supported-software/h/help2man.md +++ b/docs/version-specific/supported-software/h/help2man.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # help2man help2man produces simple manual pages from the '--help' and '--version' output of other commands. @@ -42,3 +46,6 @@ version | toolchain ``1.49.3`` | ``GCCcore/13.2.0`` ``1.49.3`` | ``GCCcore/13.3.0`` ``1.49.3`` | ``GCCcore/14.1.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hevea.md b/docs/version-specific/supported-software/h/hevea.md index db995b84b..791f609a7 100644 --- a/docs/version-specific/supported-software/h/hevea.md +++ b/docs/version-specific/supported-software/h/hevea.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hevea A quite complete and fast LATEX to HTML translator @@ -7,3 +11,6 @@ A quite complete and fast LATEX to HTML translator version | toolchain --------|---------- ``2.36`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hic-straw.md b/docs/version-specific/supported-software/h/hic-straw.md index 1b84d31d8..184c208c8 100644 --- a/docs/version-specific/supported-software/h/hic-straw.md +++ b/docs/version-specific/supported-software/h/hic-straw.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hic-straw Straw is a library which allows rapid streaming of contact data from .hic files. @@ -7,3 +11,6 @@ Straw is a library which allows rapid streaming of contact data from .hic files. version | toolchain --------|---------- ``1.3.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hierfstat.md b/docs/version-specific/supported-software/h/hierfstat.md index 8bdfa34f2..50841e72e 100644 --- a/docs/version-specific/supported-software/h/hierfstat.md +++ b/docs/version-specific/supported-software/h/hierfstat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hierfstat Estimates hierarchical F-statistics from haploid or diploid genetic data with any numbers of levels in the hierarchy. @@ -7,3 +11,6 @@ Estimates hierarchical F-statistics from haploid or diploid genetic data with an version | versionsuffix | toolchain --------|---------------|---------- ``0.5-7`` | ``-R-4.0.0-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hifiasm.md b/docs/version-specific/supported-software/h/hifiasm.md index 5385781c3..627c0d352 100644 --- a/docs/version-specific/supported-software/h/hifiasm.md +++ b/docs/version-specific/supported-software/h/hifiasm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hifiasm Hifiasm: a haplotype-resolved assembler for accurate Hifi reads. @@ -11,3 +15,6 @@ version | toolchain ``0.16.1`` | ``GCCcore/10.3.0`` ``0.19.5`` | ``GCCcore/11.2.0`` ``0.19.7`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hipSYCL.md b/docs/version-specific/supported-software/h/hipSYCL.md index b3d81565b..78e630d5a 100644 --- a/docs/version-specific/supported-software/h/hipSYCL.md +++ b/docs/version-specific/supported-software/h/hipSYCL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hipSYCL hipSYCL is a modern SYCL implementation targeting CPUs and GPUs, with a focus on leveraging existing toolchains such as CUDA or HIP @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.9.1`` | ``GCC/10.2.0`` ``0.9.1`` | ``gcccuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hipify-clang.md b/docs/version-specific/supported-software/h/hipify-clang.md index 8af6b4690..7a72b2b95 100644 --- a/docs/version-specific/supported-software/h/hipify-clang.md +++ b/docs/version-specific/supported-software/h/hipify-clang.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hipify-clang Hipify-clang is a clang-based tool for translating CUDA sources into HIP sources. It translates CUDA source into an abstract syntax tree, which is traversed by transformation matchers. After applying all the matchers, the output HIP source is produced. @@ -7,3 +11,6 @@ Hipify-clang is a clang-based tool for translating CUDA sources into HIP sourc version | toolchain --------|---------- ``4.2.0`` | ``gcccuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hiredis.md b/docs/version-specific/supported-software/h/hiredis.md index d1aae5965..8b3c090f5 100644 --- a/docs/version-specific/supported-software/h/hiredis.md +++ b/docs/version-specific/supported-software/h/hiredis.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hiredis Hiredis is a minimalistic C client library for the Redis database. It is minimalistic because it just adds minimal support for the protocol, but at the same time it uses a high level printf-alike API in order to make it much higher level than otherwise suggested by its minimal code base and the lack of explicit bindings for every Redis command. @@ -11,3 +15,6 @@ version | toolchain ``1.2.0`` | ``GCCcore/12.2.0`` ``1.2.0`` | ``GCCcore/12.3.0`` ``1.2.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/histolab.md b/docs/version-specific/supported-software/h/histolab.md index 266fb6d75..05c04160e 100644 --- a/docs/version-specific/supported-software/h/histolab.md +++ b/docs/version-specific/supported-software/h/histolab.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # histolab Library for Digital Pathology Image Processing @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.4.1`` | ``foss/2021a`` ``0.4.1`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hivtrace.md b/docs/version-specific/supported-software/h/hivtrace.md index 5f283a1bf..92d88b8d0 100644 --- a/docs/version-specific/supported-software/h/hivtrace.md +++ b/docs/version-specific/supported-software/h/hivtrace.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hivtrace HIV-TRACE is an application that identifies potential transmission clusters within a supplied FASTA file with an option to find potential links against the Los Alamos HIV Sequence Database. @@ -7,3 +11,6 @@ HIV-TRACE is an application that identifies potential transmission clusters with version | toolchain --------|---------- ``0.6.2`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hl7apy.md b/docs/version-specific/supported-software/h/hl7apy.md index a8fd7e502..bd0b0deaa 100644 --- a/docs/version-specific/supported-software/h/hl7apy.md +++ b/docs/version-specific/supported-software/h/hl7apy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hl7apy Python library to parse, create and handle HL7 v2 messages. @@ -7,3 +11,6 @@ Python library to parse, create and handle HL7 v2 messages. version | versionsuffix | toolchain --------|---------------|---------- ``1.3.3`` | ``-Python-3.7.4`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hmmcopy_utils.md b/docs/version-specific/supported-software/h/hmmcopy_utils.md index 86452dc25..d85340234 100644 --- a/docs/version-specific/supported-software/h/hmmcopy_utils.md +++ b/docs/version-specific/supported-software/h/hmmcopy_utils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hmmcopy_utils Tools for extracting read counts and gc and mappability statistics in preparation for running HMMCopy. @@ -7,3 +11,6 @@ Tools for extracting read counts and gc and mappability statistics in preparatio version | toolchain --------|---------- ``20210728`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hmmlearn.md b/docs/version-specific/supported-software/h/hmmlearn.md index 805b39e9b..43804216a 100644 --- a/docs/version-specific/supported-software/h/hmmlearn.md +++ b/docs/version-specific/supported-software/h/hmmlearn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hmmlearn hmmlearn is a set of algorithms for unsupervised learning and inference of Hidden Markov Models @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.2.0`` | ``-Python-3.6.4`` | ``intel/2018a`` ``0.3.0`` | | ``foss/2022b`` ``0.3.0`` | | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/horton.md b/docs/version-specific/supported-software/h/horton.md index 72bfd7ef3..f1aa598cc 100644 --- a/docs/version-specific/supported-software/h/horton.md +++ b/docs/version-specific/supported-software/h/horton.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # horton HORTON is a Helpful Open-source Research TOol for N-fermion systems, written primarily in the Python programming language. (HORTON is named after the helpful pachyderm, not the Canadian caffeine supply store.) The ultimate goal of HORTON is to provide a platform for testing new ideas on the quantum many-body problem at a reasonable computational cost. Although HORTON is primarily designed to be a quantum-chemistry program, it can perform computations involving model Hamiltonians, and could be extended for computations in nuclear physics. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.1.1`` | ``-Python-2.7.15`` | ``foss/2018b`` ``2.1.1`` | ``-Python-2.7.15`` | ``intel/2018b`` ``2.1.1`` | ``-Python-2.7.18`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/how_are_we_stranded_here.md b/docs/version-specific/supported-software/h/how_are_we_stranded_here.md index a67ab94de..0aa1dfa06 100644 --- a/docs/version-specific/supported-software/h/how_are_we_stranded_here.md +++ b/docs/version-specific/supported-software/h/how_are_we_stranded_here.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # how_are_we_stranded_here Python package for testing strandedness of RNA-Seq fastq files @@ -7,3 +11,6 @@ Python package for testing strandedness of RNA-Seq fastq files version | toolchain --------|---------- ``1.0.1`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/htop.md b/docs/version-specific/supported-software/h/htop.md index badad8513..3fcec562d 100644 --- a/docs/version-specific/supported-software/h/htop.md +++ b/docs/version-specific/supported-software/h/htop.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # htop An interactive process viewer for Unix @@ -10,3 +14,6 @@ version | toolchain ``2.0.1`` | ``system`` ``3.2.1`` | ``system`` ``3.2.2`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hub.md b/docs/version-specific/supported-software/h/hub.md index 457d50b9c..f1bd447af 100644 --- a/docs/version-specific/supported-software/h/hub.md +++ b/docs/version-specific/supported-software/h/hub.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hub hub is a command-line wrapper for git that makes you better at GitHub. @@ -7,3 +11,6 @@ hub is a command-line wrapper for git that makes you better at GitHub. version | versionsuffix | toolchain --------|---------------|---------- ``2.2.2`` | ``-linux-amd64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/humann.md b/docs/version-specific/supported-software/h/humann.md index dfd1b0887..8a26343d5 100644 --- a/docs/version-specific/supported-software/h/humann.md +++ b/docs/version-specific/supported-software/h/humann.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # humann HUMAnN v3 is a pipeline for efficiently and accurately determining the coverage and abundance of microbial pathways in a community from metagenomic data. Sequencing a metagenome typically produces millions of short DNA/RNA reads. This process, referred to as functional profiling, aims to describe the metabolic potential of a microbial community and its members. More generally, functional profiling answers the question: What are the microbes in my community-of-interest doing (or capable of doing)? @@ -7,3 +11,6 @@ HUMAnN v3 is a pipeline for efficiently and accurately determining the coverage version | toolchain --------|---------- ``3.6`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hunspell.md b/docs/version-specific/supported-software/h/hunspell.md index 3e2231efa..a00fcfc62 100644 --- a/docs/version-specific/supported-software/h/hunspell.md +++ b/docs/version-specific/supported-software/h/hunspell.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hunspell Hunspell is a spell checker and morphological analyzer library and program designed for languages with rich morphology and complex word compounding or character encoding. @@ -11,3 +15,6 @@ version | toolchain ``1.7.1`` | ``GCCcore/11.2.0`` ``1.7.1`` | ``GCCcore/11.3.0`` ``1.7.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hwloc.md b/docs/version-specific/supported-software/h/hwloc.md index e35afca0a..1d637405f 100644 --- a/docs/version-specific/supported-software/h/hwloc.md +++ b/docs/version-specific/supported-software/h/hwloc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hwloc The Portable Hardware Locality (hwloc) software package provides a portable abstraction (across OS, versions, architectures, ...) of the hierarchical topology of modern architectures, including NUMA memory nodes, sockets, shared caches, cores and simultaneous multithreading. It also gathers various system attributes such as cache and memory information as well as the locality of I/O devices such as network interfaces, InfiniBand HCAs or GPUs. It primarily aims at helping applications with gathering information about modern computing hardware so as to exploit it accordingly and efficiently. @@ -54,3 +58,6 @@ version | toolchain ``2.8.0`` | ``GCCcore/12.2.0`` ``2.9.1`` | ``GCCcore/12.3.0`` ``2.9.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hyperspy.md b/docs/version-specific/supported-software/h/hyperspy.md index ebd5425ff..d1d611fb1 100644 --- a/docs/version-specific/supported-software/h/hyperspy.md +++ b/docs/version-specific/supported-software/h/hyperspy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hyperspy HyperSpy is an open source Python library which provides tools to facilitate the interactive data analysis of multi-dimensional datasets that can be described as multi-dimensional arrays of a given signal (e.g. a 2D array of spectra a.k.a spectrum image) @@ -7,3 +11,6 @@ HyperSpy is an open source Python library which provides tools to facilitate the version | versionsuffix | toolchain --------|---------------|---------- ``1.1.1`` | ``-Python-3.5.2`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/hypothesis.md b/docs/version-specific/supported-software/h/hypothesis.md index 8eeb2ee69..b730c3522 100644 --- a/docs/version-specific/supported-software/h/hypothesis.md +++ b/docs/version-specific/supported-software/h/hypothesis.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # hypothesis Hypothesis is an advanced testing library for Python. It lets you write tests which are parametrized by a source of examples, and then generates simple and comprehensible examples that make your tests fail. This lets you find more bugs in your code with less work. @@ -23,3 +27,6 @@ version | versionsuffix | toolchain ``6.7.0`` | | ``GCCcore/10.2.0`` ``6.82.0`` | | ``GCCcore/12.3.0`` ``6.90.0`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/h/index.md b/docs/version-specific/supported-software/h/index.md index 3b9f00d1e..0bdc585c1 100644 --- a/docs/version-specific/supported-software/h/index.md +++ b/docs/version-specific/supported-software/h/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (h) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - *h* - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [h4toh5](h4toh5.md) * [H5hut](H5hut.md) * [h5netcdf](h5netcdf.md) diff --git a/docs/version-specific/supported-software/i/I-TASSER.md b/docs/version-specific/supported-software/i/I-TASSER.md index ae3fdf9d1..b5fc797a1 100644 --- a/docs/version-specific/supported-software/i/I-TASSER.md +++ b/docs/version-specific/supported-software/i/I-TASSER.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # I-TASSER I-TASSER is a set of pre-compiled binaries and scripts for protein structure and function modelling and comparison. @@ -9,3 +13,6 @@ version | toolchain ``4.0`` | ``system`` ``4.2`` | ``system`` ``5.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ICA-AROMA.md b/docs/version-specific/supported-software/i/ICA-AROMA.md index 284282314..bf8a56262 100644 --- a/docs/version-specific/supported-software/i/ICA-AROMA.md +++ b/docs/version-specific/supported-software/i/ICA-AROMA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ICA-AROMA ICA-AROMA (i.e. 'ICA-based Automatic Removal Of Motion Artifacts') concerns a data-driven method to identify and remove motion-related independent components from fMRI data. @@ -7,3 +11,6 @@ ICA-AROMA (i.e. 'ICA-based Automatic Removal Of Motion Artifacts') concerns a da version | versionsuffix | toolchain --------|---------------|---------- ``0.4.4-beta`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ICON.md b/docs/version-specific/supported-software/i/ICON.md index 2a5b18c31..b0fcff20d 100644 --- a/docs/version-specific/supported-software/i/ICON.md +++ b/docs/version-specific/supported-software/i/ICON.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ICON ICON is a flexible, scalable, high-performance modelling framework for weather, climate and environmental prediction that provides actionable information for society and advances our understanding of the Earth's climate system. @@ -7,3 +11,6 @@ ICON is a flexible, scalable, high-performance modelling framework for weather, version | toolchain --------|---------- ``2024.01`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ICU.md b/docs/version-specific/supported-software/i/ICU.md index a9c43a26e..a4a26ebba 100644 --- a/docs/version-specific/supported-software/i/ICU.md +++ b/docs/version-specific/supported-software/i/ICU.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ICU ICU is a mature, widely used set of C/C++ and Java libraries providing Unicode and Globalization support for software applications. @@ -20,3 +24,6 @@ version | toolchain ``73.2`` | ``GCCcore/12.3.0`` ``74.1`` | ``GCCcore/13.2.0`` ``75.1`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IDBA-UD.md b/docs/version-specific/supported-software/i/IDBA-UD.md index f76be8661..a8376da54 100644 --- a/docs/version-specific/supported-software/i/IDBA-UD.md +++ b/docs/version-specific/supported-software/i/IDBA-UD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IDBA-UD IDBA-UD is a iterative De Bruijn Graph De Novo Assembler for Short Reads Sequencing data with Highly Uneven Sequencing Depth. It is an extension of IDBA algorithm. IDBA-UD also iterates from small k to a large k. In each iteration, short and low-depth contigs are removed iteratively with cutoff threshold from low to high to reduce the errors in low-depth and high-depth regions. Paired-end reads are aligned to contigs and assembled locally to generate some missing k-mers in low-depth regions. With these technologies, IDBA-UD can iterate k value of de Bruijn graph to a very large value with less gaps and less branches to form long contigs in both low-depth and high-depth regions. @@ -14,3 +18,6 @@ version | toolchain ``1.1.3`` | ``GCC/9.3.0`` ``1.1.3`` | ``foss/2018a`` ``1.1.3`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IDG.md b/docs/version-specific/supported-software/i/IDG.md index d60274bff..3091f4b99 100644 --- a/docs/version-specific/supported-software/i/IDG.md +++ b/docs/version-specific/supported-software/i/IDG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IDG Image Domain Gridding (IDG) is a fast method for convolutional resampling (gridding/degridding) of radio astronomical data (visibilities). Direction dependent effects (DDEs) or A-tems can be applied in the gridding process. The algorithm is described in "Image Domain Gridding: a fast method for convolutional resampling of visibilities", Van der Tol (2018). The implementation is described in "Radio-astronomical imaging on graphics processors", Veenboer (2020). Please cite these papers in publications using IDG. @@ -7,3 +11,6 @@ Image Domain Gridding (IDG) is a fast method for convolutional resampling (gridd version | toolchain --------|---------- ``1.2.0`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IGMPlot.md b/docs/version-specific/supported-software/i/IGMPlot.md index d26ecbb29..23e8efb78 100644 --- a/docs/version-specific/supported-software/i/IGMPlot.md +++ b/docs/version-specific/supported-software/i/IGMPlot.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IGMPlot IGMPlot is a free open-source program developed to identify molecular interactions and prepare data to build 2D and 3D representations of them in the molecular environment. @@ -9,3 +13,6 @@ version | toolchain ``2.4.2`` | ``GCC/8.3.0`` ``2.4.2`` | ``iccifort/2019.5.281`` ``2.6.9b`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IGV.md b/docs/version-specific/supported-software/i/IGV.md index 036bae70f..e963179b9 100644 --- a/docs/version-specific/supported-software/i/IGV.md +++ b/docs/version-specific/supported-software/i/IGV.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IGV This package contains command line utilities for preprocessing, computing feature count density (coverage), sorting, and indexing data files. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``2.5.0`` | ``-Java-11`` | ``system`` ``2.8.0`` | ``-Java-11`` | ``system`` ``2.9.4`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IGVTools.md b/docs/version-specific/supported-software/i/IGVTools.md index 82f270884..44d3c8669 100644 --- a/docs/version-specific/supported-software/i/IGVTools.md +++ b/docs/version-specific/supported-software/i/IGVTools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IGVTools This package contains command line utilities for preprocessing, computing feature count density (coverage), sorting, and indexing data files. See also http://www.broadinstitute.org/software/igv/igvtools_commandline. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.3.72`` | ``-Java-1.7.0_80`` | ``system`` ``2.3.75`` | ``-Java-1.7.0_80`` | ``system`` ``2.4.18`` | ``-Java-1.8`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IJulia.md b/docs/version-specific/supported-software/i/IJulia.md index dd946c9fb..9addf24b7 100644 --- a/docs/version-specific/supported-software/i/IJulia.md +++ b/docs/version-specific/supported-software/i/IJulia.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IJulia Julia kernel for Jupyter @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.23.3`` | ``-Julia-1.6.7`` | ``system`` ``1.24.0`` | ``-Julia-1.8.5`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ILAMB.md b/docs/version-specific/supported-software/i/ILAMB.md index 6c5266946..8bcd5fb60 100644 --- a/docs/version-specific/supported-software/i/ILAMB.md +++ b/docs/version-specific/supported-software/i/ILAMB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ILAMB The International Land Model Benchmarking (ILAMB) project is a model-data intercomparison and integration project designed to improve the performance of land models and, in parallel, improve the design of new measurement campaigns to reduce uncertainties associated with key land surface processes. @@ -7,3 +11,6 @@ The International Land Model Benchmarking (ILAMB) project is a model-data interc version | versionsuffix | toolchain --------|---------------|---------- ``2.5`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IMB.md b/docs/version-specific/supported-software/i/IMB.md index bc87481e4..513d69d5f 100644 --- a/docs/version-specific/supported-software/i/IMB.md +++ b/docs/version-specific/supported-software/i/IMB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IMB The Intel MPI Benchmarks perform a set of MPI performance measurements for point-to-point and global communication operations for a range of message sizes @@ -19,3 +23,6 @@ version | toolchain ``4.1`` | ``foss/2017a`` ``4.1`` | ``intel/2017.02`` ``4.1`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IML.md b/docs/version-specific/supported-software/i/IML.md index f36da2722..eb45e524b 100644 --- a/docs/version-specific/supported-software/i/IML.md +++ b/docs/version-specific/supported-software/i/IML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IML IML is a free library of C source code which implements algorithms for computing exact solutions to dense systems of linear equations over the integers. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.5`` | ``gfbf/2022a`` ``1.0.5`` | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IMOD.md b/docs/version-specific/supported-software/i/IMOD.md index fc1947e49..1f2389cc2 100644 --- a/docs/version-specific/supported-software/i/IMOD.md +++ b/docs/version-specific/supported-software/i/IMOD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IMOD IMOD is a set of image processing, modeling and display programs used for tomographic reconstruction and for 3D reconstruction of EM serial sections and optical sections. The package contains tools for assembling and aligning data within multiple types and sizes of image stacks, viewing 3-D data from any orientation, and modeling and display of the image files. IMOD was developed primarily by David Mastronarde, Rick Gaudette, Sue Held, Jim Kremer, Quanren Xiong, and John Heumann at the University of Colorado. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``4.11.5`` | | ``foss/2020b`` ``4.11.5`` | | ``fosscuda/2020b`` ``4.7.15`` | ``_RHEL6-64_CUDA6.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IMPUTE2.md b/docs/version-specific/supported-software/i/IMPUTE2.md index 526bcf44c..dc80df2b2 100644 --- a/docs/version-specific/supported-software/i/IMPUTE2.md +++ b/docs/version-specific/supported-software/i/IMPUTE2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IMPUTE2 IMPUTE version 2 (also known as IMPUTE2) is a genotype imputation and haplotype phasing program based on ideas from Howie et al. 2009 @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.3.0`` | ``_x86_64_static`` | ``system`` ``2.3.2`` | ``_x86_64_dynamic`` | ``system`` ``2.3.2`` | ``_x86_64_static`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IMa2.md b/docs/version-specific/supported-software/i/IMa2.md index 950663b70..a98d21462 100644 --- a/docs/version-specific/supported-software/i/IMa2.md +++ b/docs/version-specific/supported-software/i/IMa2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IMa2 IMa2 is a progam for population genetic analysis that can handle two or more populations. @@ -7,3 +11,6 @@ IMa2 is a progam for population genetic analysis that can handle two or more pop version | toolchain --------|---------- ``8.27.12`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IMa2p.md b/docs/version-specific/supported-software/i/IMa2p.md index 33e079123..3f0851a2b 100644 --- a/docs/version-specific/supported-software/i/IMa2p.md +++ b/docs/version-specific/supported-software/i/IMa2p.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IMa2p IMa2p is a parallel implementation of IMa2, using OpenMPI-C++ - a Bayesian MCMC based method for inferring population demography under the IM (Isolation with Migration) model. http://dx.doi.org/10.1111/1755-0998.12437 @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20151123`` | ``foss/2016a`` ``20160804`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/INTEGRATE-Neo.md b/docs/version-specific/supported-software/i/INTEGRATE-Neo.md index f32a0c20d..b2de37c3e 100644 --- a/docs/version-specific/supported-software/i/INTEGRATE-Neo.md +++ b/docs/version-specific/supported-software/i/INTEGRATE-Neo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # INTEGRATE-Neo INTEGRATE-Neo is a gene fusion neoantigen discovering tool using next-generation sequencing data. It is written in C++ and Python. @@ -7,3 +11,6 @@ INTEGRATE-Neo is a gene fusion neoantigen discovering tool using next-generation version | versionsuffix | toolchain --------|---------------|---------- ``1.2.1`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/INTEGRATE.md b/docs/version-specific/supported-software/i/INTEGRATE.md index d5615fc7a..e414e60b5 100644 --- a/docs/version-specific/supported-software/i/INTEGRATE.md +++ b/docs/version-specific/supported-software/i/INTEGRATE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # INTEGRATE INTEGRATE is a tool calling gene fusions with exact fusion junctions and genomic breakpoints by combining RNA-Seq and WGS data. It is highly sensitive and accurate by applying a fast split-read mapping algorithm based on Burrow-Wheeler transform. @@ -7,3 +11,6 @@ INTEGRATE is a tool calling gene fusions with exact fusion junctions and genomic version | toolchain --------|---------- ``0.2.6`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IOR.md b/docs/version-specific/supported-software/i/IOR.md index e11644b01..b5452fed9 100644 --- a/docs/version-specific/supported-software/i/IOR.md +++ b/docs/version-specific/supported-software/i/IOR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IOR The IOR software is used for benchmarking parallel file systems using POSIX, MPIIO, or HDF5 interfaces. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``3.3.0`` | | ``gompi/2021a`` ``3.3.0`` | | ``gompi/2022a`` ``4.0.0`` | | ``gompi/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IOzone.md b/docs/version-specific/supported-software/i/IOzone.md index 4da60006a..01cf3fdbe 100644 --- a/docs/version-specific/supported-software/i/IOzone.md +++ b/docs/version-specific/supported-software/i/IOzone.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IOzone IOzone is a filesystem benchmark tool. The benchmark generates and measures a variety of file operations. Iozone has been ported to many machines and runs under many operating systems. @@ -7,3 +11,6 @@ IOzone is a filesystem benchmark tool. The benchmark generates and measures a va version | toolchain --------|---------- ``3.434`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IPM.md b/docs/version-specific/supported-software/i/IPM.md index 6d8af1a7d..cf7b955d4 100644 --- a/docs/version-specific/supported-software/i/IPM.md +++ b/docs/version-specific/supported-software/i/IPM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IPM IPM is a portable profiling infrastructure for parallel codes. It provides a low-overhead profile of application performance and resource utilization in a parallel program. Communication, computation, and IO are the primary focus. @@ -11,3 +15,6 @@ version | toolchain ``2.0.6`` | ``iimpi/2019b`` ``2.0.6`` | ``iimpi/2020a`` ``2.0.6`` | ``iompi/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IPy.md b/docs/version-specific/supported-software/i/IPy.md index 290333d7e..f76611d73 100644 --- a/docs/version-specific/supported-software/i/IPy.md +++ b/docs/version-specific/supported-software/i/IPy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IPy Class and tools for handling of IPv4 and IPv6 addresses and networks @@ -7,3 +11,6 @@ Class and tools for handling of IPv4 and IPv6 addresses and networks version | toolchain --------|---------- ``0.83`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IPython.md b/docs/version-specific/supported-software/i/IPython.md index 758d9cf4b..6291abcac 100644 --- a/docs/version-specific/supported-software/i/IPython.md +++ b/docs/version-specific/supported-software/i/IPython.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IPython IPython provides a rich architecture for interactive computing with: Powerful interactive shells (terminal and Qt-based). A browser-based notebook with support for code, text, mathematical expressions, inline plots and other rich media. Support for interactive data visualization and use of GUI toolkits. Flexible, embeddable interpreters to load into your own projects. Easy to use, high performance tools for parallel computing. @@ -55,3 +59,6 @@ version | versionsuffix | toolchain ``8.14.0`` | | ``GCCcore/12.3.0`` ``8.17.2`` | | ``GCCcore/13.2.0`` ``8.5.0`` | | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IQ-TREE.md b/docs/version-specific/supported-software/i/IQ-TREE.md index c4cc5482a..b23280c2d 100644 --- a/docs/version-specific/supported-software/i/IQ-TREE.md +++ b/docs/version-specific/supported-software/i/IQ-TREE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IQ-TREE Efficient phylogenomic software by maximum likelihood @@ -19,3 +23,6 @@ version | versionsuffix | toolchain ``2.2.2.6`` | | ``gompi/2022a`` ``2.2.2.6`` | | ``gompi/2022b`` ``2.2.2.7`` | | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IRkernel.md b/docs/version-specific/supported-software/i/IRkernel.md index dbc377b4a..84d23bd1f 100644 --- a/docs/version-specific/supported-software/i/IRkernel.md +++ b/docs/version-specific/supported-software/i/IRkernel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IRkernel The R kernel for the 'Jupyter' environment executes R code which the front-end (Jupyter Notebook or other front-ends) submits to the kernel via the network. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``1.3`` | ``-R-4.2.0`` | ``foss/2021b`` ``1.3.2`` | ``-R-4.2.1`` | ``foss/2022a`` ``1.3.2`` | ``-R-4.3.2`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ISA-L.md b/docs/version-specific/supported-software/i/ISA-L.md index 146779d48..e3f1d5dc0 100644 --- a/docs/version-specific/supported-software/i/ISA-L.md +++ b/docs/version-specific/supported-software/i/ISA-L.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ISA-L Intelligent Storage Acceleration Library @@ -13,3 +17,6 @@ version | toolchain ``2.30.0`` | ``GCCcore/12.2.0`` ``2.30.0`` | ``GCCcore/12.3.0`` ``2.31.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ISL.md b/docs/version-specific/supported-software/i/ISL.md index 9aeb0f9a8..ed0eda7b9 100644 --- a/docs/version-specific/supported-software/i/ISL.md +++ b/docs/version-specific/supported-software/i/ISL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ISL isl is a library for manipulating sets and relations of integer points bounded by linear constraints. @@ -21,3 +25,6 @@ version | toolchain ``0.26`` | ``GCCcore/12.3.0`` ``0.26`` | ``GCCcore/13.2.0`` ``0.26`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ITK.md b/docs/version-specific/supported-software/i/ITK.md index 93f750962..5c9f9e869 100644 --- a/docs/version-specific/supported-software/i/ITK.md +++ b/docs/version-specific/supported-software/i/ITK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ITK Insight Segmentation and Registration Toolkit (ITK) provides an extensive suite of software tools for registering and segmenting multidimensional imaging data. @@ -27,3 +31,6 @@ version | versionsuffix | toolchain ``5.2.1`` | | ``foss/2022a`` ``5.2.1`` | | ``fosscuda/2020b`` ``5.3.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ITSTool.md b/docs/version-specific/supported-software/i/ITSTool.md index 79fedba01..52c10ebff 100644 --- a/docs/version-specific/supported-software/i/ITSTool.md +++ b/docs/version-specific/supported-software/i/ITSTool.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ITSTool ITS Tool allows you to translate your XML documents with PO files, using rules from the W3C Internationalization Tag Set (ITS) to determine what to translate and how to separate it into PO file messages. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``2.0.6`` | ``-Python-3.7.2`` | ``GCCcore/8.2.0`` ``2.0.7`` | | ``GCCcore/11.3.0`` ``2.0.7`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ITSx.md b/docs/version-specific/supported-software/i/ITSx.md index 3a61f2312..74e219041 100644 --- a/docs/version-specific/supported-software/i/ITSx.md +++ b/docs/version-specific/supported-software/i/ITSx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ITSx ITSx: Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for use in environmental sequencing. @@ -9,3 +13,6 @@ version | toolchain ``1.1.2`` | ``GCCcore/9.3.0`` ``1.1.3`` | ``GCCcore/10.3.0`` ``1.1.3`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IgBLAST.md b/docs/version-specific/supported-software/i/IgBLAST.md index 637df5f52..9d2a10684 100644 --- a/docs/version-specific/supported-software/i/IgBLAST.md +++ b/docs/version-specific/supported-software/i/IgBLAST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IgBLAST IgBLAST faclilitates the analysis of immunoglobulin and T cell receptor variable domain sequences. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.15.0`` | ``-x64-linux`` | ``system`` ``1.18.0`` | ``-x64-linux`` | ``system`` ``1.21.0`` | ``-x64-linux`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ImageJ.md b/docs/version-specific/supported-software/i/ImageJ.md index c1b72d75e..9bac256a2 100644 --- a/docs/version-specific/supported-software/i/ImageJ.md +++ b/docs/version-specific/supported-software/i/ImageJ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ImageJ Image Processing and Analysis in Java @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.51i`` | | ``system`` ``1.51k`` | | ``system`` ``1.52q`` | ``-Java-1.8`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ImageMagick.md b/docs/version-specific/supported-software/i/ImageMagick.md index a66f1b6a6..db560710d 100644 --- a/docs/version-specific/supported-software/i/ImageMagick.md +++ b/docs/version-specific/supported-software/i/ImageMagick.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ImageMagick ImageMagick is a software suite to create, edit, compose, or convert bitmap images @@ -31,3 +35,6 @@ version | versionsuffix | toolchain ``7.1.0-4`` | | ``GCCcore/11.2.0`` ``7.1.0-53`` | | ``GCCcore/12.2.0`` ``7.1.1-15`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/Imath.md b/docs/version-specific/supported-software/i/Imath.md index e5e708c26..9bb21ccb1 100644 --- a/docs/version-specific/supported-software/i/Imath.md +++ b/docs/version-specific/supported-software/i/Imath.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Imath Imath is a C++ and python library of 2D and 3D vector, matrix, and math operations for computer graphics @@ -10,3 +14,6 @@ version | toolchain ``3.1.6`` | ``GCCcore/12.2.0`` ``3.1.7`` | ``GCCcore/12.3.0`` ``3.1.9`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/Imlib2.md b/docs/version-specific/supported-software/i/Imlib2.md index ab80b22d1..27b59d68e 100644 --- a/docs/version-specific/supported-software/i/Imlib2.md +++ b/docs/version-specific/supported-software/i/Imlib2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Imlib2 This is the Imlib 2 library - a library that does image file loading and saving as well as rendering, manipulation, arbitrary polygon support, etc. It does ALL of these operations FAST. Imlib2 also tries to be highly intelligent about doing them, so writing naive programs can be done easily, without sacrificing speed. @@ -7,3 +11,6 @@ This is the Imlib 2 library - a library that does image file loading and saving version | toolchain --------|---------- ``1.5.1`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/InChI.md b/docs/version-specific/supported-software/i/InChI.md index 2e5429bc0..a40e76765 100644 --- a/docs/version-specific/supported-software/i/InChI.md +++ b/docs/version-specific/supported-software/i/InChI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # InChI The IUPAC International Chemical Identifier (InChI TM) is a non-proprietary identifier for chemical substances that can be used in printed and electronic data sources thus enabling easier linking of diverse data compilations. @@ -7,3 +11,6 @@ The IUPAC International Chemical Identifier (InChI TM) is a non-proprietary iden version | toolchain --------|---------- ``1.06`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/InParanoid.md b/docs/version-specific/supported-software/i/InParanoid.md index 5b95d4e32..41e7a09c1 100644 --- a/docs/version-specific/supported-software/i/InParanoid.md +++ b/docs/version-specific/supported-software/i/InParanoid.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # InParanoid InParanoid: ortholog groups with inparalogs. @@ -7,3 +11,6 @@ InParanoid: ortholog groups with inparalogs. version | toolchain --------|---------- ``5.0-20220607`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/Inelastica.md b/docs/version-specific/supported-software/i/Inelastica.md index 4c9d94af6..9fa56b35a 100644 --- a/docs/version-specific/supported-software/i/Inelastica.md +++ b/docs/version-specific/supported-software/i/Inelastica.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Inelastica Python package for eigenchannels, vibrations and inelastic electron transport based on SIESTA/TranSIESTA DFT. @@ -7,3 +11,6 @@ Python package for eigenchannels, vibrations and inelastic electron transport ba version | versionsuffix | toolchain --------|---------------|---------- ``1.3.5`` | ``-Python-2.7.15`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/Inferelator.md b/docs/version-specific/supported-software/i/Inferelator.md index c068ee673..6b94ab5aa 100644 --- a/docs/version-specific/supported-software/i/Inferelator.md +++ b/docs/version-specific/supported-software/i/Inferelator.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Inferelator Inferelator 3.0 is a package for gene regulatory network inference that is based on regularized regression. @@ -7,3 +11,6 @@ Inferelator 3.0 is a package for gene regulatory network inference that is based version | toolchain --------|---------- ``0.6.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/Infernal.md b/docs/version-specific/supported-software/i/Infernal.md index fcdb5b872..94cfc683b 100644 --- a/docs/version-specific/supported-software/i/Infernal.md +++ b/docs/version-specific/supported-software/i/Infernal.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Infernal Infernal ("INFERence of RNA ALignment") is for searching DNA sequence databases for RNA structure and sequence similarities. @@ -15,3 +19,6 @@ version | toolchain ``1.1.4`` | ``foss/2021b`` ``1.1.4`` | ``foss/2022a`` ``1.1.4`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/Infomap.md b/docs/version-specific/supported-software/i/Infomap.md index fcfa11be5..5a330cc00 100644 --- a/docs/version-specific/supported-software/i/Infomap.md +++ b/docs/version-specific/supported-software/i/Infomap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Infomap Multi-level network clustering based on the Map equation. @@ -7,3 +11,6 @@ Multi-level network clustering based on the Map equation. version | toolchain --------|---------- ``20190308`` | ``GCC/8.2.0-2.31.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/Inspector.md b/docs/version-specific/supported-software/i/Inspector.md index 3122414f3..c43e7afe6 100644 --- a/docs/version-specific/supported-software/i/Inspector.md +++ b/docs/version-specific/supported-software/i/Inspector.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Inspector Intel Inspector XE 2013 is an easy to use memory error checker and thread checker for serial and parallel applications @@ -20,3 +24,6 @@ version | toolchain ``2022.0.0`` | ``system`` ``2022.1.0`` | ``system`` ``2023.2.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IntaRNA.md b/docs/version-specific/supported-software/i/IntaRNA.md index 02a15370d..3a654e071 100644 --- a/docs/version-specific/supported-software/i/IntaRNA.md +++ b/docs/version-specific/supported-software/i/IntaRNA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IntaRNA Efficient RNA-RNA interaction prediction incorporating accessibility and seeding of interaction sites @@ -7,3 +11,6 @@ Efficient RNA-RNA interaction prediction incorporating accessibility and seeding version | versionsuffix | toolchain --------|---------------|---------- ``2.3.1`` | ``-Python-2.7.15`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IntelClusterChecker.md b/docs/version-specific/supported-software/i/IntelClusterChecker.md index 361eaefb3..e2d409395 100644 --- a/docs/version-specific/supported-software/i/IntelClusterChecker.md +++ b/docs/version-specific/supported-software/i/IntelClusterChecker.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IntelClusterChecker Verifies cluster components work together ― for - better uptime and productivity and lower total - cost of ownership (TCO) @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2017.1.016`` | ``system`` ``2021.5.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IntelDAAL.md b/docs/version-specific/supported-software/i/IntelDAAL.md index 3ff43a785..938a15471 100644 --- a/docs/version-specific/supported-software/i/IntelDAAL.md +++ b/docs/version-specific/supported-software/i/IntelDAAL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IntelDAAL Intel® Data Analytics Acceleration Library (Intel® DAAL) is the library of Intel® architecture optimized building blocks covering all stages of data analytics: data acquisition from a data source, preprocessing, transformation, data mining, modeling, validation, and decision making. @@ -7,3 +11,6 @@ Intel® Data Analytics Acceleration Library (Intel® DAAL) is the library of Int version | toolchain --------|---------- ``2019.4.007`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IntelPython.md b/docs/version-specific/supported-software/i/IntelPython.md index 1879bbf66..7166d176f 100644 --- a/docs/version-specific/supported-software/i/IntelPython.md +++ b/docs/version-specific/supported-software/i/IntelPython.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IntelPython Intel® Distribution for Python. Powered by Anaconda. Accelerating Python* performance on modern architectures from Intel. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.7.15`` | ``-2019.2.066`` | ``system`` ``3.6.8`` | ``-2019.2.066`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/InterOp.md b/docs/version-specific/supported-software/i/InterOp.md index 02e623e24..09c2f9254 100644 --- a/docs/version-specific/supported-software/i/InterOp.md +++ b/docs/version-specific/supported-software/i/InterOp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # InterOp The Illumina InterOp libraries are a set of common routines used for reading InterOp metric files produced by Illumina sequencers including NextSeq 1k/2k and NovaSeqX. These libraries are backwards compatible and capable of supporting prior releases of the software, with one exception: GA systems have been excluded. @@ -7,3 +11,6 @@ The Illumina InterOp libraries are a set of common routines used for reading Int version | toolchain --------|---------- ``1.2.4`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/InterProScan.md b/docs/version-specific/supported-software/i/InterProScan.md index 6d337b4fa..2cc0ceaa5 100644 --- a/docs/version-specific/supported-software/i/InterProScan.md +++ b/docs/version-specific/supported-software/i/InterProScan.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # InterProScan InterProScan is a sequence analysis application (nucleotide and protein sequences) that combines different protein signature recognition methods into one resource. @@ -12,3 +16,6 @@ version | toolchain ``5.52-86.0`` | ``GCCcore/10.3.0`` ``5.55-88.0`` | ``foss/2021a`` ``5.62-94.0`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/InterProScan_data.md b/docs/version-specific/supported-software/i/InterProScan_data.md index 26409e7d1..b9e214aaa 100644 --- a/docs/version-specific/supported-software/i/InterProScan_data.md +++ b/docs/version-specific/supported-software/i/InterProScan_data.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # InterProScan_data InterProScan is a sequence analysis application (nucleotide and protein sequences) that combines different protein signature recognition methods into one resource [data only]. @@ -7,3 +11,6 @@ InterProScan is a sequence analysis application (nucleotide and protein sequence version | toolchain --------|---------- ``5.55-88.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IonQuant.md b/docs/version-specific/supported-software/i/IonQuant.md index 6fa6d856f..87652bb3e 100644 --- a/docs/version-specific/supported-software/i/IonQuant.md +++ b/docs/version-specific/supported-software/i/IonQuant.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IonQuant IonQuant is a fast and comprehensive tool for MS1 precursor intensity-based quantification for timsTOF PASEF DDA and non-timsTOF (e.g., Orbitrap) data. It enables label-free quantification with false discovery (FDR) controlled match-between-runs (MBR). It can also be used for quantification in labelling-based experiments such as those involving SILAC, dimethyl, or similar labelling strategies. IonQuant is available as part of FragPipe. @@ -7,3 +11,6 @@ IonQuant is a fast and comprehensive tool for MS1 precursor intensity-based qua version | versionsuffix | toolchain --------|---------------|---------- ``1.10.12`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/Ipopt.md b/docs/version-specific/supported-software/i/Ipopt.md index 4ce0f482a..17491706b 100644 --- a/docs/version-specific/supported-software/i/Ipopt.md +++ b/docs/version-specific/supported-software/i/Ipopt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Ipopt Ipopt (Interior Point OPTimizer, pronounced eye-pea-Opt) is a software package for large-scale nonlinear optimization. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.12.13`` | ``intel/2019a`` ``3.12.9`` | ``foss/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/Iris.md b/docs/version-specific/supported-software/i/Iris.md index f8f3d3fd3..051f0f22c 100644 --- a/docs/version-specific/supported-software/i/Iris.md +++ b/docs/version-specific/supported-software/i/Iris.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Iris A module for improving the insertion sequences of structural variant calls @@ -7,3 +11,6 @@ A module for improving the insertion sequences of structural variant calls version | versionsuffix | toolchain --------|---------------|---------- ``1.0.5`` | ``-Java-15`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IronPython.md b/docs/version-specific/supported-software/i/IronPython.md index 27e5452cf..8079e249b 100644 --- a/docs/version-specific/supported-software/i/IronPython.md +++ b/docs/version-specific/supported-software/i/IronPython.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IronPython IronPython is an open-source implementation of the Python programming language which is tightly integrated with the .NET Framework. IronPython can use the .NET Framework and Python libraries, and other .NET languages can use Python code just as easily. @@ -7,3 +11,6 @@ IronPython is an open-source implementation of the Python programming language version | toolchain --------|---------- ``2.7`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IsoNet.md b/docs/version-specific/supported-software/i/IsoNet.md index e46c4ce80..e25362693 100644 --- a/docs/version-specific/supported-software/i/IsoNet.md +++ b/docs/version-specific/supported-software/i/IsoNet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IsoNet IsoNet stands for for ISOtropic reconstructioN of Electron Tomography. It trains deep convolutional neural networks to reconstruct meaningful contents in the mis sing wedge for electron tomography, and to increase signal-to-noise ratio, using the information learned from the original tomogram. The software requires tomograms as input. Observing at about 30A resolution, the IsoNet generated tomograms are largely isotropic. @@ -7,3 +11,6 @@ IsoNet stands for for ISOtropic reconstructioN of Electron Tomography. It trains version | toolchain --------|---------- ``0.1_20210822_04_674f67f`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IsoQuant.md b/docs/version-specific/supported-software/i/IsoQuant.md index d2398d551..317f248d1 100644 --- a/docs/version-specific/supported-software/i/IsoQuant.md +++ b/docs/version-specific/supported-software/i/IsoQuant.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IsoQuant IsoQuant is a tool for the genome-based analysis of long RNA reads, such as PacBio or Oxford Nanopores. IsoQuant allows to reconstruct and quantify transcript models with high precision and decent recall. If the reference annotation is given, IsoQuant also assigns reads to the annotated isoforms based on their intron and exon structure. IsoQuant further performs annotated gene, isoform, exon and intron quantification. If reads are grouped (e.g. according to cell type), counts are reported according to the provided grouping. @@ -7,3 +11,6 @@ IsoQuant is a tool for the genome-based analysis of long RNA reads, such as Pac version | toolchain --------|---------- ``3.3.0`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IsoSeq.md b/docs/version-specific/supported-software/i/IsoSeq.md index 65acb06f8..34e3b14fe 100644 --- a/docs/version-specific/supported-software/i/IsoSeq.md +++ b/docs/version-specific/supported-software/i/IsoSeq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IsoSeq IsoSeq v3 contains the newest tools to identify transcripts in PacBio single-molecule sequencing data. Starting in SMRT Link v6.0.0, those tools power the IsoSeq GUI-based analysis application. A composable workflow of existing tools and algorithms, combined with a new clustering technique, allows to process the ever-increasing yield of PacBio machines with similar performance to IsoSeq versions 1 and 2. Starting with version 3.4, support for UMI and cell barcode based deduplication has been added. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.8.2`` | ``-linux-x86_64`` | ``system`` ``4.0.0`` | ``-linux-x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/IsoformSwitchAnalyzeR.md b/docs/version-specific/supported-software/i/IsoformSwitchAnalyzeR.md index 002fc5c7e..e6ab09b56 100644 --- a/docs/version-specific/supported-software/i/IsoformSwitchAnalyzeR.md +++ b/docs/version-specific/supported-software/i/IsoformSwitchAnalyzeR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # IsoformSwitchAnalyzeR Analysis of alternative splicing and isoform switches with predicted functional consequences (e.g. gain/loss of protein domains etc.) from quantification of all types of RNASeq by tools such as Kallisto, Salmon, StringTie, Cufflinks/Cuffdiff etc. @@ -7,3 +11,6 @@ Analysis of alternative splicing and isoform switches with predicted functional version | versionsuffix | toolchain --------|---------------|---------- ``1.18.0`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/i-PI.md b/docs/version-specific/supported-software/i/i-PI.md index b9d86185e..c7a7e7c59 100644 --- a/docs/version-specific/supported-software/i/i-PI.md +++ b/docs/version-specific/supported-software/i/i-PI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # i-PI A Python wrapper for (ab initio) (path integrals) molecular dynamics @@ -7,3 +11,6 @@ A Python wrapper for (ab initio) (path integrals) molecular dynamics version | versionsuffix | toolchain --------|---------------|---------- ``1.0-20160213`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/i-cisTarget.md b/docs/version-specific/supported-software/i/i-cisTarget.md index 312dc01c3..b11c8f4f7 100644 --- a/docs/version-specific/supported-software/i/i-cisTarget.md +++ b/docs/version-specific/supported-software/i/i-cisTarget.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # i-cisTarget An integrative genomics method for the prediction of regulatory features and cis-regulatory modules in Human, Mouse, and Fly @@ -7,3 +11,6 @@ An integrative genomics method for the prediction of regulatory features and cis version | versionsuffix | toolchain --------|---------------|---------- ``20160602`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/i7z.md b/docs/version-specific/supported-software/i/i7z.md index 8ee684c24..586ba7ce2 100644 --- a/docs/version-specific/supported-software/i/i7z.md +++ b/docs/version-specific/supported-software/i/i7z.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # i7z A better i7 (and now i3, i5) reporting tool for Linux @@ -7,3 +11,6 @@ A better i7 (and now i3, i5) reporting tool for Linux version | toolchain --------|---------- ``20131012`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/iCount.md b/docs/version-specific/supported-software/i/iCount.md index 1f9d91bf2..bd1d4f4fd 100644 --- a/docs/version-specific/supported-software/i/iCount.md +++ b/docs/version-specific/supported-software/i/iCount.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # iCount iCount: protein-RNA interaction analysis is a Python module and associated command-line interface (CLI), which provides all the commands needed to process iCLIP data on protein-RNA interactions. @@ -7,3 +11,6 @@ iCount: protein-RNA interaction analysis is a Python module and associated comm version | versionsuffix | toolchain --------|---------------|---------- ``20180820`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/iVar.md b/docs/version-specific/supported-software/i/iVar.md index d716b8194..32b90690d 100644 --- a/docs/version-specific/supported-software/i/iVar.md +++ b/docs/version-specific/supported-software/i/iVar.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # iVar iVar is a computational package that contains functions broadly useful for viral amplicon-based sequencing. @@ -9,3 +13,6 @@ version | toolchain ``1.0.1`` | ``foss/2018b`` ``1.3.1`` | ``GCC/10.2.0`` ``1.3.1`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/icc.md b/docs/version-specific/supported-software/i/icc.md index 5c419cbff..e8e6f9f44 100644 --- a/docs/version-specific/supported-software/i/icc.md +++ b/docs/version-specific/supported-software/i/icc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # icc C and C++ compiler from Intel @@ -32,3 +36,6 @@ version | versionsuffix | toolchain ``2019.2.187`` | ``-GCC-8.2.0-2.31.1`` | ``system`` ``2019.3.199`` | ``-GCC-8.3.0-2.32`` | ``system`` ``system`` | ``-GCC-system-2.29`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/iccifort.md b/docs/version-specific/supported-software/i/iccifort.md index 3d6cf2324..adcfda8ca 100644 --- a/docs/version-specific/supported-software/i/iccifort.md +++ b/docs/version-specific/supported-software/i/iccifort.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # iccifort Intel Cluster Toolkit Compiler Edition provides Intel C,C++ and fortran compilers, Intel MPI and Intel MKL @@ -36,3 +40,6 @@ version | versionsuffix | toolchain ``2020.1.217`` | | ``system`` ``2020.4.304`` | | ``system`` ``system`` | ``-GCC-system-2.29`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/iccifortcuda.md b/docs/version-specific/supported-software/i/iccifortcuda.md index 1b04e1e73..a15f6c27f 100644 --- a/docs/version-specific/supported-software/i/iccifortcuda.md +++ b/docs/version-specific/supported-software/i/iccifortcuda.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # iccifortcuda Intel Cluster Toolkit Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MPI & Intel MKL, with CUDA toolkit @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``2019b`` | | ``system`` ``2020a`` | | ``system`` ``2020b`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/iced.md b/docs/version-specific/supported-software/i/iced.md index 0ef616839..b8d45f858 100644 --- a/docs/version-specific/supported-software/i/iced.md +++ b/docs/version-specific/supported-software/i/iced.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # iced Implements the ICE normalization of hic data. @@ -7,3 +11,6 @@ Implements the ICE normalization of hic data. version | toolchain --------|---------- ``0.5.10`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ichorCNA.md b/docs/version-specific/supported-software/i/ichorCNA.md index 26f5b3f12..507ba3358 100644 --- a/docs/version-specific/supported-software/i/ichorCNA.md +++ b/docs/version-specific/supported-software/i/ichorCNA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ichorCNA ichorCNA is a tool for estimating the fraction of tumor in cell-free DNA from ultra-low-pass whole genome sequencing @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.2.0`` | ``foss/2019b`` ``0.3.2-20191219`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/icmake.md b/docs/version-specific/supported-software/i/icmake.md index 0e957b4ac..255f046c9 100644 --- a/docs/version-specific/supported-software/i/icmake.md +++ b/docs/version-specific/supported-software/i/icmake.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # icmake Icmake is a hybrid between a 'make' utility and a 'shell script' language. Originally, it was written to provide a useful tool for automatic program maintenance and system administrative tasks on old MS-DOS platforms. @@ -7,3 +11,6 @@ Icmake is a hybrid between a 'make' utility and a 'shell script' language. Origi version | toolchain --------|---------- ``7.23.02`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/idemux.md b/docs/version-specific/supported-software/i/idemux.md index 1e72aab37..a750c6579 100644 --- a/docs/version-specific/supported-software/i/idemux.md +++ b/docs/version-specific/supported-software/i/idemux.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # idemux idemux - inline barcode demultiplexing Idemux is a command line tool designed to demultiplex paired-end FASTQ files from QuantSeq-Pool. @@ -7,3 +11,6 @@ idemux - inline barcode demultiplexing Idemux is a command line tool designed to version | toolchain --------|---------- ``0.1.6`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ieeg-cli.md b/docs/version-specific/supported-software/i/ieeg-cli.md index 68664acb8..acb64118a 100644 --- a/docs/version-specific/supported-software/i/ieeg-cli.md +++ b/docs/version-specific/supported-software/i/ieeg-cli.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ieeg-cli IEEG.ORG is a collaborative initiative funded by the National Institutes of Neurological Disorders and Stroke. This initiative seeks to advance research towards the understanding of epilepsy by providing a platform for sharing data, tools and expertise between researchers. @@ -7,3 +11,6 @@ IEEG.ORG is a collaborative initiative funded by the National Institutes of Neu version | toolchain --------|---------- ``1.14.56`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ifort.md b/docs/version-specific/supported-software/i/ifort.md index 55001f6e6..7ae6b019b 100644 --- a/docs/version-specific/supported-software/i/ifort.md +++ b/docs/version-specific/supported-software/i/ifort.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ifort Fortran compiler from Intel @@ -32,3 +36,6 @@ version | versionsuffix | toolchain ``2019.2.187`` | ``-GCC-8.2.0-2.31.1`` | ``system`` ``2019.3.199`` | ``-GCC-8.3.0-2.32`` | ``system`` ``system`` | ``-GCC-system-2.29`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/igraph.md b/docs/version-specific/supported-software/i/igraph.md index d9d7e10f1..4a441741c 100644 --- a/docs/version-specific/supported-software/i/igraph.md +++ b/docs/version-specific/supported-software/i/igraph.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # igraph igraph is a collection of network analysis tools with the emphasis on efficiency, portability and ease of use. igraph is open source and free. igraph can be programmed in R, Python and C/C++. @@ -19,3 +23,6 @@ version | toolchain ``0.9.1`` | ``fosscuda/2020b`` ``0.9.4`` | ``foss/2021a`` ``0.9.5`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/igv-reports.md b/docs/version-specific/supported-software/i/igv-reports.md index f6815a5fa..1a69e5ffc 100644 --- a/docs/version-specific/supported-software/i/igv-reports.md +++ b/docs/version-specific/supported-software/i/igv-reports.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # igv-reports Python application to generate self-contained igv.js pages that can be opened within a browser with "file" protocol. @@ -7,3 +11,6 @@ Python application to generate self-contained igv.js pages that can be opened wi version | versionsuffix | toolchain --------|---------------|---------- ``0.9.8`` | ``-Python-3.7.4`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/igvShiny.md b/docs/version-specific/supported-software/i/igvShiny.md index 246fbc7d0..113c33276 100644 --- a/docs/version-specific/supported-software/i/igvShiny.md +++ b/docs/version-specific/supported-software/i/igvShiny.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # igvShiny An htmlwidget version of igv, for RStudio and Shiny apps @@ -7,3 +11,6 @@ An htmlwidget version of igv, for RStudio and Shiny apps version | versionsuffix | toolchain --------|---------------|---------- ``20240112`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/iibff.md b/docs/version-specific/supported-software/i/iibff.md index 8694e3e7f..e39a6ed39 100644 --- a/docs/version-specific/supported-software/i/iibff.md +++ b/docs/version-specific/supported-software/i/iibff.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # iibff GCC and GFortran based compiler toolchain with OpenMPI, BLIS, libFLAME, ScaLAPACK and FFTW. @@ -7,3 +11,6 @@ GCC and GFortran based compiler toolchain with OpenMPI, BLIS, libFLAME, ScaLAPAC version | toolchain --------|---------- ``2020b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/iimkl.md b/docs/version-specific/supported-software/i/iimkl.md index 28bb30fff..dba45d0e6 100644 --- a/docs/version-specific/supported-software/i/iimkl.md +++ b/docs/version-specific/supported-software/i/iimkl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # iimkl Intel C/C++ and Fortran compilers, alongside Intel Math Kernel Library (MKL). @@ -11,3 +15,6 @@ version | toolchain ``2022b`` | ``system`` ``2023a`` | ``system`` ``2023b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/iimpi.md b/docs/version-specific/supported-software/i/iimpi.md index db5902b5a..415a087de 100644 --- a/docs/version-specific/supported-software/i/iimpi.md +++ b/docs/version-specific/supported-software/i/iimpi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # iimpi Intel C/C++ and Fortran compilers, alongside Intel MPI. @@ -53,3 +57,6 @@ version | versionsuffix | toolchain ``2023b`` | | ``system`` ``8.1.5`` | ``-GCC-4.9.3-2.25`` | ``system`` ``system`` | ``-GCC-system-2.29`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/iimpic.md b/docs/version-specific/supported-software/i/iimpic.md index cd9d86985..65c69643f 100644 --- a/docs/version-specific/supported-software/i/iimpic.md +++ b/docs/version-specific/supported-software/i/iimpic.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # iimpic Intel C/C++ and Fortran compilers, alongside Intel MPI. @@ -12,3 +16,6 @@ version | toolchain ``2019b`` | ``system`` ``2020a`` | ``system`` ``2020b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/imagecodecs.md b/docs/version-specific/supported-software/i/imagecodecs.md index ac4e6b9ba..3020c354a 100644 --- a/docs/version-specific/supported-software/i/imagecodecs.md +++ b/docs/version-specific/supported-software/i/imagecodecs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # imagecodecs Imagecodecs is a Python library that provides block-oriented, in-memory buffer transformation, compression, and decompression functions for use in the tifffile, czifile, zarr, and other scientific image input/output modules. @@ -10,3 +14,6 @@ version | toolchain ``2022.9.26`` | ``foss/2021a`` ``2022.9.26`` | ``foss/2022a`` ``2024.1.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/imageio.md b/docs/version-specific/supported-software/i/imageio.md index ba6ea17df..501a77714 100644 --- a/docs/version-specific/supported-software/i/imageio.md +++ b/docs/version-specific/supported-software/i/imageio.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # imageio Imageio is a Python library that provides an easy interface to read and write a wide range of image data, including animated images, video, volumetric data, and scientific formats. @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``2.9.0`` | | ``foss/2020b`` ``2.9.0`` | | ``fosscuda/2020b`` ``2.9.0`` | ``-Python-3.7.4`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/imake.md b/docs/version-specific/supported-software/i/imake.md index 171ad9ecd..5cdfdcedd 100644 --- a/docs/version-specific/supported-software/i/imake.md +++ b/docs/version-specific/supported-software/i/imake.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # imake imake is a Makefile-generator that is intended to make it easier to develop software portably for multiple systems. @@ -10,3 +14,6 @@ version | toolchain ``1.0.8`` | ``GCCcore/10.2.0`` ``1.0.8`` | ``GCCcore/10.3.0`` ``1.0.8`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/imbalanced-learn.md b/docs/version-specific/supported-software/i/imbalanced-learn.md index 6f012ff28..9af31e952 100644 --- a/docs/version-specific/supported-software/i/imbalanced-learn.md +++ b/docs/version-specific/supported-software/i/imbalanced-learn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # imbalanced-learn imbalanced-learn is a Python package offering a number of re-sampling techniques commonly used in datasets showing strong between-class imbalance. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``0.4.3`` | ``-Python-3.6.6`` | ``foss/2018b`` ``0.7.0`` | | ``foss/2020b`` ``0.9.0`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/imgaug.md b/docs/version-specific/supported-software/i/imgaug.md index aa13d87b8..dde33f020 100644 --- a/docs/version-specific/supported-software/i/imgaug.md +++ b/docs/version-specific/supported-software/i/imgaug.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # imgaug This python library helps you with augmenting images for your machine learning projects. It converts a set of input images into a new, much larger set of slightly altered images. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``0.4.0`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.4.0`` | | ``foss/2022a`` ``0.4.1`` | ``-CUDA-12.1.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/imkl-FFTW.md b/docs/version-specific/supported-software/i/imkl-FFTW.md index 8a717be16..98f0fe373 100644 --- a/docs/version-specific/supported-software/i/imkl-FFTW.md +++ b/docs/version-specific/supported-software/i/imkl-FFTW.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # imkl-FFTW FFTW interfaces using Intel oneAPI Math Kernel Library @@ -20,3 +24,6 @@ version | toolchain ``2023.2.0`` | ``iimpi/2023.07`` ``2023.2.0`` | ``iimpi/2023b`` ``2024.0.0`` | ``iimpi/2023.11`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/imkl.md b/docs/version-specific/supported-software/i/imkl.md index dd7a005df..0668bb87e 100644 --- a/docs/version-specific/supported-software/i/imkl.md +++ b/docs/version-specific/supported-software/i/imkl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # imkl Intel Math Kernel Library is a library of highly optimized, extensively threaded math routines for science, engineering, and financial applications that require maximum performance. Core math functions include BLAS, LAPACK, ScaLAPACK, Sparse Solvers, Fast Fourier Transforms, Vector Math, and more. @@ -89,3 +93,6 @@ version | versionsuffix | toolchain ``2023.1.0`` | | ``system`` ``2023.2.0`` | | ``system`` ``2024.0.0`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/immunedeconv.md b/docs/version-specific/supported-software/i/immunedeconv.md index d5dcf1620..e988f2882 100644 --- a/docs/version-specific/supported-software/i/immunedeconv.md +++ b/docs/version-specific/supported-software/i/immunedeconv.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # immunedeconv immunedeconv is an R package for unified access to computational methods for estimating immune cell fractions from bulk RNA sequencing data. @@ -7,3 +11,6 @@ immunedeconv is an R package for unified access to computational methods for est version | versionsuffix | toolchain --------|---------------|---------- ``2.0.2`` | ``-R-4.0.0`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/impi.md b/docs/version-specific/supported-software/i/impi.md index ad8f5438b..61bf46e92 100644 --- a/docs/version-specific/supported-software/i/impi.md +++ b/docs/version-specific/supported-software/i/impi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # impi The Intel(R) MPI Library for Linux* OS is a multi-fabric message passing library based on ANL MPICH2 and OSU MVAPICH2. The Intel MPI Library for Linux OS implements the Message Passing Interface, version 3.1 (MPI-3) specification. @@ -71,3 +75,6 @@ version | versionsuffix | toolchain ``5.1.3.181`` | | ``iccifort/2016.3.210-GCC-5.4.0-2.26`` ``5.1.3.181`` | | ``iccifortcuda/2016.10`` ``system`` | | ``iccifort/system-GCC-system-2.29`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/imutils.md b/docs/version-specific/supported-software/i/imutils.md index 6cbe55c5b..d40b10984 100644 --- a/docs/version-specific/supported-software/i/imutils.md +++ b/docs/version-specific/supported-software/i/imutils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # imutils A series of convenience functions to make basic image processing operations such as translation, rotation, resizing, skeletonization, and displaying Matplotlib images easier with OpenCV and Python. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.5.4`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.5.4`` | | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/index.md b/docs/version-specific/supported-software/i/index.md index 4609a0fe3..f333651bd 100644 --- a/docs/version-specific/supported-software/i/index.md +++ b/docs/version-specific/supported-software/i/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (i) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - *i* - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [i-cisTarget](i-cisTarget.md) * [i-PI](i-PI.md) * [I-TASSER](I-TASSER.md) diff --git a/docs/version-specific/supported-software/i/indicators.md b/docs/version-specific/supported-software/i/indicators.md index 6b5394b97..c8cb24d45 100644 --- a/docs/version-specific/supported-software/i/indicators.md +++ b/docs/version-specific/supported-software/i/indicators.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # indicators - Thread-safe progress bars and spinners - Header-only library. Grab a copy of include/indicators. - Single-header version in single_include/indicators. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.2`` | ``GCCcore/11.2.0`` ``2.2`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/inferCNV.md b/docs/version-specific/supported-software/i/inferCNV.md index 89d90088e..24a3994db 100644 --- a/docs/version-specific/supported-software/i/inferCNV.md +++ b/docs/version-specific/supported-software/i/inferCNV.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # inferCNV InferCNV is used to explore tumor single cell RNA-Seq data to identify evidence for somatic large-scale chromosomal copy number alterations, such as gains or deletions of entire chromosomes or large segments of chromosomes. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``1.3.3`` | ``-Python-3.8.2`` | ``foss/2020a`` ``1.3.3`` | | ``foss/2020b`` ``1.3.3`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/infercnvpy.md b/docs/version-specific/supported-software/i/infercnvpy.md index 608b84f8a..46640704c 100644 --- a/docs/version-specific/supported-software/i/infercnvpy.md +++ b/docs/version-specific/supported-software/i/infercnvpy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # infercnvpy Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy. @@ -9,3 +13,6 @@ version | toolchain ``0.4.0`` | ``foss/2021b`` ``0.4.2`` | ``foss/2022a`` ``0.4.3`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/inflection.md b/docs/version-specific/supported-software/i/inflection.md index b725f6437..af6aa1652 100644 --- a/docs/version-specific/supported-software/i/inflection.md +++ b/docs/version-specific/supported-software/i/inflection.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # inflection inflection is a package that finds the inflection point of a planar curve which is given as a data frame of discrete (xi,yi) points @@ -7,3 +11,6 @@ inflection is a package that finds the inflection point of a planar curve which version | versionsuffix | toolchain --------|---------------|---------- ``1.3.5`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/inih.md b/docs/version-specific/supported-software/i/inih.md index 8b0ce793f..4a96bbe64 100644 --- a/docs/version-specific/supported-software/i/inih.md +++ b/docs/version-specific/supported-software/i/inih.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # inih Direct Rendering Manager runtime library. @@ -7,3 +11,6 @@ Direct Rendering Manager runtime library. version | toolchain --------|---------- ``57`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/inline.md b/docs/version-specific/supported-software/i/inline.md index dfdb2da6b..81787f430 100644 --- a/docs/version-specific/supported-software/i/inline.md +++ b/docs/version-specific/supported-software/i/inline.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # inline Functionality to dynamically define R functions and S4 methods with 'inlined' C, C++ or Fortran code supporting the .C and .Call calling conventions. @@ -7,3 +11,6 @@ Functionality to dynamically define R functions and S4 methods with 'inlined' C version | versionsuffix | toolchain --------|---------------|---------- ``0.3.19`` | ``-R-4.0.4`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/inputproto.md b/docs/version-specific/supported-software/i/inputproto.md index cd97845ce..450303063 100644 --- a/docs/version-specific/supported-software/i/inputproto.md +++ b/docs/version-specific/supported-software/i/inputproto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # inputproto X.org InputProto protocol headers. @@ -10,3 +14,6 @@ version | toolchain ``2.3.1`` | ``gimkl/2.11.5`` ``2.3.1`` | ``intel/2016a`` ``2.3.2`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/intel-compilers.md b/docs/version-specific/supported-software/i/intel-compilers.md index efe459cf4..50fad3ce2 100644 --- a/docs/version-specific/supported-software/i/intel-compilers.md +++ b/docs/version-specific/supported-software/i/intel-compilers.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # intel-compilers Intel C, C++ & Fortran compilers (classic and oneAPI) @@ -19,3 +23,6 @@ version | toolchain ``2023.1.0`` | ``system`` ``2023.2.1`` | ``system`` ``2024.0.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/intel.md b/docs/version-specific/supported-software/i/intel.md index 600044810..c589f6e39 100644 --- a/docs/version-specific/supported-software/i/intel.md +++ b/docs/version-specific/supported-software/i/intel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # intel Intel Cluster Toolkit Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MPI & Intel MKL. @@ -52,3 +56,6 @@ version | versionsuffix | toolchain ``2023.11`` | | ``system`` ``2023a`` | | ``system`` ``2023b`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/intelcuda.md b/docs/version-specific/supported-software/i/intelcuda.md index c516ed9dc..78448064d 100644 --- a/docs/version-specific/supported-software/i/intelcuda.md +++ b/docs/version-specific/supported-software/i/intelcuda.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # intelcuda Intel Cluster Toolkit Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MPI & Intel MKL, with CUDA toolkit @@ -12,3 +16,6 @@ version | toolchain ``2019b`` | ``system`` ``2020a`` | ``system`` ``2020b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/intervaltree-python.md b/docs/version-specific/supported-software/i/intervaltree-python.md index dc5bc3dbf..a8770bce7 100644 --- a/docs/version-specific/supported-software/i/intervaltree-python.md +++ b/docs/version-specific/supported-software/i/intervaltree-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # intervaltree-python A mutable, self-balancing interval tree. Queries may be by point, by range overlap, or by range containment @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``3.1.0`` | | ``GCCcore/11.3.0`` ``3.1.0`` | | ``GCCcore/12.2.0`` ``3.1.0`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/intervaltree.md b/docs/version-specific/supported-software/i/intervaltree.md index 9280e18a6..23502befc 100644 --- a/docs/version-specific/supported-software/i/intervaltree.md +++ b/docs/version-specific/supported-software/i/intervaltree.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # intervaltree An interval tree can be used to efficiently find a set of numeric intervals overlapping or containing another interval. This library provides a basic implementation of an interval tree using C++ templates, allowing the insertion of arbitrary types into the tree. @@ -12,3 +16,6 @@ version | toolchain ``0.1`` | ``GCCcore/11.3.0`` ``0.1`` | ``GCCcore/12.3.0`` ``0.1`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/intltool.md b/docs/version-specific/supported-software/i/intltool.md index 021a58877..74909d178 100644 --- a/docs/version-specific/supported-software/i/intltool.md +++ b/docs/version-specific/supported-software/i/intltool.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # intltool intltool is a set of tools to centralize translation of many different file formats using GNU gettext-compatible PO files. @@ -29,3 +33,6 @@ version | versionsuffix | toolchain ``0.51.0`` | ``-Perl-5.22.1`` | ``intel/2016a`` ``0.51.0`` | ``-Perl-5.24.0`` | ``intel/2016b`` ``0.51.0`` | ``-Perl-5.24.1`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/io_lib.md b/docs/version-specific/supported-software/i/io_lib.md index 1c2ba1999..fb513d414 100644 --- a/docs/version-specific/supported-software/i/io_lib.md +++ b/docs/version-specific/supported-software/i/io_lib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # io_lib Io_lib is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. The programmer simply calls the (eg) read_reading to create a "Read" C structure with the data loaded into memory. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows. @@ -7,3 +11,6 @@ Io_lib is a library of file reading and writing code to provide a general purpos version | toolchain --------|---------- ``1.14.8`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ioapi.md b/docs/version-specific/supported-software/i/ioapi.md index 6a2129b95..9b1179632 100644 --- a/docs/version-specific/supported-software/i/ioapi.md +++ b/docs/version-specific/supported-software/i/ioapi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ioapi The Models-3/EDSS Input/Output Applications Programming Interface (I/O API) provides the environmental model developer with an easy-to-learn, easy-to-use programming library for data storage and access, available from both Fortran and C. The same routines can be used for both file storage (using netCDF files) and model coupling (using PVM mailboxes). It is the standard data access library for both the NCSC/CMAS's EDSS project and EPA's Models-3, CMAQ, and SMOKE, as well as various other atmospheric and hydrological modeling systems. @@ -7,3 +11,6 @@ The Models-3/EDSS Input/Output Applications Programming Interface (I/O API) prov version | versionsuffix | toolchain --------|---------------|---------- ``3.2-2020111`` | ``-nocpl`` | ``gompi/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/iodata.md b/docs/version-specific/supported-software/i/iodata.md index 29be2238f..5f20595a6 100644 --- a/docs/version-specific/supported-software/i/iodata.md +++ b/docs/version-specific/supported-software/i/iodata.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # iodata Python library for reading, writing, and converting computational chemistry file formats and generating input files. @@ -7,3 +11,6 @@ Python library for reading, writing, and converting computational chemistry file version | toolchain --------|---------- ``1.0.0a2`` | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/iomkl.md b/docs/version-specific/supported-software/i/iomkl.md index 7390b2055..dfc5c4233 100644 --- a/docs/version-specific/supported-software/i/iomkl.md +++ b/docs/version-specific/supported-software/i/iomkl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # iomkl Intel Cluster Toolchain Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MKL & OpenMPI. @@ -21,3 +25,6 @@ version | toolchain ``2020b`` | ``system`` ``2021a`` | ``system`` ``2021b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/iompi.md b/docs/version-specific/supported-software/i/iompi.md index a789bbd51..b6164256d 100644 --- a/docs/version-specific/supported-software/i/iompi.md +++ b/docs/version-specific/supported-software/i/iompi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # iompi Toolchain with Intel C, C++ and Fortran compilers, alongside OpenMPI. @@ -21,3 +25,6 @@ version | toolchain ``2020b`` | ``system`` ``2021a`` | ``system`` ``2021b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/iperf.md b/docs/version-specific/supported-software/i/iperf.md index b636cd384..bfd8127b8 100644 --- a/docs/version-specific/supported-software/i/iperf.md +++ b/docs/version-specific/supported-software/i/iperf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # iperf Iperf 2: TCP and UDP bandwidth performance measurement tool @@ -9,3 +13,6 @@ version | toolchain ``2.1.9`` | ``GCCcore/10.2.0`` ``3.15`` | ``system`` ``3.16`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ipp.md b/docs/version-specific/supported-software/i/ipp.md index a5defe00e..7661885aa 100644 --- a/docs/version-specific/supported-software/i/ipp.md +++ b/docs/version-specific/supported-software/i/ipp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ipp Intel Integrated Performance Primitives (Intel IPP) is an extensive library of multicore-ready, highly optimized software functions for multimedia, data processing, and communications applications. Intel IPP offers thousands of optimized functions covering frequently used fundamental algorithms. @@ -10,3 +14,6 @@ version | toolchain ``7.0.5.233`` | ``system`` ``8.1.0.144`` | ``system`` ``9.0.1.150`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ipympl.md b/docs/version-specific/supported-software/i/ipympl.md index f12424e3e..c5742003e 100644 --- a/docs/version-specific/supported-software/i/ipympl.md +++ b/docs/version-specific/supported-software/i/ipympl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ipympl Leveraging the Jupyter interactive widgets framework, ipympl enables the interactive features of matplotlib in the Jupyter notebook and in JupyterLab. Besides, the figure canvas element is a proper Jupyter interactive widget which can be positioned in interactive widget layouts. @@ -9,3 +13,6 @@ version | toolchain ``0.9.3`` | ``foss/2022a`` ``0.9.3`` | ``gfbf/2023a`` ``0.9.4`` | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ipyparallel.md b/docs/version-specific/supported-software/i/ipyparallel.md index 934822584..930fc3e81 100644 --- a/docs/version-specific/supported-software/i/ipyparallel.md +++ b/docs/version-specific/supported-software/i/ipyparallel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ipyparallel ipyparallel is a Python package and collection of CLI scripts for controlling clusters for Jupyter @@ -7,3 +11,6 @@ ipyparallel is a Python package and collection of CLI scripts for controlling c version | versionsuffix | toolchain --------|---------------|---------- ``6.2.2`` | ``-Python-3.6.4`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ipyrad.md b/docs/version-specific/supported-software/i/ipyrad.md index dcf7aab16..9f6331400 100644 --- a/docs/version-specific/supported-software/i/ipyrad.md +++ b/docs/version-specific/supported-software/i/ipyrad.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ipyrad ipyrad is an interactive toolkit for assembly and analysis of restriction-site associated genomic data sets (e.g., RAD, ddRAD, GBS) for population genetic and phylogenetic studies. @@ -7,3 +11,6 @@ ipyrad is an interactive toolkit for assembly and analysis of restriction-site a version | versionsuffix | toolchain --------|---------------|---------- ``0.6.15`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/irodsfs.md b/docs/version-specific/supported-software/i/irodsfs.md index 3d536ebff..d7343bf04 100644 --- a/docs/version-specific/supported-software/i/irodsfs.md +++ b/docs/version-specific/supported-software/i/irodsfs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # irodsfs FUSE implementation of iRODS Client written in Golang. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.8.11`` | ``-linux-amd64`` | ``system`` ``0.8.12`` | ``-linux-amd64`` | ``system`` ``0.8.9`` | ``-linux-amd64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/isoCirc.md b/docs/version-specific/supported-software/i/isoCirc.md index 74864aa41..3424d747e 100644 --- a/docs/version-specific/supported-software/i/isoCirc.md +++ b/docs/version-specific/supported-software/i/isoCirc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # isoCirc isoCirc: computational pipeline to identify high-confidence BSJs and full-length circRNA isoforms from isoCirc long-read data @@ -7,3 +11,6 @@ isoCirc: computational pipeline to identify high-confidence BSJs and full-length version | toolchain --------|---------- ``1.0.4`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/ispc.md b/docs/version-specific/supported-software/i/ispc.md index 59ea2d803..f1114be99 100644 --- a/docs/version-specific/supported-software/i/ispc.md +++ b/docs/version-specific/supported-software/i/ispc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ispc Intel SPMD Program Compilers; An open-source compiler for high-performance SIMD programming on the CPU. ispc is a compiler for a variant of the C programming language, with extensions for 'single program, multiple data' (SPMD) programming. Under the SPMD model, the programmer writes a program that generally appears to be a regular serial program, though the execution model is actually that a number of program instances execute in parallel on the hardware. @@ -10,3 +14,6 @@ version | toolchain ``1.12.0`` | ``system`` ``1.16.0`` | ``system`` ``1.6.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/itac.md b/docs/version-specific/supported-software/i/itac.md index cf210f855..ca0383b7d 100644 --- a/docs/version-specific/supported-software/i/itac.md +++ b/docs/version-specific/supported-software/i/itac.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # itac The Intel Trace Collector is a low-overhead tracing library that performs event-based tracing in applications. The Intel Trace Analyzer provides a convenient way to monitor application activities gathered by the Intel Trace Collector through graphical displays. @@ -18,3 +22,6 @@ version | toolchain ``8.0.0.011`` | ``system`` ``8.1.4.045`` | ``system`` ``9.0.3.051`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/i/itpp.md b/docs/version-specific/supported-software/i/itpp.md index 5b13cb67f..439bcd167 100644 --- a/docs/version-specific/supported-software/i/itpp.md +++ b/docs/version-specific/supported-software/i/itpp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # itpp IT++ is a C++ library of mathematical, signal processing and communication classes and functions. Its main use is in simulation of communication systems and for performing research in the area of communications. @@ -7,3 +11,6 @@ IT++ is a C++ library of mathematical, signal processing and communication clas version | toolchain --------|---------- ``4.3.1`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/index.md b/docs/version-specific/supported-software/index.md index 643bcb651..9bdfd0e0b 100644 --- a/docs/version-specific/supported-software/index.md +++ b/docs/version-specific/supported-software/index.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # List of supported software EasyBuild supports 3552 different software packages (incl. toolchains, bundles): diff --git a/docs/version-specific/supported-software/j/JAGS.md b/docs/version-specific/supported-software/j/JAGS.md index e0dfb43d8..9153bce4a 100644 --- a/docs/version-specific/supported-software/j/JAGS.md +++ b/docs/version-specific/supported-software/j/JAGS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # JAGS JAGS is Just Another Gibbs Sampler. It is a program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) simulation @@ -22,3 +26,6 @@ version | toolchain ``4.3.1`` | ``foss/2022a`` ``4.3.2`` | ``foss/2022b`` ``4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/JAXFrontCE.md b/docs/version-specific/supported-software/j/JAXFrontCE.md index 18b1a19ba..6ceaf4c70 100644 --- a/docs/version-specific/supported-software/j/JAXFrontCE.md +++ b/docs/version-specific/supported-software/j/JAXFrontCE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # JAXFrontCE JAXFront is a technology to generate graphical user interfaces on multiple channels (Java Swing, HTML, PDF) on the basis of an XML schema. @@ -7,3 +11,6 @@ JAXFront is a technology to generate graphical user interfaces on multiple chan version | toolchain --------|---------- ``2.75`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/JSON-GLib.md b/docs/version-specific/supported-software/j/JSON-GLib.md index 781eb3758..ba255b42c 100644 --- a/docs/version-specific/supported-software/j/JSON-GLib.md +++ b/docs/version-specific/supported-software/j/JSON-GLib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # JSON-GLib JSON-GLib implements a full JSON parser and generator using GLib and GObject, and integrates JSON with GLib data types. @@ -7,3 +11,6 @@ JSON-GLib implements a full JSON parser and generator using GLib and GObject, a version | toolchain --------|---------- ``1.6.2`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/JUBE.md b/docs/version-specific/supported-software/j/JUBE.md index 3b66d3ad1..7099be93d 100644 --- a/docs/version-specific/supported-software/j/JUBE.md +++ b/docs/version-specific/supported-software/j/JUBE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # JUBE The JUBE benchmarking environment provides a script based framework to easily create benchmark sets, run those sets on different computer systems and evaluate the results. @@ -12,3 +16,6 @@ version | toolchain ``2.4.0`` | ``system`` ``2.4.1`` | ``system`` ``2.4.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/JUnit.md b/docs/version-specific/supported-software/j/JUnit.md index 0d20d06fa..a735ac14f 100644 --- a/docs/version-specific/supported-software/j/JUnit.md +++ b/docs/version-specific/supported-software/j/JUnit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # JUnit A programmer-oriented testing framework for Java. @@ -24,3 +28,6 @@ version | versionsuffix | toolchain ``4.12`` | ``-Java-1.8.0_77`` | ``system`` ``4.12`` | ``-Java-1.8.0_92`` | ``system`` ``4.12`` | ``-Java-1.8`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/JWM.md b/docs/version-specific/supported-software/j/JWM.md index 712ecd9ae..c8c5ab43d 100644 --- a/docs/version-specific/supported-software/j/JWM.md +++ b/docs/version-specific/supported-software/j/JWM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # JWM JWM is a light-weight window manager for the X11 Window System. @@ -7,3 +11,6 @@ JWM is a light-weight window manager for the X11 Window System. version | toolchain --------|---------- ``2.3.5`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/Jansson.md b/docs/version-specific/supported-software/j/Jansson.md index b391a3b70..c32ba43c8 100644 --- a/docs/version-specific/supported-software/j/Jansson.md +++ b/docs/version-specific/supported-software/j/Jansson.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Jansson Jansson is a C library for encoding, decoding and manipulating JSON data. Its main features and design principles are: * Simple and intuitive API and data model * Comprehensive documentation * No dependencies on other libraries * Full Unicode support (UTF-8) * Extensive test suite @@ -11,3 +15,6 @@ version | toolchain ``2.14`` | ``GCC/11.3.0`` ``2.14`` | ``GCC/12.3.0`` ``2.6`` | ``GCC/4.8.3`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/JasPer.md b/docs/version-specific/supported-software/j/JasPer.md index b8b278c21..fc4312786 100644 --- a/docs/version-specific/supported-software/j/JasPer.md +++ b/docs/version-specific/supported-software/j/JasPer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # JasPer The JasPer Project is an open-source initiative to provide a free software-based reference implementation of the codec specified in the JPEG-2000 Part-1 standard. @@ -32,3 +36,6 @@ version | toolchain ``4.0.0`` | ``GCCcore/12.2.0`` ``4.0.0`` | ``GCCcore/12.3.0`` ``4.0.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/Jasmine.md b/docs/version-specific/supported-software/j/Jasmine.md index 54f254b4a..190608b4c 100644 --- a/docs/version-specific/supported-software/j/Jasmine.md +++ b/docs/version-specific/supported-software/j/Jasmine.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Jasmine SV Merging Across Samples @@ -7,3 +11,6 @@ SV Merging Across Samples version | versionsuffix | toolchain --------|---------------|---------- ``1.1.4`` | ``-Java-15`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/Java.md b/docs/version-specific/supported-software/j/Java.md index 3fa416e99..fd6acb191 100644 --- a/docs/version-specific/supported-software/j/Java.md +++ b/docs/version-specific/supported-software/j/Java.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Java Java Platform, Standard Edition (Java SE) lets you develop and deploy Java applications on desktops and servers. @@ -78,3 +82,6 @@ version | versionsuffix | toolchain ``8.362`` | | ``system`` ``8.402`` | | ``system`` ``8`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/JavaFX.md b/docs/version-specific/supported-software/j/JavaFX.md index 9e6975bc0..4f54b77b4 100644 --- a/docs/version-specific/supported-software/j/JavaFX.md +++ b/docs/version-specific/supported-software/j/JavaFX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # JavaFX OpenJFX is an open source, next generation client application platform for desktop, mobile and embedded systems built on Java @@ -7,3 +11,6 @@ OpenJFX is an open source, next generation client application platform for deskt version | versionsuffix | toolchain --------|---------------|---------- ``11.0.2`` | ``_linux-x64_bin-sdk`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/Jblob.md b/docs/version-specific/supported-software/j/Jblob.md index b7cae7c8e..94252b560 100644 --- a/docs/version-specific/supported-software/j/Jblob.md +++ b/docs/version-specific/supported-software/j/Jblob.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Jblob Jblob - WDC Climate dataset download @@ -7,3 +11,6 @@ Jblob - WDC Climate dataset download version | toolchain --------|---------- ``3.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/Jellyfish.md b/docs/version-specific/supported-software/j/Jellyfish.md index 4a46282e1..9e42895a7 100644 --- a/docs/version-specific/supported-software/j/Jellyfish.md +++ b/docs/version-specific/supported-software/j/Jellyfish.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Jellyfish Jellyfish is a tool for fast, memory-efficient counting of k-mers in DNA. @@ -21,3 +25,6 @@ version | toolchain ``2.3.0`` | ``GCC/12.2.0`` ``2.3.0`` | ``GCC/8.2.0-2.31.1`` ``2.3.0`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/JiTCODE.md b/docs/version-specific/supported-software/j/JiTCODE.md index fefff49b1..33b4c5845 100644 --- a/docs/version-specific/supported-software/j/JiTCODE.md +++ b/docs/version-specific/supported-software/j/JiTCODE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # JiTCODE Just-in-time compilation for ordinary/delay/stochastic differential equations (DDEs) @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.3.2`` | ``-Python-3.6.4`` | ``intel/2018a`` ``1.4.0`` | ``-Python-3.7.2`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/Jmol.md b/docs/version-specific/supported-software/j/Jmol.md index f26c738ac..c598612fc 100644 --- a/docs/version-specific/supported-software/j/Jmol.md +++ b/docs/version-specific/supported-software/j/Jmol.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Jmol Jmol: an open-source Java viewer for chemical structures in 3D @@ -7,3 +11,6 @@ Jmol: an open-source Java viewer for chemical structures in 3D version | versionsuffix | toolchain --------|---------------|---------- ``16.1.41`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/Jorg.md b/docs/version-specific/supported-software/j/Jorg.md index 43473dba3..670372f5c 100644 --- a/docs/version-specific/supported-software/j/Jorg.md +++ b/docs/version-specific/supported-software/j/Jorg.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Jorg A MAG Circularization Method By Lauren Lui, Torben Nielsen, and Adam Arkin @@ -7,3 +11,6 @@ A MAG Circularization Method By Lauren Lui, Torben Nielsen, and Adam Arkin version | toolchain --------|---------- ``1.0.1`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/JsonCpp.md b/docs/version-specific/supported-software/j/JsonCpp.md index 52f780b91..86bf985c8 100644 --- a/docs/version-specific/supported-software/j/JsonCpp.md +++ b/docs/version-specific/supported-software/j/JsonCpp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # JsonCpp JsonCpp is a C++ library that allows manipulating JSON values, including serialization and deserialization to and from strings. It can also preserve existing comment in unserialization/serialization steps, making it a convenient format to store user input files. @@ -15,3 +19,6 @@ version | toolchain ``1.9.5`` | ``GCCcore/11.3.0`` ``1.9.5`` | ``GCCcore/12.2.0`` ``1.9.5`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/Judy.md b/docs/version-specific/supported-software/j/Judy.md index 49e9a8501..9e1729309 100644 --- a/docs/version-specific/supported-software/j/Judy.md +++ b/docs/version-specific/supported-software/j/Judy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Judy A C library that implements a dynamic array. @@ -13,3 +17,6 @@ version | toolchain ``1.0.5`` | ``GCCcore/12.2.0`` ``1.0.5`` | ``GCCcore/8.2.0`` ``1.0.5`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/Julia.md b/docs/version-specific/supported-software/j/Julia.md index aefe5260f..eb0923138 100644 --- a/docs/version-specific/supported-software/j/Julia.md +++ b/docs/version-specific/supported-software/j/Julia.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Julia Julia is a high-level, high-performance dynamic programming language for numerical computing @@ -32,3 +36,6 @@ version | versionsuffix | toolchain ``1.9.0`` | ``-linux-x86_64`` | ``system`` ``1.9.2`` | ``-linux-x86_64`` | ``system`` ``1.9.3`` | ``-linux-x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/Jupyter-bundle.md b/docs/version-specific/supported-software/j/Jupyter-bundle.md index 9c6fbe80f..97e19e7d4 100644 --- a/docs/version-specific/supported-software/j/Jupyter-bundle.md +++ b/docs/version-specific/supported-software/j/Jupyter-bundle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Jupyter-bundle This bundle collects a range of Jupyter interfaces (Lab, Notebook and nbclassic), extensions (Jupyter Server Proxy, Jupyter Resource Monitor, Jupyter Lmod) and the JupyterHub. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20230823`` | ``GCCcore/12.3.0`` ``20240522`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/JupyterHub.md b/docs/version-specific/supported-software/j/JupyterHub.md index 232b820fb..d4c45eccd 100644 --- a/docs/version-specific/supported-software/j/JupyterHub.md +++ b/docs/version-specific/supported-software/j/JupyterHub.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # JupyterHub JupyterHub is a multiuser version of the Jupyter (IPython) notebook designed for centralized deployments in companies, university classrooms and research labs. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``4.0.1`` | | ``GCCcore/12.2.0`` ``4.0.2`` | | ``GCCcore/12.3.0`` ``4.1.5`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/JupyterLab.md b/docs/version-specific/supported-software/j/JupyterLab.md index 3bcb39d8c..0d2f3a79f 100644 --- a/docs/version-specific/supported-software/j/JupyterLab.md +++ b/docs/version-specific/supported-software/j/JupyterLab.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # JupyterLab JupyterLab is the next-generation user interface for Project Jupyter offering all the familiar building blocks of the classic Jupyter Notebook (notebook, terminal, text editor, file browser, rich outputs, etc.) in a flexible and powerful user interface. JupyterLab will eventually replace the classic Jupyter Notebook. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``4.0.3`` | | ``GCCcore/12.2.0`` ``4.0.5`` | | ``GCCcore/12.3.0`` ``4.2.0`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/JupyterNotebook.md b/docs/version-specific/supported-software/j/JupyterNotebook.md index 952adc070..d6c4700e6 100644 --- a/docs/version-specific/supported-software/j/JupyterNotebook.md +++ b/docs/version-specific/supported-software/j/JupyterNotebook.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # JupyterNotebook The Jupyter Notebook is the original web application for creating and sharing computational documents. It offers a simple, streamlined, document-centric experience. @@ -9,3 +13,6 @@ version | toolchain ``7.0.2`` | ``GCCcore/12.3.0`` ``7.0.3`` | ``GCCcore/12.2.0`` ``7.2.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/index.md b/docs/version-specific/supported-software/j/index.md index fcfbcbff1..5691e8d23 100644 --- a/docs/version-specific/supported-software/j/index.md +++ b/docs/version-specific/supported-software/j/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (j) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - *j* - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [JAGS](JAGS.md) * [Jansson](Jansson.md) * [Jasmine](Jasmine.md) diff --git a/docs/version-specific/supported-software/j/jModelTest.md b/docs/version-specific/supported-software/j/jModelTest.md index a352dd762..a79fc901b 100644 --- a/docs/version-specific/supported-software/j/jModelTest.md +++ b/docs/version-specific/supported-software/j/jModelTest.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jModelTest jModelTest is a tool to carry out statistical selection of best-fit models of nucleotide substitution. @@ -7,3 +11,6 @@ jModelTest is a tool to carry out statistical selection of best-fit models of nu version | versionsuffix | toolchain --------|---------------|---------- ``2.1.10r20160303`` | ``-Java-1.8.0_92`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jax.md b/docs/version-specific/supported-software/j/jax.md index 72221a060..61d264099 100644 --- a/docs/version-specific/supported-software/j/jax.md +++ b/docs/version-specific/supported-software/j/jax.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jax Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``0.3.9`` | | ``foss/2021a`` ``0.4.4`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.4.4`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jbigkit.md b/docs/version-specific/supported-software/j/jbigkit.md index 078892158..1bdbea09e 100644 --- a/docs/version-specific/supported-software/j/jbigkit.md +++ b/docs/version-specific/supported-software/j/jbigkit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jbigkit JBIG-KIT is a software implementation of the JBIG1 data compression standard (ITU-T T.82), which was designed for bi-level image data, such as scanned documents. @@ -18,3 +22,6 @@ version | toolchain ``2.1`` | ``GCCcore/8.2.0`` ``2.1`` | ``GCCcore/8.3.0`` ``2.1`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jedi-language-server.md b/docs/version-specific/supported-software/j/jedi-language-server.md index 7b951625d..2434a58e2 100644 --- a/docs/version-specific/supported-software/j/jedi-language-server.md +++ b/docs/version-specific/supported-software/j/jedi-language-server.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jedi-language-server A Python Language Server powered by Jedi. @@ -7,3 +11,6 @@ A Python Language Server powered by Jedi. version | toolchain --------|---------- ``0.39.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jedi.md b/docs/version-specific/supported-software/j/jedi.md index 0838afdd6..b951539ca 100644 --- a/docs/version-specific/supported-software/j/jedi.md +++ b/docs/version-specific/supported-software/j/jedi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jedi Jedi is a static analysis tool for Python that is typically used in IDEs/editors plugins. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.18.1`` | ``GCCcore/11.3.0`` ``0.19.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jemalloc.md b/docs/version-specific/supported-software/j/jemalloc.md index ccbd40ee7..04682837c 100644 --- a/docs/version-specific/supported-software/j/jemalloc.md +++ b/docs/version-specific/supported-software/j/jemalloc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jemalloc jemalloc is a general purpose malloc(3) implementation that emphasizes fragmentation avoidance and scalable concurrency support. @@ -23,3 +27,6 @@ version | toolchain ``5.3.0`` | ``GCCcore/11.3.0`` ``5.3.0`` | ``GCCcore/12.2.0`` ``5.3.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jhbuild.md b/docs/version-specific/supported-software/j/jhbuild.md index 61562aae1..7332febf4 100644 --- a/docs/version-specific/supported-software/j/jhbuild.md +++ b/docs/version-specific/supported-software/j/jhbuild.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jhbuild JHBuild allows you to automatically download and compile “modules” (i.e. source code packages). Modules are listed in “module set” files, which also include dependency information so that JHBuild can discover what modules need to be built and in what order. @@ -7,3 +11,6 @@ JHBuild allows you to automatically download and compile “modules” (i.e. sou version | toolchain --------|---------- ``3.15.92`` | ``GCCcore/4.9.3`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jiter.md b/docs/version-specific/supported-software/j/jiter.md index 514a1c97d..aaac04ebc 100644 --- a/docs/version-specific/supported-software/j/jiter.md +++ b/docs/version-specific/supported-software/j/jiter.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jiter Fast iterable JSON parser @@ -7,3 +11,6 @@ Fast iterable JSON parser version | toolchain --------|---------- ``0.4.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/joypy.md b/docs/version-specific/supported-software/j/joypy.md index 6de4af39f..c5c5de8ba 100644 --- a/docs/version-specific/supported-software/j/joypy.md +++ b/docs/version-specific/supported-software/j/joypy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # joypy Joyplots in Python with matplotlib & pandas @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.2.2`` | ``-Python-3.7.4`` | ``intel/2019b`` ``0.2.4`` | | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jq.md b/docs/version-specific/supported-software/j/jq.md index 4b743aa0b..0bb85e591 100644 --- a/docs/version-specific/supported-software/j/jq.md +++ b/docs/version-specific/supported-software/j/jq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jq jq is a lightweight and flexible command-line JSON processor. @@ -12,3 +16,6 @@ version | toolchain ``1.6`` | ``GCCcore/11.3.0`` ``1.6`` | ``GCCcore/12.2.0`` ``1.6`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/json-c.md b/docs/version-specific/supported-software/j/json-c.md index 5ebe8c760..d4cdd802f 100644 --- a/docs/version-specific/supported-software/j/json-c.md +++ b/docs/version-specific/supported-software/j/json-c.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # json-c JSON-C implements a reference counting object model that allows you to easily construct JSON objects in C, output them as JSON formatted strings and parse JSON formatted strings back into the C representation of JSON objects. @@ -13,3 +17,6 @@ version | toolchain ``0.16`` | ``GCCcore/12.2.0`` ``0.16`` | ``GCCcore/12.3.0`` ``0.17`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/json-fortran.md b/docs/version-specific/supported-software/j/json-fortran.md index 85fe14612..af59aa7c1 100644 --- a/docs/version-specific/supported-software/j/json-fortran.md +++ b/docs/version-specific/supported-software/j/json-fortran.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # json-fortran JSON-Fortran: A Modern Fortran JSON API @@ -15,3 +19,6 @@ version | toolchain ``8.3.0`` | ``intel-compilers/2022.0.1`` ``8.3.0`` | ``intel-compilers/2022.1.0`` ``8.3.0`` | ``intel-compilers/2022.2.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jupyter-contrib-nbextensions.md b/docs/version-specific/supported-software/j/jupyter-contrib-nbextensions.md index 738529a46..6ac1bcb67 100644 --- a/docs/version-specific/supported-software/j/jupyter-contrib-nbextensions.md +++ b/docs/version-specific/supported-software/j/jupyter-contrib-nbextensions.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jupyter-contrib-nbextensions A collection of various notebook extensions for Jupyter @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.7.0`` | ``GCCcore/11.3.0`` ``0.7.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jupyter-matlab-proxy.md b/docs/version-specific/supported-software/j/jupyter-matlab-proxy.md index c414f38fd..70e9f2a5c 100644 --- a/docs/version-specific/supported-software/j/jupyter-matlab-proxy.md +++ b/docs/version-specific/supported-software/j/jupyter-matlab-proxy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jupyter-matlab-proxy MATLAB Integration for Jupyter @@ -9,3 +13,6 @@ version | toolchain ``0.12.2`` | ``GCCcore/12.3.0`` ``0.3.4`` | ``GCCcore/10.3.0`` ``0.5.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jupyter-resource-usage.md b/docs/version-specific/supported-software/j/jupyter-resource-usage.md index bc01b97f6..a4f14a694 100644 --- a/docs/version-specific/supported-software/j/jupyter-resource-usage.md +++ b/docs/version-specific/supported-software/j/jupyter-resource-usage.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jupyter-resource-usage Jupyter Notebook Extension for monitoring your own Resource Usage (memory and/or CPU) @@ -11,3 +15,6 @@ version | toolchain ``0.6.3`` | ``GCCcore/11.3.0`` ``1.0.0`` | ``GCCcore/12.3.0`` ``1.0.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jupyter-rsession-proxy.md b/docs/version-specific/supported-software/j/jupyter-rsession-proxy.md index 72f84d7f9..ca3e7802d 100644 --- a/docs/version-specific/supported-software/j/jupyter-rsession-proxy.md +++ b/docs/version-specific/supported-software/j/jupyter-rsession-proxy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jupyter-rsession-proxy Jupyter extensions for running an RStudio rsession proxy @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.1.0`` | ``GCCcore/11.3.0`` ``2.2.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jupyter-server-proxy.md b/docs/version-specific/supported-software/j/jupyter-server-proxy.md index 94cfb8977..b841d2cc3 100644 --- a/docs/version-specific/supported-software/j/jupyter-server-proxy.md +++ b/docs/version-specific/supported-software/j/jupyter-server-proxy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jupyter-server-proxy Jupyter Server Proxy lets you run arbitrary external processes (such as RStudio, Shiny Server, Syncthing, PostgreSQL, Code Server, etc) alongside your notebook server and provide authenticated web access to them using a path like /rstudio next to others like /lab. Alongside the python package that provides the main functionality, the JupyterLab extension (@jupyterlab/server-proxy) provides buttons in the JupyterLab launcher window to get to RStudio for example. @@ -11,3 +15,6 @@ version | toolchain ``3.2.2`` | ``GCCcore/12.2.0`` ``4.0.0`` | ``GCCcore/12.3.0`` ``4.1.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jupyter-server.md b/docs/version-specific/supported-software/j/jupyter-server.md index 7767db6a7..33c1b22b8 100644 --- a/docs/version-specific/supported-software/j/jupyter-server.md +++ b/docs/version-specific/supported-software/j/jupyter-server.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jupyter-server The Jupyter Server provides the backend (i.e. the core services, APIs, and REST endpoints) for Jupyter web applications like Jupyter notebook, JupyterLab, and Voila. @@ -10,3 +14,6 @@ version | toolchain ``2.14.0`` | ``GCCcore/13.2.0`` ``2.7.0`` | ``GCCcore/12.2.0`` ``2.7.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jupyterlab-lmod.md b/docs/version-specific/supported-software/j/jupyterlab-lmod.md index c63ce7303..39ee8ac2c 100644 --- a/docs/version-specific/supported-software/j/jupyterlab-lmod.md +++ b/docs/version-specific/supported-software/j/jupyterlab-lmod.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jupyterlab-lmod JupyterLab extension that allows user to interact with environment modules before launching kernels. The extension use Lmod's Python interface to accomplish module related task like loading, unloading, saving collection, etc. @@ -7,3 +11,6 @@ JupyterLab extension that allows user to interact with environment modules befor version | toolchain --------|---------- ``1.0.2`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jupyterlmod.md b/docs/version-specific/supported-software/j/jupyterlmod.md index fc9d2aaba..9f70f85e9 100644 --- a/docs/version-specific/supported-software/j/jupyterlmod.md +++ b/docs/version-specific/supported-software/j/jupyterlmod.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jupyterlmod Jupyter interactive notebook server extension that allows user to interact with environment modules before launching kernels. The extension use Lmod's Python interface to accomplish module related task like loading, unloading, saving collection, etc. @@ -9,3 +13,6 @@ version | toolchain ``3.0.0`` | ``GCCcore/11.3.0`` ``4.0.3`` | ``GCCcore/11.3.0`` ``4.0.3`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/j/jxrlib.md b/docs/version-specific/supported-software/j/jxrlib.md index e008fdc1c..9d54e150f 100644 --- a/docs/version-specific/supported-software/j/jxrlib.md +++ b/docs/version-specific/supported-software/j/jxrlib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # jxrlib Open source implementation of jpegxr @@ -10,3 +14,6 @@ version | toolchain ``1.1`` | ``GCCcore/10.3.0`` ``1.1`` | ``GCCcore/11.3.0`` ``1.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/KAT.md b/docs/version-specific/supported-software/k/KAT.md index cb7fa8ba3..f1945b1c8 100644 --- a/docs/version-specific/supported-software/k/KAT.md +++ b/docs/version-specific/supported-software/k/KAT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # KAT The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.4.2`` | ``-Python-3.6.4`` | ``foss/2018a`` ``2.4.2`` | ``-Python-3.7.2`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/KITE.md b/docs/version-specific/supported-software/k/KITE.md index 630a9b534..0b4c4ad65 100644 --- a/docs/version-specific/supported-software/k/KITE.md +++ b/docs/version-specific/supported-software/k/KITE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # KITE KITE is an open-source Python/C++ software suite for efficient real-space tight-binding (TB) simulations of electronic structure and bulk quantum transport properties of disordered systems scalable to multi billions of atomic orbitals. @@ -7,3 +11,6 @@ KITE is an open-source Python/C++ software suite for efficient real-space tight- version | toolchain --------|---------- ``1.1`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/KMC.md b/docs/version-specific/supported-software/k/KMC.md index 4aaacd42b..42b4010c5 100644 --- a/docs/version-specific/supported-software/k/KMC.md +++ b/docs/version-specific/supported-software/k/KMC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # KMC KMC is a disk-based programm for counting k-mers from (possibly gzipped) FASTQ/FASTA files. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``3.2.1`` | ``-Python-2.7.18`` | ``GCC/11.2.0`` ``3.2.1`` | | ``GCC/11.2.0`` ``3.2.2`` | | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/KMCP.md b/docs/version-specific/supported-software/k/KMCP.md index fee9070f5..c29a54d2d 100644 --- a/docs/version-specific/supported-software/k/KMCP.md +++ b/docs/version-specific/supported-software/k/KMCP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # KMCP KMCP: accurate metagenomic profiling of both prokaryotic and viral populations by pseudo-mapping @@ -7,3 +11,6 @@ KMCP: accurate metagenomic profiling of both prokaryotic and viral populations b version | toolchain --------|---------- ``0.9.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/KNIME.md b/docs/version-specific/supported-software/k/KNIME.md index 703fc4658..e20629095 100644 --- a/docs/version-specific/supported-software/k/KNIME.md +++ b/docs/version-specific/supported-software/k/KNIME.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # KNIME KNIME Analytics Platform is the open source software for creating data science applications and services. KNIME stands for KoNstanz Information MinEr. @@ -7,3 +11,6 @@ KNIME Analytics Platform is the open source software for creating data science a version | toolchain --------|---------- ``3.6.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/KWIML.md b/docs/version-specific/supported-software/k/KWIML.md index e49b4f06a..35f022f1e 100644 --- a/docs/version-specific/supported-software/k/KWIML.md +++ b/docs/version-specific/supported-software/k/KWIML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # KWIML The Kitware Information Macro Library @@ -7,3 +11,6 @@ The Kitware Information Macro Library version | toolchain --------|---------- ``20180201`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/KaHIP.md b/docs/version-specific/supported-software/k/KaHIP.md index 929cf247a..80387dabf 100644 --- a/docs/version-specific/supported-software/k/KaHIP.md +++ b/docs/version-specific/supported-software/k/KaHIP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # KaHIP The graph partitioning framework KaHIP -- Karlsruhe High Quality Partitioning. @@ -9,3 +13,6 @@ version | toolchain ``3.14`` | ``gompi/2022a`` ``3.14`` | ``gompi/2022b`` ``3.16`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/Kaiju.md b/docs/version-specific/supported-software/k/Kaiju.md index 1369233aa..0bbaca41d 100644 --- a/docs/version-specific/supported-software/k/Kaiju.md +++ b/docs/version-specific/supported-software/k/Kaiju.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Kaiju Kaiju is a program for sensitive taxonomic classification of high-throughput sequencing reads from metagenomic whole genome sequencing experiments @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.5.0`` | | ``intel/2016b`` ``1.7.2`` | ``-Python-3.7.2`` | ``iimpi/2019a`` ``1.7.3`` | ``-Python-3.7.4`` | ``gompi/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/Kaleido.md b/docs/version-specific/supported-software/k/Kaleido.md index 97b659d93..9251c2cef 100644 --- a/docs/version-specific/supported-software/k/Kaleido.md +++ b/docs/version-specific/supported-software/k/Kaleido.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Kaleido Fast static image export for web-based visualization libraries with zero dependencies @@ -11,3 +15,6 @@ version | toolchain ``0.2.1`` | ``GCCcore/11.3.0`` ``0.2.1`` | ``GCCcore/12.2.0`` ``0.2.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/Kalign.md b/docs/version-specific/supported-software/k/Kalign.md index 9041da7cc..6f9324604 100644 --- a/docs/version-specific/supported-software/k/Kalign.md +++ b/docs/version-specific/supported-software/k/Kalign.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Kalign Kalign is a fast multiple sequence alignment program for biological sequences. @@ -12,3 +16,6 @@ version | toolchain ``3.3.2`` | ``GCCcore/11.2.0`` ``3.3.5`` | ``GCCcore/11.3.0`` ``3.4.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/Kent_tools.md b/docs/version-specific/supported-software/k/Kent_tools.md index 514b2d055..f53fa1245 100644 --- a/docs/version-specific/supported-software/k/Kent_tools.md +++ b/docs/version-specific/supported-software/k/Kent_tools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Kent_tools Kent tools: collection of tools used by the UCSC genome browser. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``422`` | | ``GCC/11.2.0`` ``442`` | | ``GCC/11.3.0`` ``457`` | | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/Keras.md b/docs/version-specific/supported-software/k/Keras.md index 94caf43c9..72a526527 100644 --- a/docs/version-specific/supported-software/k/Keras.md +++ b/docs/version-specific/supported-software/k/Keras.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Keras Keras is a minimalist, highly modular neural networks library, written in Python and capable of running on top of either TensorFlow or Theano. @@ -33,3 +37,6 @@ version | versionsuffix | toolchain ``2.4.3`` | | ``foss/2020b`` ``2.4.3`` | ``-TensorFlow-2.5.0`` | ``fosscuda/2020b`` ``2.4.3`` | | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/KerasTuner.md b/docs/version-specific/supported-software/k/KerasTuner.md index 88de923fa..cda700b92 100644 --- a/docs/version-specific/supported-software/k/KerasTuner.md +++ b/docs/version-specific/supported-software/k/KerasTuner.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # KerasTuner KerasTuner is an easy-to-use, scalable hyperparameter optimization framework that solves the pain points of hyperparameter search. @@ -7,3 +11,6 @@ KerasTuner is an easy-to-use, scalable hyperparameter optimization framework tha version | toolchain --------|---------- ``1.3.5`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/KmerGenie.md b/docs/version-specific/supported-software/k/KmerGenie.md index 1b789eb7b..5d24551aa 100644 --- a/docs/version-specific/supported-software/k/KmerGenie.md +++ b/docs/version-specific/supported-software/k/KmerGenie.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # KmerGenie KmerGenie estimates the best k-mer length for genome de novo assembly. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.7044`` | ``intel/2017a`` ``1.7048`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/Kraken.md b/docs/version-specific/supported-software/k/Kraken.md index 1e622022a..5880bac27 100644 --- a/docs/version-specific/supported-software/k/Kraken.md +++ b/docs/version-specific/supported-software/k/Kraken.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Kraken Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies. Previous attempts by other bioinformatics software to accomplish this task have often used sequence alignment or machine learning techniques that were quite slow, leading to the development of less sensitive but much faster abundance estimation programs. Kraken aims to achieve high sensitivity and high speed by utilizing exact alignments of k-mers and a novel classification algorithm. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``1.1.1`` | | ``GCCcore/11.3.0`` ``1.1.1`` | ``-Perl-5.28.1`` | ``GCCcore/8.2.0`` ``1.1.1`` | | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/Kraken2.md b/docs/version-specific/supported-software/k/Kraken2.md index d5becb9b8..79ca806e4 100644 --- a/docs/version-specific/supported-software/k/Kraken2.md +++ b/docs/version-specific/supported-software/k/Kraken2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Kraken2 Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies. Previous attempts by other bioinformatics software to accomplish this task have often used sequence alignment or machine learning techniques that were quite slow, leading to the development of less sensitive but much faster abundance estimation programs. Kraken aims to achieve high sensitivity and high speed by utilizing exact alignments of k-mers and a novel classification algorithm. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``2.1.2`` | | ``gompi/2021a`` ``2.1.2`` | | ``gompi/2021b`` ``2.1.2`` | | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/KrakenUniq.md b/docs/version-specific/supported-software/k/KrakenUniq.md index f0a0e9951..f9966691d 100644 --- a/docs/version-specific/supported-software/k/KrakenUniq.md +++ b/docs/version-specific/supported-software/k/KrakenUniq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # KrakenUniq KrakenUniq: confident and fast metagenomics classification using unique k-mer counts @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.3`` | ``GCC/11.3.0`` ``1.0.4`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/Kratos.md b/docs/version-specific/supported-software/k/Kratos.md index 02c4e34fb..637aa23ad 100644 --- a/docs/version-specific/supported-software/k/Kratos.md +++ b/docs/version-specific/supported-software/k/Kratos.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Kratos Kratos Multiphysics (A.K.A Kratos) is a framework for building parallel multi-disciplinary simulation software. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``6.0`` | ``-Python-3.6.4`` | ``foss/2018a`` ``6.0`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/KronaTools.md b/docs/version-specific/supported-software/k/KronaTools.md index 7a399554d..84fdc0eb4 100644 --- a/docs/version-specific/supported-software/k/KronaTools.md +++ b/docs/version-specific/supported-software/k/KronaTools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # KronaTools Krona Tools is a set of scripts to create Krona charts from several Bioinformatics tools as well as from text and XML files. @@ -14,3 +18,6 @@ version | toolchain ``2.8.1`` | ``GCCcore/11.3.0`` ``2.8.1`` | ``GCCcore/12.2.0`` ``2.8.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/KyotoCabinet.md b/docs/version-specific/supported-software/k/KyotoCabinet.md index bbc6333b3..ae4077363 100644 --- a/docs/version-specific/supported-software/k/KyotoCabinet.md +++ b/docs/version-specific/supported-software/k/KyotoCabinet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # KyotoCabinet Kyoto Cabinet is a library of routines for managing a database. @@ -9,3 +13,6 @@ version | toolchain ``1.2.77`` | ``GCCcore/7.3.0`` ``1.2.77`` | ``GCCcore/8.2.0`` ``1.2.80`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/index.md b/docs/version-specific/supported-software/k/index.md index bf475f119..4b7e0783d 100644 --- a/docs/version-specific/supported-software/k/index.md +++ b/docs/version-specific/supported-software/k/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (k) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - *k* - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [KaHIP](KaHIP.md) * [Kaiju](Kaiju.md) * [Kaleido](Kaleido.md) diff --git a/docs/version-specific/supported-software/k/kWIP.md b/docs/version-specific/supported-software/k/kWIP.md index 3201fe717..80a8e042a 100644 --- a/docs/version-specific/supported-software/k/kWIP.md +++ b/docs/version-specific/supported-software/k/kWIP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # kWIP This software implements a de novo, alignment free measure of sample genetic dissimilarity which operates upon raw sequencing reads. It is able to calculate the genetic dissimilarity between samples without any reference genome, and without assembling one. @@ -7,3 +11,6 @@ This software implements a de novo, alignment free measure of sample genetic di version | toolchain --------|---------- ``0.2.0`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/kallisto.md b/docs/version-specific/supported-software/k/kallisto.md index ddadef144..ae541a9ff 100644 --- a/docs/version-specific/supported-software/k/kallisto.md +++ b/docs/version-specific/supported-software/k/kallisto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # kallisto kallisto is a program for quantifying abundances of transcripts from RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads. @@ -24,3 +28,6 @@ version | toolchain ``0.48.0`` | ``gompi/2021b`` ``0.48.0`` | ``gompi/2022a`` ``0.50.1`` | ``gompi/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/kb-python.md b/docs/version-specific/supported-software/k/kb-python.md index 516cafccf..55d66ae31 100644 --- a/docs/version-specific/supported-software/k/kb-python.md +++ b/docs/version-specific/supported-software/k/kb-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # kb-python kallisto | bustools is a workflow for pre-processing single-cell RNA-seq data. Pre-processing single-cell RNA-seq involves: (1) association of reads with their cells of origin, (2) collapsing of reads according to unique molecular identifiers (UMIs), and (3) generation of gene or feature counts from the reads to generate a cell x gene matrix. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.27.3`` | ``foss/2021b`` ``0.27.3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/kbproto.md b/docs/version-specific/supported-software/k/kbproto.md index 9a8f23d1d..cc5af7407 100644 --- a/docs/version-specific/supported-software/k/kbproto.md +++ b/docs/version-specific/supported-software/k/kbproto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # kbproto X.org KBProto protocol headers. @@ -10,3 +14,6 @@ version | toolchain ``1.0.7`` | ``gimkl/2.11.5`` ``1.0.7`` | ``intel/2016a`` ``1.0.7`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/kedro.md b/docs/version-specific/supported-software/k/kedro.md index 030ec1814..706a88cc6 100644 --- a/docs/version-specific/supported-software/k/kedro.md +++ b/docs/version-specific/supported-software/k/kedro.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # kedro Kedro is an open-source Python framework that applies software engineering best-practice to data and machine-learning pipelines. @@ -7,3 +11,6 @@ Kedro is an open-source Python framework that applies software engineering best- version | versionsuffix | toolchain --------|---------------|---------- ``0.16.5`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/khmer.md b/docs/version-specific/supported-software/k/khmer.md index cbb706036..6993056c3 100644 --- a/docs/version-specific/supported-software/k/khmer.md +++ b/docs/version-specific/supported-software/k/khmer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # khmer In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.4.1`` | ``-Python-2.7.12`` | ``foss/2016b`` ``2.1.1`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/kim-api.md b/docs/version-specific/supported-software/k/kim-api.md index d652c2eeb..56683ff44 100644 --- a/docs/version-specific/supported-software/k/kim-api.md +++ b/docs/version-specific/supported-software/k/kim-api.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # kim-api Open Knowledgebase of Interatomic Models. KIM is an API and OpenKIM is a collection of interatomic models (potentials) for atomistic simulations. This is a library that can be used by simulation programs to get access to the models in the OpenKIM database. This EasyBuild only installs the API, the models can be installed with the package openkim-models, or the user can install them manually by running kim-api-collections-management install user MODELNAME or kim-api-collections-management install user OpenKIM to install them all. @@ -20,3 +24,6 @@ version | toolchain ``2.3.0`` | ``GCC/12.2.0`` ``2.3.0`` | ``GCC/12.3.0`` ``2.3.0`` | ``intel-compilers/2023.1.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/kineto.md b/docs/version-specific/supported-software/k/kineto.md index 72ec930b6..04f22f2ce 100644 --- a/docs/version-specific/supported-software/k/kineto.md +++ b/docs/version-specific/supported-software/k/kineto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # kineto A CPU+GPU Profiling library that provides access to timeline traces and hardware performance counters @@ -7,3 +11,6 @@ A CPU+GPU Profiling library that provides access to timeline traces and hardware version | toolchain --------|---------- ``0.4.0`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/king.md b/docs/version-specific/supported-software/k/king.md index 24c43fbd2..20a82f76c 100644 --- a/docs/version-specific/supported-software/k/king.md +++ b/docs/version-specific/supported-software/k/king.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # king KING is a toolset that makes use of high-throughput SNP data typically seen in a genome-wide association study (GWAS) or a sequencing project. Applications of KING include family relationship inference and pedigree error checking, quality control, population substructure identification, forensics, gene mapping, etc. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.2.4`` | ``system`` ``2.2.7`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/kma.md b/docs/version-specific/supported-software/k/kma.md index 60f13a5ad..0ec55ce8e 100644 --- a/docs/version-specific/supported-software/k/kma.md +++ b/docs/version-specific/supported-software/k/kma.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # kma KMA is a mapping method designed to map raw reads directly against redundant databases, in an ultra-fast manner using seed and extend. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.2.22`` | ``intel/2019b`` ``1.4.12a`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/kneaddata.md b/docs/version-specific/supported-software/k/kneaddata.md index 337b9f4ff..c3a90a12b 100644 --- a/docs/version-specific/supported-software/k/kneaddata.md +++ b/docs/version-specific/supported-software/k/kneaddata.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # kneaddata KneadData is a tool designed to perform quality control on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments. @@ -7,3 +11,6 @@ KneadData is a tool designed to perform quality control on metagenomic and metat version | toolchain --------|---------- ``0.12.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/kpcalg.md b/docs/version-specific/supported-software/k/kpcalg.md index 3c0504bcc..808ea2327 100644 --- a/docs/version-specific/supported-software/k/kpcalg.md +++ b/docs/version-specific/supported-software/k/kpcalg.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # kpcalg Kernel PC (kPC) algorithm for causal structure learning and causal inference using graphical models. kPC is a version of PC algorithm that uses kernel based independence criteria in order to be able to deal with non-linear relationships and non-Gaussian noise. Includes pcalg: Functions for causal structure learning and causal inference using graphical models. @@ -7,3 +11,6 @@ Kernel PC (kPC) algorithm for causal structure learning and causal inference us version | versionsuffix | toolchain --------|---------------|---------- ``1.0.1`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/krbalancing.md b/docs/version-specific/supported-software/k/krbalancing.md index 1252da8e5..19ebe04f5 100644 --- a/docs/version-specific/supported-software/k/krbalancing.md +++ b/docs/version-specific/supported-software/k/krbalancing.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # krbalancing A C++ extension for Python which computes K.R. balanced matrices. @@ -7,3 +11,6 @@ A C++ extension for Python which computes K.R. balanced matrices. version | toolchain --------|---------- ``0.5.0b0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/k/kwant.md b/docs/version-specific/supported-software/k/kwant.md index a4e7be9d2..7979b3959 100644 --- a/docs/version-specific/supported-software/k/kwant.md +++ b/docs/version-specific/supported-software/k/kwant.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # kwant Kwant is a free (open source), powerful, and easy to use Python package for numerical calculations on tight-binding models with a strong focus on quantum transport. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.4.1`` | ``-Python-3.7.2`` | ``foss/2019a`` ``1.4.1`` | ``-Python-3.7.2`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LADR.md b/docs/version-specific/supported-software/l/LADR.md index 7cba9075a..41a9d719e 100644 --- a/docs/version-specific/supported-software/l/LADR.md +++ b/docs/version-specific/supported-software/l/LADR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LADR Prover9, Mace4, and several related programs come packaged in a system called LADR (Library for Automated Deduction Research). @@ -7,3 +11,6 @@ Prover9, Mace4, and several related programs come packaged in a system called L version | toolchain --------|---------- ``2009-11A`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LAME.md b/docs/version-specific/supported-software/l/LAME.md index 0c0c8ef1b..c6957d7fc 100644 --- a/docs/version-specific/supported-software/l/LAME.md +++ b/docs/version-specific/supported-software/l/LAME.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LAME LAME is a high quality MPEG Audio Layer III (MP3) encoder licensed under the LGPL. @@ -21,3 +25,6 @@ version | toolchain ``3.100`` | ``intel/2017b`` ``3.99.5`` | ``foss/2016b`` ``3.99.5`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LAMMPS.md b/docs/version-specific/supported-software/l/LAMMPS.md index 8852188b0..80267d3ba 100644 --- a/docs/version-specific/supported-software/l/LAMMPS.md +++ b/docs/version-specific/supported-software/l/LAMMPS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LAMMPS LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. LAMMPS has potentials for solid-state materials (metals, semiconductors) and soft matter (biomolecules, polymers) and coarse-grained or mesoscopic systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the atomic, meso, or continuum scale. LAMMPS runs on single processors or in parallel using message-passing techniques and a spatial-decomposition of the simulation domain. The code is designed to be easy to modify or extend with new functionality. @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``7Aug2019`` | ``-Python-3.7.4-kokkos`` | ``foss/2019b`` ``7Aug2019`` | ``-Python-3.7.4-kokkos-OCTP`` | ``intel/2019b`` ``7Aug2019`` | ``-Python-3.7.4-kokkos`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LAPACK.md b/docs/version-specific/supported-software/l/LAPACK.md index 2e81c4b6c..80af6d609 100644 --- a/docs/version-specific/supported-software/l/LAPACK.md +++ b/docs/version-specific/supported-software/l/LAPACK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LAPACK LAPACK is written in Fortran90 and provides routines for solving systems of simultaneous linear equations, least-squares solutions of linear systems of equations, eigenvalue problems, and singular value problems. @@ -12,3 +16,6 @@ version | toolchain ``3.12.0`` | ``GCC/13.2.0`` ``3.8.0`` | ``GCC/7.3.0-2.30`` ``3.9.1`` | ``GCC/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LASSO-Python.md b/docs/version-specific/supported-software/l/LASSO-Python.md index cb6b7db14..201a4f9fc 100644 --- a/docs/version-specific/supported-software/l/LASSO-Python.md +++ b/docs/version-specific/supported-software/l/LASSO-Python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LASSO-Python This python library is designed for general purpose usage in the field of Computer Aided Engineering (CAE). It's name originates from the original initiator and donator of the project Lasso GmbH. The library is now maintained by an open-source community. @@ -7,3 +11,6 @@ This python library is designed for general purpose usage in the field of Comput version | toolchain --------|---------- ``2.0.0`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LAST.md b/docs/version-specific/supported-software/l/LAST.md index 589a4eae8..6dbb27762 100644 --- a/docs/version-specific/supported-software/l/LAST.md +++ b/docs/version-specific/supported-software/l/LAST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LAST LAST finds similar regions between sequences. @@ -10,3 +14,6 @@ version | toolchain ``1179`` | ``GCC/10.2.0`` ``869`` | ``intel/2017a`` ``914`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LASTZ.md b/docs/version-specific/supported-software/l/LASTZ.md index 668bade88..fc748bd51 100644 --- a/docs/version-specific/supported-software/l/LASTZ.md +++ b/docs/version-specific/supported-software/l/LASTZ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LASTZ LASTZ is a program for aligning DNA sequences, a pairwise aligner. Originally designed to handle sequences the size of human chromosomes and from different species, it is also useful for sequences produced by NGS sequencing technologies such as Roche 454. @@ -10,3 +14,6 @@ version | toolchain ``1.02.00`` | ``foss/2016a`` ``1.04.03`` | ``foss/2019b`` ``1.04.22`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LBFGS++.md b/docs/version-specific/supported-software/l/LBFGS++.md index 9cd714418..ed2ef74a0 100644 --- a/docs/version-specific/supported-software/l/LBFGS++.md +++ b/docs/version-specific/supported-software/l/LBFGS++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LBFGS++ A header-only C++ library for L-BFGS and L-BFGS-B algorithms @@ -7,3 +11,6 @@ A header-only C++ library for L-BFGS and L-BFGS-B algorithms version | toolchain --------|---------- ``0.1.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LCov.md b/docs/version-specific/supported-software/l/LCov.md index b13d15917..5728d8e1f 100644 --- a/docs/version-specific/supported-software/l/LCov.md +++ b/docs/version-specific/supported-software/l/LCov.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LCov LCOV - the LTP GCOV extension @@ -7,3 +11,6 @@ LCOV - the LTP GCOV extension version | toolchain --------|---------- ``1.13`` | ``GCCcore/7.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LDC.md b/docs/version-specific/supported-software/l/LDC.md index 966e60e8f..555094e11 100644 --- a/docs/version-specific/supported-software/l/LDC.md +++ b/docs/version-specific/supported-software/l/LDC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LDC The LLVM-based D Compiler @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``1.26.0`` | | ``GCCcore/10.3.0`` ``1.30.0`` | | ``GCCcore/11.3.0`` ``1.36.0`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LEMON.md b/docs/version-specific/supported-software/l/LEMON.md index 552fd645a..349932674 100644 --- a/docs/version-specific/supported-software/l/LEMON.md +++ b/docs/version-specific/supported-software/l/LEMON.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LEMON LEMON stands for Library for Efficient Modeling and Optimization in Networks. It is a C++ template library providing efficient implementations of common data structures and algorithms with focus on combinatorial optimization tasks connected mainly with graphs and networks. @@ -7,3 +11,6 @@ LEMON stands for Library for Efficient Modeling and Optimization in Networks. I version | toolchain --------|---------- ``1.3.1`` | ``GCC/8.2.0-2.31.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LERC.md b/docs/version-specific/supported-software/l/LERC.md index 76eab3e28..6320c0a91 100644 --- a/docs/version-specific/supported-software/l/LERC.md +++ b/docs/version-specific/supported-software/l/LERC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LERC LERC is an open-source image or raster format which supports rapid encoding and decoding for any pixel type (not just RGB or Byte). Users set the maximum compression error per pixel while encoding, so the precision of the original input image is preserved (within user defined error bounds). @@ -12,3 +16,6 @@ version | toolchain ``4.0.0`` | ``GCCcore/12.2.0`` ``4.0.0`` | ``GCCcore/12.3.0`` ``4.0.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LHAPDF.md b/docs/version-specific/supported-software/l/LHAPDF.md index e5b180d80..85771a3f4 100644 --- a/docs/version-specific/supported-software/l/LHAPDF.md +++ b/docs/version-specific/supported-software/l/LHAPDF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LHAPDF Les Houches Parton Density Function LHAPDF is the standard tool for evaluating parton distribution functions (PDFs) in high-energy physics. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``6.5.3`` | ``GCC/11.3.0`` ``6.5.4`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LIANA.md b/docs/version-specific/supported-software/l/LIANA.md index 64b20542b..6cd79b353 100644 --- a/docs/version-specific/supported-software/l/LIANA.md +++ b/docs/version-specific/supported-software/l/LIANA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LIANA LIANA: a LIgand-receptor ANalysis frAmework. LIANA enables the use of any combination of ligand-receptor methods and resources, and their consensus. @@ -7,3 +11,6 @@ LIANA: a LIgand-receptor ANalysis frAmework. LIANA enables the use of any comb version | versionsuffix | toolchain --------|---------------|---------- ``0.1.11`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LIBSVM-MATLAB.md b/docs/version-specific/supported-software/l/LIBSVM-MATLAB.md index b392e72d0..5eaa48b0d 100644 --- a/docs/version-specific/supported-software/l/LIBSVM-MATLAB.md +++ b/docs/version-specific/supported-software/l/LIBSVM-MATLAB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LIBSVM-MATLAB MATLAB interface of LIBSVM, an integrated software for support vector classification, (C-SVC, nu-SVC), regression (epsilon-SVR, nu-SVR) and distribution estimation (one-class SVM). It supports multi-class classification. @@ -7,3 +11,6 @@ MATLAB interface of LIBSVM, an integrated software for support vector classifica version | versionsuffix | toolchain --------|---------------|---------- ``3.30`` | ``-MATLAB-2022b-r5`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LIBSVM-Python.md b/docs/version-specific/supported-software/l/LIBSVM-Python.md index 1412a0bfe..d9ec9a923 100644 --- a/docs/version-specific/supported-software/l/LIBSVM-Python.md +++ b/docs/version-specific/supported-software/l/LIBSVM-Python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LIBSVM-Python This tool provides a simple Python interface to LIBSVM, a library for support vector machines (http://www.csie.ntu.edu.tw/~cjlin/libsvm). The interface is very easy to use as the usage is the same as that of LIBSVM. The interface is developed with the built-in Python library "ctypes". @@ -7,3 +11,6 @@ This tool provides a simple Python interface to LIBSVM, a library for support version | toolchain --------|---------- ``3.30`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LIBSVM.md b/docs/version-specific/supported-software/l/LIBSVM.md index 4af91308b..de282845e 100644 --- a/docs/version-specific/supported-software/l/LIBSVM.md +++ b/docs/version-specific/supported-software/l/LIBSVM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LIBSVM LIBSVM is an integrated software for support vector classification, (C-SVC, nu-SVC), regression (epsilon-SVR, nu-SVR) and distribution estimation (one-class SVM). It supports multi-class classification. @@ -15,3 +19,6 @@ version | toolchain ``3.25`` | ``GCCcore/10.3.0`` ``3.25`` | ``GCCcore/11.2.0`` ``3.30`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LISFLOOD-FP.md b/docs/version-specific/supported-software/l/LISFLOOD-FP.md index 5d591b3b7..fcde88d35 100644 --- a/docs/version-specific/supported-software/l/LISFLOOD-FP.md +++ b/docs/version-specific/supported-software/l/LISFLOOD-FP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LISFLOOD-FP The LISFLOOD-FP is a raster-based hydrodynamic model originally developed by the University of Bristol. It has undergone extensive development since conception and includes a collection of numerical schemes implemented to solve a variety of mathematical approximations of the 2D shallow water equations of different complexity. The local inertia solver, known as the ACC solver, is widely used to simulate floods with gradually-varying, subcritical flow over sufficiently rough surfaces with Manning’s coefficient of at least 0.03. It has a version with CPU-specific optimisations and enhanced with a subgrid channel model. LISFLOOD-FP also includes second-order discontinuous Galerkin (DG2) and first-order finite volume (FV1) solvers of the full shallow water equations for modelling a wide range of flows, including rapidly-propagating, supercritical flows, shock waves, or flows over very smooth surfaces. The DG2/FV1 solvers are parallelised for the multi-core CPU architecture, but do not integrate with the subgrid channel model nor with the CPU-specific optimisations. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``8.1`` | ``-CUDA-11.7.0`` | ``gompi/2022a`` ``8.1`` | | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LLDB.md b/docs/version-specific/supported-software/l/LLDB.md index ebfa4367b..d7cde1cff 100644 --- a/docs/version-specific/supported-software/l/LLDB.md +++ b/docs/version-specific/supported-software/l/LLDB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LLDB The debugger component of the LLVM project @@ -7,3 +11,6 @@ The debugger component of the LLVM project version | versionsuffix | toolchain --------|---------------|---------- ``11.0.0`` | ``-Python-3.8.2`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LLVM.md b/docs/version-specific/supported-software/l/LLVM.md index d2dc8e398..888a817e4 100644 --- a/docs/version-specific/supported-software/l/LLVM.md +++ b/docs/version-specific/supported-software/l/LLVM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LLVM The LLVM Core libraries provide a modern source- and target-independent optimizer, along with code generation support for many popular CPUs (as well as some less common ones!) These libraries are built around a well specified code representation known as the LLVM intermediate representation ("LLVM IR"). The LLVM Core libraries are well documented, and it is particularly easy to invent your own language (or port an existing compiler) to use LLVM as an optimizer and code generator. @@ -47,3 +51,6 @@ version | versionsuffix | toolchain ``9.0.0`` | | ``GCCcore/8.3.0`` ``9.0.1`` | | ``GCCcore/8.3.0`` ``9.0.1`` | | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LMDB.md b/docs/version-specific/supported-software/l/LMDB.md index c7bba427e..20c7651d7 100644 --- a/docs/version-specific/supported-software/l/LMDB.md +++ b/docs/version-specific/supported-software/l/LMDB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LMDB OpenLDAP's Lightning Memory-Mapped Database (LMDB) library. @@ -19,3 +23,6 @@ version | toolchain ``0.9.29`` | ``GCCcore/11.3.0`` ``0.9.29`` | ``GCCcore/12.2.0`` ``0.9.31`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LMfit.md b/docs/version-specific/supported-software/l/LMfit.md index e06508098..36ab6f14a 100644 --- a/docs/version-specific/supported-software/l/LMfit.md +++ b/docs/version-specific/supported-software/l/LMfit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LMfit Lmfit provides a high-level interface to non-linear optimization and curve fitting problems for Python @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``1.0.3`` | | ``foss/2022a`` ``1.0.3`` | | ``intel/2022a`` ``1.2.1`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LOHHLA.md b/docs/version-specific/supported-software/l/LOHHLA.md index c2d15a294..15f329737 100644 --- a/docs/version-specific/supported-software/l/LOHHLA.md +++ b/docs/version-specific/supported-software/l/LOHHLA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LOHHLA LOHHLA, Loss Of Heterozygosity in Human Leukocyte Antigen, a computational tool to evaluate HLA loss using next-generation sequencing data. @@ -7,3 +11,6 @@ LOHHLA, Loss Of Heterozygosity in Human Leukocyte Antigen, a computational tool version | versionsuffix | toolchain --------|---------------|---------- ``2018.11.05`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LPJmL.md b/docs/version-specific/supported-software/l/LPJmL.md index cc84d8225..a9580b975 100644 --- a/docs/version-specific/supported-software/l/LPJmL.md +++ b/docs/version-specific/supported-software/l/LPJmL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LPJmL Dynamic global vegetation model with managed land and river routing @@ -7,3 +11,6 @@ Dynamic global vegetation model with managed land and river routing version | toolchain --------|---------- ``4.0.003`` | ``iimpi/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LPeg.md b/docs/version-specific/supported-software/l/LPeg.md index dd77d11a9..76c2323e7 100644 --- a/docs/version-specific/supported-software/l/LPeg.md +++ b/docs/version-specific/supported-software/l/LPeg.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LPeg LPeg is a new pattern-matching library for Lua, based on Parsing Expression Grammars (PEGs). @@ -7,3 +11,6 @@ LPeg is a new pattern-matching library for Lua, based on Parsing Expression Gram version | toolchain --------|---------- ``1.0.2`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LS-PrePost.md b/docs/version-specific/supported-software/l/LS-PrePost.md index 0ccd38a94..2f8866f6c 100644 --- a/docs/version-specific/supported-software/l/LS-PrePost.md +++ b/docs/version-specific/supported-software/l/LS-PrePost.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LS-PrePost LS-PrePost is an advanced pre and post-processor that is delivered free with LS-DYNA. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``4.6.24`` | | ``system`` ``4.7.15`` | | ``system`` ``4.7.8`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LSD2.md b/docs/version-specific/supported-software/l/LSD2.md index 54ffd1510..e52cc3f1e 100644 --- a/docs/version-specific/supported-software/l/LSD2.md +++ b/docs/version-specific/supported-software/l/LSD2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LSD2 Least-squares methods to estimate rates and dates from phylogenies @@ -13,3 +17,6 @@ version | toolchain ``2.3`` | ``GCCcore/11.3.0`` ``2.4.1`` | ``GCCcore/12.2.0`` ``2.4.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LSMS.md b/docs/version-specific/supported-software/l/LSMS.md index a54af4b75..28c42a704 100644 --- a/docs/version-specific/supported-software/l/LSMS.md +++ b/docs/version-specific/supported-software/l/LSMS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LSMS LSMS benchmark, part of CORAL suite @@ -7,3 +11,6 @@ LSMS benchmark, part of CORAL suite version | toolchain --------|---------- ``3_rev237`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LTR_retriever.md b/docs/version-specific/supported-software/l/LTR_retriever.md index 3edb51f68..ecdf0f7b3 100644 --- a/docs/version-specific/supported-software/l/LTR_retriever.md +++ b/docs/version-specific/supported-software/l/LTR_retriever.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LTR_retriever LTR_retriever is a highly accurate and sensitive program for identification of LTR retrotransposons; The LTR Assembly Index (LAI) is also included in this package. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.9.0`` | ``foss/2020b`` ``2.9.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LUMPY.md b/docs/version-specific/supported-software/l/LUMPY.md index 5d1c52599..5757b68d8 100644 --- a/docs/version-specific/supported-software/l/LUMPY.md +++ b/docs/version-specific/supported-software/l/LUMPY.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LUMPY A probabilistic framework for structural variant discovery. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.2.13`` | ``foss/2016b`` ``0.3.1`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LUSCUS.md b/docs/version-specific/supported-software/l/LUSCUS.md index 4b2fc38b0..4f60e8f31 100644 --- a/docs/version-specific/supported-software/l/LUSCUS.md +++ b/docs/version-specific/supported-software/l/LUSCUS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LUSCUS Luscus is the program for graphical display and editing of molecular systems. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.8.6`` | ``foss/2018b`` ``0.8.6`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LZO.md b/docs/version-specific/supported-software/l/LZO.md index 65ac5f443..2ac295848 100644 --- a/docs/version-specific/supported-software/l/LZO.md +++ b/docs/version-specific/supported-software/l/LZO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LZO LZO-2.06: Portable lossless data compression library @@ -27,3 +31,6 @@ version | toolchain ``2.10`` | ``foss/2018b`` ``2.10`` | ``fosscuda/2018b`` ``2.10`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/L_RNA_scaffolder.md b/docs/version-specific/supported-software/l/L_RNA_scaffolder.md index 049aed3e7..61465a6bb 100644 --- a/docs/version-specific/supported-software/l/L_RNA_scaffolder.md +++ b/docs/version-specific/supported-software/l/L_RNA_scaffolder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # L_RNA_scaffolder L_RNA_scaffolder is a novel scaffolding tool using long trancriptome reads to scaffold genome fragments @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``20141124`` | ``-Perl-5.24.0`` | ``intel/2016b`` ``20190530`` | | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/Lab-Streaming-Layer.md b/docs/version-specific/supported-software/l/Lab-Streaming-Layer.md index 0718dbc11..d084cf1b4 100644 --- a/docs/version-specific/supported-software/l/Lab-Streaming-Layer.md +++ b/docs/version-specific/supported-software/l/Lab-Streaming-Layer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Lab-Streaming-Layer The lab streaming layer (LSL) is a system for the unified collection of measurement time series in research experiments that handles both the networking, time-synchronization, (near-) real-time access as well as optionally the centralized collection, viewing and disk recording of the data. @@ -7,3 +11,6 @@ The lab streaming layer (LSL) is a system for the unified collection of measurem version | toolchain --------|---------- ``1.16.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/Lace.md b/docs/version-specific/supported-software/l/Lace.md index c35cbe555..1e49f8a78 100644 --- a/docs/version-specific/supported-software/l/Lace.md +++ b/docs/version-specific/supported-software/l/Lace.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Lace Building SuperTranscripts: A linear representation of transcriptome data @@ -7,3 +11,6 @@ Building SuperTranscripts: A linear representation of transcriptome data version | toolchain --------|---------- ``1.14.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LangChain.md b/docs/version-specific/supported-software/l/LangChain.md index 8f449b1e5..313b73064 100644 --- a/docs/version-specific/supported-software/l/LangChain.md +++ b/docs/version-specific/supported-software/l/LangChain.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LangChain LangChain is a framework for developing applications powered by large language models (LLMs). @@ -7,3 +11,6 @@ LangChain is a framework for developing applications powered by large language m version | toolchain --------|---------- ``0.2.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LayoutParser.md b/docs/version-specific/supported-software/l/LayoutParser.md index ffddadc3f..af7fd9099 100644 --- a/docs/version-specific/supported-software/l/LayoutParser.md +++ b/docs/version-specific/supported-software/l/LayoutParser.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LayoutParser A Unified Toolkit for Deep Learning Based Document Image Analysis @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.3.4`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.3.4`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LeadIT.md b/docs/version-specific/supported-software/l/LeadIT.md index 22fc8b91c..60b88222e 100644 --- a/docs/version-specific/supported-software/l/LeadIT.md +++ b/docs/version-specific/supported-software/l/LeadIT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LeadIT Visually Informed LeadOpt @@ -7,3 +11,6 @@ Visually Informed LeadOpt version | toolchain --------|---------- ``2.1.9`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/Leptonica.md b/docs/version-specific/supported-software/l/Leptonica.md index d908292a4..473d88bb7 100644 --- a/docs/version-specific/supported-software/l/Leptonica.md +++ b/docs/version-specific/supported-software/l/Leptonica.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Leptonica Leptonica is a collection of pedagogically-oriented open source software that is broadly useful for image processing and image analysis applications. @@ -10,3 +14,6 @@ version | toolchain ``1.78.0`` | ``GCCcore/8.2.0`` ``1.82.0`` | ``GCCcore/10.3.0`` ``1.83.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LevelDB.md b/docs/version-specific/supported-software/l/LevelDB.md index ea8dc2481..918e4a950 100644 --- a/docs/version-specific/supported-software/l/LevelDB.md +++ b/docs/version-specific/supported-software/l/LevelDB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LevelDB LevelDB is a fast key-value storage library written at Google that provides an ordered mapping from string keys to string values. @@ -13,3 +17,6 @@ version | toolchain ``1.22`` | ``GCCcore/11.3.0`` ``1.22`` | ``GCCcore/8.2.0`` ``1.22`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/Levenshtein.md b/docs/version-specific/supported-software/l/Levenshtein.md index 187af8f87..e0342df42 100644 --- a/docs/version-specific/supported-software/l/Levenshtein.md +++ b/docs/version-specific/supported-software/l/Levenshtein.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Levenshtein Python extension for computing string edit distances and similarities. @@ -7,3 +11,6 @@ Python extension for computing string edit distances and similarities. version | toolchain --------|---------- ``0.24.0`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LiBis.md b/docs/version-specific/supported-software/l/LiBis.md index 9df3235ca..2996591c7 100644 --- a/docs/version-specific/supported-software/l/LiBis.md +++ b/docs/version-specific/supported-software/l/LiBis.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LiBis An ultrasensitive alignment method for low input bisulfite sequencing @@ -7,3 +11,6 @@ An ultrasensitive alignment method for low input bisulfite sequencing version | versionsuffix | toolchain --------|---------------|---------- ``20200428`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LibLZF.md b/docs/version-specific/supported-software/l/LibLZF.md index c6b7c3b1a..a6779eb68 100644 --- a/docs/version-specific/supported-software/l/LibLZF.md +++ b/docs/version-specific/supported-software/l/LibLZF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LibLZF LibLZF is a very small data compression library. It consists of only two .c and two .h files and is very easy to incorporate into your own programs. The compression algorithm is very, very fast, yet still written in portable C. @@ -10,3 +14,6 @@ version | toolchain ``3.6`` | ``GCCcore/10.3.0`` ``3.6`` | ``GCCcore/11.3.0`` ``3.6`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LibSoup.md b/docs/version-specific/supported-software/l/LibSoup.md index 54c53e74c..1bbb9e607 100644 --- a/docs/version-specific/supported-software/l/LibSoup.md +++ b/docs/version-specific/supported-software/l/LibSoup.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LibSoup libsoup is an HTTP client/server library for GNOME. It uses GObjects and the glib main loop, to integrate well with GNOME applications, and also has a synchronous API, for use in threaded applications. @@ -12,3 +16,6 @@ version | toolchain ``2.74.0`` | ``GCCcore/10.3.0`` ``3.0.7`` | ``GCC/11.2.0`` ``3.0.8`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LibTIFF.md b/docs/version-specific/supported-software/l/LibTIFF.md index 5c1e1201b..25aa218a6 100644 --- a/docs/version-specific/supported-software/l/LibTIFF.md +++ b/docs/version-specific/supported-software/l/LibTIFF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LibTIFF tiff: Library and tools for reading and writing TIFF data files @@ -33,3 +37,6 @@ version | toolchain ``4.5.0`` | ``GCCcore/12.3.0`` ``4.6.0`` | ``GCCcore/13.2.0`` ``4.6.0`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LibUUID.md b/docs/version-specific/supported-software/l/LibUUID.md index f2b5b8df2..29e48075d 100644 --- a/docs/version-specific/supported-software/l/LibUUID.md +++ b/docs/version-specific/supported-software/l/LibUUID.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LibUUID Portable uuid C library @@ -13,3 +17,6 @@ version | toolchain ``1.0.3`` | ``foss/2016a`` ``1.0.3`` | ``intel/2017a`` ``1.0.3`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/Libint.md b/docs/version-specific/supported-software/l/Libint.md index f21358f15..8c22185bd 100644 --- a/docs/version-specific/supported-software/l/Libint.md +++ b/docs/version-specific/supported-software/l/Libint.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Libint Libint library is used to evaluate the traditional (electron repulsion) and certain novel two-body matrix elements (integrals) over Cartesian Gaussian functions used in modern atomic and molecular theory. @@ -34,3 +38,6 @@ version | versionsuffix | toolchain ``2.7.2`` | ``-lmax-6-cp2k`` | ``GCC/11.3.0`` ``2.7.2`` | ``-lmax-6-cp2k`` | ``GCC/12.2.0`` ``2.7.2`` | ``-lmax-6-cp2k`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/Lighter.md b/docs/version-specific/supported-software/l/Lighter.md index 98ae45ab9..8c9508c7e 100644 --- a/docs/version-specific/supported-software/l/Lighter.md +++ b/docs/version-specific/supported-software/l/Lighter.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Lighter Fast and memory-efficient sequencing error corrector @@ -9,3 +13,6 @@ version | toolchain ``1.1.1`` | ``foss/2018a`` ``1.1.2`` | ``GCC/11.2.0`` ``1.1.2`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/Lightning.md b/docs/version-specific/supported-software/l/Lightning.md index 6750a983c..4c4aea77d 100644 --- a/docs/version-specific/supported-software/l/Lightning.md +++ b/docs/version-specific/supported-software/l/Lightning.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Lightning The deep learning framework to pretrain, finetune and deploy AI models. Lightning has 4 core packages: PyTorch Lightning: Train and deploy PyTorch at scale. Lightning Fabric: Expert control. Lightning Data: Blazing fast, distributed streaming of training data from cloud storage. Lightning Apps: Build AI products and ML workflows. @@ -7,3 +11,6 @@ The deep learning framework to pretrain, finetune and deploy AI models. Lightnin version | versionsuffix | toolchain --------|---------------|---------- ``2.2.1`` | ``-CUDA-12.1.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LinBox.md b/docs/version-specific/supported-software/l/LinBox.md index f9f1416d8..ae6705206 100644 --- a/docs/version-specific/supported-software/l/LinBox.md +++ b/docs/version-specific/supported-software/l/LinBox.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LinBox C++ library for exact, high-performance linear algebra @@ -9,3 +13,6 @@ version | toolchain ``1.4.0`` | ``foss/2016a`` ``1.7.0`` | ``gfbf/2022a`` ``1.7.0`` | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/Lingeling.md b/docs/version-specific/supported-software/l/Lingeling.md index 267fe99c7..22e29f101 100644 --- a/docs/version-specific/supported-software/l/Lingeling.md +++ b/docs/version-specific/supported-software/l/Lingeling.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Lingeling One of the design principles of the state-of-the-art SAT solver Lingeling is to use as compact data structures as possible. These reduce memory usage, increase cache efficiency and thus improve runtime, particularly, when using multiple solver instances on multi-core machines, as in our parallel portfolio solver Plingeling and our cube and conquer solver Treengeling. @@ -7,3 +11,6 @@ One of the design principles of the state-of-the-art SAT solver Lingeling is to version | toolchain --------|---------- ``bcp`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LittleCMS.md b/docs/version-specific/supported-software/l/LittleCMS.md index 50a381c0b..969292c62 100644 --- a/docs/version-specific/supported-software/l/LittleCMS.md +++ b/docs/version-specific/supported-software/l/LittleCMS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LittleCMS Little CMS intends to be an OPEN SOURCE small-footprint color management engine, with special focus on accuracy and performance. @@ -26,3 +30,6 @@ version | toolchain ``2.9`` | ``foss/2017b`` ``2.9`` | ``foss/2018a`` ``2.9`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/Lmod.md b/docs/version-specific/supported-software/l/Lmod.md index 15e30e8c6..853922945 100644 --- a/docs/version-specific/supported-software/l/Lmod.md +++ b/docs/version-specific/supported-software/l/Lmod.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Lmod Lmod is a Lua based module system. Modules allow for dynamic modification of a user's environment under Unix systems. See www.tacc.utexas.edu/tacc-projects/lmod for a complete description. Lmod is a new implementation that easily handles the MODULEPATH Hierarchical problem. It is drop-in replacement for TCL/C modules and reads TCL modulefiles directly. @@ -21,3 +25,6 @@ version | toolchain ``5.9`` | ``GCC/4.8.4`` ``6.4.2`` | ``system`` ``7.3`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LncLOOM.md b/docs/version-specific/supported-software/l/LncLOOM.md index 182e4f207..653e04878 100644 --- a/docs/version-specific/supported-software/l/LncLOOM.md +++ b/docs/version-specific/supported-software/l/LncLOOM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LncLOOM LncLOOM is a graph-based framework that uses integer programming to identify combinations of short motifs that are deeply conserved in rapidly evolving sequences. @@ -7,3 +11,6 @@ LncLOOM is a graph-based framework that uses integer programming to identify com version | toolchain --------|---------- ``2.0`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LoFreq.md b/docs/version-specific/supported-software/l/LoFreq.md index 341db5dc0..179e3c6c8 100644 --- a/docs/version-specific/supported-software/l/LoFreq.md +++ b/docs/version-specific/supported-software/l/LoFreq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LoFreq Fast and sensitive variant calling from next-gen sequencing data @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.1.3.1`` | ``-Python-2.7.14`` | ``foss/2017b`` ``2.1.3.1`` | ``-Python-2.7.14`` | ``intel/2017b`` ``2.1.3.1`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LoRDEC.md b/docs/version-specific/supported-software/l/LoRDEC.md index a2bc8eca2..3806e0564 100644 --- a/docs/version-specific/supported-software/l/LoRDEC.md +++ b/docs/version-specific/supported-software/l/LoRDEC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LoRDEC Program for correcting sequencing errors in long reads (e.g., PacBio, Oxford Nanopore) using highly accurate short reads (e.g., Illumina). @@ -7,3 +11,6 @@ Program for correcting sequencing errors in long reads (e.g., PacBio, Oxford Nan version | toolchain --------|---------- ``0.9`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LocARNA.md b/docs/version-specific/supported-software/l/LocARNA.md index bbb6ed50c..c39ad900f 100644 --- a/docs/version-specific/supported-software/l/LocARNA.md +++ b/docs/version-specific/supported-software/l/LocARNA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LocARNA LocARNA is a collection of alignment tools for the structural analysis of RNA. Given a set of RNA sequences, LocARNA simultaneously aligns and predicts common structures for your RNAs. In this way, LocARNA performs Sankoff-like alignment and is in particular suited for analyzing sets of related RNAs without known common structure. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.9.2`` | | ``foss/2016b`` ``1.9.2.2`` | ``-Python-3.6.6`` | ``foss/2018b`` ``1.9.2.3`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/Log-Log4perl.md b/docs/version-specific/supported-software/l/Log-Log4perl.md index ee9e7c367..c027fdd1e 100644 --- a/docs/version-specific/supported-software/l/Log-Log4perl.md +++ b/docs/version-specific/supported-software/l/Log-Log4perl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Log-Log4perl Log4perl @@ -7,3 +11,6 @@ Log4perl version | toolchain --------|---------- ``1.47`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/Loki.md b/docs/version-specific/supported-software/l/Loki.md index 19bd57df7..6c51f68e1 100644 --- a/docs/version-specific/supported-software/l/Loki.md +++ b/docs/version-specific/supported-software/l/Loki.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Loki Loki is a C++ library of designs, containing flexible implementations of common design patterns and idioms. @@ -11,3 +15,6 @@ version | toolchain ``0.1.7`` | ``intel/2016a`` ``0.1.7`` | ``intel/2016b`` ``0.1.7`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/Longshot.md b/docs/version-specific/supported-software/l/Longshot.md index 96a0a604b..93929aca2 100644 --- a/docs/version-specific/supported-software/l/Longshot.md +++ b/docs/version-specific/supported-software/l/Longshot.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Longshot Longshot is a variant calling tool for diploid genomes using long error prone reads such as Pacific Biosciences (PacBio) SMRT and Oxford Nanopore Technologies (ONT). It takes as input an aligned BAM file and outputs a phased VCF file with variants and haplotype information. It can also output haplotype-separated BAM files that can be used for downstream analysis. Currently, it only calls single nucleotide variants (SNVs). @@ -11,3 +15,6 @@ version | toolchain ``0.4.1`` | ``GCCcore/8.3.0`` ``0.4.3`` | ``GCCcore/10.2.0`` ``0.4.5`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LoopTools.md b/docs/version-specific/supported-software/l/LoopTools.md index 7847f3cdf..e01968fc1 100644 --- a/docs/version-specific/supported-software/l/LoopTools.md +++ b/docs/version-specific/supported-software/l/LoopTools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LoopTools LoopTools is a package for evaluation of scalar and tensor one-loop integrals. It is based on the FF package by G.J. van Oldenborgh. @@ -7,3 +11,6 @@ LoopTools is a package for evaluation of scalar and tensor one-loop integrals. version | toolchain --------|---------- ``2.15`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LtrDetector.md b/docs/version-specific/supported-software/l/LtrDetector.md index ab78f750c..5f044a986 100644 --- a/docs/version-specific/supported-software/l/LtrDetector.md +++ b/docs/version-specific/supported-software/l/LtrDetector.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LtrDetector A modern tool-suite for detectinglong terminal repeat retrotransposons de-novo onthe genomic scale @@ -7,3 +11,6 @@ A modern tool-suite for detectinglong terminal repeat retrotransposons de-novo o version | versionsuffix | toolchain --------|---------------|---------- ``1.0`` | ``-Python-3.7.4`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/Lua.md b/docs/version-specific/supported-software/l/Lua.md index 4d0247b03..f1f687e2b 100644 --- a/docs/version-specific/supported-software/l/Lua.md +++ b/docs/version-specific/supported-software/l/Lua.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Lua Lua is a powerful, fast, lightweight, embeddable scripting language. Lua combines simple procedural syntax with powerful data description constructs based on associative arrays and extensible semantics. Lua is dynamically typed, runs by interpreting bytecode for a register-based virtual machine, and has automatic memory management with incremental garbage collection, making it ideal for configuration, scripting, and rapid prototyping. @@ -28,3 +32,6 @@ version | toolchain ``5.4.4`` | ``GCCcore/12.2.0`` ``5.4.6`` | ``GCCcore/12.3.0`` ``5.4.6`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LuaJIT.md b/docs/version-specific/supported-software/l/LuaJIT.md index 4c82869b8..7c2b2b341 100644 --- a/docs/version-specific/supported-software/l/LuaJIT.md +++ b/docs/version-specific/supported-software/l/LuaJIT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LuaJIT LuaJIT is a Just-In-Time Compiler (JIT) for the Lua programming language. Lua is a powerful, dynamic and light-weight programming language. It may be embedded or used as a general-purpose, stand-alone language. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.0.2`` | ``GCC/4.9.2`` ``2.1.0-beta3_20230602`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LuaJIT2-OpenResty.md b/docs/version-specific/supported-software/l/LuaJIT2-OpenResty.md index 6b5001bf6..72a882e6d 100644 --- a/docs/version-specific/supported-software/l/LuaJIT2-OpenResty.md +++ b/docs/version-specific/supported-software/l/LuaJIT2-OpenResty.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LuaJIT2-OpenResty openresty/luajit2 - OpenResty's maintained branch of LuaJIT. LuaJIT is a Just-In-Time Compiler (JIT) for the Lua programming language. Lua is a powerful, dynamic and light-weight programming language. It may be embedded or used as a general-purpose, stand-alone language. @@ -7,3 +11,6 @@ openresty/luajit2 - OpenResty's maintained branch of LuaJIT. LuaJIT is a Just-In version | toolchain --------|---------- ``2.1-20220411`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/LuaRocks.md b/docs/version-specific/supported-software/l/LuaRocks.md index e470d8df6..b3f64b62c 100644 --- a/docs/version-specific/supported-software/l/LuaRocks.md +++ b/docs/version-specific/supported-software/l/LuaRocks.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # LuaRocks LuaRocks is the package manager for Lua modules. It allows you to create and install Lua modules as self-contained packages called rocks. @@ -7,3 +11,6 @@ LuaRocks is the package manager for Lua modules. It allows you to create and in version | toolchain --------|---------- ``3.9.2`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/Lucene-Geo-Gazetteer.md b/docs/version-specific/supported-software/l/Lucene-Geo-Gazetteer.md index aff4df055..267abd520 100644 --- a/docs/version-specific/supported-software/l/Lucene-Geo-Gazetteer.md +++ b/docs/version-specific/supported-software/l/Lucene-Geo-Gazetteer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Lucene-Geo-Gazetteer A command line gazetteer built around the Geonames.org dataset, that uses the Apache Lucene library to create a searchable gazetteer. @@ -7,3 +11,6 @@ A command line gazetteer built around the Geonames.org dataset, that uses the Ap version | toolchain --------|---------- ``20170718`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/index.md b/docs/version-specific/supported-software/l/index.md index d7ecb4f26..e168b3be4 100644 --- a/docs/version-specific/supported-software/l/index.md +++ b/docs/version-specific/supported-software/l/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (l) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - *l* - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [L_RNA_scaffolder](L_RNA_scaffolder.md) * [Lab-Streaming-Layer](Lab-Streaming-Layer.md) * [Lace](Lace.md) diff --git a/docs/version-specific/supported-software/l/lDDT.md b/docs/version-specific/supported-software/l/lDDT.md index 2c33bfee4..988e0deb3 100644 --- a/docs/version-specific/supported-software/l/lDDT.md +++ b/docs/version-specific/supported-software/l/lDDT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lDDT The local Distance Difference Test (lDDT) is a superposition-free score which evaluates local distance differences in a model compared to a reference structure. @@ -7,3 +11,6 @@ The local Distance Difference Test (lDDT) is a superposition-free score which ev version | toolchain --------|---------- ``1.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lagrangian-filtering.md b/docs/version-specific/supported-software/l/lagrangian-filtering.md index 5e78ed8a3..5d63de1dd 100644 --- a/docs/version-specific/supported-software/l/lagrangian-filtering.md +++ b/docs/version-specific/supported-software/l/lagrangian-filtering.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lagrangian-filtering Temporal filtering of data in a Lagrangian frame of reference. @@ -7,3 +11,6 @@ Temporal filtering of data in a Lagrangian frame of reference. version | toolchain --------|---------- ``0.8.3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lancet.md b/docs/version-specific/supported-software/l/lancet.md index 27982f0d3..0a6a59aef 100644 --- a/docs/version-specific/supported-software/l/lancet.md +++ b/docs/version-specific/supported-software/l/lancet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lancet Lancet is a somatic variant caller (SNVs and indels) for short read data. @@ -7,3 +11,6 @@ Lancet is a somatic variant caller (SNVs and indels) for short read data. version | toolchain --------|---------- ``1.1.0`` | ``iccifort/2019.5.281`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/langchain-anthropic.md b/docs/version-specific/supported-software/l/langchain-anthropic.md index 1e32a1d3c..87f8636ed 100644 --- a/docs/version-specific/supported-software/l/langchain-anthropic.md +++ b/docs/version-specific/supported-software/l/langchain-anthropic.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # langchain-anthropic This package contains the LangChain integration for Anthropic's generative models. @@ -7,3 +11,6 @@ This package contains the LangChain integration for Anthropic's generative model version | toolchain --------|---------- ``0.1.15`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lavaan.md b/docs/version-specific/supported-software/l/lavaan.md index 27db99eba..582cf8f0a 100644 --- a/docs/version-specific/supported-software/l/lavaan.md +++ b/docs/version-specific/supported-software/l/lavaan.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lavaan Fit a variety of latent variable models, including confirmatory factor analysis, structural equation modeling and latent growth curve models. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.6-2`` | ``-R-3.4.4`` | ``intel/2018a`` ``0.6-4.1433`` | ``-R-3.6.0`` | ``foss/2019a`` ``0.6-9`` | ``-R-4.1.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lcalc.md b/docs/version-specific/supported-software/l/lcalc.md index ea8daff4a..634baf264 100644 --- a/docs/version-specific/supported-software/l/lcalc.md +++ b/docs/version-specific/supported-software/l/lcalc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lcalc Lcalc is a package for working with L-functions. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.0.5`` | ``GCCcore/11.3.0`` ``2.0.5`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/leafcutter.md b/docs/version-specific/supported-software/l/leafcutter.md index d5914b6f7..163f2ac46 100644 --- a/docs/version-specific/supported-software/l/leafcutter.md +++ b/docs/version-specific/supported-software/l/leafcutter.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # leafcutter Leafcutter quantifies RNA splicing variation using short-read RNA-seq data. The core idea is to leverage spliced reads (reads that span an intron) to quantify (differential) intron usage across samples. The advantages of this approach include: easy detection of novel introns, modeling of more complex splicing events than exonic PSI, avoiding the challenge of isoform abundance estimation, simple, computationally efficient algorithms scaling to 100s or even 1000s of samples. For details please see our bioRxiv preprint and corresponding Nature Genetics publication. @@ -7,3 +11,6 @@ Leafcutter quantifies RNA splicing variation using short-read RNA-seq data. Th version | versionsuffix | toolchain --------|---------------|---------- ``0.2.9`` | ``-R-4.2.2`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/leidenalg.md b/docs/version-specific/supported-software/l/leidenalg.md index ab9e86160..3c3873f96 100644 --- a/docs/version-specific/supported-software/l/leidenalg.md +++ b/docs/version-specific/supported-software/l/leidenalg.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # leidenalg Implementation of the Leiden algorithm for various quality functions to be used with igraph in Python. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``0.8.7`` | | ``foss/2021a`` ``0.8.8`` | | ``foss/2021b`` ``0.9.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/less.md b/docs/version-specific/supported-software/l/less.md index d94ecf3fd..31c256e7b 100644 --- a/docs/version-specific/supported-software/l/less.md +++ b/docs/version-specific/supported-software/l/less.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # less Less is a free, open-source file pager. It can be found on most versions of Linux, Unix and Mac OS, as well as on many other operating systems. @@ -7,3 +11,6 @@ Less is a free, open-source file pager. It can be found on most versions of Linu version | toolchain --------|---------- ``458`` | ``GCC/4.8.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lftp.md b/docs/version-specific/supported-software/l/lftp.md index fb4f65f7e..3bf36ca33 100644 --- a/docs/version-specific/supported-software/l/lftp.md +++ b/docs/version-specific/supported-software/l/lftp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lftp LFTP is a sophisticated ftp/http client, and a file transfer program supporting a number of network protocols. Like BASH, it has job control and uses the readline library for input. It has bookmarks, a built-in mirror command, and can transfer several files in parallel. It was designed with reliability in mind. @@ -9,3 +13,6 @@ version | toolchain ``4.6.4`` | ``GNU/4.9.3-2.25`` ``4.8.4`` | ``GCCcore/6.4.0`` ``4.9.2`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libBigWig.md b/docs/version-specific/supported-software/l/libBigWig.md index ba0e22bd7..4782dd9c2 100644 --- a/docs/version-specific/supported-software/l/libBigWig.md +++ b/docs/version-specific/supported-software/l/libBigWig.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libBigWig A C library for handling bigWig files @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.4.4`` | ``GCCcore/8.3.0`` ``0.4.6`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libFLAME.md b/docs/version-specific/supported-software/l/libFLAME.md index 60d36d336..00b39f932 100644 --- a/docs/version-specific/supported-software/l/libFLAME.md +++ b/docs/version-specific/supported-software/l/libFLAME.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libFLAME AMD fork of libFLAME. libFLAME is a portable library for dense matrix computations, providing much of the functionality present in LAPACK. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``5.2.0`` | | ``GCCcore/10.2.0`` ``5.2.0`` | | ``GCCcore/10.3.0`` ``5.2.0`` | | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libGDSII.md b/docs/version-specific/supported-software/l/libGDSII.md index 6ec2960f6..0fecdb045 100644 --- a/docs/version-specific/supported-software/l/libGDSII.md +++ b/docs/version-specific/supported-software/l/libGDSII.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libGDSII libGDSII is a C++ library for working with GDSII binary data files, intended primarily for use with the computational electromagnetism codes scuff-em and meep but sufficiently general-purpose to allow other uses as well. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.21`` | ``GCCcore/10.2.0`` ``0.21`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libGLU.md b/docs/version-specific/supported-software/l/libGLU.md index 1a9623ffc..fc056c0d6 100644 --- a/docs/version-specific/supported-software/l/libGLU.md +++ b/docs/version-specific/supported-software/l/libGLU.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libGLU The OpenGL Utility Library (GLU) is a computer graphics library for OpenGL. @@ -36,3 +40,6 @@ version | versionsuffix | toolchain ``9.0.2`` | | ``GCCcore/12.2.0`` ``9.0.3`` | | ``GCCcore/12.3.0`` ``9.0.3`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libGridXC.md b/docs/version-specific/supported-software/l/libGridXC.md index aa62ae94f..4693cf140 100644 --- a/docs/version-specific/supported-software/l/libGridXC.md +++ b/docs/version-specific/supported-software/l/libGridXC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libGridXC A library to compute the exchange and correlation energy and potential in spherical (i.e. an atom) or periodic systems. It is based on SiestaXC. @@ -14,3 +18,6 @@ version | toolchain ``0.9.6`` | ``iimpi/2021a`` ``0.9.6`` | ``iimpi/2021b`` ``1.1.0`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libICE.md b/docs/version-specific/supported-software/l/libICE.md index f12832275..ec7781611 100644 --- a/docs/version-specific/supported-software/l/libICE.md +++ b/docs/version-specific/supported-software/l/libICE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libICE X Inter-Client Exchange library for freedesktop.org @@ -9,3 +13,6 @@ version | toolchain ``1.0.9`` | ``foss/2016a`` ``1.0.9`` | ``gimkl/2.11.5`` ``1.0.9`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libMemcached.md b/docs/version-specific/supported-software/l/libMemcached.md index dbdd684e5..09cdb40e5 100644 --- a/docs/version-specific/supported-software/l/libMemcached.md +++ b/docs/version-specific/supported-software/l/libMemcached.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libMemcached libMemcached is an open source C/C++ client library and tools for the memcached server (http://danga.com/memcached). It has been designed to be light on memory usage, thread safe, and provide full access to server side methods. @@ -9,3 +13,6 @@ version | toolchain ``1.0.18`` | ``GCCcore/13.2.0`` ``1.0.18`` | ``GCCcore/6.4.0`` ``1.0.18`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libPSML.md b/docs/version-specific/supported-software/l/libPSML.md index 718ae9c44..f9c302f1c 100644 --- a/docs/version-specific/supported-software/l/libPSML.md +++ b/docs/version-specific/supported-software/l/libPSML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libPSML LibPSML provides a Fortran API to parse files in the PSeudopotential Markup Language (PSML) format. @@ -16,3 +20,6 @@ version | toolchain ``1.1.7`` | ``foss/2016b`` ``1.1.7`` | ``foss/2017a`` ``1.1.8`` | ``iccifort/2019.5.281`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libQGLViewer.md b/docs/version-specific/supported-software/l/libQGLViewer.md index 586773b4c..7a3b15490 100644 --- a/docs/version-specific/supported-software/l/libQGLViewer.md +++ b/docs/version-specific/supported-software/l/libQGLViewer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libQGLViewer libQGLViewer is a C++ library based on Qt that eases the creation of OpenGL 3D viewers. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``2.6.4`` | | ``intel/2016b`` ``2.7.1`` | | ``intel/2018a`` ``2.8.0`` | | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libRmath.md b/docs/version-specific/supported-software/l/libRmath.md index 45e2d1954..9c5064704 100644 --- a/docs/version-specific/supported-software/l/libRmath.md +++ b/docs/version-specific/supported-software/l/libRmath.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libRmath The routines supporting the distribution and special functions in R and a few others are declared in C header file Rmath.h. These can be compiled into a standalone library for linking to other applications. @@ -12,3 +16,6 @@ version | toolchain ``4.1.2`` | ``GCCcore/11.2.0`` ``4.2.0`` | ``GCCcore/10.3.0`` ``4.2.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libSBML.md b/docs/version-specific/supported-software/l/libSBML.md index e0f0b688e..1dea20742 100644 --- a/docs/version-specific/supported-software/l/libSBML.md +++ b/docs/version-specific/supported-software/l/libSBML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libSBML libSBML (Systems Biology Markup Language library) is a free, open-source programming library to help you read, write, manipulate, translate, and validate SBML files and data streams. It's not an application itself (though it does come with example programs), but rather a library you embed in your own applications. @@ -9,3 +13,6 @@ version | toolchain ``5.19.0`` | ``GCC/10.2.0`` ``5.19.0`` | ``GCC/10.3.0`` ``5.19.7`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libSM.md b/docs/version-specific/supported-software/l/libSM.md index 2338738cd..df98b35f2 100644 --- a/docs/version-specific/supported-software/l/libSM.md +++ b/docs/version-specific/supported-software/l/libSM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libSM X11 Session Management library, which allows for applications to both manage sessions, and make use of session managers to save and restore their state for later use. @@ -9,3 +13,6 @@ version | toolchain ``1.2.2`` | ``foss/2016a`` ``1.2.2`` | ``gimkl/2.11.5`` ``1.2.2`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libStatGen.md b/docs/version-specific/supported-software/l/libStatGen.md index 827c0e081..ec1a0108a 100644 --- a/docs/version-specific/supported-software/l/libStatGen.md +++ b/docs/version-specific/supported-software/l/libStatGen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libStatGen Useful set of classes for creating statistical genetic programs. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.15`` | ``GCCcore/10.2.0`` ``20190330`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libWallModelledLES.md b/docs/version-specific/supported-software/l/libWallModelledLES.md index 21ffb6400..8ab390bb4 100644 --- a/docs/version-specific/supported-software/l/libWallModelledLES.md +++ b/docs/version-specific/supported-software/l/libWallModelledLES.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libWallModelledLES libWallModelledLES is a library based on OpenFOAM® technology, extending the capabilities of OpenFOAM in the area of wall-modelled LES (WMLES). This is a turbulence modelling methodology, which allows to make LES cheaper by not resolving the inner region of turbulent boundary layers. @@ -7,3 +11,6 @@ libWallModelledLES is a library based on OpenFOAM® technology, extending the ca version | toolchain --------|---------- ``0.6.1`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libX11.md b/docs/version-specific/supported-software/l/libX11.md index 89caf96ca..b9f957c67 100644 --- a/docs/version-specific/supported-software/l/libX11.md +++ b/docs/version-specific/supported-software/l/libX11.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libX11 X11 client-side library @@ -9,3 +13,6 @@ version | toolchain ``1.6.3`` | ``foss/2016a`` ``1.6.3`` | ``gimkl/2.11.5`` ``1.6.3`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXau.md b/docs/version-specific/supported-software/l/libXau.md index 32bd30274..0fccad6d8 100644 --- a/docs/version-specific/supported-software/l/libXau.md +++ b/docs/version-specific/supported-software/l/libXau.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXau The libXau package contains a library implementing the X11 Authorization Protocol. This is useful for restricting client access to the display. @@ -10,3 +14,6 @@ version | toolchain ``1.0.8`` | ``foss/2016a`` ``1.0.8`` | ``gimkl/2.11.5`` ``1.0.8`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXcursor.md b/docs/version-specific/supported-software/l/libXcursor.md index caf1c2c08..800986450 100644 --- a/docs/version-specific/supported-software/l/libXcursor.md +++ b/docs/version-specific/supported-software/l/libXcursor.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXcursor X Cursor management library @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.1.14`` | ``foss/2016a`` ``1.1.14`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXdamage.md b/docs/version-specific/supported-software/l/libXdamage.md index 086f3d485..77d9af038 100644 --- a/docs/version-specific/supported-software/l/libXdamage.md +++ b/docs/version-specific/supported-software/l/libXdamage.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXdamage X Damage extension library @@ -9,3 +13,6 @@ version | toolchain ``1.1.4`` | ``foss/2016a`` ``1.1.4`` | ``gimkl/2.11.5`` ``1.1.4`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXdmcp.md b/docs/version-specific/supported-software/l/libXdmcp.md index 3bd70c854..c1f2aec45 100644 --- a/docs/version-specific/supported-software/l/libXdmcp.md +++ b/docs/version-specific/supported-software/l/libXdmcp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXdmcp The libXdmcp package contains a library implementing the X Display Manager Control Protocol. This is useful for allowing clients to interact with the X Display Manager. @@ -10,3 +14,6 @@ version | toolchain ``1.1.2`` | ``foss/2016a`` ``1.1.2`` | ``gimkl/2.11.5`` ``1.1.2`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXext.md b/docs/version-specific/supported-software/l/libXext.md index f4aae9887..d10a54c15 100644 --- a/docs/version-specific/supported-software/l/libXext.md +++ b/docs/version-specific/supported-software/l/libXext.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXext Common X Extensions library @@ -9,3 +13,6 @@ version | toolchain ``1.3.3`` | ``foss/2016a`` ``1.3.3`` | ``gimkl/2.11.5`` ``1.3.3`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXfixes.md b/docs/version-specific/supported-software/l/libXfixes.md index d050eb2ce..3ef64ff66 100644 --- a/docs/version-specific/supported-software/l/libXfixes.md +++ b/docs/version-specific/supported-software/l/libXfixes.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXfixes X Fixes extension library @@ -10,3 +14,6 @@ version | toolchain ``5.0.1`` | ``gimkl/2.11.5`` ``5.0.1`` | ``intel/2016a`` ``5.0.2`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXfont.md b/docs/version-specific/supported-software/l/libXfont.md index afcd4711f..72064fbf3 100644 --- a/docs/version-specific/supported-software/l/libXfont.md +++ b/docs/version-specific/supported-software/l/libXfont.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXfont X font libary @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``1.5.1`` | | ``gimkl/2.11.5`` ``1.5.1`` | ``-freetype-2.6.3`` | ``intel/2016a`` ``1.5.1`` | | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXft.md b/docs/version-specific/supported-software/l/libXft.md index 6ce963b81..16985ce64 100644 --- a/docs/version-specific/supported-software/l/libXft.md +++ b/docs/version-specific/supported-software/l/libXft.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXft X11 client-side library @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.3.2`` | | ``foss/2016a`` ``2.3.2`` | ``-fontconfig-2.11.95`` | ``intel/2016a`` ``2.3.2`` | | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXi.md b/docs/version-specific/supported-software/l/libXi.md index ba9cffdcb..1c6705f19 100644 --- a/docs/version-specific/supported-software/l/libXi.md +++ b/docs/version-specific/supported-software/l/libXi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXi LibXi provides an X Window System client interface to the XINPUT extension to the X protocol. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.7.6`` | ``foss/2016a`` ``1.7.6`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXinerama.md b/docs/version-specific/supported-software/l/libXinerama.md index 5ea0dc2f5..982a3e5dc 100644 --- a/docs/version-specific/supported-software/l/libXinerama.md +++ b/docs/version-specific/supported-software/l/libXinerama.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXinerama Xinerama multiple monitor library @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.1.3`` | ``foss/2016a`` ``1.1.3`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXmu.md b/docs/version-specific/supported-software/l/libXmu.md index cecce67ce..f386eb40a 100644 --- a/docs/version-specific/supported-software/l/libXmu.md +++ b/docs/version-specific/supported-software/l/libXmu.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXmu libXmu provides a set of miscellaneous utility convenience functions for X libraries to use. libXmuu is a lighter-weight version that does not depend on libXt or libXext @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.1.2`` | ``foss/2016a`` ``1.1.2`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXp.md b/docs/version-specific/supported-software/l/libXp.md index deb9c873d..76bc85bff 100644 --- a/docs/version-specific/supported-software/l/libXp.md +++ b/docs/version-specific/supported-software/l/libXp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXp libXp provides the X print library. @@ -7,3 +11,6 @@ libXp provides the X print library. version | toolchain --------|---------- ``1.0.3`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXpm.md b/docs/version-specific/supported-software/l/libXpm.md index 522d8cf56..06ba020d1 100644 --- a/docs/version-specific/supported-software/l/libXpm.md +++ b/docs/version-specific/supported-software/l/libXpm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXpm libXp provides the X print library. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.5.11`` | ``foss/2016a`` ``3.5.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXrandr.md b/docs/version-specific/supported-software/l/libXrandr.md index c90415a21..c4646bb8e 100644 --- a/docs/version-specific/supported-software/l/libXrandr.md +++ b/docs/version-specific/supported-software/l/libXrandr.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXrandr X Resize, Rotate and Reflection extension library @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.5.0`` | ``foss/2016a`` ``1.5.0`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXrender.md b/docs/version-specific/supported-software/l/libXrender.md index 4d345a6e1..537009dc0 100644 --- a/docs/version-specific/supported-software/l/libXrender.md +++ b/docs/version-specific/supported-software/l/libXrender.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXrender X11 client-side library @@ -9,3 +13,6 @@ version | toolchain ``0.9.9`` | ``foss/2016a`` ``0.9.9`` | ``gimkl/2.11.5`` ``0.9.9`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXt.md b/docs/version-specific/supported-software/l/libXt.md index 7e0441772..7bb1c2c23 100644 --- a/docs/version-specific/supported-software/l/libXt.md +++ b/docs/version-specific/supported-software/l/libXt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXt libXt provides the X Toolkit Intrinsics, an abstract widget library upon which other toolkits are based. Xt is the basis for many toolkits, including the Athena widgets (Xaw), and LessTif (a Motif implementation). @@ -9,3 +13,6 @@ version | toolchain ``1.1.5`` | ``foss/2016a`` ``1.1.5`` | ``gimkl/2.11.5`` ``1.1.5`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libXxf86vm.md b/docs/version-specific/supported-software/l/libXxf86vm.md index ee1311dc1..a8a184da9 100644 --- a/docs/version-specific/supported-software/l/libXxf86vm.md +++ b/docs/version-specific/supported-software/l/libXxf86vm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libXxf86vm X11 XFree86 video mode extension library @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.1.4`` | ``foss/2016a`` ``1.1.4`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libabigail.md b/docs/version-specific/supported-software/l/libabigail.md index bfa48ab08..9b3228164 100644 --- a/docs/version-specific/supported-software/l/libabigail.md +++ b/docs/version-specific/supported-software/l/libabigail.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libabigail ABIGAIL stands for the Application Binary Interface Generic Analysis and Instrumentation Library. It’s a framework which aims at helping developers and software distributors to spot some ABI-related issues like interface incompatibility in ELF shared libraries by performing a static analysis of the ELF binaries at hand. The type of interface incompatibilities that Abigail focuses on is related to changes on the exported ELF functions and variables symbols, as well as layout and size changes of data types of the functions and variables exported by shared libraries. In other words, if the return type of a function exported by a shared library changes in an incompatible way from one version of a given shared library to another, we want Abigail to help people catch that. @@ -7,3 +11,6 @@ ABIGAIL stands for the Application Binary Interface Generic Analysis and Instrum version | toolchain --------|---------- ``2.5`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libaec.md b/docs/version-specific/supported-software/l/libaec.md index 6b9d78579..9744a077d 100644 --- a/docs/version-specific/supported-software/l/libaec.md +++ b/docs/version-specific/supported-software/l/libaec.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libaec Libaec provides fast lossless compression of 1 up to 32 bit wide signed or unsigned integers (samples). The library achieves best results for low entropy data as often encountered in space imaging instrument data or numerical model output from weather or climate simulations. While floating point representations are not directly supported, they can also be efficiently coded by grouping exponents and mantissa. @@ -13,3 +17,6 @@ version | toolchain ``1.0.6`` | ``GCCcore/12.2.0`` ``1.0.6`` | ``GCCcore/12.3.0`` ``1.0.6`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libaed2.md b/docs/version-specific/supported-software/l/libaed2.md index 1ec11d4af..672a3325b 100644 --- a/docs/version-specific/supported-software/l/libaed2.md +++ b/docs/version-specific/supported-software/l/libaed2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libaed2 libaed2 is a library of modules and algorithms for simulation of "aquatic ecodynamics" - water quality, aquatic biogeochemsitry, biotic habitat and aquatic ecosystem dynamics. @@ -7,3 +11,6 @@ libaed2 is a library of modules and algorithms for simulation of "aquatic ecodyn version | toolchain --------|---------- ``1.3.0`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libaio.md b/docs/version-specific/supported-software/l/libaio.md index eb0db3d0c..9d5148133 100644 --- a/docs/version-specific/supported-software/l/libaio.md +++ b/docs/version-specific/supported-software/l/libaio.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libaio Asynchronous input/output library that uses the kernels native interface. @@ -15,3 +19,6 @@ version | toolchain ``0.3.113`` | ``GCCcore/12.2.0`` ``0.3.113`` | ``GCCcore/12.3.0`` ``0.3.113`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libarchive.md b/docs/version-specific/supported-software/l/libarchive.md index f8e5aa013..d0bd72028 100644 --- a/docs/version-specific/supported-software/l/libarchive.md +++ b/docs/version-specific/supported-software/l/libarchive.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libarchive Multi-format archive and compression library @@ -18,3 +22,6 @@ version | toolchain ``3.6.2`` | ``GCCcore/13.1.0`` ``3.7.2`` | ``GCCcore/13.2.0`` ``3.7.4`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libav.md b/docs/version-specific/supported-software/l/libav.md index 848168042..326410dcb 100644 --- a/docs/version-specific/supported-software/l/libav.md +++ b/docs/version-specific/supported-software/l/libav.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libav Libav is a friendly and community-driven effort to provide its users with a set of portable, functional and high-performance libraries for dealing with multimedia formats of all sorts. @@ -7,3 +11,6 @@ Libav is a friendly and community-driven effort to provide its users with a set version | toolchain --------|---------- ``11.10`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libavif.md b/docs/version-specific/supported-software/l/libavif.md index 29bf88d8c..6c1afc4f2 100644 --- a/docs/version-specific/supported-software/l/libavif.md +++ b/docs/version-specific/supported-software/l/libavif.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libavif This library aims to be a friendly, portable C implementation of the AV1 Image File Format, as described here: https://aomediacodec.github.io/av1-avif/ @@ -10,3 +14,6 @@ version | toolchain ``0.11.1`` | ``GCCcore/11.3.0`` ``0.9.0`` | ``foss/2020b`` ``1.0.4`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libbaseencode.md b/docs/version-specific/supported-software/l/libbaseencode.md index a3f480ed7..961e5dad5 100644 --- a/docs/version-specific/supported-software/l/libbaseencode.md +++ b/docs/version-specific/supported-software/l/libbaseencode.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libbaseencode Library written in C for encoding and decoding data using base32 or base64 according to RFC-4648 @@ -7,3 +11,6 @@ Library written in C for encoding and decoding data using base32 or base64 acco version | toolchain --------|---------- ``1.0.11`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libbitmask.md b/docs/version-specific/supported-software/l/libbitmask.md index 06cb835f5..2f46c2142 100644 --- a/docs/version-specific/supported-software/l/libbitmask.md +++ b/docs/version-specific/supported-software/l/libbitmask.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libbitmask libbitmask provides a convenient, powerful bitmask data type @@ -7,3 +11,6 @@ libbitmask provides a convenient, powerful bitmask data type version | toolchain --------|---------- ``2.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libbraiding.md b/docs/version-specific/supported-software/l/libbraiding.md index 9acacdc73..6bd705f84 100644 --- a/docs/version-specific/supported-software/l/libbraiding.md +++ b/docs/version-specific/supported-software/l/libbraiding.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libbraiding This is a project to expose the functionalitis of the Braiding program as a shared library. The original goal is to include it as a component of SageMath, but it can be used in any other c++ program. @@ -7,3 +11,6 @@ This is a project to expose the functionalitis of the Braiding program as a shar version | toolchain --------|---------- ``1.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libcdms.md b/docs/version-specific/supported-software/l/libcdms.md index 1eeedd615..256a953b1 100644 --- a/docs/version-specific/supported-software/l/libcdms.md +++ b/docs/version-specific/supported-software/l/libcdms.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libcdms Climate Data Management System Library. @@ -7,3 +11,6 @@ Climate Data Management System Library. version | versionsuffix | toolchain --------|---------------|---------- ``3.1.2`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libcerf.md b/docs/version-specific/supported-software/l/libcerf.md index 58e1ba060..720106f4b 100644 --- a/docs/version-specific/supported-software/l/libcerf.md +++ b/docs/version-specific/supported-software/l/libcerf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libcerf libcerf is a self-contained numeric library that provides an efficient and accurate implementation of complex error functions, along with Dawson, Faddeeva, and Voigt functions. @@ -27,3 +31,6 @@ version | toolchain ``2.1`` | ``GCCcore/11.3.0`` ``2.3`` | ``GCCcore/12.2.0`` ``2.3`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libcint.md b/docs/version-specific/supported-software/l/libcint.md index 150e447a7..afd4ce4ac 100644 --- a/docs/version-specific/supported-software/l/libcint.md +++ b/docs/version-specific/supported-software/l/libcint.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libcint libcint is an open source library for analytical Gaussian integrals. @@ -12,3 +16,6 @@ version | toolchain ``5.1.6`` | ``foss/2022a`` ``5.4.0`` | ``gfbf/2023a`` ``5.5.0`` | ``gfbf/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libcircle.md b/docs/version-specific/supported-software/l/libcircle.md index 1e7cd29c0..d153e861b 100644 --- a/docs/version-specific/supported-software/l/libcircle.md +++ b/docs/version-specific/supported-software/l/libcircle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libcircle An API to provide an efficient distributed queue on a cluster. libcircle is an API for distributing embarrassingly parallel workloads using self-stabilization. @@ -13,3 +17,6 @@ version | toolchain ``0.3`` | ``gompi/2022a`` ``0.3`` | ``gompi/2023a`` ``0.3`` | ``iimpi/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libcmaes.md b/docs/version-specific/supported-software/l/libcmaes.md index 15f429996..2f4956390 100644 --- a/docs/version-specific/supported-software/l/libcmaes.md +++ b/docs/version-specific/supported-software/l/libcmaes.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libcmaes libcmaes is a multithreaded C++11 library for high performance blackbox stochastic optimization using the CMA-ES algorithm for Covariance Matrix Adaptation Evolution Strategy. @@ -7,3 +11,6 @@ libcmaes is a multithreaded C++11 library for high performance blackbox stochast version | toolchain --------|---------- ``0.9.5`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libconfig.md b/docs/version-specific/supported-software/l/libconfig.md index 2783fa584..f096e9439 100644 --- a/docs/version-specific/supported-software/l/libconfig.md +++ b/docs/version-specific/supported-software/l/libconfig.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libconfig Libconfig is a simple library for processing structured configuration files @@ -11,3 +15,6 @@ version | toolchain ``1.7.2`` | ``GCCcore/7.3.0`` ``1.7.3`` | ``GCCcore/10.3.0`` ``1.7.3`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libcotp.md b/docs/version-specific/supported-software/l/libcotp.md index 01191abd8..a2b390ad0 100644 --- a/docs/version-specific/supported-software/l/libcotp.md +++ b/docs/version-specific/supported-software/l/libcotp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libcotp C library that generates TOTP and HOTP according to RFC-6238 @@ -7,3 +11,6 @@ C library that generates TOTP and HOTP according to RFC-6238 version | toolchain --------|---------- ``1.2.3`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libcpuset.md b/docs/version-specific/supported-software/l/libcpuset.md index d07dc7882..343f76a63 100644 --- a/docs/version-specific/supported-software/l/libcpuset.md +++ b/docs/version-specific/supported-software/l/libcpuset.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libcpuset libcpuset provides full access to cpuset capabilities @@ -7,3 +11,6 @@ libcpuset provides full access to cpuset capabilities version | toolchain --------|---------- ``1.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libcroco.md b/docs/version-specific/supported-software/l/libcroco.md index 4b4358edb..f689a4bd2 100644 --- a/docs/version-specific/supported-software/l/libcroco.md +++ b/docs/version-specific/supported-software/l/libcroco.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libcroco Libcroco is a standalone css2 parsing and manipulation library. @@ -9,3 +13,6 @@ version | toolchain ``0.6.11`` | ``intel/2016a`` ``0.6.13`` | ``GCC/10.2.0`` ``0.6.13`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libctl.md b/docs/version-specific/supported-software/l/libctl.md index 29412990f..1c2f5d3d4 100644 --- a/docs/version-specific/supported-software/l/libctl.md +++ b/docs/version-specific/supported-software/l/libctl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libctl libctl is a free Guile-based library implementing flexible control files for scientific simulations. @@ -10,3 +14,6 @@ version | toolchain ``4.0.0`` | ``intel/2020a`` ``4.1.3`` | ``GCCcore/6.4.0`` ``4.5.1`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libdap.md b/docs/version-specific/supported-software/l/libdap.md index d9dc9821a..936353e1a 100644 --- a/docs/version-specific/supported-software/l/libdap.md +++ b/docs/version-specific/supported-software/l/libdap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libdap A C++ SDK which contains an implementation of DAP 2.0 and the development versions of DAP3, up to 3.4. This includes both Client- and Server-side support classes. @@ -19,3 +23,6 @@ version | versionsuffix | toolchain ``3.20.7`` | | ``GCCcore/10.3.0`` ``3.20.7`` | | ``GCCcore/9.3.0`` ``3.20.8`` | | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libde265.md b/docs/version-specific/supported-software/l/libde265.md index f49058415..13178567e 100644 --- a/docs/version-specific/supported-software/l/libde265.md +++ b/docs/version-specific/supported-software/l/libde265.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libde265 libde265 is an open source implementation of the h.265 video codec @@ -10,3 +14,6 @@ version | toolchain ``1.0.15`` | ``GCC/12.3.0`` ``1.0.8`` | ``GCC/10.3.0`` ``1.0.8`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libdeflate.md b/docs/version-specific/supported-software/l/libdeflate.md index c9d82b3d0..e68cb3f47 100644 --- a/docs/version-specific/supported-software/l/libdeflate.md +++ b/docs/version-specific/supported-software/l/libdeflate.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libdeflate Heavily optimized library for DEFLATE/zlib/gzip compression and decompression. @@ -17,3 +21,6 @@ version | toolchain ``1.7`` | ``GCCcore/9.3.0`` ``1.8`` | ``GCCcore/10.3.0`` ``1.8`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libdivsufsort.md b/docs/version-specific/supported-software/l/libdivsufsort.md index d12d38986..2c546d6b1 100644 --- a/docs/version-specific/supported-software/l/libdivsufsort.md +++ b/docs/version-specific/supported-software/l/libdivsufsort.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libdivsufsort libdivsufsort is a software library that implements a lightweight suffix array construction algorithm. @@ -7,3 +11,6 @@ libdivsufsort is a software library that implements a lightweight suffix array version | toolchain --------|---------- ``2.0.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libdrm.md b/docs/version-specific/supported-software/l/libdrm.md index 7f429de4f..b67cf7ec0 100644 --- a/docs/version-specific/supported-software/l/libdrm.md +++ b/docs/version-specific/supported-software/l/libdrm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libdrm Direct Rendering Manager runtime library. @@ -29,3 +33,6 @@ version | toolchain ``2.4.92`` | ``GCCcore/7.3.0`` ``2.4.97`` | ``GCCcore/8.2.0`` ``2.4.99`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libdrs.md b/docs/version-specific/supported-software/l/libdrs.md index 9468f99e8..7074f382a 100644 --- a/docs/version-specific/supported-software/l/libdrs.md +++ b/docs/version-specific/supported-software/l/libdrs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libdrs PCMDI's old DRS format implementation @@ -7,3 +11,6 @@ PCMDI's old DRS format implementation version | toolchain --------|---------- ``3.1.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libdwarf.md b/docs/version-specific/supported-software/l/libdwarf.md index d27385a49..da43b0a7a 100644 --- a/docs/version-specific/supported-software/l/libdwarf.md +++ b/docs/version-specific/supported-software/l/libdwarf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libdwarf The DWARF Debugging Information Format is of interest to programmers working on compilers and debuggers (and anyone interested in reading or writing DWARF information)) @@ -17,3 +21,6 @@ version | toolchain ``20201201`` | ``GCCcore/10.2.0`` ``20210305`` | ``GCCcore/10.3.0`` ``20210528`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libedit.md b/docs/version-specific/supported-software/l/libedit.md index b3c0216b4..ce7daeb60 100644 --- a/docs/version-specific/supported-software/l/libedit.md +++ b/docs/version-specific/supported-software/l/libedit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libedit This BSD-style licensed command line editor library provides generic line editing, history, and tokenization functions, similar to those found in GNU Readline. @@ -12,3 +16,6 @@ version | toolchain ``20191231`` | ``GCCcore/9.3.0`` ``20210910`` | ``GCCcore/10.3.0`` ``20210910`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libelf.md b/docs/version-specific/supported-software/l/libelf.md index a725d3599..1b6b4f5c2 100644 --- a/docs/version-specific/supported-software/l/libelf.md +++ b/docs/version-specific/supported-software/l/libelf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libelf libelf is a free ELF object file access library @@ -16,3 +20,6 @@ version | toolchain ``0.8.13`` | ``GCCcore/6.3.0`` ``0.8.13`` | ``GCCcore/8.2.0`` ``0.8.13`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libemf.md b/docs/version-specific/supported-software/l/libemf.md index cc4b783bd..44aba8656 100644 --- a/docs/version-specific/supported-software/l/libemf.md +++ b/docs/version-specific/supported-software/l/libemf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libemf Library implementation of ECMA-234 API for the generation of enhanced metafiles. @@ -7,3 +11,6 @@ Library implementation of ECMA-234 API for the generation of enhanced metafiles. version | toolchain --------|---------- ``1.0.13`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libepoxy.md b/docs/version-specific/supported-software/l/libepoxy.md index f2897b97b..b60d2a418 100644 --- a/docs/version-specific/supported-software/l/libepoxy.md +++ b/docs/version-specific/supported-software/l/libepoxy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libepoxy Epoxy is a library for handling OpenGL function pointer management for you @@ -18,3 +22,6 @@ version | toolchain ``1.5.4`` | ``GCCcore/9.3.0`` ``1.5.8`` | ``GCCcore/10.3.0`` ``1.5.8`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libev.md b/docs/version-specific/supported-software/l/libev.md index 271a8508f..3735571af 100644 --- a/docs/version-specific/supported-software/l/libev.md +++ b/docs/version-specific/supported-software/l/libev.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libev A full-featured and high-performance (see benchmark) event loop that is loosely modelled after libevent, but without its limitations and bugs. It is used in GNU Virtual Private Ethernet, rxvt-unicode, auditd, the Deliantra MORPG Server and Client, and many other programs. @@ -9,3 +13,6 @@ version | toolchain ``4.33`` | ``GCC/11.2.0`` ``4.33`` | ``GCC/11.3.0`` ``4.33`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libevent.md b/docs/version-specific/supported-software/l/libevent.md index 0cce79052..3266dd276 100644 --- a/docs/version-specific/supported-software/l/libevent.md +++ b/docs/version-specific/supported-software/l/libevent.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libevent The libevent API provides a mechanism to execute a callback function when a specific event occurs on a file descriptor or after a timeout has been reached. Furthermore, libevent also support callbacks due to signals or regular timeouts. @@ -29,3 +33,6 @@ version | toolchain ``2.1.8`` | ``GCCcore/8.2.0`` ``2.1.8`` | ``GCCcore/8.3.0`` ``2.1.8`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libexif.md b/docs/version-specific/supported-software/l/libexif.md index 7ec43dc5b..920675b1a 100644 --- a/docs/version-specific/supported-software/l/libexif.md +++ b/docs/version-specific/supported-software/l/libexif.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libexif A library for parsing, editing, and saving EXIF data. @@ -7,3 +11,6 @@ A library for parsing, editing, and saving EXIF data. version | toolchain --------|---------- ``0.6.24`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libfabric.md b/docs/version-specific/supported-software/l/libfabric.md index baaf9d8dd..9cfab9208 100644 --- a/docs/version-specific/supported-software/l/libfabric.md +++ b/docs/version-specific/supported-software/l/libfabric.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libfabric Libfabric is a core component of OFI. It is the library that defines and exports the user-space API of OFI, and is typically the only software that applications deal with directly. It works in conjunction with provider libraries, which are often integrated directly into libfabric. @@ -19,3 +23,6 @@ version | toolchain ``1.19.0`` | ``GCCcore/13.2.0`` ``1.21.0`` | ``GCCcore/13.3.0`` ``1.9.1`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libfdf.md b/docs/version-specific/supported-software/l/libfdf.md index a6e21cca1..496646c4b 100644 --- a/docs/version-specific/supported-software/l/libfdf.md +++ b/docs/version-specific/supported-software/l/libfdf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libfdf LibFDF provides a Fortran API to parse files in the Flexible Data Format (FDF). @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``0.2.2`` | ``-serial`` | ``intel-compilers/2021.2.0`` ``0.2.2`` | ``-serial`` | ``intel-compilers/2021.4.0`` ``0.5.0`` | | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libffcall.md b/docs/version-specific/supported-software/l/libffcall.md index 9d48b7a4f..550cfd484 100644 --- a/docs/version-specific/supported-software/l/libffcall.md +++ b/docs/version-specific/supported-software/l/libffcall.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libffcall GNU Libffcall is a collection of four libraries which can be used to build foreign function call interfaces in embedded interpreters @@ -10,3 +14,6 @@ version | toolchain ``2.2`` | ``GCCcore/8.3.0`` ``2.2`` | ``GCCcore/9.3.0`` ``2.4`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libffi.md b/docs/version-specific/supported-software/l/libffi.md index a8cc075bc..c42708dc0 100644 --- a/docs/version-specific/supported-software/l/libffi.md +++ b/docs/version-specific/supported-software/l/libffi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libffi The libffi library provides a portable, high level programming interface to various calling conventions. This allows a programmer to call any function specified by a call interface description at run-time. @@ -33,3 +37,6 @@ version | toolchain ``3.4.4`` | ``GCCcore/13.1.0`` ``3.4.4`` | ``GCCcore/13.2.0`` ``3.4.5`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libfontenc.md b/docs/version-specific/supported-software/l/libfontenc.md index e4448c728..ae39b3b4f 100644 --- a/docs/version-specific/supported-software/l/libfontenc.md +++ b/docs/version-specific/supported-software/l/libfontenc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libfontenc X11 font encoding library @@ -9,3 +13,6 @@ version | toolchain ``1.1.3`` | ``foss/2016a`` ``1.1.3`` | ``gimkl/2.11.5`` ``1.1.3`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libfyaml.md b/docs/version-specific/supported-software/l/libfyaml.md index f87680ac8..834701080 100644 --- a/docs/version-specific/supported-software/l/libfyaml.md +++ b/docs/version-specific/supported-software/l/libfyaml.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libfyaml Fully feature complete YAML parser and emitter, supporting the latest YAML spec and passing the full YAML testsuite. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.9`` | ``GCCcore/12.2.0`` ``0.9`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libgcrypt.md b/docs/version-specific/supported-software/l/libgcrypt.md index 4f8672161..39ac1f259 100644 --- a/docs/version-specific/supported-software/l/libgcrypt.md +++ b/docs/version-specific/supported-software/l/libgcrypt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libgcrypt Libgcrypt is a general purpose cryptographic library originally based on code from GnuPG @@ -15,3 +19,6 @@ version | toolchain ``1.9.2`` | ``GCCcore/10.2.0`` ``1.9.2`` | ``GCCcore/10.3.0`` ``1.9.3`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libgd.md b/docs/version-specific/supported-software/l/libgd.md index ea000c6b6..e893818d9 100644 --- a/docs/version-specific/supported-software/l/libgd.md +++ b/docs/version-specific/supported-software/l/libgd.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libgd GD is an open source code library for the dynamic creation of images by programmers. @@ -27,3 +31,6 @@ version | toolchain ``2.3.3`` | ``GCCcore/12.2.0`` ``2.3.3`` | ``GCCcore/12.3.0`` ``2.3.3`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libgdiplus.md b/docs/version-specific/supported-software/l/libgdiplus.md index d21a0b51b..c9a5f5739 100644 --- a/docs/version-specific/supported-software/l/libgdiplus.md +++ b/docs/version-specific/supported-software/l/libgdiplus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libgdiplus Libgdiplus is the Mono library that provides a GDI+-compatible API on non-Windows operating systems. @@ -7,3 +11,6 @@ Libgdiplus is the Mono library that provides a GDI+-compatible API on non-Windo version | toolchain --------|---------- ``6.1`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libgeotiff.md b/docs/version-specific/supported-software/l/libgeotiff.md index 88107d2f9..47d274cc5 100644 --- a/docs/version-specific/supported-software/l/libgeotiff.md +++ b/docs/version-specific/supported-software/l/libgeotiff.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libgeotiff Library for reading and writing coordinate system information from/to GeoTIFF files @@ -18,3 +22,6 @@ version | toolchain ``1.7.1`` | ``GCCcore/11.3.0`` ``1.7.1`` | ``GCCcore/12.2.0`` ``1.7.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libgit2.md b/docs/version-specific/supported-software/l/libgit2.md index 419b54943..85f638017 100644 --- a/docs/version-specific/supported-software/l/libgit2.md +++ b/docs/version-specific/supported-software/l/libgit2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libgit2 libgit2 is a portable, pure C implementation of the Git core methods provided as a re-entrant linkable library with a solid API, allowing you to write native speed custom Git applications in any language which supports C bindings. @@ -15,3 +19,6 @@ version | toolchain ``1.5.0`` | ``GCCcore/12.2.0`` ``1.7.1`` | ``GCCcore/12.3.0`` ``1.7.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libglade.md b/docs/version-specific/supported-software/l/libglade.md index 21a1d42db..37402a251 100644 --- a/docs/version-specific/supported-software/l/libglade.md +++ b/docs/version-specific/supported-software/l/libglade.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libglade Libglade is a library for constructing user interfaces dynamically from XML descriptions. @@ -10,3 +14,6 @@ version | toolchain ``2.6.4`` | ``intel/2016a`` ``2.6.4`` | ``intel/2017b`` ``2.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libglvnd.md b/docs/version-specific/supported-software/l/libglvnd.md index 6460a427b..c4be43d64 100644 --- a/docs/version-specific/supported-software/l/libglvnd.md +++ b/docs/version-specific/supported-software/l/libglvnd.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libglvnd libglvnd is a vendor-neutral dispatch layer for arbitrating OpenGL API calls between multiple vendors. @@ -16,3 +20,6 @@ version | toolchain ``1.6.0`` | ``GCCcore/12.2.0`` ``1.6.0`` | ``GCCcore/12.3.0`` ``1.7.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libgpg-error.md b/docs/version-specific/supported-software/l/libgpg-error.md index fef204d54..2c9511911 100644 --- a/docs/version-specific/supported-software/l/libgpg-error.md +++ b/docs/version-specific/supported-software/l/libgpg-error.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libgpg-error Libgpg-error is a small library that defines common error values for all GnuPG components. @@ -15,3 +19,6 @@ version | toolchain ``1.42`` | ``GCCcore/11.2.0`` ``1.46`` | ``GCCcore/11.3.0`` ``1.48`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libgpuarray.md b/docs/version-specific/supported-software/l/libgpuarray.md index 5a1fe8829..7ca531113 100644 --- a/docs/version-specific/supported-software/l/libgpuarray.md +++ b/docs/version-specific/supported-software/l/libgpuarray.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libgpuarray Library to manipulate tensors on the GPU. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``0.7.6`` | | ``fosscuda/2019a`` ``0.7.6`` | ``-Python-3.7.4`` | ``fosscuda/2019b`` ``0.7.6`` | | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libgtextutils.md b/docs/version-specific/supported-software/l/libgtextutils.md index b7e5a4bca..cabe8bfde 100644 --- a/docs/version-specific/supported-software/l/libgtextutils.md +++ b/docs/version-specific/supported-software/l/libgtextutils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libgtextutils ligtextutils is a dependency of fastx-toolkit and is provided via the same upstream @@ -10,3 +14,6 @@ version | toolchain ``0.7`` | ``foss/2016a`` ``0.7`` | ``foss/2016b`` ``0.7`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libgxps.md b/docs/version-specific/supported-software/l/libgxps.md index f5a55e93e..9083eae7b 100644 --- a/docs/version-specific/supported-software/l/libgxps.md +++ b/docs/version-specific/supported-software/l/libgxps.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libgxps libgxps is a GObject based library for handling and rendering XPS documents. @@ -7,3 +11,6 @@ libgxps is a GObject based library for handling and rendering XPS documents. version | toolchain --------|---------- ``0.3.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libhandy.md b/docs/version-specific/supported-software/l/libhandy.md index bda31c252..1e5df4c0c 100644 --- a/docs/version-specific/supported-software/l/libhandy.md +++ b/docs/version-specific/supported-software/l/libhandy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libhandy Building blocks for modern adaptive GNOME apps @@ -7,3 +11,6 @@ Building blocks for modern adaptive GNOME apps version | toolchain --------|---------- ``1.8.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libharu.md b/docs/version-specific/supported-software/l/libharu.md index e41073f46..f17d8f14d 100644 --- a/docs/version-specific/supported-software/l/libharu.md +++ b/docs/version-specific/supported-software/l/libharu.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libharu libHaru is a free, cross platform, open source library for generating PDF files. @@ -19,3 +23,6 @@ version | toolchain ``2.3.0`` | ``foss/2021b`` ``2.3.0`` | ``intel/2017a`` ``2.3.0`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libheif.md b/docs/version-specific/supported-software/l/libheif.md index 8f97594f6..737ad75f6 100644 --- a/docs/version-specific/supported-software/l/libheif.md +++ b/docs/version-specific/supported-software/l/libheif.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libheif libheif is an HEIF and AVIF file format decoder and encoder @@ -10,3 +14,6 @@ version | toolchain ``1.12.0`` | ``GCC/11.2.0`` ``1.16.2`` | ``GCC/11.3.0`` ``1.17.6`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libhomfly.md b/docs/version-specific/supported-software/l/libhomfly.md index 8e819c2a8..6b843362b 100644 --- a/docs/version-specific/supported-software/l/libhomfly.md +++ b/docs/version-specific/supported-software/l/libhomfly.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libhomfly This is basically a conversion of the program written by Robert J Jenkins Jr into a shared library. It accepts as entry a character string, formatted in the same way as the input files that the original code used (see below). The returned value is the string that the original program would print on screen. @@ -7,3 +11,6 @@ This is basically a conversion of the program written by Robert J Jenkins Jr int version | toolchain --------|---------- ``1.02r6`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libibmad.md b/docs/version-specific/supported-software/l/libibmad.md index 56df3d07e..b2b9d2d40 100644 --- a/docs/version-specific/supported-software/l/libibmad.md +++ b/docs/version-specific/supported-software/l/libibmad.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libibmad libibmad is a convenience library to encode, decode, and dump IB MAD packets. It is implemented on top of and in conjunction with libibumad (the umad kernel interface library.) @@ -7,3 +11,6 @@ libibmad is a convenience library to encode, decode, and dump IB MAD packets. It version | toolchain --------|---------- ``1.3.12`` | ``GCC/4.9.3-2.25`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libibumad.md b/docs/version-specific/supported-software/l/libibumad.md index 3b301309a..92167a42d 100644 --- a/docs/version-specific/supported-software/l/libibumad.md +++ b/docs/version-specific/supported-software/l/libibumad.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libibumad libibumad is the umad kernel interface library. @@ -7,3 +11,6 @@ libibumad is the umad kernel interface library. version | toolchain --------|---------- ``1.3.10.2`` | ``GCC/4.9.3-2.25`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libiconv.md b/docs/version-specific/supported-software/l/libiconv.md index ebc1da7b3..4cb6922c5 100644 --- a/docs/version-specific/supported-software/l/libiconv.md +++ b/docs/version-specific/supported-software/l/libiconv.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libiconv Libiconv converts from one character encoding to another through Unicode conversion @@ -21,3 +25,6 @@ version | toolchain ``1.17`` | ``GCCcore/12.3.0`` ``1.17`` | ``GCCcore/13.2.0`` ``1.17`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libidn.md b/docs/version-specific/supported-software/l/libidn.md index e61858692..bc7b473ec 100644 --- a/docs/version-specific/supported-software/l/libidn.md +++ b/docs/version-specific/supported-software/l/libidn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libidn GNU Libidn is a fully documented implementation of the Stringprep, Punycode and IDNA specifications. Libidn's purpose is to encode and decode internationalized domain names. @@ -19,3 +23,6 @@ version | toolchain ``1.36`` | ``GCCcore/10.3.0`` ``1.38`` | ``GCCcore/11.2.0`` ``1.41`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libidn2.md b/docs/version-specific/supported-software/l/libidn2.md index db88ce77e..794d84735 100644 --- a/docs/version-specific/supported-software/l/libidn2.md +++ b/docs/version-specific/supported-software/l/libidn2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libidn2 GNU Libidn is a fully documented implementation of the Stringprep, Punycode and IDNA specifications. Libidn's purpose is to encode and decode internationalized domain names. @@ -17,3 +21,6 @@ version | toolchain ``2.3.2`` | ``GCCcore/11.3.0`` ``2.3.2`` | ``GCCcore/13.2.0`` ``2.3.7`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libjpeg-turbo.md b/docs/version-specific/supported-software/l/libjpeg-turbo.md index 10962e901..48677afae 100644 --- a/docs/version-specific/supported-software/l/libjpeg-turbo.md +++ b/docs/version-specific/supported-software/l/libjpeg-turbo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libjpeg-turbo libjpeg-turbo is a fork of the original IJG libjpeg which uses SIMD to accelerate baseline JPEG compression and decompression. libjpeg is a library that implements JPEG image encoding, decoding and transcoding. @@ -34,3 +38,6 @@ version | versionsuffix | toolchain ``2.1.5.1`` | | ``GCCcore/12.3.0`` ``3.0.1`` | | ``GCCcore/13.2.0`` ``3.0.1`` | | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libjxl.md b/docs/version-specific/supported-software/l/libjxl.md index fd86b0f8f..eea3293c7 100644 --- a/docs/version-specific/supported-software/l/libjxl.md +++ b/docs/version-specific/supported-software/l/libjxl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libjxl JPEG XL image format reference implementation @@ -11,3 +15,6 @@ version | toolchain ``0.8.1`` | ``foss/2022a`` ``0.8.2`` | ``GCCcore/12.3.0`` ``0.8.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libleidenalg.md b/docs/version-specific/supported-software/l/libleidenalg.md index 7422f0568..513ae3a57 100644 --- a/docs/version-specific/supported-software/l/libleidenalg.md +++ b/docs/version-specific/supported-software/l/libleidenalg.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libleidenalg Implements the Leiden algorithm in C++ @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.11.1`` | ``foss/2022b`` ``0.11.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libmad.md b/docs/version-specific/supported-software/l/libmad.md index 5bb7e631c..0f636c635 100644 --- a/docs/version-specific/supported-software/l/libmad.md +++ b/docs/version-specific/supported-software/l/libmad.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libmad MAD is a high-quality MPEG audio decoder. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.15.1b`` | ``GCCcore/11.3.0`` ``0.15.1b`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libmatheval.md b/docs/version-specific/supported-software/l/libmatheval.md index 0615ec72c..fcead85dc 100644 --- a/docs/version-specific/supported-software/l/libmatheval.md +++ b/docs/version-specific/supported-software/l/libmatheval.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libmatheval GNU libmatheval is a library (callable from C and Fortran) to parse and evaluate symbolic expressions input as text. @@ -15,3 +19,6 @@ version | toolchain ``1.1.11`` | ``foss/2017a`` ``1.1.11`` | ``intel/2016a`` ``1.1.11`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libmaus2.md b/docs/version-specific/supported-software/l/libmaus2.md index f482698ba..58de17cac 100644 --- a/docs/version-specific/supported-software/l/libmaus2.md +++ b/docs/version-specific/supported-software/l/libmaus2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libmaus2 libmaus2 is a collection of data structures and algorithms. @@ -9,3 +13,6 @@ version | toolchain ``2.0.453`` | ``intel/2018a`` ``2.0.499`` | ``GCC/11.3.0`` ``2.0.813`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libmbd.md b/docs/version-specific/supported-software/l/libmbd.md index 2266af3da..ea5272f61 100644 --- a/docs/version-specific/supported-software/l/libmbd.md +++ b/docs/version-specific/supported-software/l/libmbd.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libmbd Libmbd implements the many-body dispersion (MBD) method in several programming languages and frameworks: - The Fortran implementation is the reference, most advanced implementation, with support for analytical gradients and distributed parallelism, and additional functionality beyond the MBD method itself. It provides a low-level and a high-level Fortran API, as well as a C API. Furthermore, Python bindings to the C API are provided. - The Python/Numpy implementation is intended for prototyping, and as a high-level language reference. - The Python/Tensorflow implementation is an experiment that should enable rapid prototyping of machine learning applications with MBD. The Python-based implementations as well as Python bindings to the Libmbd C API are accessible from the Python package called Pymbd. @@ -10,3 +14,6 @@ version | toolchain ``0.10.4`` | ``foss/2021a`` ``0.10.4`` | ``intel/2020b`` ``0.10.4`` | ``intel/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libmicrohttpd.md b/docs/version-specific/supported-software/l/libmicrohttpd.md index 3c390ad66..ba870643c 100644 --- a/docs/version-specific/supported-software/l/libmicrohttpd.md +++ b/docs/version-specific/supported-software/l/libmicrohttpd.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libmicrohttpd GNU libmicrohttpd is a small C library that is supposed to make it easy to run an HTTP server as part of another application. @@ -10,3 +14,6 @@ version | toolchain ``0.9.73`` | ``GCCcore/10.2.0`` ``0.9.73`` | ``GCCcore/8.2.0`` ``0.9.73`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libmo_unpack.md b/docs/version-specific/supported-software/l/libmo_unpack.md index 7ccf5587f..ca94f484c 100644 --- a/docs/version-specific/supported-software/l/libmo_unpack.md +++ b/docs/version-specific/supported-software/l/libmo_unpack.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libmo_unpack A library for handling the WGDOS and RLE compression schemes used in UM files. @@ -7,3 +11,6 @@ A library for handling the WGDOS and RLE compression schemes used in UM files. version | toolchain --------|---------- ``3.1.2`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libmypaint.md b/docs/version-specific/supported-software/l/libmypaint.md index 298673dcf..bcf172aaf 100644 --- a/docs/version-specific/supported-software/l/libmypaint.md +++ b/docs/version-specific/supported-software/l/libmypaint.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libmypaint libmypaint, a.k.a. "brushlib", is a library for making brushstrokes which is used by MyPaint and other projects @@ -7,3 +11,6 @@ libmypaint, a.k.a. "brushlib", is a library for making brushstrokes which is use version | toolchain --------|---------- ``1.6.1`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libnsl.md b/docs/version-specific/supported-software/l/libnsl.md index ca2d6a7d8..dd1a1710f 100644 --- a/docs/version-specific/supported-software/l/libnsl.md +++ b/docs/version-specific/supported-software/l/libnsl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libnsl The libnsl package contains the public client interface for NIS(YP). @@ -10,3 +14,6 @@ version | toolchain ``2.0.0`` | ``GCCcore/11.3.0`` ``2.0.0`` | ``GCCcore/12.2.0`` ``2.0.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libobjcryst.md b/docs/version-specific/supported-software/l/libobjcryst.md index 4dfb02602..059660054 100644 --- a/docs/version-specific/supported-software/l/libobjcryst.md +++ b/docs/version-specific/supported-software/l/libobjcryst.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libobjcryst ObjCryst++ is Object-Oriented Crystallographic Library for C++ @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2017.2.3`` | ``intel/2020a`` ``2021.1.2`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libogg.md b/docs/version-specific/supported-software/l/libogg.md index 58e29108b..cb4c1e978 100644 --- a/docs/version-specific/supported-software/l/libogg.md +++ b/docs/version-specific/supported-software/l/libogg.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libogg Ogg is a multimedia container format, and the native file and stream format for the Xiph.org multimedia codecs. @@ -12,3 +16,6 @@ version | toolchain ``1.3.5`` | ``GCCcore/11.3.0`` ``1.3.5`` | ``GCCcore/12.2.0`` ``1.3.5`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libopus.md b/docs/version-specific/supported-software/l/libopus.md index 5fb60ebca..6014bf9dd 100644 --- a/docs/version-specific/supported-software/l/libopus.md +++ b/docs/version-specific/supported-software/l/libopus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libopus Opus is a totally open, royalty-free, highly versatile audio codec. Opus is unmatched for interactive speech and music transmission over the Internet, but is also intended for storage and streaming applications. It is standardized by the Internet Engineering Task Force (IETF) as RFC 6716 which incorporated technology from Skype’s SILK codec and Xiph.Org’s CELT codec. @@ -9,3 +13,6 @@ version | toolchain ``1.3.1`` | ``GCCcore/11.3.0`` ``1.3.1`` | ``GCCcore/12.2.0`` ``1.4`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libosmium.md b/docs/version-specific/supported-software/l/libosmium.md index d0eabbc75..beb24ac80 100644 --- a/docs/version-specific/supported-software/l/libosmium.md +++ b/docs/version-specific/supported-software/l/libosmium.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libosmium A fast and flexible C++ library for working with OpenStreetMap data. The Osmium Library has extensive support for all types of OSM entities: nodes, ways, relations, and changesets. It allows reading from and writing to OSM files in XML and PBF formats, including change files and full history files. Osmium can store OSM data in memory and on disk in various formats and using various indexes. Its easy to use handler interface allows you to quickly write data filtering and conversion functions. Osmium can create WKT, WKB, OGR, GEOS and GeoJSON geometries for easy conversion into many GIS formats and it can assemble multipolygons from ways and relations. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.15.4`` | ``-Python-3.6.6`` | ``foss/2018b`` ``2.15.6`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libpci.md b/docs/version-specific/supported-software/l/libpci.md index 88cbf27d3..c1ee7fd39 100644 --- a/docs/version-specific/supported-software/l/libpci.md +++ b/docs/version-specific/supported-software/l/libpci.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libpci Library for portable access to PCI bus configuration registers from PCI Utils. @@ -10,3 +14,6 @@ version | toolchain ``3.7.0`` | ``GCCcore/10.3.0`` ``3.7.0`` | ``GCCcore/11.2.0`` ``3.7.0`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libpciaccess.md b/docs/version-specific/supported-software/l/libpciaccess.md index de3eed78d..9c77f8f6f 100644 --- a/docs/version-specific/supported-software/l/libpciaccess.md +++ b/docs/version-specific/supported-software/l/libpciaccess.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libpciaccess Generic PCI access library. @@ -26,3 +30,6 @@ version | toolchain ``0.17`` | ``GCCcore/12.3.0`` ``0.17`` | ``GCCcore/13.2.0`` ``0.18.1`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libplinkio.md b/docs/version-specific/supported-software/l/libplinkio.md index 9fc21aa61..6b812da5f 100644 --- a/docs/version-specific/supported-software/l/libplinkio.md +++ b/docs/version-specific/supported-software/l/libplinkio.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libplinkio A small C and Python library for reading PLINK genotype files. @@ -7,3 +11,6 @@ A small C and Python library for reading PLINK genotype files. version | toolchain --------|---------- ``0.9.8`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libpng.md b/docs/version-specific/supported-software/l/libpng.md index 00cf0fbf7..f17f2b796 100644 --- a/docs/version-specific/supported-software/l/libpng.md +++ b/docs/version-specific/supported-software/l/libpng.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libpng libpng is the official PNG reference library @@ -40,3 +44,6 @@ version | toolchain ``1.6.39`` | ``GCCcore/12.3.0`` ``1.6.40`` | ``GCCcore/13.2.0`` ``1.6.43`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libpsl.md b/docs/version-specific/supported-software/l/libpsl.md index a878670bc..555b834ef 100644 --- a/docs/version-specific/supported-software/l/libpsl.md +++ b/docs/version-specific/supported-software/l/libpsl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libpsl C library for the Public Suffix List @@ -13,3 +17,6 @@ version | toolchain ``0.21.1`` | ``GCCcore/10.3.0`` ``0.21.1`` | ``GCCcore/11.2.0`` ``0.21.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libpsortb.md b/docs/version-specific/supported-software/l/libpsortb.md index 9a094bfc2..614b4f0b3 100644 --- a/docs/version-specific/supported-software/l/libpsortb.md +++ b/docs/version-specific/supported-software/l/libpsortb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libpsortb PSORT family of programs for subcellular localization prediction as well as other datasets and resources relevant to localization prediction. @@ -7,3 +11,6 @@ PSORT family of programs for subcellular localization prediction as well as othe version | toolchain --------|---------- ``1.0`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libpspio.md b/docs/version-specific/supported-software/l/libpspio.md index 73d9c296a..5395352eb 100644 --- a/docs/version-specific/supported-software/l/libpspio.md +++ b/docs/version-specific/supported-software/l/libpspio.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libpspio libpspio is a library to read and write pseudopotentials in multiple formats. @@ -12,3 +16,6 @@ version | toolchain ``0.2.4`` | ``iccifort/2020.4.304`` ``0.2.4`` | ``intel-compilers/2021.2.0`` ``0.2.4`` | ``intel-compilers/2021.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libpthread-stubs.md b/docs/version-specific/supported-software/l/libpthread-stubs.md index 59ae6a9f8..bf9ce83e0 100644 --- a/docs/version-specific/supported-software/l/libpthread-stubs.md +++ b/docs/version-specific/supported-software/l/libpthread-stubs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libpthread-stubs The X protocol C-language Binding (XCB) is a replacement for Xlib featuring a small footprint, latency hiding, direct access to the protocol, improved threading support, and extensibility. @@ -13,3 +17,6 @@ version | toolchain ``0.3`` | ``intel/2016a`` ``0.3`` | ``intel/2016b`` ``0.4`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libreadline.md b/docs/version-specific/supported-software/l/libreadline.md index e6ad0d2bd..54dfb809d 100644 --- a/docs/version-specific/supported-software/l/libreadline.md +++ b/docs/version-specific/supported-software/l/libreadline.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libreadline The GNU Readline library provides a set of functions for use by applications that allow users to edit command lines as they are typed in. Both Emacs and vi editing modes are available. The Readline library includes additional functions to maintain a list of previously-entered command lines, to recall and perhaps reedit those lines, and perform csh-like history expansion on previous commands. @@ -46,3 +50,6 @@ version | toolchain ``8.2`` | ``GCCcore/13.1.0`` ``8.2`` | ``GCCcore/13.2.0`` ``8.2`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/librosa.md b/docs/version-specific/supported-software/l/librosa.md index ec093eab1..f7871b2ba 100644 --- a/docs/version-specific/supported-software/l/librosa.md +++ b/docs/version-specific/supported-software/l/librosa.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # librosa Audio and music processing in Python @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.10.1`` | | ``foss/2023a`` ``0.7.2`` | ``-Python-3.7.4`` | ``foss/2019b`` ``0.7.2`` | ``-Python-3.7.4`` | ``fosscuda/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/librsb.md b/docs/version-specific/supported-software/l/librsb.md index f557264ee..5a91ae72a 100644 --- a/docs/version-specific/supported-software/l/librsb.md +++ b/docs/version-specific/supported-software/l/librsb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # librsb A shared memory parallel sparse matrix computations library for the Recursive Sparse Blocks format @@ -11,3 +15,6 @@ version | toolchain ``1.2.0.9`` | ``GCC/10.2.0`` ``1.3.0.0`` | ``GCC/10.2.0`` ``1.3.0.1`` | ``GCC/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/librsvg.md b/docs/version-specific/supported-software/l/librsvg.md index 5b42a35e8..3f6a927b6 100644 --- a/docs/version-specific/supported-software/l/librsvg.md +++ b/docs/version-specific/supported-software/l/librsvg.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # librsvg librsvg is a library to render SVG files using cairo. @@ -12,3 +16,6 @@ version | toolchain ``2.52.8`` | ``GCCcore/11.2.0`` ``2.55.1`` | ``GCCcore/11.3.0`` ``2.58.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/librttopo.md b/docs/version-specific/supported-software/l/librttopo.md index 01bdc404c..a10c8ba09 100644 --- a/docs/version-specific/supported-software/l/librttopo.md +++ b/docs/version-specific/supported-software/l/librttopo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # librttopo The RT Topology Library exposes an API to create and manage standard (ISO 13249 aka SQL/MM) topologies using user-provided data stores. @@ -7,3 +11,6 @@ The RT Topology Library exposes an API to create and manage standard (ISO 13249 version | toolchain --------|---------- ``1.1.0`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libsamplerate.md b/docs/version-specific/supported-software/l/libsamplerate.md index b9eb65e1d..832ca705b 100644 --- a/docs/version-specific/supported-software/l/libsamplerate.md +++ b/docs/version-specific/supported-software/l/libsamplerate.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libsamplerate Secret Rabbit Code (aka libsamplerate) is a Sample Rate Converter for audio. @@ -7,3 +11,6 @@ Secret Rabbit Code (aka libsamplerate) is a Sample Rate Converter for audio. version | toolchain --------|---------- ``0.1.9`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libsigc++.md b/docs/version-specific/supported-software/l/libsigc++.md index 5c01bf61f..bc1319a38 100644 --- a/docs/version-specific/supported-software/l/libsigc++.md +++ b/docs/version-specific/supported-software/l/libsigc++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libsigc++ The libsigc++ package implements a typesafe callback system for standard C++. @@ -13,3 +17,6 @@ version | toolchain ``2.10.8`` | ``GCCcore/10.3.0`` ``2.12.1`` | ``GCCcore/11.3.0`` ``3.4.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libsigsegv.md b/docs/version-specific/supported-software/l/libsigsegv.md index 203e32a7f..a4c6d1302 100644 --- a/docs/version-specific/supported-software/l/libsigsegv.md +++ b/docs/version-specific/supported-software/l/libsigsegv.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libsigsegv GNU libsigsegv is a library for handling page faults in user mode. @@ -10,3 +14,6 @@ version | toolchain ``2.12`` | ``GCCcore/9.3.0`` ``2.13`` | ``GCCcore/10.2.0`` ``2.14`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libsndfile.md b/docs/version-specific/supported-software/l/libsndfile.md index cbc4e3fc5..b36697d0a 100644 --- a/docs/version-specific/supported-software/l/libsndfile.md +++ b/docs/version-specific/supported-software/l/libsndfile.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libsndfile Libsndfile is a C library for reading and writing files containing sampled sound (such as MS Windows WAV and the Apple/SGI AIFF format) through one standard library interface. @@ -18,3 +22,6 @@ version | toolchain ``1.1.0`` | ``GCCcore/11.3.0`` ``1.2.0`` | ``GCCcore/12.2.0`` ``1.2.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libsodium.md b/docs/version-specific/supported-software/l/libsodium.md index a40c848e9..ec2a38439 100644 --- a/docs/version-specific/supported-software/l/libsodium.md +++ b/docs/version-specific/supported-software/l/libsodium.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libsodium Sodium is a modern, easy-to-use software library for encryption, decryption, signatures, password hashing and more. @@ -26,3 +30,6 @@ version | toolchain ``1.0.19`` | ``GCCcore/13.2.0`` ``1.0.6`` | ``intel/2016a`` ``1.0.8`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libspatialindex.md b/docs/version-specific/supported-software/l/libspatialindex.md index c1f5afea4..7979d8b97 100644 --- a/docs/version-specific/supported-software/l/libspatialindex.md +++ b/docs/version-specific/supported-software/l/libspatialindex.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libspatialindex C++ implementation of R*-tree, an MVR-tree and a TPR-tree with C API @@ -16,3 +20,6 @@ version | toolchain ``1.9.3`` | ``GCCcore/12.2.0`` ``1.9.3`` | ``GCCcore/12.3.0`` ``1.9.3`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libspatialite.md b/docs/version-specific/supported-software/l/libspatialite.md index 6ce72b4ff..7590597d8 100644 --- a/docs/version-specific/supported-software/l/libspatialite.md +++ b/docs/version-specific/supported-software/l/libspatialite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libspatialite SpatiaLite is an open source library intended to extend the SQLite core to support fully fledged Spatial SQL capabilities. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``4.3.0a`` | ``-Python-3.7.2`` | ``foss/2019a`` ``4.3.0a`` | | ``intel/2016b`` ``5.0.1`` | | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libspectre.md b/docs/version-specific/supported-software/l/libspectre.md index 4373b7069..8ef18837f 100644 --- a/docs/version-specific/supported-software/l/libspectre.md +++ b/docs/version-specific/supported-software/l/libspectre.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libspectre libspectre is a small library for rendering Postscript documents. It provides a convenient easy to use API for handling and rendering Postscript documents. @@ -7,3 +11,6 @@ libspectre is a small library for rendering Postscript documents. It provides a version | toolchain --------|---------- ``0.2.12`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libssh.md b/docs/version-specific/supported-software/l/libssh.md index f52b83774..ceef06d81 100644 --- a/docs/version-specific/supported-software/l/libssh.md +++ b/docs/version-specific/supported-software/l/libssh.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libssh Multiplatform C library implementing the SSHv2 protocol on client and server side @@ -7,3 +11,6 @@ Multiplatform C library implementing the SSHv2 protocol on client and server sid version | toolchain --------|---------- ``0.9.0`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libsupermesh.md b/docs/version-specific/supported-software/l/libsupermesh.md index 028eb6d2a..8806cdaec 100644 --- a/docs/version-specific/supported-software/l/libsupermesh.md +++ b/docs/version-specific/supported-software/l/libsupermesh.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libsupermesh libsupermesh parallel supermeshing library. @@ -7,3 +11,6 @@ libsupermesh parallel supermeshing library. version | toolchain --------|---------- ``2025-01-25`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libtar.md b/docs/version-specific/supported-software/l/libtar.md index b53dd704d..1f3187eb5 100644 --- a/docs/version-specific/supported-software/l/libtar.md +++ b/docs/version-specific/supported-software/l/libtar.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libtar C library for manipulating POSIX tar files @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.2.20`` | ``GCCcore/7.3.0`` ``1.2.20`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libtasn1.md b/docs/version-specific/supported-software/l/libtasn1.md index 93da56b75..8d694eaca 100644 --- a/docs/version-specific/supported-software/l/libtasn1.md +++ b/docs/version-specific/supported-software/l/libtasn1.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libtasn1 Libtasn1 is the ASN.1 library used by GnuTLS, GNU Shishi and some other packages. It was written by Fabio Fiorina, and has been shipped as part of GnuTLS for some time but is now a proper GNU package. @@ -18,3 +22,6 @@ version | toolchain ``4.7`` | ``GNU/4.9.3-2.25`` ``4.7`` | ``foss/2016a`` ``4.7`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libtecla.md b/docs/version-specific/supported-software/l/libtecla.md index 7ddd1e660..3c6e08967 100644 --- a/docs/version-specific/supported-software/l/libtecla.md +++ b/docs/version-specific/supported-software/l/libtecla.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libtecla The tecla library provides UNIX and LINUX programs with interactive command line editing facilities, similar to those of the UNIX tcsh shell. In addition to simple command-line editing, it supports recall of previously entered command lines, TAB completion of file names or other tokens, and in-line wild-card expansion of filenames. The internal functions which perform file-name completion and wild-card expansion are also available externally for optional use by programs. @@ -7,3 +11,6 @@ The tecla library provides UNIX and LINUX programs with interactive command line version | toolchain --------|---------- ``1.6.3`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libtirpc.md b/docs/version-specific/supported-software/l/libtirpc.md index 300bb172a..2c5627009 100644 --- a/docs/version-specific/supported-software/l/libtirpc.md +++ b/docs/version-specific/supported-software/l/libtirpc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libtirpc Libtirpc is a port of Suns Transport-Independent RPC library to Linux. @@ -17,3 +21,6 @@ version | toolchain ``1.3.3`` | ``GCCcore/12.2.0`` ``1.3.3`` | ``GCCcore/12.3.0`` ``1.3.4`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libtool.md b/docs/version-specific/supported-software/l/libtool.md index dfd57b3b6..fe8136d01 100644 --- a/docs/version-specific/supported-software/l/libtool.md +++ b/docs/version-specific/supported-software/l/libtool.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libtool GNU libtool is a generic library support script. Libtool hides the complexity of using shared libraries behind a consistent, portable interface. @@ -54,3 +58,6 @@ version | toolchain ``2.4.7`` | ``GCCcore/13.2.0`` ``2.4.7`` | ``GCCcore/13.3.0`` ``2.4.7`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libtree.md b/docs/version-specific/supported-software/l/libtree.md index e59d9b93b..64ecb7872 100644 --- a/docs/version-specific/supported-software/l/libtree.md +++ b/docs/version-specific/supported-software/l/libtree.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libtree libtree is a tool that turns ldd into a tree, explains why shared libraries are found and why not and optionally deploys executables and dependencies into a single directory @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.0.0`` | ``GCCcore/10.3.0`` ``3.0.3`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libunistring.md b/docs/version-specific/supported-software/l/libunistring.md index f70451f10..48f126c30 100644 --- a/docs/version-specific/supported-software/l/libunistring.md +++ b/docs/version-specific/supported-software/l/libunistring.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libunistring This library provides functions for manipulating Unicode strings and for manipulating C strings according to the Unicode standard. @@ -24,3 +28,6 @@ version | toolchain ``1.0`` | ``GCCcore/11.3.0`` ``1.1`` | ``GCCcore/10.2.0`` ``1.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libunwind.md b/docs/version-specific/supported-software/l/libunwind.md index 55178ba4c..1815eda4a 100644 --- a/docs/version-specific/supported-software/l/libunwind.md +++ b/docs/version-specific/supported-software/l/libunwind.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libunwind The primary goal of libunwind is to define a portable and efficient C programming interface (API) to determine the call-chain of a program. The API additionally provides the means to manipulate the preserved (callee-saved) state of each call-frame and to resume execution at any point in the call-chain (non-local goto). The API supports both local (same-process) and remote (across-process) operation. As such, the API is useful in a number of applications @@ -24,3 +28,6 @@ version | toolchain ``1.6.2`` | ``GCCcore/12.2.0`` ``1.6.2`` | ``GCCcore/12.3.0`` ``1.6.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libutempter.md b/docs/version-specific/supported-software/l/libutempter.md index cf8ad4174..45dba359a 100644 --- a/docs/version-specific/supported-software/l/libutempter.md +++ b/docs/version-specific/supported-software/l/libutempter.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libutempter libutempter is library that provides an interface for terminal emulators such as screen and xterm to record user sessions to utmp and wtmp files. @@ -7,3 +11,6 @@ libutempter is library that provides an interface for terminal emulators such a version | toolchain --------|---------- ``1.1.6.2`` | ``GCC/6.4.0-2.28`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libuv.md b/docs/version-specific/supported-software/l/libuv.md index 179b72d08..849ec4cb9 100644 --- a/docs/version-specific/supported-software/l/libuv.md +++ b/docs/version-specific/supported-software/l/libuv.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libuv libuv is a multi-platform support library with a focus on asynchronous I/O. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.37.0`` | ``GCCcore/8.3.0`` ``1.48.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libvdwxc.md b/docs/version-specific/supported-software/l/libvdwxc.md index d4580fc05..82cbffc72 100644 --- a/docs/version-specific/supported-software/l/libvdwxc.md +++ b/docs/version-specific/supported-software/l/libvdwxc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libvdwxc libvdwxc is a general library for evaluating energy and potential for exchange-correlation (XC) functionals from the vdW-DF family that can be used with various of density functional theory (DFT) codes. @@ -18,3 +22,6 @@ version | toolchain ``0.4.0`` | ``intel/2020b`` ``0.4.0`` | ``intel/2021a`` ``0.4.0`` | ``intel/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libvorbis.md b/docs/version-specific/supported-software/l/libvorbis.md index ba13c8553..c88d3767a 100644 --- a/docs/version-specific/supported-software/l/libvorbis.md +++ b/docs/version-specific/supported-software/l/libvorbis.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libvorbis Ogg Vorbis is a fully open, non-proprietary, patent-and-royalty-free, general-purpose compressed audio format @@ -12,3 +16,6 @@ version | toolchain ``1.3.7`` | ``GCCcore/11.3.0`` ``1.3.7`` | ``GCCcore/12.2.0`` ``1.3.7`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libvori.md b/docs/version-specific/supported-software/l/libvori.md index 2f683c7c7..c8c8f2ed1 100644 --- a/docs/version-specific/supported-software/l/libvori.md +++ b/docs/version-specific/supported-software/l/libvori.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libvori C++ library implementing the Voronoi integration as well as the compressed bqb file format. The present version of libvori is a very early development version, which is hard-coded to work with the CP2k program package. @@ -9,3 +13,6 @@ version | toolchain ``220621`` | ``GCCcore/11.3.0`` ``220621`` | ``GCCcore/12.2.0`` ``220621`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libwebp.md b/docs/version-specific/supported-software/l/libwebp.md index 062eb3f87..0a6d37c95 100644 --- a/docs/version-specific/supported-software/l/libwebp.md +++ b/docs/version-specific/supported-software/l/libwebp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libwebp WebP is a modern image format that provides superior lossless and lossy compression for images on the web. Using WebP, webmasters and web developers can create smaller, richer images that make the web faster. @@ -18,3 +22,6 @@ version | toolchain ``1.3.1`` | ``GCCcore/12.2.0`` ``1.3.1`` | ``GCCcore/12.3.0`` ``1.3.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libwpe.md b/docs/version-specific/supported-software/l/libwpe.md index bd49e5cc8..c79ae0d05 100644 --- a/docs/version-specific/supported-software/l/libwpe.md +++ b/docs/version-specific/supported-software/l/libwpe.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libwpe WPE is the reference WebKit port for embedded and low-consumption computer devices. It has been designed from the ground-up with performance, small footprint, accelerated content rendering, and simplicity of deployment in mind, bringing the excellence of the WebKit engine to countless platforms and target devices. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.13.3`` | ``GCCcore/11.2.0`` ``1.14.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libxc.md b/docs/version-specific/supported-software/l/libxc.md index cc87091fa..e3b03f960 100644 --- a/docs/version-specific/supported-software/l/libxc.md +++ b/docs/version-specific/supported-software/l/libxc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libxc Libxc is a library of exchange-correlation functionals for density-functional theory. The aim is to provide a portable, well tested and reliable set of exchange and correlation functionals. @@ -67,3 +71,6 @@ version | toolchain ``6.2.2`` | ``GCC/13.2.0`` ``6.2.2`` | ``intel-compilers/2023.1.0`` ``6.2.2`` | ``intel-compilers/2023.2.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libxcb.md b/docs/version-specific/supported-software/l/libxcb.md index 1e2cd07cf..9db8c48f8 100644 --- a/docs/version-specific/supported-software/l/libxcb.md +++ b/docs/version-specific/supported-software/l/libxcb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libxcb The X protocol C-language Binding (XCB) is a replacement for Xlib featuring a small footprint, latency hiding, direct access to the protocol, improved threading support, and extensibility. @@ -10,3 +14,6 @@ version | toolchain ``1.11.1`` | ``gimkl/2.11.5`` ``1.11.1`` | ``intel/2016a`` ``1.13`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libxkbcommon.md b/docs/version-specific/supported-software/l/libxkbcommon.md index 5f0f848ce..ff8b2689f 100644 --- a/docs/version-specific/supported-software/l/libxkbcommon.md +++ b/docs/version-specific/supported-software/l/libxkbcommon.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libxkbcommon xkbcommon is a library to handle keyboard descriptions, including loading them from disk, parsing them and handling their state. It's mainly meant for client toolkits, window systems, and other system applications. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.6.1`` | ``foss/2016a`` ``0.6.1`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libxml++.md b/docs/version-specific/supported-software/l/libxml++.md index 048f72275..06189cab7 100644 --- a/docs/version-specific/supported-software/l/libxml++.md +++ b/docs/version-specific/supported-software/l/libxml++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libxml++ libxml++ is a C++ wrapper for the libxml XML parser library. @@ -10,3 +14,6 @@ version | toolchain ``2.40.1`` | ``GCCcore/8.2.0`` ``2.40.1`` | ``GCCcore/8.3.0`` ``2.42.1`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libxml2-python.md b/docs/version-specific/supported-software/l/libxml2-python.md index 649d299e2..2a1ac6687 100644 --- a/docs/version-specific/supported-software/l/libxml2-python.md +++ b/docs/version-specific/supported-software/l/libxml2-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libxml2-python Libxml2 is the XML C parser and toolchain developed for the Gnome project (but usable outside of the Gnome platform). This is the Python binding. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``2.9.7`` | ``-Python-2.7.14`` | ``intel/2018a`` ``2.9.8`` | ``-Python-3.7.2`` | ``GCCcore/8.2.0`` ``2.9.8`` | ``-Python-2.7.15`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libxml2.md b/docs/version-specific/supported-software/l/libxml2.md index 8bb52c2f3..4b354620d 100644 --- a/docs/version-specific/supported-software/l/libxml2.md +++ b/docs/version-specific/supported-software/l/libxml2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libxml2 Libxml2 is the XML C parser and toolchain developed for the Gnome project (but usable outside of the Gnome platform). @@ -48,3 +52,6 @@ version | versionsuffix | toolchain ``2.9.8`` | | ``GCCcore/7.3.0`` ``2.9.8`` | | ``GCCcore/8.2.0`` ``2.9.9`` | | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libxslt.md b/docs/version-specific/supported-software/l/libxslt.md index aa7434418..4b9c3b8d8 100644 --- a/docs/version-specific/supported-software/l/libxslt.md +++ b/docs/version-specific/supported-software/l/libxslt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libxslt Libxslt is the XSLT C library developed for the GNOME project (but usable outside of the Gnome platform). @@ -26,3 +30,6 @@ version | versionsuffix | toolchain ``1.1.37`` | | ``GCCcore/12.2.0`` ``1.1.38`` | | ``GCCcore/12.3.0`` ``1.1.38`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libxsmm.md b/docs/version-specific/supported-software/l/libxsmm.md index 9ae04b231..38a5f4ee8 100644 --- a/docs/version-specific/supported-software/l/libxsmm.md +++ b/docs/version-specific/supported-software/l/libxsmm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libxsmm LIBXSMM is a library for small dense and small sparse matrix-matrix multiplications targeting Intel Architecture (x86). @@ -28,3 +32,6 @@ version | toolchain ``1.8.2`` | ``intel/2017b`` ``1.8.3`` | ``foss/2018a`` ``1.8.3`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libyaml.md b/docs/version-specific/supported-software/l/libyaml.md index 1650d924e..59d375673 100644 --- a/docs/version-specific/supported-software/l/libyaml.md +++ b/docs/version-specific/supported-software/l/libyaml.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libyaml LibYAML is a YAML parser and emitter written in C. @@ -27,3 +31,6 @@ version | toolchain ``0.2.5`` | ``GCCcore/12.3.0`` ``0.2.5`` | ``GCCcore/13.2.0`` ``0.2.5`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libzeep.md b/docs/version-specific/supported-software/l/libzeep.md index 4aa84aa11..ecf4d7438 100644 --- a/docs/version-specific/supported-software/l/libzeep.md +++ b/docs/version-specific/supported-software/l/libzeep.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libzeep Libzeep was originally developed to make it easy to create SOAP servers. @@ -7,3 +11,6 @@ Libzeep was originally developed to make it easy to create SOAP servers. version | toolchain --------|---------- ``5.0.1`` | ``gompi/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/libzip.md b/docs/version-specific/supported-software/l/libzip.md index a9e33c604..06823028d 100644 --- a/docs/version-specific/supported-software/l/libzip.md +++ b/docs/version-specific/supported-software/l/libzip.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # libzip libzip is a C library for reading, creating, and modifying zip archives. @@ -11,3 +15,6 @@ version | toolchain ``1.7.3`` | ``GCCcore/10.3.0`` ``1.7.3`` | ``GCCcore/11.2.0`` ``1.9.2`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lie_learn.md b/docs/version-specific/supported-software/l/lie_learn.md index c28af0a78..3c19126c0 100644 --- a/docs/version-specific/supported-software/l/lie_learn.md +++ b/docs/version-specific/supported-software/l/lie_learn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lie_learn lie_learn is a python package that knows how to do various tricky computations related to Lie groups and manifolds (mainly the sphere S2 and rotation group SO3). @@ -7,3 +11,6 @@ lie_learn is a python package that knows how to do various tricky computations r version | versionsuffix | toolchain --------|---------------|---------- ``0.0.1.post1`` | ``-Python-3.7.4`` | ``fosscuda/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lifelines.md b/docs/version-specific/supported-software/l/lifelines.md index 7a16056f3..740d2687b 100644 --- a/docs/version-specific/supported-software/l/lifelines.md +++ b/docs/version-specific/supported-software/l/lifelines.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lifelines lifelines is a pure Python implementation of the best parts of survival analysis @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.22.8`` | ``-Python-3.7.2`` | ``fosscuda/2019a`` ``0.26.3`` | | ``fosscuda/2020b`` ``0.27.4`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/liknorm.md b/docs/version-specific/supported-software/l/liknorm.md index 10a4bac20..257bb5c58 100644 --- a/docs/version-specific/supported-software/l/liknorm.md +++ b/docs/version-specific/supported-software/l/liknorm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # liknorm Moments of the product of an exponential-family likelihood with a Normal distribution. @@ -7,3 +11,6 @@ Moments of the product of an exponential-family likelihood with a Normal distrib version | toolchain --------|---------- ``1.5.2`` | ``GCCcore/7.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/likwid.md b/docs/version-specific/supported-software/l/likwid.md index 514cfb3ce..9562c2c9d 100644 --- a/docs/version-specific/supported-software/l/likwid.md +++ b/docs/version-specific/supported-software/l/likwid.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # likwid Likwid stands for Like I knew what I am doing. This project contributes easy to use command line tools for Linux to support programmers in developing high performance multi threaded programs. @@ -26,3 +30,6 @@ version | toolchain ``5.2.2`` | ``GCC/12.3.0`` ``5.3.0`` | ``GCC/12.3.0`` ``5.3.0`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lil-aretomo.md b/docs/version-specific/supported-software/l/lil-aretomo.md index 0fc03197f..6ff87b917 100644 --- a/docs/version-specific/supported-software/l/lil-aretomo.md +++ b/docs/version-specific/supported-software/l/lil-aretomo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lil-aretomo A lightweight Python API for AreTomo. @@ -7,3 +11,6 @@ A lightweight Python API for AreTomo. version | toolchain --------|---------- ``0.1.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/limix.md b/docs/version-specific/supported-software/l/limix.md index c5bdad504..e05545767 100644 --- a/docs/version-specific/supported-software/l/limix.md +++ b/docs/version-specific/supported-software/l/limix.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # limix Limix is a flexible and efficient linear mixed model library with interfaces to Python. Genomic analyses require flexible models that can be adapted to the needs of the user. Limix is smart about how particular models are fitted to save computational cost. @@ -7,3 +11,6 @@ Limix is a flexible and efficient linear mixed model library with interfaces to version | versionsuffix | toolchain --------|---------------|---------- ``2.0.4`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/line_profiler.md b/docs/version-specific/supported-software/l/line_profiler.md index 8b39f1b99..fdb358f9a 100644 --- a/docs/version-specific/supported-software/l/line_profiler.md +++ b/docs/version-specific/supported-software/l/line_profiler.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # line_profiler line_profiler is a module for doing line-by-line profiling of functions. kernprof is a convenient script for running either line_profiler or the Python standard library's cProfile or profile modules, depending on what is available. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``4.0.0`` | | ``foss/2022a`` ``4.1.1`` | | ``GCCcore/12.2.0`` ``4.1.2`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lit.md b/docs/version-specific/supported-software/l/lit.md index f9fd4f4e3..5c28d959c 100644 --- a/docs/version-specific/supported-software/l/lit.md +++ b/docs/version-specific/supported-software/l/lit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lit lit is a portable tool for executing LLVM and Clang style test suites, summarizing their results, and providing indication of failures. @@ -7,3 +11,6 @@ lit is a portable tool for executing LLVM and Clang style test suites, summarizi version | toolchain --------|---------- ``18.1.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lmoments3.md b/docs/version-specific/supported-software/l/lmoments3.md index 2440a4af1..310db4782 100644 --- a/docs/version-specific/supported-software/l/lmoments3.md +++ b/docs/version-specific/supported-software/l/lmoments3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lmoments3 Estimate linear moments for statistical distribution functions. @@ -7,3 +11,6 @@ Estimate linear moments for statistical distribution functions. version | toolchain --------|---------- ``1.0.6`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/logaddexp.md b/docs/version-specific/supported-software/l/logaddexp.md index 8a8d5144a..da28c5701 100644 --- a/docs/version-specific/supported-software/l/logaddexp.md +++ b/docs/version-specific/supported-software/l/logaddexp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # logaddexp C library that implements the logarithm of the sum of exponentiations. Inspired by NumPy's logaddexp function. @@ -7,3 +11,6 @@ C library that implements the logarithm of the sum of exponentiations. Inspired version | toolchain --------|---------- ``1.0.3`` | ``GCCcore/7.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/longestrunsubsequence.md b/docs/version-specific/supported-software/l/longestrunsubsequence.md index 5c2dd6e64..0d9e617a8 100644 --- a/docs/version-specific/supported-software/l/longestrunsubsequence.md +++ b/docs/version-specific/supported-software/l/longestrunsubsequence.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # longestrunsubsequence Implementation of a solver for the Longest Run Subsequence Problem. Given a sequence as input, compute a longest subsequence such that there is at most one run for every character. @@ -7,3 +11,6 @@ Implementation of a solver for the Longest Run Subsequence Problem. Given a seq version | toolchain --------|---------- ``1.0.1`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/longread_umi.md b/docs/version-specific/supported-software/l/longread_umi.md index 2095a3e2f..4892b3043 100644 --- a/docs/version-specific/supported-software/l/longread_umi.md +++ b/docs/version-specific/supported-software/l/longread_umi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # longread_umi A collection of scripts for processing longread UMI data. @@ -7,3 +11,6 @@ A collection of scripts for processing longread UMI data. version | toolchain --------|---------- ``0.3.2`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/loomR.md b/docs/version-specific/supported-software/l/loomR.md index 3ba5098b8..ead969017 100644 --- a/docs/version-specific/supported-software/l/loomR.md +++ b/docs/version-specific/supported-software/l/loomR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # loomR An R interface for loom files @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.2.0-20180425`` | ``-R-4.2.1`` | ``foss/2022a`` ``0.2.0-20180425`` | ``-R-4.2.2`` | ``foss/2022b`` ``0.2.0-20180425`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/loompy.md b/docs/version-specific/supported-software/l/loompy.md index a6189a527..c4c172a14 100644 --- a/docs/version-specific/supported-software/l/loompy.md +++ b/docs/version-specific/supported-software/l/loompy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # loompy Python implementation of the Loom file format, an efficient file format for large omics datasets @@ -12,3 +16,6 @@ version | toolchain ``3.0.7`` | ``foss/2022a`` ``3.0.7`` | ``foss/2023a`` ``3.0.7`` | ``intel/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lpsolve.md b/docs/version-specific/supported-software/l/lpsolve.md index fd5f9508b..7846d493c 100644 --- a/docs/version-specific/supported-software/l/lpsolve.md +++ b/docs/version-specific/supported-software/l/lpsolve.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lpsolve Mixed Integer Linear Programming (MILP) solver @@ -20,3 +24,6 @@ version | toolchain ``5.5.2.5`` | ``iccifort/2019.5.281`` ``5.5.2.5`` | ``intel/2017a`` ``5.5.2.5`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lrslib.md b/docs/version-specific/supported-software/l/lrslib.md index 198142dfe..7f5893836 100644 --- a/docs/version-specific/supported-software/l/lrslib.md +++ b/docs/version-specific/supported-software/l/lrslib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lrslib lrslib is a self-contained ANSI C implementation of the reverse search algorithm for vertex enumeration/convex hull problems @@ -10,3 +14,6 @@ version | toolchain ``7.0a`` | ``gompi/2019a`` ``7.2`` | ``gompi/2022a`` ``7.2`` | ``gompi/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lwgrp.md b/docs/version-specific/supported-software/l/lwgrp.md index 06f260cfc..bed01dbf6 100644 --- a/docs/version-specific/supported-software/l/lwgrp.md +++ b/docs/version-specific/supported-software/l/lwgrp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lwgrp The Light-weight Group Library provides methods for MPI codes to quickly create and destroy process groups @@ -13,3 +17,6 @@ version | toolchain ``1.0.3`` | ``gompi/2020b`` ``1.0.5`` | ``gompi/2022a`` ``1.0.5`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lxml.md b/docs/version-specific/supported-software/l/lxml.md index 9e0588ead..c0b0fec60 100644 --- a/docs/version-specific/supported-software/l/lxml.md +++ b/docs/version-specific/supported-software/l/lxml.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lxml The lxml XML toolkit is a Pythonic binding for the C libraries libxml2 and libxslt. @@ -27,3 +31,6 @@ version | versionsuffix | toolchain ``4.9.2`` | | ``GCCcore/12.2.0`` ``4.9.2`` | | ``GCCcore/12.3.0`` ``4.9.3`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lynx.md b/docs/version-specific/supported-software/l/lynx.md index 640418381..c2c85978f 100644 --- a/docs/version-specific/supported-software/l/lynx.md +++ b/docs/version-specific/supported-software/l/lynx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lynx lynx is an alphanumeric display oriented World-Wide Web Client @@ -7,3 +11,6 @@ lynx is an alphanumeric display oriented World-Wide Web Client version | versionsuffix | toolchain --------|---------------|---------- ``2.8.9`` | ``-develop`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/l/lz4.md b/docs/version-specific/supported-software/l/lz4.md index c18e4288a..1d95a27ab 100644 --- a/docs/version-specific/supported-software/l/lz4.md +++ b/docs/version-specific/supported-software/l/lz4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # lz4 LZ4 is lossless compression algorithm, providing compression speed at 400 MB/s per core. It features an extremely fast decoder, with speed in multiple GB/s per core. @@ -20,3 +24,6 @@ version | toolchain ``1.9.4`` | ``GCCcore/12.3.0`` ``1.9.4`` | ``GCCcore/13.2.0`` ``1.9.4`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/M1QN3.md b/docs/version-specific/supported-software/m/M1QN3.md index efc74d306..0a068124b 100644 --- a/docs/version-specific/supported-software/m/M1QN3.md +++ b/docs/version-specific/supported-software/m/M1QN3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # M1QN3 A solver of large-scale unconstrained minimization problems @@ -7,3 +11,6 @@ A solver of large-scale unconstrained minimization problems version | toolchain --------|---------- ``3.3`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/M3GNet.md b/docs/version-specific/supported-software/m/M3GNet.md index 4cb73d3a8..1b2cf1a1e 100644 --- a/docs/version-specific/supported-software/m/M3GNet.md +++ b/docs/version-specific/supported-software/m/M3GNet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # M3GNet " M3GNet is a new materials graph neural network architecture that incorporates 3-body interactions. A key difference with prior materials graph implementations such as MEGNet is the addition of the coordinates for atoms and the 3×3 lattice matrix in crystals, which are necessary for obtaining tensorial quantities such as forces and stresses via auto-differentiation. @@ -7,3 +11,6 @@ version | toolchain --------|---------- ``0.2.4`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/M4.md b/docs/version-specific/supported-software/m/M4.md index ef840c96b..0a8fc8f2f 100644 --- a/docs/version-specific/supported-software/m/M4.md +++ b/docs/version-specific/supported-software/m/M4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # M4 GNU M4 is an implementation of the traditional Unix macro processor. It is mostly SVR4 compatible although it has some extensions (for example, handling more than 9 positional parameters to macros). GNU M4 also has built-in functions for including files, running shell commands, doing arithmetic, etc. @@ -75,3 +79,6 @@ version | toolchain ``1.4.19`` | ``GCCcore/9.4.0`` ``1.4.19`` | ``GCCcore/9.5.0`` ``1.4.19`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MACH.md b/docs/version-specific/supported-software/m/MACH.md index 3a2875c72..03003a33d 100644 --- a/docs/version-specific/supported-software/m/MACH.md +++ b/docs/version-specific/supported-software/m/MACH.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MACH MACH 1.0 is a Markov Chain based haplotyper that can resolve long haplotypes or infer missing genotypes in samples of unrelated individuals. @@ -7,3 +11,6 @@ MACH 1.0 is a Markov Chain based haplotyper that can resolve long haplotypes or version | toolchain --------|---------- ``1.0.18`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MACS2.md b/docs/version-specific/supported-software/m/MACS2.md index 7233a1695..a0da1dc9f 100644 --- a/docs/version-specific/supported-software/m/MACS2.md +++ b/docs/version-specific/supported-software/m/MACS2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MACS2 Model Based Analysis for ChIP-Seq data @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``2.2.9.1`` | | ``foss/2022a`` ``2.2.9.1`` | | ``foss/2022b`` ``2.2.9.1`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MACS3.md b/docs/version-specific/supported-software/m/MACS3.md index d53783477..97aae865b 100644 --- a/docs/version-specific/supported-software/m/MACS3.md +++ b/docs/version-specific/supported-software/m/MACS3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MACS3 Model Based Analysis for ChIP-Seq data @@ -10,3 +14,6 @@ version | toolchain ``3.0.0b2`` | ``foss/2022b`` ``3.0.1`` | ``foss/2022b`` ``3.0.1`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MACSE.md b/docs/version-specific/supported-software/m/MACSE.md index 1677ba269..9976b8f6d 100644 --- a/docs/version-specific/supported-software/m/MACSE.md +++ b/docs/version-specific/supported-software/m/MACSE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MACSE MACSE aligns coding NT sequences with respect to their AA translation while allowing NT sequences to contain multiple frameshifts and/or stop codons. MACSE is hence the first automatic solution to align protein-coding gene datasets containing non-functional sequences (pseudogenes) without disrupting the underlying codon structure. @@ -7,3 +11,6 @@ MACSE aligns coding NT sequences with respect to their AA translation while allo version | versionsuffix | toolchain --------|---------------|---------- ``2.06`` | ``-Java-15`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MAFFT.md b/docs/version-specific/supported-software/m/MAFFT.md index 6d7da1508..d495b43c3 100644 --- a/docs/version-specific/supported-software/m/MAFFT.md +++ b/docs/version-specific/supported-software/m/MAFFT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MAFFT MAFFT is a multiple sequence alignment program for unix-like operating systems. It offers a range of multiple alignment methods, L-INS-i (accurate; for alignment of <∼200 sequences), FFT-NS-2 (fast; for alignment of <∼10,000 sequences), etc. @@ -28,3 +32,6 @@ version | versionsuffix | toolchain ``7.505`` | ``-with-extensions`` | ``GCC/11.3.0`` ``7.505`` | ``-with-extensions`` | ``GCC/12.2.0`` ``7.520`` | ``-with-extensions`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MAGMA-gene-analysis.md b/docs/version-specific/supported-software/m/MAGMA-gene-analysis.md index 408a9c97e..e75be8f1c 100644 --- a/docs/version-specific/supported-software/m/MAGMA-gene-analysis.md +++ b/docs/version-specific/supported-software/m/MAGMA-gene-analysis.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MAGMA-gene-analysis MAGMA is a tool for gene analysis and generalized gene-set analysis of GWAS data. It can be used to analyse both raw genotype data as well as summary SNP p-values from a previous GWAS or meta-analysis. @@ -9,3 +13,6 @@ version | toolchain ``1.07b`` | ``foss/2018b`` ``1.07bb`` | ``GCC/8.3.0`` ``1.09b`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MAGeCK.md b/docs/version-specific/supported-software/m/MAGeCK.md index 9830869bf..6322dc931 100644 --- a/docs/version-specific/supported-software/m/MAGeCK.md +++ b/docs/version-specific/supported-software/m/MAGeCK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MAGeCK Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens (or GeCKO) technology. MAGeCK is developed by Wei Li and Han Xu from Dr. Xiaole Shirley Liu's lab at Dana-Farber Cancer Institute, and is being actively updated by Wei Li lab from Children's National Medical Center. @@ -9,3 +13,6 @@ version | toolchain ``0.5.9.4`` | ``foss/2021a`` ``0.5.9.4`` | ``foss/2022a`` ``0.5.9.5`` | ``gfbf/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MAJIQ.md b/docs/version-specific/supported-software/m/MAJIQ.md index 342632639..a3987a417 100644 --- a/docs/version-specific/supported-software/m/MAJIQ.md +++ b/docs/version-specific/supported-software/m/MAJIQ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MAJIQ MAJIQ and Voila are two software packages that together detect, quantify, and visualize local splicing variations (LSV) from RNA-Seq data. @@ -7,3 +11,6 @@ MAJIQ and Voila are two software packages that together detect, quantify, and vi version | versionsuffix | toolchain --------|---------------|---------- ``1.1.1`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MAKER.md b/docs/version-specific/supported-software/m/MAKER.md index 0622adcf8..98a2307f6 100644 --- a/docs/version-specific/supported-software/m/MAKER.md +++ b/docs/version-specific/supported-software/m/MAKER.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MAKER MAKER is a portable and easily configurable genome annotation pipeline. Its purpose is to allow smaller eukaryotic and prokaryotic genome projects to independently annotate their genomes and to create genome databases. @@ -7,3 +11,6 @@ MAKER is a portable and easily configurable genome annotation pipeline. Its purp version | toolchain --------|---------- ``3.01.04`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MARS.md b/docs/version-specific/supported-software/m/MARS.md index c4fca4816..bf62f50d1 100644 --- a/docs/version-specific/supported-software/m/MARS.md +++ b/docs/version-specific/supported-software/m/MARS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MARS improving Multiple circular sequence Alignment using Refined Sequences @@ -7,3 +11,6 @@ improving Multiple circular sequence Alignment using Refined Sequences version | toolchain --------|---------- ``20191101`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MATIO.md b/docs/version-specific/supported-software/m/MATIO.md index 90e0401bb..0bbd1c9b5 100644 --- a/docs/version-specific/supported-software/m/MATIO.md +++ b/docs/version-specific/supported-software/m/MATIO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MATIO matio is an C library for reading and writing Matlab MAT files. @@ -18,3 +22,6 @@ version | toolchain ``1.5.26`` | ``GCCcore/12.3.0`` ``1.5.26`` | ``GCCcore/13.2.0`` ``1.5.9`` | ``GCCcore/5.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MATLAB-Engine.md b/docs/version-specific/supported-software/m/MATLAB-Engine.md index 1b30cada3..0c289e22d 100644 --- a/docs/version-specific/supported-software/m/MATLAB-Engine.md +++ b/docs/version-specific/supported-software/m/MATLAB-Engine.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MATLAB-Engine The MATLAB Engine API for Python provides a package for Python to call MATLAB as a computational engine. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``2019b`` | | ``GCCcore/8.3.0`` ``2021a-9.10.1`` | | ``GCCcore/10.2.0`` ``2021b-9.11.19`` | | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MATLAB.md b/docs/version-specific/supported-software/m/MATLAB.md index 6120a8103..4bb0acc43 100644 --- a/docs/version-specific/supported-software/m/MATLAB.md +++ b/docs/version-specific/supported-software/m/MATLAB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MATLAB MATLAB is a high-level language and interactive environment that enables you to perform computationally intensive tasks faster than with traditional programming languages such as C, C++, and Fortran. @@ -23,3 +27,6 @@ version | versionsuffix | toolchain ``2022b`` | | ``system`` ``2023a`` | | ``system`` ``2023b`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MATSim.md b/docs/version-specific/supported-software/m/MATSim.md index a10f8f684..972664f62 100644 --- a/docs/version-specific/supported-software/m/MATSim.md +++ b/docs/version-specific/supported-software/m/MATSim.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MATSim MATSim is an open-source framework to implement large-scale agent-based transport simulations. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``14.0`` | ``-Java-11`` | ``system`` ``15.0`` | ``-Java-17`` | ``GCCcore/12.3.0`` ``15.0`` | ``-Java-17`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MBROLA.md b/docs/version-specific/supported-software/m/MBROLA.md index d5df4fe80..5caac49ce 100644 --- a/docs/version-specific/supported-software/m/MBROLA.md +++ b/docs/version-specific/supported-software/m/MBROLA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MBROLA MBROLA is a speech synthesizer based on the concatenation of diphones. It takes a list of phonemes as input, together with prosodic information (duration of phonemes and a piecewise linear description of pitch), and produces speech samples on 16 bits (linear), at the sampling frequency of the diphone database. MBROLA voices project provides list of MBROLA speech synthesizer voices. It is intended to provide easier collaboration and automatic updates for individual users and packagers. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.3`` | ``-voices-20200330`` | ``GCCcore/12.3.0`` ``3.3`` | ``-voices-20200330`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MCL.md b/docs/version-specific/supported-software/m/MCL.md index 07e027bb2..cb5179c3f 100644 --- a/docs/version-specific/supported-software/m/MCL.md +++ b/docs/version-specific/supported-software/m/MCL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MCL The MCL algorithm is short for the Markov Cluster Algorithm, a fast and scalable unsupervised cluster algorithm for graphs (also known as networks) based on simulation of (stochastic) flow in graphs. @@ -19,3 +23,6 @@ version | versionsuffix | toolchain ``22.282`` | | ``GCCcore/11.2.0`` ``22.282`` | | ``GCCcore/11.3.0`` ``22.282`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MCR.md b/docs/version-specific/supported-software/m/MCR.md index b2fce0d53..1ef4493a2 100644 --- a/docs/version-specific/supported-software/m/MCR.md +++ b/docs/version-specific/supported-software/m/MCR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MCR The MATLAB Runtime is a standalone set of shared libraries that enables the execution of compiled MATLAB applications or components on computers that do not have MATLAB installed. @@ -29,3 +33,6 @@ version | versionsuffix | toolchain ``R2022a`` | ``.5`` | ``system`` ``R2022a`` | | ``system`` ``R2023a`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MDAnalysis.md b/docs/version-specific/supported-software/m/MDAnalysis.md index d0df99632..ad34c0087 100644 --- a/docs/version-specific/supported-software/m/MDAnalysis.md +++ b/docs/version-specific/supported-software/m/MDAnalysis.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MDAnalysis MDAnalysis is an object-oriented Python library to analyze trajectories from molecular dynamics (MD) simulations in many popular formats. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``2.4.2`` | | ``foss/2021a`` ``2.4.2`` | | ``foss/2022b`` ``2.7.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MDBM.md b/docs/version-specific/supported-software/m/MDBM.md index 51b346622..899d44992 100644 --- a/docs/version-specific/supported-software/m/MDBM.md +++ b/docs/version-specific/supported-software/m/MDBM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MDBM MDBM is a super-fast memory-mapped key/value store @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``4.13.0`` | ``GCCcore/6.4.0`` ``4.13.0`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MDI.md b/docs/version-specific/supported-software/m/MDI.md index 147db9054..b195bf14a 100644 --- a/docs/version-specific/supported-software/m/MDI.md +++ b/docs/version-specific/supported-software/m/MDI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MDI The MolSSI Driver Interface (MDI) project provides a standardized API for fast, on-the-fly communication between computational chemistry codes. This greatly simplifies the process of implementing methods that require the cooperation of multiple software packages and enables developers to write a single implementation that works across many different codes. The API is sufficiently general to support a wide variety of techniques, including QM/MM, ab initio MD, machine learning, advanced sampling, and path integral MD, while also being straightforwardly extensible. Communication between codes is handled by the MDI Library, which enables tight coupling between codes using either the MPI or TCP/IP methods. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.4.16`` | ``gompi/2022b`` ``1.4.26`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MDSplus-Java.md b/docs/version-specific/supported-software/m/MDSplus-Java.md index af6d59a74..175377453 100644 --- a/docs/version-specific/supported-software/m/MDSplus-Java.md +++ b/docs/version-specific/supported-software/m/MDSplus-Java.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MDSplus-Java MDSplus is a set of software tools for data acquisition and storage and a methodology for management of complex scientific data. @@ -7,3 +11,6 @@ MDSplus is a set of software tools for data acquisition and storage and a method version | versionsuffix | toolchain --------|---------------|---------- ``7.96.12`` | ``-Java-13`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MDSplus-Python.md b/docs/version-specific/supported-software/m/MDSplus-Python.md index b224d0b6b..d4388ca16 100644 --- a/docs/version-specific/supported-software/m/MDSplus-Python.md +++ b/docs/version-specific/supported-software/m/MDSplus-Python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MDSplus-Python MDSplus is a set of software tools for data acquisition and storage and a methodology for management of complex scientific data. @@ -7,3 +11,6 @@ MDSplus is a set of software tools for data acquisition and storage and a method version | versionsuffix | toolchain --------|---------------|---------- ``7.96.12`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MDSplus.md b/docs/version-specific/supported-software/m/MDSplus.md index 739d6fa43..8bd1aa08e 100644 --- a/docs/version-specific/supported-software/m/MDSplus.md +++ b/docs/version-specific/supported-software/m/MDSplus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MDSplus MDSplus is a set of software tools for data acquisition and storage and a methodology for management of complex scientific data. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``7.46.1`` | | ``foss/2018a`` ``7.96.12`` | | ``GCCcore/9.3.0`` ``7.96.8`` | | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MDTraj.md b/docs/version-specific/supported-software/m/MDTraj.md index 4e0e8b69a..bd42da0d6 100644 --- a/docs/version-specific/supported-software/m/MDTraj.md +++ b/docs/version-specific/supported-software/m/MDTraj.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MDTraj Read, write and analyze MD trajectories with only a few lines of Python code. @@ -21,3 +25,6 @@ version | versionsuffix | toolchain ``1.9.7`` | | ``intel/2021b`` ``1.9.7`` | | ``intel/2022a`` ``1.9.9`` | | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MEGA.md b/docs/version-specific/supported-software/m/MEGA.md index cc1ed197c..92e5c55d9 100644 --- a/docs/version-specific/supported-software/m/MEGA.md +++ b/docs/version-specific/supported-software/m/MEGA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MEGA MEGA-CC (Molecular Evolutionary Genetics Analysis Computational Core) is an integrated suite of tools for statistics-based comparative analysis of molecular sequence data based on evolutionary principles. @@ -9,3 +13,6 @@ version | toolchain ``10.0.5`` | ``system`` ``11.0.10`` | ``system`` ``7.0.20-1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MEGACC.md b/docs/version-specific/supported-software/m/MEGACC.md index eb036e465..3eb6697c3 100644 --- a/docs/version-specific/supported-software/m/MEGACC.md +++ b/docs/version-specific/supported-software/m/MEGACC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MEGACC MEGA-Computing Core - Sophisticated and user-friendly software suite for analyzing DNA and protein sequence data from species and populations. @@ -7,3 +11,6 @@ MEGA-Computing Core - Sophisticated and user-friendly software suite for analyzi version | toolchain --------|---------- ``7.0.18-1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MEGAHIT.md b/docs/version-specific/supported-software/m/MEGAHIT.md index dbbc400d7..9eeebaaf2 100644 --- a/docs/version-specific/supported-software/m/MEGAHIT.md +++ b/docs/version-specific/supported-software/m/MEGAHIT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MEGAHIT An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph @@ -21,3 +25,6 @@ version | versionsuffix | toolchain ``1.2.9`` | | ``GCCcore/12.3.0`` ``1.2.9`` | | ``GCCcore/9.3.0`` ``1.2.9`` | | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MEGAN.md b/docs/version-specific/supported-software/m/MEGAN.md index 6dda80793..33dbc662d 100644 --- a/docs/version-specific/supported-software/m/MEGAN.md +++ b/docs/version-specific/supported-software/m/MEGAN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MEGAN MEGAN is a comprehensive toolbox for interactively analyzing microbiome data @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``6.22.0`` | ``-Java-17`` | ``system`` ``6.25.3`` | ``-Java-17`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MEM.md b/docs/version-specific/supported-software/m/MEM.md index 649c1ddf6..367661258 100644 --- a/docs/version-specific/supported-software/m/MEM.md +++ b/docs/version-specific/supported-software/m/MEM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MEM Marker Enrichment Modeling (MEM) is a tool designed to calculate enrichment scores. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``20191023`` | | ``foss/2019b`` ``20191023`` | ``-R-4.0.0`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MEME.md b/docs/version-specific/supported-software/m/MEME.md index 3164306fa..7508fef77 100644 --- a/docs/version-specific/supported-software/m/MEME.md +++ b/docs/version-specific/supported-software/m/MEME.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MEME The MEME Suite allows you to: * discover motifs using MEME, DREME (DNA only) or GLAM2 on groups of related DNA or protein sequences, * search sequence databases with motifs using MAST, FIMO, MCAST or GLAM2SCAN, * compare a motif to all motifs in a database of motifs, * associate motifs with Gene Ontology terms via their putative target genes, and * analyse motif enrichment using SpaMo or CentriMo. @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``5.4.1`` | ``-Python-2.7.18`` | ``gompi/2021b`` ``5.4.1`` | | ``gompi/2021b`` ``5.5.4`` | | ``gompi/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MEMOTE.md b/docs/version-specific/supported-software/m/MEMOTE.md index 864d4283a..e00c04a02 100644 --- a/docs/version-specific/supported-software/m/MEMOTE.md +++ b/docs/version-specific/supported-software/m/MEMOTE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MEMOTE The genome-scale metabolic model test suite @@ -7,3 +11,6 @@ The genome-scale metabolic model test suite version | toolchain --------|---------- ``0.13.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MERCKX.md b/docs/version-specific/supported-software/m/MERCKX.md index ed3e15150..8986ec6d2 100644 --- a/docs/version-specific/supported-software/m/MERCKX.md +++ b/docs/version-specific/supported-software/m/MERCKX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MERCKX Multilingual Entity/Resource Combiner & Knowledge eXtractor @@ -7,3 +11,6 @@ Multilingual Entity/Resource Combiner & Knowledge eXtractor version | versionsuffix | toolchain --------|---------------|---------- ``20170330`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MESS.md b/docs/version-specific/supported-software/m/MESS.md index ea89732b1..fe584db83 100644 --- a/docs/version-specific/supported-software/m/MESS.md +++ b/docs/version-specific/supported-software/m/MESS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MESS Master Equation System Solver (MESS) @@ -7,3 +11,6 @@ Master Equation System Solver (MESS) version | toolchain --------|---------- ``0.1.6`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/METIS.md b/docs/version-specific/supported-software/m/METIS.md index 23963c507..ffd535e8e 100644 --- a/docs/version-specific/supported-software/m/METIS.md +++ b/docs/version-specific/supported-software/m/METIS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # METIS METIS is a set of serial programs for partitioning graphs, partitioning finite element meshes, and producing fill reducing orderings for sparse matrices. The algorithms implemented in METIS are based on the multilevel recursive-bisection, multilevel k-way, and multi-constraint partitioning schemes. @@ -31,3 +35,6 @@ version | versionsuffix | toolchain ``5.1.0`` | | ``intel/2016a`` ``5.1.0`` | | ``intel/2016b`` ``5.1.0`` | | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MICOM.md b/docs/version-specific/supported-software/m/MICOM.md index bb5503398..75023efa1 100644 --- a/docs/version-specific/supported-software/m/MICOM.md +++ b/docs/version-specific/supported-software/m/MICOM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MICOM Python package to study microbial communities using metabolic modeling. @@ -7,3 +11,6 @@ Python package to study microbial communities using metabolic modeling. version | toolchain --------|---------- ``0.33.2`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MIGRATE-N.md b/docs/version-specific/supported-software/m/MIGRATE-N.md index e0bf902ae..141007d91 100644 --- a/docs/version-specific/supported-software/m/MIGRATE-N.md +++ b/docs/version-specific/supported-software/m/MIGRATE-N.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MIGRATE-N Migrate estimates population parameters, effective population sizes and migration rates of n populations, using genetic data. It uses a coalescent theory approach taking into account history of mutations and uncertainty of the genealogy. @@ -9,3 +13,6 @@ version | toolchain ``4.2.14`` | ``foss/2018a`` ``4.2.8`` | ``foss/2016a`` ``5.0.4`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MINC.md b/docs/version-specific/supported-software/m/MINC.md index ffa9f6be2..0dfe96a71 100644 --- a/docs/version-specific/supported-software/m/MINC.md +++ b/docs/version-specific/supported-software/m/MINC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MINC Medical Image NetCDF or MINC isn't netCDF. @@ -9,3 +13,6 @@ version | toolchain ``2.4.03`` | ``foss/2017b`` ``2.4.03`` | ``foss/2018a`` ``2.4.03`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MINPACK.md b/docs/version-specific/supported-software/m/MINPACK.md index a642c3e7a..ca3da549d 100644 --- a/docs/version-specific/supported-software/m/MINPACK.md +++ b/docs/version-specific/supported-software/m/MINPACK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MINPACK Minpack includes software for solving nonlinear equations and nonlinear least squares problems. Five algorithmic paths each include a core subroutine and an easy-to-use driver. The algorithms proceed either from an analytic specification of the Jacobian matrix or directly from the problem functions. The paths include facilities for systems of equations with a banded Jacobian matrix, for least squares problems with a large amount of data, and for checking the consistency of the Jacobian matrix with the functions. @@ -7,3 +11,6 @@ Minpack includes software for solving nonlinear equations and nonlinear least s version | toolchain --------|---------- ``19961126`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MIRA.md b/docs/version-specific/supported-software/m/MIRA.md index 75f2595a5..5bbac1e8f 100644 --- a/docs/version-specific/supported-software/m/MIRA.md +++ b/docs/version-specific/supported-software/m/MIRA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MIRA MIRA is a whole genome shotgun and EST sequence assembler for Sanger, 454, Solexa (Illumina), IonTorrent data and PacBio (the latter at the moment only CCS and error-corrected CLR reads). @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``4.0.2`` | | ``intel/2017b`` ``4.9.6`` | | ``intel/2017b`` ``5.0rc2`` | | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MITObim.md b/docs/version-specific/supported-software/m/MITObim.md index 649a56410..e3c5afc32 100644 --- a/docs/version-specific/supported-software/m/MITObim.md +++ b/docs/version-specific/supported-software/m/MITObim.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MITObim The MITObim procedure (mitochondrial baiting and iterative mapping) represents a highly efficient approach to assembling novel mitochondrial genomes of non-model organisms directly from total genomic DNA derived NGS reads. @@ -9,3 +13,6 @@ version | toolchain ``1.9.1`` | ``foss/2018b`` ``1.9.1`` | ``foss/2020b`` ``1.9.1`` | ``gompi/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MITgcmutils.md b/docs/version-specific/supported-software/m/MITgcmutils.md index 01c66e80b..2df2fe3c6 100644 --- a/docs/version-specific/supported-software/m/MITgcmutils.md +++ b/docs/version-specific/supported-software/m/MITgcmutils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MITgcmutils A numerical model designed for study of the atmosphere, ocean, and climate, MITgcm’s flexible non-hydrostatic formulation enables it to efficiently simulate fluid phenomena over a wide range of scales; its adjoint capabilities enable it to be applied to sensitivity questions and to parameter and state estimation problems. By employing fluid equation isomorphisms, a single dynamical kernel can be used to simulate flow of both the atmosphere and ocean. The model is developed to perform efficiently on a wide variety of computational platforms. @@ -7,3 +11,6 @@ A numerical model designed for study of the atmosphere, ocean, and climate, MIT version | toolchain --------|---------- ``0.1.2`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MLC.md b/docs/version-specific/supported-software/m/MLC.md index b1f34202d..89661a60e 100644 --- a/docs/version-specific/supported-software/m/MLC.md +++ b/docs/version-specific/supported-software/m/MLC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MLC Intel Memory Latency Checker (Intel MLC) is a tool used to measure memory latencies and b/w, and how they change with increasing load on the system. @@ -7,3 +11,6 @@ Intel Memory Latency Checker (Intel MLC) is a tool used to measure memory latenc version | toolchain --------|---------- ``3.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MLflow.md b/docs/version-specific/supported-software/m/MLflow.md index 8d58a24a2..d7ec0df32 100644 --- a/docs/version-specific/supported-software/m/MLflow.md +++ b/docs/version-specific/supported-software/m/MLflow.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MLflow MLflow is a platform to streamline machine learning development, including tracking experiments, packaging code into reproducible runs, and sharing and deploying models. @@ -7,3 +11,6 @@ MLflow is a platform to streamline machine learning development, including track version | toolchain --------|---------- ``2.10.2`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MLxtend.md b/docs/version-specific/supported-software/m/MLxtend.md index 20b426cf6..f702ea0b0 100644 --- a/docs/version-specific/supported-software/m/MLxtend.md +++ b/docs/version-specific/supported-software/m/MLxtend.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MLxtend Mlxtend (machine learning extensions) is a Python library of useful tools for the day-to-day data science tasks. @@ -7,3 +11,6 @@ Mlxtend (machine learning extensions) is a Python library of useful tools for th version | versionsuffix | toolchain --------|---------------|---------- ``0.17.3`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MMSEQ.md b/docs/version-specific/supported-software/m/MMSEQ.md index 71fd6f31c..a83052857 100644 --- a/docs/version-specific/supported-software/m/MMSEQ.md +++ b/docs/version-specific/supported-software/m/MMSEQ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MMSEQ The MMSEQ package contains a collection of statistical tools for analysing RNA-seq expression data. @@ -7,3 +11,6 @@ The MMSEQ package contains a collection of statistical tools for analysing RNA- version | versionsuffix | toolchain --------|---------------|---------- ``1.0.8`` | ``-linux64-static`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MMseqs2.md b/docs/version-specific/supported-software/m/MMseqs2.md index 7d62e35be..9b277a0ab 100644 --- a/docs/version-specific/supported-software/m/MMseqs2.md +++ b/docs/version-specific/supported-software/m/MMseqs2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MMseqs2 MMseqs2: ultra fast and sensitive search and clustering suite @@ -19,3 +23,6 @@ version | toolchain ``14-7e284`` | ``gompi/2023a`` ``5-9375b`` | ``intel/2018a`` ``8-fac81`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MNE-Python.md b/docs/version-specific/supported-software/m/MNE-Python.md index 1a1d2c861..3367b23b0 100644 --- a/docs/version-specific/supported-software/m/MNE-Python.md +++ b/docs/version-specific/supported-software/m/MNE-Python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MNE-Python MNE-Python software is an open-source Python package for exploring, visualizing, and analyzing human neurophysiological data such as MEG, EEG, sEEG, ECoG, and more. It includes modules for data input/output, preprocessing, visualization, source estimation, time-frequency analysis, connectivity analysis, machine learning, and statistics. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.24.1`` | ``foss/2021a`` ``1.6.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MOABB.md b/docs/version-specific/supported-software/m/MOABB.md index 5ed183e38..ccadb3bce 100644 --- a/docs/version-specific/supported-software/m/MOABB.md +++ b/docs/version-specific/supported-software/m/MOABB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MOABB Build a comprehensive benchmark of popular Brain-Computer Interface (BCI) algorithms applied on an extensive list of freely available EEG datasets. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.4.6`` | ``foss/2021a`` ``1.0.0`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MOABS.md b/docs/version-specific/supported-software/m/MOABS.md index 3530d670a..3190b6d98 100644 --- a/docs/version-specific/supported-software/m/MOABS.md +++ b/docs/version-specific/supported-software/m/MOABS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MOABS MOABS: MOdel based Analysis of Bisulfite Sequencing data @@ -7,3 +11,6 @@ MOABS: MOdel based Analysis of Bisulfite Sequencing data version | toolchain --------|---------- ``1.3.9.6`` | ``gompi/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MOB-suite.md b/docs/version-specific/supported-software/m/MOB-suite.md index 74d428339..e26f6d32b 100644 --- a/docs/version-specific/supported-software/m/MOB-suite.md +++ b/docs/version-specific/supported-software/m/MOB-suite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MOB-suite Software tools for clustering, reconstruction and typing of plasmids from draft assemblies @@ -7,3 +11,6 @@ Software tools for clustering, reconstruction and typing of plasmids from draft version | versionsuffix | toolchain --------|---------------|---------- ``3.1.0`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MODFLOW.md b/docs/version-specific/supported-software/m/MODFLOW.md index d0b8affcf..e3e8a1f99 100644 --- a/docs/version-specific/supported-software/m/MODFLOW.md +++ b/docs/version-specific/supported-software/m/MODFLOW.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MODFLOW MODFLOW is the USGS's modular hydrologic model. MODFLOW is considered an international standard for simulating and predicting groundwater conditions and groundwater/surface-water interactions. @@ -7,3 +11,6 @@ MODFLOW is the USGS's modular hydrologic model. MODFLOW is considered an intern version | toolchain --------|---------- ``6.4.4`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MOFA2.md b/docs/version-specific/supported-software/m/MOFA2.md index 7e3e7a8dd..2961c61b0 100644 --- a/docs/version-specific/supported-software/m/MOFA2.md +++ b/docs/version-specific/supported-software/m/MOFA2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MOFA2 MOFA is a factor analysis model that provides a general framework for the integration of multi-omic data sets in an unsupervised fashion. Intuitively, MOFA can be viewed as a versatile and statistically rigorous generalization of principal component analysis to multi-omics data. Given several data matrices with measurements of multiple -omics data types on the same or on overlapping sets of samples, MOFA infers an interpretable low-dimensional representation in terms of a few latent factors. These learnt factors represent the driving sources of variation across data modalities, thus facilitating the identification of cellular states or disease subgroups. @@ -7,3 +11,6 @@ MOFA is a factor analysis model that provides a general framework for the integ version | versionsuffix | toolchain --------|---------------|---------- ``1.14.0`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MONA.md b/docs/version-specific/supported-software/m/MONA.md index e49e6d86b..de212b986 100644 --- a/docs/version-specific/supported-software/m/MONA.md +++ b/docs/version-specific/supported-software/m/MONA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MONA MONA is a tool that translates formulas to finite-state automata. The formulas may express search patterns, temporal properties of reactive systems, parse tree constraints, etc. MONA analyses the automaton resulting from the compilation and prints out "valid" or a counter-example. @@ -7,3 +11,6 @@ MONA is a tool that translates formulas to finite-state automata. The formulas m version | toolchain --------|---------- ``1.4-18`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MONAI-Label.md b/docs/version-specific/supported-software/m/MONAI-Label.md index 052fb6c6f..d581bf472 100644 --- a/docs/version-specific/supported-software/m/MONAI-Label.md +++ b/docs/version-specific/supported-software/m/MONAI-Label.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MONAI-Label MONAI Label is an intelligent open source image labeling and learning tool that enables users to create annotated datasets and build AI annotation models for clinical evaluation. MONAI Label enables application developers to build labeling apps in a serverless way, where custom labeling apps are exposed as a service through the MONAI Label Server. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.5.2`` | ``-PyTorch-1.12.0-CUDA-11.7.0`` | ``foss/2022a`` ``0.5.2`` | ``-PyTorch-1.12.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MONAI.md b/docs/version-specific/supported-software/m/MONAI.md index 075ea7ab2..cbfddd2c8 100644 --- a/docs/version-specific/supported-software/m/MONAI.md +++ b/docs/version-specific/supported-software/m/MONAI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MONAI MONAI is a PyTorch-based, open-source framework for deep learning in healthcare imaging, part of PyTorch Ecosystem. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``1.0.1`` | | ``foss/2022a`` ``1.3.0`` | ``-CUDA-12.1.1`` | ``foss/2023a`` ``1.3.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MOOSE.md b/docs/version-specific/supported-software/m/MOOSE.md index 5b2a26f08..31871fdfc 100644 --- a/docs/version-specific/supported-software/m/MOOSE.md +++ b/docs/version-specific/supported-software/m/MOOSE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MOOSE The Multiphysics Object-Oriented Simulation Environment (MOOSE) is a finite-element, multiphysics framework primarily developed by Idaho National Laboratory @@ -7,3 +11,6 @@ The Multiphysics Object-Oriented Simulation Environment (MOOSE) is a finite-elem version | versionsuffix | toolchain --------|---------------|---------- ``2021-05-18`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MPB.md b/docs/version-specific/supported-software/m/MPB.md index e759c0e2d..dab1c1cdf 100644 --- a/docs/version-specific/supported-software/m/MPB.md +++ b/docs/version-specific/supported-software/m/MPB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MPB MPB is a free and open-source software package for computing the band structures, or dispersion relations, and electromagnetic modes of periodic dielectric structures, on both serial and parallel computers. MPB is an acronym for MIT Photonic Bands. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.6.2`` | ``-Python-2.7.14`` | ``foss/2017b`` ``1.6.2`` | ``-Python-2.7.14`` | ``foss/2018a`` ``1.6.2`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MPC.md b/docs/version-specific/supported-software/m/MPC.md index ee81e45c0..7f8e99f65 100644 --- a/docs/version-specific/supported-software/m/MPC.md +++ b/docs/version-specific/supported-software/m/MPC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MPC Gnu Mpc is a C library for the arithmetic of complex numbers with arbitrarily high precision and correct rounding of the result. It extends the principles of the IEEE-754 standard for fixed precision real floating point numbers to complex numbers, providing well-defined semantics for every operation. At the same time, speed of operation at high precision is a major design goal. @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``1.3.1`` | | ``GCCcore/12.3.0`` ``1.3.1`` | | ``GCCcore/13.2.0`` ``1.3.1`` | | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MPFI.md b/docs/version-specific/supported-software/m/MPFI.md index f8d548c77..d30b468ba 100644 --- a/docs/version-specific/supported-software/m/MPFI.md +++ b/docs/version-specific/supported-software/m/MPFI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MPFI MPFI stands for Multiple Precision Floating-point Interval library. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.5.4`` | ``GCCcore/11.3.0`` ``1.5.4`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MPFR.md b/docs/version-specific/supported-software/m/MPFR.md index f5eeba24b..6baee3a39 100644 --- a/docs/version-specific/supported-software/m/MPFR.md +++ b/docs/version-specific/supported-software/m/MPFR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MPFR The MPFR library is a C library for multiple-precision floating-point computations with correct rounding. @@ -27,3 +31,6 @@ version | toolchain ``4.2.0`` | ``GCCcore/12.3.0`` ``4.2.1`` | ``GCCcore/13.2.0`` ``4.2.1`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MPICH.md b/docs/version-specific/supported-software/m/MPICH.md index dbad26515..7721f47dc 100644 --- a/docs/version-specific/supported-software/m/MPICH.md +++ b/docs/version-specific/supported-software/m/MPICH.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MPICH MPICH v3.x is an open source high-performance MPI 3.0 implementation. It does not support InfiniBand (use MVAPICH2 with InfiniBand devices). @@ -13,3 +17,6 @@ version | toolchain ``3.3.2`` | ``GCC/10.2.0`` ``3.3.2`` | ``GCC/9.3.0`` ``3.4.2`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MPICH2.md b/docs/version-specific/supported-software/m/MPICH2.md index c85e21ffe..26adcc9f5 100644 --- a/docs/version-specific/supported-software/m/MPICH2.md +++ b/docs/version-specific/supported-software/m/MPICH2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MPICH2 MPICH v3.x is an open source high-performance MPI 3.0 implementation. It does not support InfiniBand (use MVAPICH2 with InfiniBand devices). @@ -7,3 +11,6 @@ MPICH v3.x is an open source high-performance MPI 3.0 implementation. It does no version | toolchain --------|---------- ``1.1`` | ``GCC/4.8.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MPJ-Express.md b/docs/version-specific/supported-software/m/MPJ-Express.md index 85f8d6ec0..5f9b7b158 100644 --- a/docs/version-specific/supported-software/m/MPJ-Express.md +++ b/docs/version-specific/supported-software/m/MPJ-Express.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MPJ-Express MPJ Express is an open source Java message passing library that allows application developers to write and execute parallel applications for multicore processors and compute clusters/clouds. @@ -7,3 +11,6 @@ MPJ Express is an open source Java message passing library that allows applicati version | versionsuffix | toolchain --------|---------------|---------- ``0.44`` | ``-Java-1.8.0_92`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MRCPP.md b/docs/version-specific/supported-software/m/MRCPP.md index 24aee2b29..9fcc7ee2d 100644 --- a/docs/version-specific/supported-software/m/MRCPP.md +++ b/docs/version-specific/supported-software/m/MRCPP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MRCPP MultiResolution Computation Program Package @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.3.6`` | ``foss/2020a`` ``1.4.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MRChem.md b/docs/version-specific/supported-software/m/MRChem.md index 4cc8aa668..4f193b642 100644 --- a/docs/version-specific/supported-software/m/MRChem.md +++ b/docs/version-specific/supported-software/m/MRChem.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MRChem MRChem is a numerical real-space code for molecular electronic structure calculations within the self-consistent field (SCF) approximations of quantum chemistry: Hartree-Fock and Density Functional Theory. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.0.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``1.1.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MRIcron.md b/docs/version-specific/supported-software/m/MRIcron.md index a74c6b877..81451103f 100644 --- a/docs/version-specific/supported-software/m/MRIcron.md +++ b/docs/version-specific/supported-software/m/MRIcron.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MRIcron MRIcron allows viewing of medical images. It includes tools to complement SPM and FSL. Native format is NIFTI but includes a conversion program (see dcm2nii) for converting DICOM images. Features layers, ROIs, and volume rendering. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.20180614`` | ``system`` ``20150601`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MRPRESSO.md b/docs/version-specific/supported-software/m/MRPRESSO.md index c8c7ba2ac..d9b0776f1 100644 --- a/docs/version-specific/supported-software/m/MRPRESSO.md +++ b/docs/version-specific/supported-software/m/MRPRESSO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MRPRESSO Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.. @@ -7,3 +11,6 @@ Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRE version | toolchain --------|---------- ``1.0-20230502`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MRtrix.md b/docs/version-specific/supported-software/m/MRtrix.md index d00698708..13ca02611 100644 --- a/docs/version-specific/supported-software/m/MRtrix.md +++ b/docs/version-specific/supported-software/m/MRtrix.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MRtrix MRtrix provides a set of tools to perform diffusion-weighted MR white-matter tractography in a manner robust to crossing fibres, using constrained spherical deconvolution (CSD) and probabilistic streamlines. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``3.0.4`` | | ``foss/2022b`` ``3.0_RC2`` | ``-Python-2.7.13`` | ``foss/2017a`` ``3.0_RC3`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MSFragger.md b/docs/version-specific/supported-software/m/MSFragger.md index d0cbb5eea..9aa220777 100644 --- a/docs/version-specific/supported-software/m/MSFragger.md +++ b/docs/version-specific/supported-software/m/MSFragger.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MSFragger MSFragger is an ultrafast database search tool for peptide identification in mass spectrometry-based proteomics. It has demonstrated excellent performance across a wide range of datasets and applications. MSFragger is suitable for standard shotgun proteomics analyses as well as large datasets (including timsTOF PASEF data), enzyme unconstrained searches (e.g., peptidome), open database searches (e.g., precursor mass tolerance set to hundreds of Daltons) for identification of modified peptides, and glycopeptide identification (N-linked and O-linked). @@ -7,3 +11,6 @@ MSFragger is an ultrafast database search tool for peptide identification in ma version | versionsuffix | toolchain --------|---------------|---------- ``4.0`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MSM.md b/docs/version-specific/supported-software/m/MSM.md index bc4c99439..575cace17 100644 --- a/docs/version-specific/supported-software/m/MSM.md +++ b/docs/version-specific/supported-software/m/MSM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MSM Multimodal Surface Matching with Higher order Clique Reduction @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0`` | ``foss/2017b`` ``1.0`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MSPC.md b/docs/version-specific/supported-software/m/MSPC.md index 23ef1cf65..317bcf38c 100644 --- a/docs/version-specific/supported-software/m/MSPC.md +++ b/docs/version-specific/supported-software/m/MSPC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MSPC Using combined evidence from replicates to evaluate ChIP-seq peaks @@ -7,3 +11,6 @@ Using combined evidence from replicates to evaluate ChIP-seq peaks version | toolchain --------|---------- ``3.3.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MTL4.md b/docs/version-specific/supported-software/m/MTL4.md index 74b6e2bc1..3a4865042 100644 --- a/docs/version-specific/supported-software/m/MTL4.md +++ b/docs/version-specific/supported-software/m/MTL4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MTL4 The Matrix Template Library 4 incorporates the most modern programming techniques to provide an easy and intuitive interface to users while enabling optimal performance. The natural mathematical notation in MTL4 empowers all engineers and scientists to implement their algorithms and models in minimal time. All technical aspects are encapsulated in the library. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``4.0.8878`` | ``system`` ``4.0.9555`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MUMPS.md b/docs/version-specific/supported-software/m/MUMPS.md index dfdc4881e..e495b557b 100644 --- a/docs/version-specific/supported-software/m/MUMPS.md +++ b/docs/version-specific/supported-software/m/MUMPS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MUMPS A parallel sparse direct solver @@ -27,3 +31,6 @@ version | versionsuffix | toolchain ``5.6.1`` | ``-metis`` | ``foss/2022b`` ``5.6.1`` | ``-metis`` | ``foss/2023a`` ``5.6.1`` | ``-metis-seq`` | ``gomkl/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MUMmer.md b/docs/version-specific/supported-software/m/MUMmer.md index 47480c295..74a301ac2 100644 --- a/docs/version-specific/supported-software/m/MUMmer.md +++ b/docs/version-specific/supported-software/m/MUMmer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MUMmer MUMmer is a system for rapidly aligning entire genomes, whether in complete or draft form. AMOS makes use of it. @@ -17,3 +21,6 @@ version | toolchain ``4.0.0rc1`` | ``GCCcore/11.3.0`` ``4.0.0rc1`` | ``GCCcore/12.2.0`` ``4.0.0rc1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MUSCLE.md b/docs/version-specific/supported-software/m/MUSCLE.md index 614cbadaf..f93bf8435 100644 --- a/docs/version-specific/supported-software/m/MUSCLE.md +++ b/docs/version-specific/supported-software/m/MUSCLE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MUSCLE MUSCLE is one of the best-performing multiple alignment programs according to published benchmark tests, with accuracy and speed that are consistently better than CLUSTALW. MUSCLE can align hundreds of sequences in seconds. Most users learn everything they need to know about MUSCLE in a few minutes-only a handful of command-line options are needed to perform common alignment tasks. @@ -27,3 +31,6 @@ version | versionsuffix | toolchain ``5.1.0`` | | ``GCCcore/10.3.0`` ``5.1.0`` | | ``GCCcore/11.3.0`` ``5.1.0`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MUSCLE3.md b/docs/version-specific/supported-software/m/MUSCLE3.md index 42ff382a0..bd40305f5 100644 --- a/docs/version-specific/supported-software/m/MUSCLE3.md +++ b/docs/version-specific/supported-software/m/MUSCLE3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MUSCLE3 MUSCLE3 allows connecting multiple simulation models together into a multiscale simulation. Simulation models can be as simple as a single Python file, or as complex as a combination of multiple separate simulation codes written in C++ or Fortran, and running on an HPC machine. @@ -7,3 +11,6 @@ MUSCLE3 allows connecting multiple simulation models together into a multiscale version | toolchain --------|---------- ``0.7.0`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MUST.md b/docs/version-specific/supported-software/m/MUST.md index cbe4bebfb..b3f4dbd13 100644 --- a/docs/version-specific/supported-software/m/MUST.md +++ b/docs/version-specific/supported-software/m/MUST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MUST MUST detects usage errors of the Message Passing Interface (MPI) and reports them to the user. As MPI calls are complex and usage errors common, this functionality is extremely helpful for application developers that want to develop correct MPI applications. This includes errors that already manifest – segmentation faults or incorrect results – as well as many errors that are not visible to the application developer or do not manifest on a certain system or MPI implementation. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.6`` | ``-Python-3.7.4`` | ``foss/2019b`` ``1.7.1`` | | ``foss/2020b`` ``1.7.2`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MVAPICH2.md b/docs/version-specific/supported-software/m/MVAPICH2.md index dce14e1d2..3be8e7443 100644 --- a/docs/version-specific/supported-software/m/MVAPICH2.md +++ b/docs/version-specific/supported-software/m/MVAPICH2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MVAPICH2 This is an MPI 3.0 implementation. It is based on MPICH2 and MVICH. @@ -9,3 +13,6 @@ version | toolchain ``2.0.1`` | ``GCC/4.8.4`` ``2.1`` | ``GCC/4.9.3-2.25`` ``2.2b`` | ``GCC/4.9.3-2.25`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MView.md b/docs/version-specific/supported-software/m/MView.md index 7fb2b4bb6..782464cd2 100644 --- a/docs/version-specific/supported-software/m/MView.md +++ b/docs/version-specific/supported-software/m/MView.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MView MView reformats the results of a sequence database search or a multiple alignment, optionally adding HTML markup. @@ -7,3 +11,6 @@ MView reformats the results of a sequence database search or a multiple alignm version | toolchain --------|---------- ``1.67`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MXNet.md b/docs/version-specific/supported-software/m/MXNet.md index 423a35447..fd76b9e45 100644 --- a/docs/version-specific/supported-software/m/MXNet.md +++ b/docs/version-specific/supported-software/m/MXNet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MXNet Flexible and Efficient Library for Deep Learning @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.9.3`` | ``-Python-2.7.12-R-3.3.3`` | ``foss/2016b`` ``1.9.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MaSuRCA.md b/docs/version-specific/supported-software/m/MaSuRCA.md index 42f58d03f..fb18ea742 100644 --- a/docs/version-specific/supported-software/m/MaSuRCA.md +++ b/docs/version-specific/supported-software/m/MaSuRCA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MaSuRCA MaSuRCA is whole genome assembly software. It combines the efficiency of the de Bruijn graph and Overlap-Layout-Consensus (OLC) approaches. MaSuRCA can assemble data sets containing only short reads from Illumina sequencing or a mixture of short reads and long reads (Sanger, 454, Pacbio and Nanopore). @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``4.0.1`` | ``-Perl-5.30.2`` | ``foss/2020a`` ``4.0.9`` | ``-Perl-5.32.1`` | ``foss/2021a`` ``4.1.0`` | | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Magics.md b/docs/version-specific/supported-software/m/Magics.md index 00a2f1365..7a08ea051 100644 --- a/docs/version-specific/supported-software/m/Magics.md +++ b/docs/version-specific/supported-software/m/Magics.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Magics Magics is ECMWF's meteorological plotting software and can be either accessed directly through its Python or Fortran interfaces or by using Metview. @@ -7,3 +11,6 @@ Magics is ECMWF's meteorological plotting software and can be either accessed d version | toolchain --------|---------- ``4.13.0`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MagresPython.md b/docs/version-specific/supported-software/m/MagresPython.md index f75f50e2a..3a3bc3ac9 100644 --- a/docs/version-specific/supported-software/m/MagresPython.md +++ b/docs/version-specific/supported-software/m/MagresPython.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MagresPython MagresPython is a Python library for parsing the CCP-NC ab-initio magnetic resonance file format. This is used in the latest version of the CASTEP and Quantum ESPRESSO (PWSCF) codes. @@ -7,3 +11,6 @@ MagresPython is a Python library for parsing the CCP-NC ab-initio magnetic reson version | versionsuffix | toolchain --------|---------------|---------- ``20160329`` | ``-Python-2.7.15`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Mako.md b/docs/version-specific/supported-software/m/Mako.md index c1f798f15..02db5bedf 100644 --- a/docs/version-specific/supported-software/m/Mako.md +++ b/docs/version-specific/supported-software/m/Mako.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Mako A super-fast templating language that borrows the best ideas from the existing templating languages @@ -35,3 +39,6 @@ version | versionsuffix | toolchain ``1.2.4`` | | ``GCCcore/12.3.0`` ``1.2.4`` | | ``GCCcore/13.2.0`` ``1.3.5`` | | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Mamba.md b/docs/version-specific/supported-software/m/Mamba.md index 3c063f0e3..a3afe24e5 100644 --- a/docs/version-specific/supported-software/m/Mamba.md +++ b/docs/version-specific/supported-software/m/Mamba.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Mamba Mamba is a fast, robust, and cross-platform package manager. It runs on Windows, OS X and Linux (ARM64 and PPC64LE included) and is fully compatible with conda packages and supports most of conda's commands. @@ -9,3 +13,6 @@ version | toolchain ``23.1.0-4`` | ``system`` ``23.11.0-0`` | ``system`` ``4.14.0-0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MapSplice.md b/docs/version-specific/supported-software/m/MapSplice.md index 89025f569..0cd2ed74e 100644 --- a/docs/version-specific/supported-software/m/MapSplice.md +++ b/docs/version-specific/supported-software/m/MapSplice.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MapSplice MapSplice is a software for mapping RNA-seq data to reference genome for splice junction discovery that depends only on reference genome, and not on any further annotations. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.2.1`` | ``-Python-2.7.12`` | ``foss/2016b`` ``2.2.1`` | ``-Python-2.7.15`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Maple.md b/docs/version-specific/supported-software/m/Maple.md index c355159ee..9a273dc6c 100644 --- a/docs/version-specific/supported-software/m/Maple.md +++ b/docs/version-specific/supported-software/m/Maple.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Maple Maple combines the world's most powerful mathematical computation engine with an intuitive, 'clickable' user interface. @@ -9,3 +13,6 @@ version | toolchain ``15`` | ``system`` ``2017.2`` | ``system`` ``2022.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Maq.md b/docs/version-specific/supported-software/m/Maq.md index 47c836e1e..ffd9076f9 100644 --- a/docs/version-specific/supported-software/m/Maq.md +++ b/docs/version-specific/supported-software/m/Maq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Maq Maq is a software that builds mapping assemblies from short reads generated by the next-generation sequencing machines. @@ -7,3 +11,6 @@ Maq is a software that builds mapping assemblies from short reads generated by t version | toolchain --------|---------- ``0.7.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MariaDB-connector-c.md b/docs/version-specific/supported-software/m/MariaDB-connector-c.md index b9808019b..5ef9df19c 100644 --- a/docs/version-specific/supported-software/m/MariaDB-connector-c.md +++ b/docs/version-specific/supported-software/m/MariaDB-connector-c.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MariaDB-connector-c MariaDB Connector/C is used to connect applications developed in C/C++ to MariaDB and MySQL databases. @@ -16,3 +20,6 @@ version | toolchain ``3.1.11`` | ``GCCcore/10.2.0`` ``3.1.7`` | ``GCCcore/9.3.0`` ``3.2.2`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MariaDB.md b/docs/version-specific/supported-software/m/MariaDB.md index 2e0b1a023..03154d8a0 100644 --- a/docs/version-specific/supported-software/m/MariaDB.md +++ b/docs/version-specific/supported-software/m/MariaDB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MariaDB MariaDB An enhanced, drop-in replacement for MySQL. @@ -23,3 +27,6 @@ version | toolchain ``10.6.4`` | ``GCC/10.3.0`` ``10.6.4`` | ``GCC/11.2.0`` ``10.9.3`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Markdown.md b/docs/version-specific/supported-software/m/Markdown.md index 292613739..8bd99b64a 100644 --- a/docs/version-specific/supported-software/m/Markdown.md +++ b/docs/version-specific/supported-software/m/Markdown.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Markdown This is a Python implementation of John Gruber's Markdown. It is almost completely compliant with the reference implementation, though there are a few known issues. Additional features are supported by the Available Extensions. @@ -9,3 +13,6 @@ version | toolchain ``3.6`` | ``GCCcore/12.2.0`` ``3.6`` | ``GCCcore/12.3.0`` ``3.6`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Mash.md b/docs/version-specific/supported-software/m/Mash.md index 7d3fd470f..2bab66f10 100644 --- a/docs/version-specific/supported-software/m/Mash.md +++ b/docs/version-specific/supported-software/m/Mash.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Mash Fast genome and metagenome distance estimation using MinHash @@ -15,3 +19,6 @@ version | toolchain ``2.3`` | ``GCC/12.2.0`` ``2.3`` | ``GCC/12.3.0`` ``2.3`` | ``intel-compilers/2021.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Mashtree.md b/docs/version-specific/supported-software/m/Mashtree.md index 2ee9bc325..9ebef061c 100644 --- a/docs/version-specific/supported-software/m/Mashtree.md +++ b/docs/version-specific/supported-software/m/Mashtree.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Mashtree Create a tree using Mash distances. @@ -7,3 +11,6 @@ Create a tree using Mash distances. version | toolchain --------|---------- ``1.4.6`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MathGL.md b/docs/version-specific/supported-software/m/MathGL.md index cd9512c89..5e1b01045 100644 --- a/docs/version-specific/supported-software/m/MathGL.md +++ b/docs/version-specific/supported-software/m/MathGL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MathGL MathGL is ... a library for making high-quality scientific graphics under Linux and Windows; a library for the fast data plotting and data processing of large data arrays; a library for working in window and console modes and for easy embedding into other programs; a library with large and growing set of graphics. @@ -7,3 +11,6 @@ MathGL is ... a library for making high-quality scientific graphics under Linux version | toolchain --------|---------- ``2.4.1`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Mathematica.md b/docs/version-specific/supported-software/m/Mathematica.md index ba6e790c4..c8ca48b69 100644 --- a/docs/version-specific/supported-software/m/Mathematica.md +++ b/docs/version-specific/supported-software/m/Mathematica.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Mathematica Mathematica is a computational software program used in many scientific, engineering, mathematical and computing fields. @@ -17,3 +21,6 @@ version | toolchain ``13.0.0`` | ``system`` ``13.1.0`` | ``system`` ``9.0.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Maude.md b/docs/version-specific/supported-software/m/Maude.md index 3f35186be..64d55a74a 100644 --- a/docs/version-specific/supported-software/m/Maude.md +++ b/docs/version-specific/supported-software/m/Maude.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Maude Maude is a high-performance reflective language and system supporting both equational and rewriting logic specification and programming for a wide range of applications. Maude has been influenced in important ways by the OBJ3 language, which can be regarded as an equational logic sublanguage. Besides supporting equational specification and programming, Maude also supports rewriting logic computation. @@ -7,3 +11,6 @@ Maude is a high-performance reflective language and system supporting both equat version | toolchain --------|---------- ``3.1`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Maven.md b/docs/version-specific/supported-software/m/Maven.md index 2c9a38eed..22e13c4f6 100644 --- a/docs/version-specific/supported-software/m/Maven.md +++ b/docs/version-specific/supported-software/m/Maven.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Maven Binary maven install, Apache Maven is a software project management and comprehension tool. Based on the concept of a project object model (POM), Maven can manage a project's build, reporting and documentation from a central piece of information. @@ -13,3 +17,6 @@ version | toolchain ``3.5.2`` | ``system`` ``3.6.0`` | ``system`` ``3.6.3`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MaxBin.md b/docs/version-specific/supported-software/m/MaxBin.md index e7617bf9d..f2bcee87e 100644 --- a/docs/version-specific/supported-software/m/MaxBin.md +++ b/docs/version-specific/supported-software/m/MaxBin.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MaxBin MaxBin is software for binning assembled metagenomic sequences based on an Expectation-Maximization algorithm. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``2.2.7`` | | ``gompi/2020b`` ``2.2.7`` | | ``gompi/2021a`` ``2.2.7`` | | ``gompi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MaxQuant.md b/docs/version-specific/supported-software/m/MaxQuant.md index 9432ddd45..f293146e2 100644 --- a/docs/version-specific/supported-software/m/MaxQuant.md +++ b/docs/version-specific/supported-software/m/MaxQuant.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MaxQuant MaxQuant is a quantitative proteomics software package designed for analyzing large mass-spectrometric data sets. It is specifically aimed at high-resolution MS data. Several labeling techniques as well as label-free quantification are supported. @@ -10,3 +14,6 @@ version | toolchain ``2.0.3.0`` | ``GCCcore/11.2.0`` ``2.2.0.0`` | ``GCCcore/11.2.0`` ``2.4.2.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MbedTLS.md b/docs/version-specific/supported-software/m/MbedTLS.md index 002e345d4..29f48b235 100644 --- a/docs/version-specific/supported-software/m/MbedTLS.md +++ b/docs/version-specific/supported-software/m/MbedTLS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MbedTLS An open source, portable, easy to use, readable and flexible SSL library. @@ -7,3 +11,6 @@ An open source, portable, easy to use, readable and flexible SSL library. version | toolchain --------|---------- ``2.26.0`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MedPy.md b/docs/version-specific/supported-software/m/MedPy.md index 3d05df255..2c023da31 100644 --- a/docs/version-specific/supported-software/m/MedPy.md +++ b/docs/version-specific/supported-software/m/MedPy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MedPy MedPy is a library and script collection for medical image processing in Python, providing basic functionalities for reading, writing and manipulating large images of arbitrary dimensionality. Its main contributions are n-dimensional versions of popular image filters, a collection of image feature extractors, ready to be used with scikit-learn, and an exhaustive n-dimensional graph-cut package. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.4.0`` | ``-Python-3.7.4`` | ``foss/2019b`` ``0.4.0`` | | ``foss/2020b`` ``0.4.0`` | | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Meep.md b/docs/version-specific/supported-software/m/Meep.md index 95792514d..1e3aa01cc 100644 --- a/docs/version-specific/supported-software/m/Meep.md +++ b/docs/version-specific/supported-software/m/Meep.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Meep Meep (or MEEP) is a free finite-difference time-domain (FDTD) simulation software package developed at MIT to model electromagnetic systems. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``1.6.0`` | ``-Python-2.7.14`` | ``foss/2017b`` ``1.6.0`` | ``-Python-2.7.14`` | ``foss/2018a`` ``1.6.0`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Megalodon.md b/docs/version-specific/supported-software/m/Megalodon.md index b2c02d110..6d18d58bd 100644 --- a/docs/version-specific/supported-software/m/Megalodon.md +++ b/docs/version-specific/supported-software/m/Megalodon.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Megalodon Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network output to a reference genome/transriptome. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.3.5`` | | ``fosscuda/2020b`` ``2.5.0`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``2.5.0`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Meld.md b/docs/version-specific/supported-software/m/Meld.md index e49545fc8..d640276c5 100644 --- a/docs/version-specific/supported-software/m/Meld.md +++ b/docs/version-specific/supported-software/m/Meld.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Meld Meld is a visual diff and merge tool targeted at developers. Meld helps you compare files, directories, and version controlled projects. It provides two- and three-way comparison of both files and directories, and has support for many popular version control systems. @@ -7,3 +11,6 @@ Meld is a visual diff and merge tool targeted at developers. Meld helps you co version | versionsuffix | toolchain --------|---------------|---------- ``3.20.1`` | ``-Python-3.7.2`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Mercurial.md b/docs/version-specific/supported-software/m/Mercurial.md index ff2373e08..0b74788c3 100644 --- a/docs/version-specific/supported-software/m/Mercurial.md +++ b/docs/version-specific/supported-software/m/Mercurial.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Mercurial Mercurial is a free, distributed source control management tool. It efficiently handles projects of any size and offers an easy and intuitive interface. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``5.8`` | | ``GCCcore/10.3.0`` ``6.2`` | | ``GCCcore/11.3.0`` ``6.4.5`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Mesa-demos.md b/docs/version-specific/supported-software/m/Mesa-demos.md index de7918b31..6d9c3787d 100644 --- a/docs/version-specific/supported-software/m/Mesa-demos.md +++ b/docs/version-specific/supported-software/m/Mesa-demos.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Mesa-demos Mesa utility and demo programs, including glxinfo and eglinfo. @@ -7,3 +11,6 @@ Mesa utility and demo programs, including glxinfo and eglinfo. version | toolchain --------|---------- ``8.4.0`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Mesa.md b/docs/version-specific/supported-software/m/Mesa.md index 3e5e5ca6f..de4b063db 100644 --- a/docs/version-specific/supported-software/m/Mesa.md +++ b/docs/version-specific/supported-software/m/Mesa.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Mesa Mesa is an open-source implementation of the OpenGL specification - a system for rendering interactive 3D graphics. @@ -37,3 +41,6 @@ version | toolchain ``22.2.4`` | ``GCCcore/12.2.0`` ``23.1.4`` | ``GCCcore/12.3.0`` ``23.1.9`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Meson.md b/docs/version-specific/supported-software/m/Meson.md index 9f80de29e..941f58263 100644 --- a/docs/version-specific/supported-software/m/Meson.md +++ b/docs/version-specific/supported-software/m/Meson.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Meson Meson is a cross-platform build system designed to be both as fast and as user friendly as possible. @@ -27,3 +31,6 @@ version | versionsuffix | toolchain ``1.2.3`` | | ``GCCcore/13.2.0`` ``1.3.1`` | | ``GCCcore/12.3.0`` ``1.4.0`` | | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Mesquite.md b/docs/version-specific/supported-software/m/Mesquite.md index 49bc6ee91..c4557b875 100644 --- a/docs/version-specific/supported-software/m/Mesquite.md +++ b/docs/version-specific/supported-software/m/Mesquite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Mesquite Mesh-Quality Improvement Library @@ -13,3 +17,6 @@ version | toolchain ``2.3.0`` | ``gimkl/2.11.5`` ``2.3.0`` | ``intel/2016a`` ``2.3.0`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MetaBAT.md b/docs/version-specific/supported-software/m/MetaBAT.md index 996c6fe8f..4ebb59d8d 100644 --- a/docs/version-specific/supported-software/m/MetaBAT.md +++ b/docs/version-specific/supported-software/m/MetaBAT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MetaBAT An efficient tool for accurately reconstructing single genomes from complex microbial communities @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``2.15`` | ``-Python-2.7.18`` | ``gompi/2020b`` ``2.15`` | | ``gompi/2021a`` ``2.15`` | | ``gompi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MetaDecoder.md b/docs/version-specific/supported-software/m/MetaDecoder.md index 29d5a48f9..714384a25 100644 --- a/docs/version-specific/supported-software/m/MetaDecoder.md +++ b/docs/version-specific/supported-software/m/MetaDecoder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MetaDecoder An algorithm for clustering metagenomic sequences @@ -7,3 +11,6 @@ An algorithm for clustering metagenomic sequences version | toolchain --------|---------- ``1.0.19`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MetaEuk.md b/docs/version-specific/supported-software/m/MetaEuk.md index bf01f0ffd..7b6d4ea50 100644 --- a/docs/version-specific/supported-software/m/MetaEuk.md +++ b/docs/version-specific/supported-software/m/MetaEuk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MetaEuk MetaEuk is a modular toolkit designed for large-scale gene discovery and annotation in eukaryotic metagenomic contigs. @@ -11,3 +15,6 @@ version | toolchain ``6`` | ``GCC/11.2.0`` ``6`` | ``GCC/11.3.0`` ``6`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MetaGeneAnnotator.md b/docs/version-specific/supported-software/m/MetaGeneAnnotator.md index a151e5797..4095a7bbb 100644 --- a/docs/version-specific/supported-software/m/MetaGeneAnnotator.md +++ b/docs/version-specific/supported-software/m/MetaGeneAnnotator.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MetaGeneAnnotator MetaGeneAnnotator is a gene-finding program for prokaryote and phage. @@ -7,3 +11,6 @@ MetaGeneAnnotator is a gene-finding program for prokaryote and phage. version | versionsuffix | toolchain --------|---------------|---------- ``20080819`` | ``-x86-64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MetaMorpheus.md b/docs/version-specific/supported-software/m/MetaMorpheus.md index d7e44c595..b0fcc6b67 100644 --- a/docs/version-specific/supported-software/m/MetaMorpheus.md +++ b/docs/version-specific/supported-software/m/MetaMorpheus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MetaMorpheus MetaMorpheus is a bottom-up proteomics database search software with integrated post-translational modification (PTM) discovery capability. This program combines features of Morpheus and G-PTM-D in a single tool. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.0.320`` | ``GCCcore/10.3.0`` ``1.0.5`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MetaPhlAn.md b/docs/version-specific/supported-software/m/MetaPhlAn.md index 87f5fcf86..d8a701d27 100644 --- a/docs/version-specific/supported-software/m/MetaPhlAn.md +++ b/docs/version-specific/supported-software/m/MetaPhlAn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MetaPhlAn MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.0.9`` | ``-Python-3.8.2`` | ``foss/2020a`` ``4.0.6`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MetaPhlAn2.md b/docs/version-specific/supported-software/m/MetaPhlAn2.md index 9b4365dfa..0f11f153f 100644 --- a/docs/version-specific/supported-software/m/MetaPhlAn2.md +++ b/docs/version-specific/supported-software/m/MetaPhlAn2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MetaPhlAn2 MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea, Eukaryotes and Viruses) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.7.8`` | ``-Python-2.7.12`` | ``foss/2016b`` ``2.7.8`` | ``-Python-3.6.6`` | ``foss/2018b`` ``2.7.8`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MetaboAnalystR.md b/docs/version-specific/supported-software/m/MetaboAnalystR.md index 295f017b1..f6d12f2c4 100644 --- a/docs/version-specific/supported-software/m/MetaboAnalystR.md +++ b/docs/version-specific/supported-software/m/MetaboAnalystR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MetaboAnalystR MetaboAnalystR contains the R functions and libraries underlying the popular MetaboAnalyst web server, including > 500 functions for metabolomic data analysis, visualization, and functional interpretation. @@ -7,3 +11,6 @@ MetaboAnalystR contains the R functions and libraries underlying the popular Met version | versionsuffix | toolchain --------|---------------|---------- ``2.0.1-20190827`` | ``-R-3.6.0`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Metagenome-Atlas.md b/docs/version-specific/supported-software/m/Metagenome-Atlas.md index ee33efeef..edc7a8b86 100644 --- a/docs/version-specific/supported-software/m/Metagenome-Atlas.md +++ b/docs/version-specific/supported-software/m/Metagenome-Atlas.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Metagenome-Atlas Metagenome-atlas is a easy-to-use metagenomic pipeline based on snakemake. It handles all steps from QC, Assembly, Binning, to Annotation. @@ -7,3 +11,6 @@ Metagenome-atlas is a easy-to-use metagenomic pipeline based on snakemake. It h version | versionsuffix | toolchain --------|---------------|---------- ``2.4.3`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Metal.md b/docs/version-specific/supported-software/m/Metal.md index f73d9604b..2fee0dff7 100644 --- a/docs/version-specific/supported-software/m/Metal.md +++ b/docs/version-specific/supported-software/m/Metal.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Metal Metal - Meta Analysis Helper. The METAL software is designed to facilitate meta-analysis of large datasets (such as several whole genome scans) in a convenient, rapid and memory efficient manner. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2011-03-25`` | ``foss/2016a`` ``2020-05-05`` | ``GCC/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MetalWalls.md b/docs/version-specific/supported-software/m/MetalWalls.md index 60f7bee14..3f49d00af 100644 --- a/docs/version-specific/supported-software/m/MetalWalls.md +++ b/docs/version-specific/supported-software/m/MetalWalls.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MetalWalls MetalWalls (MW) is a molecular dynamics code dedicated to the modelling of electrochemical systems. Its main originality is the inclusion of a series of methods allowing to apply a constant potential within the electrode materials. @@ -7,3 +11,6 @@ MetalWalls (MW) is a molecular dynamics code dedicated to the modelling of elect version | toolchain --------|---------- ``21.06.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Metaxa2.md b/docs/version-specific/supported-software/m/Metaxa2.md index 4918c1c9a..0bc0a5d28 100644 --- a/docs/version-specific/supported-software/m/Metaxa2.md +++ b/docs/version-specific/supported-software/m/Metaxa2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Metaxa2 Metaxa2 -- Identifies Small Subunit (SSU) rRNAs and classifies them taxonomically @@ -7,3 +11,6 @@ Metaxa2 -- Identifies Small Subunit (SSU) rRNAs and classifies them taxonomicall version | toolchain --------|---------- ``2.2`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MethylDackel.md b/docs/version-specific/supported-software/m/MethylDackel.md index a78988546..a7b1a9d71 100644 --- a/docs/version-specific/supported-software/m/MethylDackel.md +++ b/docs/version-specific/supported-software/m/MethylDackel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MethylDackel A (mostly) universal methylation extractor for BS-seq experiments. @@ -9,3 +13,6 @@ version | toolchain ``0.4.0`` | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` ``0.5.0`` | ``iccifort/2019.5.281`` ``0.6.1`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MiGEC.md b/docs/version-specific/supported-software/m/MiGEC.md index 60881a56e..8f729a5a7 100644 --- a/docs/version-specific/supported-software/m/MiGEC.md +++ b/docs/version-specific/supported-software/m/MiGEC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MiGEC MIGEC is a software pipeline that facilitates processing and analysis of immune repertoire sequencing data generated using molecular barcoding technique @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.2.8`` | ``-Java-1.8.0_162`` | ``system`` ``1.2.9`` | ``-Java-1.8`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MiXCR.md b/docs/version-specific/supported-software/m/MiXCR.md index 0d994817b..52bb42ee1 100644 --- a/docs/version-specific/supported-software/m/MiXCR.md +++ b/docs/version-specific/supported-software/m/MiXCR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MiXCR MiXCR processes big immunome data from raw sequences to quantitated clonotypes @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``3.0.13`` | ``-Java-11`` | ``system`` ``3.0.3`` | ``-Java-1.8`` | ``system`` ``4.6.0`` | ``-Java-17`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MicrobeAnnotator.md b/docs/version-specific/supported-software/m/MicrobeAnnotator.md index 6fb5aa6b6..f4c128578 100644 --- a/docs/version-specific/supported-software/m/MicrobeAnnotator.md +++ b/docs/version-specific/supported-software/m/MicrobeAnnotator.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MicrobeAnnotator Easy-to-use pipeline for the comprehensive metabolic annotation of microbial genomes. @@ -7,3 +11,6 @@ Easy-to-use pipeline for the comprehensive metabolic annotation of microbial gen version | toolchain --------|---------- ``2.0.5`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Mikado.md b/docs/version-specific/supported-software/m/Mikado.md index b72f1c57c..8b8dd360f 100644 --- a/docs/version-specific/supported-software/m/Mikado.md +++ b/docs/version-specific/supported-software/m/Mikado.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Mikado Mikado is a lightweight Python3 pipeline to identify the most useful or “best” set of transcripts from multiple transcript assemblies. Our approach leverages transcript assemblies generated by multiple methods to define expressed loci, assign a representative transcript and return a set of gene models that selects against transcripts that are chimeric, fragmented or with short or disrupted CDS. @@ -7,3 +11,6 @@ Mikado is a lightweight Python3 pipeline to identify the most useful or “best version | toolchain --------|---------- ``2.3.4`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Miller.md b/docs/version-specific/supported-software/m/Miller.md index 22a8b29ab..dfcb65a4c 100644 --- a/docs/version-specific/supported-software/m/Miller.md +++ b/docs/version-specific/supported-software/m/Miller.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Miller Miller is like awk, sed, cut, join, and sort for name-indexed data such as CSV, TSV, and tabular JSON @@ -7,3 +11,6 @@ Miller is like awk, sed, cut, join, and sort for name-indexed data such as CSV, version | toolchain --------|---------- ``6.4.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MinCED.md b/docs/version-specific/supported-software/m/MinCED.md index b23f7c593..21a6cb50e 100644 --- a/docs/version-specific/supported-software/m/MinCED.md +++ b/docs/version-specific/supported-software/m/MinCED.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MinCED Mining CRISPRs in Environmental Datasets @@ -7,3 +11,6 @@ Mining CRISPRs in Environmental Datasets version | versionsuffix | toolchain --------|---------------|---------- ``0.4.2`` | ``-Java-11`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MinPath.md b/docs/version-specific/supported-software/m/MinPath.md index 56d68d4da..99ed8ba8a 100644 --- a/docs/version-specific/supported-software/m/MinPath.md +++ b/docs/version-specific/supported-software/m/MinPath.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MinPath MinPath (Minimal set of Pathways) is a parsimony approach for biological pathway reconstructions using protein family predictions, achieving a more conservative, yet more faithful, estimation of the biological pathways for a query dataset. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.4`` | ``-Python-2.7.15`` | ``intel/2018b`` ``1.4`` | ``-Python-2.7.16`` | ``intel/2019b`` ``1.6`` | | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Mini-XML.md b/docs/version-specific/supported-software/m/Mini-XML.md index e547e5b55..440f2d1d9 100644 --- a/docs/version-specific/supported-software/m/Mini-XML.md +++ b/docs/version-specific/supported-software/m/Mini-XML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Mini-XML Mini-XML is a small XML parsing library that you can use to read XML data files or strings in your application without requiring large non-standard libraries @@ -10,3 +14,6 @@ version | toolchain ``2.9`` | ``GCCcore/8.2.0`` ``3.2`` | ``GCCcore/10.3.0`` ``3.3.1`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MiniCARD.md b/docs/version-specific/supported-software/m/MiniCARD.md index fb3b323dd..80d22794a 100644 --- a/docs/version-specific/supported-software/m/MiniCARD.md +++ b/docs/version-specific/supported-software/m/MiniCARD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MiniCARD MiniCARD is a *cardinality solver* based on MiniSAT [www.minisat.se]. MiniCARD handles cardinality constraints natively, using the same efficient data structures and techniques MiniSAT uses for clauses, giving it much better performance on cardinality constraints than CNF encodings of those constraints passed to a typical SAT solver. It can read the standard DIMACS CNF format, the OPB pseudo-boolean format (with linear cardinality constraints only), and CNF+, a format that extends CNF to include cardinality constraints. @@ -7,3 +11,6 @@ MiniCARD is a *cardinality solver* based on MiniSAT [www.minisat.se]. MiniCARD version | toolchain --------|---------- ``1.2`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MiniSat.md b/docs/version-specific/supported-software/m/MiniSat.md index 26d7b749a..fc5f5281f 100644 --- a/docs/version-specific/supported-software/m/MiniSat.md +++ b/docs/version-specific/supported-software/m/MiniSat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MiniSat MiniSat is a minimalistic, open-source SAT solver, developed to help researchers and developers alike to get started on SAT. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.2.0`` | ``GCC/9.3.0`` ``20130925`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Miniconda2.md b/docs/version-specific/supported-software/m/Miniconda2.md index 47291e9fe..3bbc8bca6 100644 --- a/docs/version-specific/supported-software/m/Miniconda2.md +++ b/docs/version-specific/supported-software/m/Miniconda2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Miniconda2 Miniconda is a free minimal installer for conda. It is a small, bootstrap version of Anaconda that includes only conda, Python, the packages they depend on, and a small number of other useful packages. @@ -9,3 +13,6 @@ version | toolchain ``4.3.21`` | ``system`` ``4.6.14`` | ``system`` ``4.7.10`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Miniconda3.md b/docs/version-specific/supported-software/m/Miniconda3.md index 87c16febd..7fc462ad6 100644 --- a/docs/version-specific/supported-software/m/Miniconda3.md +++ b/docs/version-specific/supported-software/m/Miniconda3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Miniconda3 Miniconda is a free minimal installer for conda. It is a small, bootstrap version of Anaconda that includes only conda, Python, the packages they depend on, and a small number of other useful packages. @@ -16,3 +20,6 @@ version | toolchain ``4.7.10`` | ``system`` ``4.8.3`` | ``system`` ``4.9.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Miniforge3.md b/docs/version-specific/supported-software/m/Miniforge3.md index bc8602711..ebf863c07 100644 --- a/docs/version-specific/supported-software/m/Miniforge3.md +++ b/docs/version-specific/supported-software/m/Miniforge3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Miniforge3 Miniforge is a free minimal installer for conda and Mamba specific to conda-forge. @@ -7,3 +11,6 @@ Miniforge is a free minimal installer for conda and Mamba specific to conda-for version | toolchain --------|---------- ``24.1.2-0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Minimac4.md b/docs/version-specific/supported-software/m/Minimac4.md index 61febe86a..805a12a49 100644 --- a/docs/version-specific/supported-software/m/Minimac4.md +++ b/docs/version-specific/supported-software/m/Minimac4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Minimac4 Minimac4 is a latest version in the series of genotype imputation software - preceded by Minimac3 (2015), Minimac2 (2014), minimac (2012) and MaCH (2010). Minimac4 is a lower memory and more computationally efficient implementation of the original algorithms with comparable imputation quality. @@ -7,3 +11,6 @@ Minimac4 is a latest version in the series of genotype imputation software - pr version | toolchain --------|---------- ``1.0.0`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Minipolish.md b/docs/version-specific/supported-software/m/Minipolish.md index 5bf6f61c1..1d4ba625b 100644 --- a/docs/version-specific/supported-software/m/Minipolish.md +++ b/docs/version-specific/supported-software/m/Minipolish.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Minipolish A tool for Racon polishing of miniasm assemblies @@ -7,3 +11,6 @@ A tool for Racon polishing of miniasm assemblies version | toolchain --------|---------- ``0.1.3`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Mish-Cuda.md b/docs/version-specific/supported-software/m/Mish-Cuda.md index 8eaf85f5c..ea1180fe5 100644 --- a/docs/version-specific/supported-software/m/Mish-Cuda.md +++ b/docs/version-specific/supported-software/m/Mish-Cuda.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Mish-Cuda Mish-Cuda: Self Regularized Non-Monotonic Activation Function @@ -7,3 +11,6 @@ Mish-Cuda: Self Regularized Non-Monotonic Activation Function version | versionsuffix | toolchain --------|---------------|---------- ``20210309`` | ``-PyTorch-1.9.0`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MitoHiFi.md b/docs/version-specific/supported-software/m/MitoHiFi.md index dfb707b28..4cd449848 100644 --- a/docs/version-specific/supported-software/m/MitoHiFi.md +++ b/docs/version-specific/supported-software/m/MitoHiFi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MitoHiFi MitoHiFi is a Python workflow that assembles mitogenomes from Pacbio HiFi reads @@ -7,3 +11,6 @@ MitoHiFi is a Python workflow that assembles mitogenomes from Pacbio HiFi reads version | toolchain --------|---------- ``3.2`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MitoZ.md b/docs/version-specific/supported-software/m/MitoZ.md index 24161f9f9..537641b29 100644 --- a/docs/version-specific/supported-software/m/MitoZ.md +++ b/docs/version-specific/supported-software/m/MitoZ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MitoZ MitoZ is a Python3-based toolkit which aims to automatically filter pair-end raw data (fastq files), assemble genome, search for mitogenome sequences from the genome assembly result, annotate mitogenome (genbank file as result), and mitogenome visualization. @@ -7,3 +11,6 @@ MitoZ is a Python3-based toolkit which aims to automatically filter pair-end raw version | versionsuffix | toolchain --------|---------------|---------- ``2.3`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MixMHC2pred.md b/docs/version-specific/supported-software/m/MixMHC2pred.md index 2a11ee5c1..847a5f0f8 100644 --- a/docs/version-specific/supported-software/m/MixMHC2pred.md +++ b/docs/version-specific/supported-software/m/MixMHC2pred.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MixMHC2pred MixMHC2pred is a predictor of HLA class II ligands and epitopes. It is described in publication Racle, J., et al. Robust prediction of HLA class II epitopes by deep motif deconvolution of immunopeptidomes @@ -7,3 +11,6 @@ MixMHC2pred is a predictor of HLA class II ligands and epitopes. It is describe version | toolchain --------|---------- ``1.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Mmg.md b/docs/version-specific/supported-software/m/Mmg.md index 4c6f41046..9c5be1c6f 100644 --- a/docs/version-specific/supported-software/m/Mmg.md +++ b/docs/version-specific/supported-software/m/Mmg.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Mmg Mmg is an open source software for simplicial remeshing. It provides 3 applications and 4 libraries: the mmg2d application and the libmmg2d library: adaptation and optimization of a two-dimensional triangulation and generation of a triangulation from a set of points or from given boundary edges the mmgs application and the libmmgs library: adaptation and optimization of a surface triangulation and isovalue discretization the mmg3d application and the libmmg3d library: adaptation and optimization of a tetrahedral mesh and implicit domain meshing the libmmg library gathering the libmmg2d, libmmgs and libmmg3d libraries @@ -10,3 +14,6 @@ version | toolchain ``5.6.0`` | ``gompi/2021a`` ``5.6.0`` | ``gompi/2021b`` ``5.7.2`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/ModelTest-NG.md b/docs/version-specific/supported-software/m/ModelTest-NG.md index 46e2e254f..326a82ffd 100644 --- a/docs/version-specific/supported-software/m/ModelTest-NG.md +++ b/docs/version-specific/supported-software/m/ModelTest-NG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ModelTest-NG ModelTest-NG is a tool for selecting the best-fit model of evolution for DNA and protein alignments. ModelTest-NG supersedes jModelTest and ProtTest in one single tool, with graphical and command console interfaces. @@ -7,3 +11,6 @@ ModelTest-NG is a tool for selecting the best-fit model of evolution for DNA and version | toolchain --------|---------- ``0.1.7`` | ``gompi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Molcas.md b/docs/version-specific/supported-software/m/Molcas.md index ee011cf13..b2cc6ed60 100644 --- a/docs/version-specific/supported-software/m/Molcas.md +++ b/docs/version-specific/supported-software/m/Molcas.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Molcas Molcas is an ab initio quantum chemistry software package developed by scientists to be used by scientists. The basic philosophy is is to be able to treat general electronic structures for molecules consisting of atoms from most of the periodic table. As such, the primary focus of the package is on multiconfigurational methods with applications typically connected to the treatment of highly degenerate states. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``8.0-15.06.18`` | ``_CentOS_6.6_x86_64`` | ``system`` ``8.2`` | ``-centos-mkl-par`` | ``system`` ``8.2`` | ``-centos-par`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Molden.md b/docs/version-specific/supported-software/m/Molden.md index 4bd41b690..a7c69ac12 100644 --- a/docs/version-specific/supported-software/m/Molden.md +++ b/docs/version-specific/supported-software/m/Molden.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Molden Molden is a package for displaying Molecular Density from the Ab Initio packages GAMESS-UK, GAMESS-US and GAUSSIAN and the Semi-Empirical packages Mopac/Ampac @@ -14,3 +18,6 @@ version | toolchain ``6.8`` | ``GCCcore/9.3.0`` ``7.1`` | ``GCCcore/11.3.0`` ``7.3`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Molekel.md b/docs/version-specific/supported-software/m/Molekel.md index 1388c91cd..d636f9cd5 100644 --- a/docs/version-specific/supported-software/m/Molekel.md +++ b/docs/version-specific/supported-software/m/Molekel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Molekel Molekel is an open-source multi-platform molecular visualization program. @@ -7,3 +11,6 @@ Molekel is an open-source multi-platform molecular visualization program. version | versionsuffix | toolchain --------|---------------|---------- ``5.4.0`` | ``-Linux_x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Molpro.md b/docs/version-specific/supported-software/m/Molpro.md index 3ca3cce7f..3f019eb5a 100644 --- a/docs/version-specific/supported-software/m/Molpro.md +++ b/docs/version-specific/supported-software/m/Molpro.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Molpro Molpro is a complete system of ab initio programs for molecular electronic structure calculations. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``2015.1.3`` | ``.linux_x86_64_openmp`` | ``system`` ``2024.1.0`` | ``.linux_x86_64_mpipr`` | ``system`` ``2024.1.0`` | ``.linux_x86_64_sockets`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Mono.md b/docs/version-specific/supported-software/m/Mono.md index 18cd4af07..58c214696 100644 --- a/docs/version-specific/supported-software/m/Mono.md +++ b/docs/version-specific/supported-software/m/Mono.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Mono An open source, cross-platform, implementation of C# and the CLR that is binary compatible with Microsoft.NET. @@ -17,3 +21,6 @@ version | toolchain ``6.12.0.122`` | ``GCCcore/11.2.0`` ``6.4.0.198`` | ``foss/2018b`` ``6.8.0.105`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Monocle3.md b/docs/version-specific/supported-software/m/Monocle3.md index 32d82001e..2e8dcafda 100644 --- a/docs/version-specific/supported-software/m/Monocle3.md +++ b/docs/version-specific/supported-software/m/Monocle3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Monocle3 An analysis toolkit for single-cell RNA-seq. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.2.3`` | ``-R-4.0.3`` | ``foss/2020b`` ``1.3.1`` | ``-R-4.2.1`` | ``foss/2022a`` ``1.3.1`` | ``-R-4.2.2`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MoreRONN.md b/docs/version-specific/supported-software/m/MoreRONN.md index 1a922a3b8..f71038fd3 100644 --- a/docs/version-specific/supported-software/m/MoreRONN.md +++ b/docs/version-specific/supported-software/m/MoreRONN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MoreRONN MoreRONN is the spiritual successor of RONN and is useful for surveying disorder in proteins as well as designing expressible constructs for X-ray crystallography. @@ -7,3 +11,6 @@ MoreRONN is the spiritual successor of RONN and is useful for surveying disorde version | toolchain --------|---------- ``4.9`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Mothur.md b/docs/version-specific/supported-software/m/Mothur.md index a4cbb1b33..222bb987e 100644 --- a/docs/version-specific/supported-software/m/Mothur.md +++ b/docs/version-specific/supported-software/m/Mothur.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Mothur Mothur is a single piece of open-source, expandable software to fill the bioinformatics needs of the microbial ecology community. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.39.5`` | ``-Python-2.7.13`` | ``intel/2017a`` ``1.41.0`` | ``-Python-2.7.15`` | ``foss/2018b`` ``1.43.0`` | ``-Python-3.7.2`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MotionCor2.md b/docs/version-specific/supported-software/m/MotionCor2.md index bcb15450f..8545a1776 100644 --- a/docs/version-specific/supported-software/m/MotionCor2.md +++ b/docs/version-specific/supported-software/m/MotionCor2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MotionCor2 MotionCor2 correct anisotropic image motion at the single pixel level across the whole frame, suitable for both single particle and tomographic images. Iterative, patch-based motion detection is combined with spatial and temporal constraints and dose weighting. Cite publication: Shawn Q. Zheng, Eugene Palovcak, Jean-Paul Armache, Yifan Cheng and David A. Agard (2016) Anisotropic Correction of Beam-induced Motion for Improved Single-particle Electron Cryo-microscopy, Nature Methods, submitted. BioArxiv: https://biorxiv.org/content/early/2016/07/04/061960 @@ -13,3 +17,6 @@ version | toolchain ``1.4.4`` | ``GCCcore/10.2.0`` ``1.4.4`` | ``GCCcore/10.3.0`` ``1.5.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MotionCor3.md b/docs/version-specific/supported-software/m/MotionCor3.md index 852042979..839731e29 100644 --- a/docs/version-specific/supported-software/m/MotionCor3.md +++ b/docs/version-specific/supported-software/m/MotionCor3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MotionCor3 Anisotropic correction of beam induced motion for cryo-electron microscopy and cryo-electron tomography images. MotionCor3, an improved implementation of MotionCor2 with addition of CTF (Contrast Transfer Function) estimation, is a multi-GPU accelerated software package that enables single-pixel level correction of anisotropic beam induced sample motion for cryo-electron microscopy and cryo-electron tomography images. The iterative, patch-based motion detection combined with spatial and temporal constraints and dose weighting provides robust and accurate correction. By refining the measurement of early motion, MotionCor3 further improves correction on tilted samples. The efficiency achieved by multi-GPU acceleration and parallelization enables correction to keep pace with automated data collection. The recent addition of a very robust GPU-accelerated CTF estimation makes MotionCor3 more versatile in cryoEM and cryoET processing pipeline. @@ -7,3 +11,6 @@ Anisotropic correction of beam induced motion for cryo-electron microscopy and version | versionsuffix | toolchain --------|---------------|---------- ``1.0.1`` | ``-CUDA-12.1.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MoviePy.md b/docs/version-specific/supported-software/m/MoviePy.md index a453d0ab0..9d9cbd2ea 100644 --- a/docs/version-specific/supported-software/m/MoviePy.md +++ b/docs/version-specific/supported-software/m/MoviePy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MoviePy MoviePy (full documentation) is a Python library for video editing: cutting, concatenations, title insertions, video compositing (a.k.a. non-linear editing), video processing, and creation of custom effects. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.0.1`` | ``-Python-3.7.2`` | ``foss/2019a`` ``1.0.3`` | | ``foss/2021a`` ``1.0.3`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MrBayes.md b/docs/version-specific/supported-software/m/MrBayes.md index 2f8edb1b4..121c1917e 100644 --- a/docs/version-specific/supported-software/m/MrBayes.md +++ b/docs/version-specific/supported-software/m/MrBayes.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MrBayes MrBayes is a program for the Bayesian estimation of phylogeny. @@ -14,3 +18,6 @@ version | toolchain ``3.2.7`` | ``gompic/2019b`` ``3.2.7a`` | ``foss/2020a`` ``3.2.7a`` | ``iimpi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MuJoCo.md b/docs/version-specific/supported-software/m/MuJoCo.md index 88658a533..7a04c16fd 100644 --- a/docs/version-specific/supported-software/m/MuJoCo.md +++ b/docs/version-specific/supported-software/m/MuJoCo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MuJoCo MuJoCo stands for Multi-Joint dynamics with Contact. It is a general purpose physics engine that aims to facilitate research and development in robotics, biomechanics, graphics and animation, machine learning, and other areas which demand fast and accurate simulation of articulated structures interacting with their environment. @@ -9,3 +13,6 @@ version | toolchain ``2.1.1`` | ``GCCcore/11.2.0`` ``2.2.2`` | ``GCCcore/11.3.0`` ``3.1.4`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MuPeXI.md b/docs/version-specific/supported-software/m/MuPeXI.md index 2193f70f0..4860714ae 100644 --- a/docs/version-specific/supported-software/m/MuPeXI.md +++ b/docs/version-specific/supported-software/m/MuPeXI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MuPeXI MuPeXI: Mutant Peptide eXtractor and Informer. Given a list of somatic mutations (VCF file) as input, MuPeXI returns a table containing all mutated peptides (neo-peptides) of user-defined lengths, along with several pieces of information relevant for identifying which of these neo-peptides are likely to serve as neo-epitopes. @@ -7,3 +11,6 @@ MuPeXI: Mutant Peptide eXtractor and Informer. Given a list of somatic mutations version | versionsuffix | toolchain --------|---------------|---------- ``1.2.0`` | ``-Perl-5.28.0-Python-2.7.15`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MuSiC.md b/docs/version-specific/supported-software/m/MuSiC.md index ccd44e5ae..248cc87aa 100644 --- a/docs/version-specific/supported-software/m/MuSiC.md +++ b/docs/version-specific/supported-software/m/MuSiC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MuSiC Multi-subject Single Cell deconvolution (MuSiC) is a deconvolution method that utilizes cross-subject scRNA-seq to estimate cell type proportions in bulk RNA-seq data. @@ -7,3 +11,6 @@ Multi-subject Single Cell deconvolution (MuSiC) is a deconvolution method that u version | versionsuffix | toolchain --------|---------------|---------- ``1.6.2`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MuTect.md b/docs/version-specific/supported-software/m/MuTect.md index 80548b2c1..84ae53e75 100644 --- a/docs/version-specific/supported-software/m/MuTect.md +++ b/docs/version-specific/supported-software/m/MuTect.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MuTect MuTect is a method developed at the Broad Institute for the reliable and accurate identification of somatic point mutations in next generation sequencing data of cancer genomes. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.1.4`` | ``-Java-1.7.0_76`` | ``system`` ``1.1.4`` | ``-Java-1.7.0_80`` | ``system`` ``1.1.7`` | ``-Java-1.7.0_80`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MultiNest.md b/docs/version-specific/supported-software/m/MultiNest.md index d4e427346..4c4cbbd41 100644 --- a/docs/version-specific/supported-software/m/MultiNest.md +++ b/docs/version-specific/supported-software/m/MultiNest.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MultiNest MultiNest is a Bayesian inference tool which calculates the evidence and explores the parameter space which may contain multiple posterior modes and pronounced (curving) degeneracies in moderately high dimensions. @@ -7,3 +11,6 @@ MultiNest is a Bayesian inference tool which calculates the evidence and explore version | toolchain --------|---------- ``3.10`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MultiQC.md b/docs/version-specific/supported-software/m/MultiQC.md index fc5ff7587..04bf425cb 100644 --- a/docs/version-specific/supported-software/m/MultiQC.md +++ b/docs/version-specific/supported-software/m/MultiQC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MultiQC Aggregate results from bioinformatics analyses across many samples into a single report. MultiQC searches a given directory for analysis logs and compiles a HTML report. It's a general use tool, perfect for summarising the output from numerous bioinformatics tools. @@ -29,3 +33,6 @@ version | versionsuffix | toolchain ``1.9`` | ``-Python-3.7.4`` | ``foss/2019b`` ``1.9`` | ``-Python-3.8.2`` | ``foss/2020a`` ``1.9`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MultilevelEstimators.md b/docs/version-specific/supported-software/m/MultilevelEstimators.md index c811ce480..925838669 100644 --- a/docs/version-specific/supported-software/m/MultilevelEstimators.md +++ b/docs/version-specific/supported-software/m/MultilevelEstimators.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MultilevelEstimators The Julia module for Multilevel Monte Carlo methods @@ -7,3 +11,6 @@ The Julia module for Multilevel Monte Carlo methods version | versionsuffix | toolchain --------|---------------|---------- ``0.1.0`` | ``-Julia-1.7.2`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Multiwfn.md b/docs/version-specific/supported-software/m/Multiwfn.md index 19c0c0fac..09da76203 100644 --- a/docs/version-specific/supported-software/m/Multiwfn.md +++ b/docs/version-specific/supported-software/m/Multiwfn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Multiwfn A multifunctional wavefunction analyzer @@ -9,3 +13,6 @@ version | toolchain ``3.4.1`` | ``intel/2017b`` ``3.6`` | ``intel/2019a`` ``3.6`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MyCC.md b/docs/version-specific/supported-software/m/MyCC.md index b74443deb..d6a5835e0 100644 --- a/docs/version-specific/supported-software/m/MyCC.md +++ b/docs/version-specific/supported-software/m/MyCC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MyCC MyCC is built and delivered as a tailored solution for metagenomics sequencesclassfication. @@ -7,3 +11,6 @@ MyCC is built and delivered as a tailored solution for metagenomics sequencescla version | versionsuffix | toolchain --------|---------------|---------- ``2017-03-01`` | ``-Python-2.7.16`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MyMediaLite.md b/docs/version-specific/supported-software/m/MyMediaLite.md index cacdaeccc..9eab201a7 100644 --- a/docs/version-specific/supported-software/m/MyMediaLite.md +++ b/docs/version-specific/supported-software/m/MyMediaLite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MyMediaLite MyMediaLite is a lightweight, multi-purpose library of recommender system algorithms. @@ -9,3 +13,6 @@ version | toolchain ``3.10`` | ``intel/2016b`` ``3.11`` | ``intel/2016b`` ``3.12`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MySQL-python.md b/docs/version-specific/supported-software/m/MySQL-python.md index 384dbee48..7a6fbd0bc 100644 --- a/docs/version-specific/supported-software/m/MySQL-python.md +++ b/docs/version-specific/supported-software/m/MySQL-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MySQL-python MySQL database connector for Python @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.2.5`` | ``-Python-2.7.11-MariaDB-10.1.14`` | ``intel/2016a`` ``1.2.5`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/MySQL.md b/docs/version-specific/supported-software/m/MySQL.md index c156c2d75..7b86f1e45 100644 --- a/docs/version-specific/supported-software/m/MySQL.md +++ b/docs/version-specific/supported-software/m/MySQL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # MySQL MySQL is (as of March 2014) the world's second most widely used open-source relational database management system (RDBMS). @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``5.6.26`` | ``-clientonly`` | ``GNU/4.9.3-2.25`` ``5.7.21`` | ``-clientonly`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/Myokit.md b/docs/version-specific/supported-software/m/Myokit.md index 16aaa5e9c..249617782 100644 --- a/docs/version-specific/supported-software/m/Myokit.md +++ b/docs/version-specific/supported-software/m/Myokit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Myokit Myokit is an open-source Python-based toolkit that facilitates modeling and simulation of cardiac cellular electrophysiology. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.32.0`` | ``foss/2020b`` ``1.32.0`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/index.md b/docs/version-specific/supported-software/m/index.md index 33ec321fd..e58764f79 100644 --- a/docs/version-specific/supported-software/m/index.md +++ b/docs/version-specific/supported-software/m/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (m) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - *m* - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [M1QN3](M1QN3.md) * [M3GNet](M3GNet.md) * [M4](M4.md) diff --git a/docs/version-specific/supported-software/m/m4ri.md b/docs/version-specific/supported-software/m/m4ri.md index f76c71dad..d841a1116 100644 --- a/docs/version-specific/supported-software/m/m4ri.md +++ b/docs/version-specific/supported-software/m/m4ri.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # m4ri M4RI is a library for fast arithmetic with dense matrices over F2. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20200125`` | ``GCC/11.3.0`` ``20200125`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/m4rie.md b/docs/version-specific/supported-software/m/m4rie.md index dac27d946..2b6226765 100644 --- a/docs/version-specific/supported-software/m/m4rie.md +++ b/docs/version-specific/supported-software/m/m4rie.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # m4rie M4RIE is a library for fast arithmetic with dense matrices. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20200125`` | ``GCC/11.3.0`` ``20200125`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/maeparser.md b/docs/version-specific/supported-software/m/maeparser.md index 5d5409e9e..e807e6cf5 100644 --- a/docs/version-specific/supported-software/m/maeparser.md +++ b/docs/version-specific/supported-software/m/maeparser.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # maeparser maeparser is a parser for Schrodinger Maestro files. @@ -13,3 +17,6 @@ version | toolchain ``1.3.0`` | ``gompi/2022a`` ``1.3.0`` | ``iimpi/2020a`` ``1.3.1`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/magick.md b/docs/version-specific/supported-software/m/magick.md index 2c51d018f..654411ae3 100644 --- a/docs/version-specific/supported-software/m/magick.md +++ b/docs/version-specific/supported-software/m/magick.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # magick R bindings to the open-source image processing library ImageMagick @@ -7,3 +11,6 @@ R bindings to the open-source image processing library ImageMagick version | versionsuffix | toolchain --------|---------------|---------- ``2.0`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/magma.md b/docs/version-specific/supported-software/m/magma.md index dc89f05c9..aa3b177a6 100644 --- a/docs/version-specific/supported-software/m/magma.md +++ b/docs/version-specific/supported-software/m/magma.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # magma The MAGMA project aims to develop a dense linear algebra library similar to LAPACK but for heterogeneous/hybrid architectures, starting with current Multicore+GPU systems. @@ -27,3 +31,6 @@ version | versionsuffix | toolchain ``2.7.1`` | ``-CUDA-12.0.0`` | ``foss/2022b`` ``2.7.2`` | ``-CUDA-12.1.1`` | ``foss/2023a`` ``2.7.2`` | ``-CUDA-12.4.0`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mahotas.md b/docs/version-specific/supported-software/m/mahotas.md index 719fe599a..9ec450493 100644 --- a/docs/version-specific/supported-software/m/mahotas.md +++ b/docs/version-specific/supported-software/m/mahotas.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mahotas Mahotas is a computer vision and image processing library for Python @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.4.13`` | | ``foss/2022a`` ``1.4.3`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/make.md b/docs/version-specific/supported-software/m/make.md index 80072d97e..d41db3766 100644 --- a/docs/version-specific/supported-software/m/make.md +++ b/docs/version-specific/supported-software/m/make.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # make make-3.82: GNU version of make utility @@ -20,3 +24,6 @@ version | toolchain ``4.4.1`` | ``GCCcore/12.3.0`` ``4.4.1`` | ``GCCcore/13.2.0`` ``4.4.1`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/makedepend.md b/docs/version-specific/supported-software/m/makedepend.md index 10024226a..d4e3f8452 100644 --- a/docs/version-specific/supported-software/m/makedepend.md +++ b/docs/version-specific/supported-software/m/makedepend.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # makedepend The makedepend package contains a C-preprocessor like utility to determine build-time dependencies. @@ -18,3 +22,6 @@ version | toolchain ``1.0.6`` | ``GCCcore/9.3.0`` ``1.0.7`` | ``GCCcore/11.3.0`` ``1.0.7`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/makedepf90.md b/docs/version-specific/supported-software/m/makedepf90.md index ff406a2cf..edab0b88a 100644 --- a/docs/version-specific/supported-software/m/makedepf90.md +++ b/docs/version-specific/supported-software/m/makedepf90.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # makedepf90 Makedepf90 is a program for automatic creation of Makefile-style dependency lists for Fortran source code. @@ -7,3 +11,6 @@ Makedepf90 is a program for automatic creation of Makefile-style dependency lis version | toolchain --------|---------- ``2.8.8`` | ``foss/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/makefun.md b/docs/version-specific/supported-software/m/makefun.md index 36605dd9c..d385b2d42 100644 --- a/docs/version-specific/supported-software/m/makefun.md +++ b/docs/version-specific/supported-software/m/makefun.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # makefun Small library to dynamically create python functions. makefun helps you create functions dynamically, with the signature of your choice. It was largely inspired by decorator and functools, and created mainly to cover some of their limitations. @@ -7,3 +11,6 @@ Small library to dynamically create python functions. makefun helps you create f version | toolchain --------|---------- ``1.15.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/makeinfo.md b/docs/version-specific/supported-software/m/makeinfo.md index 3369b83fe..51567acd1 100644 --- a/docs/version-specific/supported-software/m/makeinfo.md +++ b/docs/version-specific/supported-software/m/makeinfo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # makeinfo makeinfo is part of the Texinfo project, the official documentation format of the GNU project. @@ -21,3 +25,6 @@ version | versionsuffix | toolchain ``7.0.3`` | | ``GCCcore/12.3.0`` ``7.1`` | | ``GCCcore/13.2.0`` ``7.1`` | | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mandrake.md b/docs/version-specific/supported-software/m/mandrake.md index 57a2c82b7..930938cb1 100644 --- a/docs/version-specific/supported-software/m/mandrake.md +++ b/docs/version-specific/supported-software/m/mandrake.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mandrake Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding. @@ -7,3 +11,6 @@ Fast visualisation of the population structure of pathogens using Stochastic Cl version | toolchain --------|---------- ``1.2.2`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mannkendall.md b/docs/version-specific/supported-software/m/mannkendall.md index f00867f8a..c190d1de9 100644 --- a/docs/version-specific/supported-software/m/mannkendall.md +++ b/docs/version-specific/supported-software/m/mannkendall.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mannkendall A python package for non parametric Mann Kendall family of trend tests. @@ -7,3 +11,6 @@ A python package for non parametric Mann Kendall family of trend tests. version | toolchain --------|---------- ``1.1.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/manta.md b/docs/version-specific/supported-software/m/manta.md index c1fd0bb84..56def927c 100644 --- a/docs/version-specific/supported-software/m/manta.md +++ b/docs/version-specific/supported-software/m/manta.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # manta Manta calls structural variants (SVs) and indels from mapped paired-end sequencing reads. It is optimized for analysis of germline variation in small sets of individuals and somatic variation in tumor/normal sample pairs. Manta discovers, assembles and scores large-scale SVs, medium-sized indels and large insertions within a single efficient workflow. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``1.6.0`` | ``-Python-2.7.16`` | ``gompi/2019b`` ``1.6.0`` | ``-Python-2.7.18`` | ``gompi/2020a`` ``1.6.0`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mapDamage.md b/docs/version-specific/supported-software/m/mapDamage.md index d87d2ad20..25292d112 100644 --- a/docs/version-specific/supported-software/m/mapDamage.md +++ b/docs/version-specific/supported-software/m/mapDamage.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mapDamage mapDamage2 is a computational framework written in Python and R, which tracks and quantifies DNA damage patterns among ancient DNA sequencing reads generated by Next-Generation Sequencing platforms. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.2.1`` | ``-R-4.1.0`` | ``foss/2021a`` ``2.2.1`` | | ``foss/2021b`` ``2.2.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/matlab-proxy.md b/docs/version-specific/supported-software/m/matlab-proxy.md index 24d214fa1..f1b031543 100644 --- a/docs/version-specific/supported-software/m/matlab-proxy.md +++ b/docs/version-specific/supported-software/m/matlab-proxy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # matlab-proxy A Python package which enables you to launch MATLAB and access it from a web browser. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.18.1`` | ``GCCcore/12.3.0`` ``0.5.4`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/matplotlib-inline.md b/docs/version-specific/supported-software/m/matplotlib-inline.md index 7e2ea8592..8cfac5d18 100644 --- a/docs/version-specific/supported-software/m/matplotlib-inline.md +++ b/docs/version-specific/supported-software/m/matplotlib-inline.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # matplotlib-inline Matplotlib Inline Back-end for IPython and Jupyter. @@ -7,3 +11,6 @@ Matplotlib Inline Back-end for IPython and Jupyter. version | toolchain --------|---------- ``0.1.3`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/matplotlib.md b/docs/version-specific/supported-software/m/matplotlib.md index 2ee13a59b..21accf409 100644 --- a/docs/version-specific/supported-software/m/matplotlib.md +++ b/docs/version-specific/supported-software/m/matplotlib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # matplotlib matplotlib is a python 2D plotting library which produces publication quality figures in a variety of hardcopy formats and interactive environments across platforms. matplotlib can be used in python scripts, the python and ipython shell, web application servers, and six graphical user interface toolkits. @@ -102,3 +106,6 @@ version | versionsuffix | toolchain ``3.7.2`` | | ``gfbf/2023a`` ``3.7.2`` | | ``iimkl/2023a`` ``3.8.2`` | | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/maturin.md b/docs/version-specific/supported-software/m/maturin.md index a83fb7cfa..2c3a06ff3 100644 --- a/docs/version-specific/supported-software/m/maturin.md +++ b/docs/version-specific/supported-software/m/maturin.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # maturin This project is meant as a zero configuration replacement for setuptools-rust and milksnake. It supports building wheels for python 3.5+ on windows, linux, mac and freebsd, can upload them to pypi and has basic pypy and graalpy support. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``1.4.0`` | ``-Rust-1.75.0`` | ``GCCcore/12.2.0`` ``1.4.0`` | ``-Rust-1.75.0`` | ``GCCcore/12.3.0`` ``1.5.0`` | ``-Rust-1.76.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mauveAligner.md b/docs/version-specific/supported-software/m/mauveAligner.md index 7613e83f4..188674c4c 100644 --- a/docs/version-specific/supported-software/m/mauveAligner.md +++ b/docs/version-specific/supported-software/m/mauveAligner.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mauveAligner Mauve is a system for constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion. Multiple genome alignments provide a basis for research into comparative genomics and the study of genome-wide evolutionary dynamics. This version was built without Graphical User Interface. @@ -7,3 +11,6 @@ Mauve is a system for constructing multiple genome alignments in the presence of version | toolchain --------|---------- ``4736`` | ``gompi/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mawk.md b/docs/version-specific/supported-software/m/mawk.md index 1b3d77bcd..804abdadc 100644 --- a/docs/version-specific/supported-software/m/mawk.md +++ b/docs/version-specific/supported-software/m/mawk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mawk mawk is an interpreter for the AWK Programming Language. @@ -13,3 +17,6 @@ version | toolchain ``1.3.4-20171017`` | ``intel/2018a`` ``1.3.4-20171017`` | ``intel/2018b`` ``1.3.4-20171017`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mayavi.md b/docs/version-specific/supported-software/m/mayavi.md index 61067921c..37d3ff743 100644 --- a/docs/version-specific/supported-software/m/mayavi.md +++ b/docs/version-specific/supported-software/m/mayavi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mayavi The Mayavi scientific data 3-dimensional visualizer @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``4.7.1`` | ``-Python-2.7.15`` | ``foss/2019a`` ``4.7.1`` | ``-Python-3.7.2`` | ``foss/2019a`` ``4.7.4`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/maze.md b/docs/version-specific/supported-software/m/maze.md index 67e9585fb..b880ab7f7 100644 --- a/docs/version-specific/supported-software/m/maze.md +++ b/docs/version-specific/supported-software/m/maze.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # maze In a similar manner to dot plots, maze highlights local sequence similarity between two DNA sequences. In particular, maximal exact substring matches are computed with MUMmer3 and visualised. @@ -7,3 +11,6 @@ In a similar manner to dot plots, maze highlights local sequence similarity betw version | toolchain --------|---------- ``20170124`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mbuffer.md b/docs/version-specific/supported-software/m/mbuffer.md index ac89883a6..2e533d3a8 100644 --- a/docs/version-specific/supported-software/m/mbuffer.md +++ b/docs/version-specific/supported-software/m/mbuffer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mbuffer mbuffer is a tool for buffering data streams with a large set of unique features. @@ -7,3 +11,6 @@ mbuffer is a tool for buffering data streams with a large set of unique features version | toolchain --------|---------- ``20191016`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mc.md b/docs/version-specific/supported-software/m/mc.md index d1c27fe0f..7a8cc9b61 100644 --- a/docs/version-specific/supported-software/m/mc.md +++ b/docs/version-specific/supported-software/m/mc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mc mc-4.6.1: User-friendly file manager and visual shell @@ -7,3 +11,6 @@ mc-4.6.1: User-friendly file manager and visual shell version | toolchain --------|---------- ``4.8.13`` | ``GCC/4.9.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mctc-lib.md b/docs/version-specific/supported-software/m/mctc-lib.md index 82fc946b1..230b10d28 100644 --- a/docs/version-specific/supported-software/m/mctc-lib.md +++ b/docs/version-specific/supported-software/m/mctc-lib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mctc-lib Common tool chain for working with molecular structure data in various applications. This library provides a unified way to perform operations on molecular structure data, like reading and writing to common geometry file formats. @@ -10,3 +14,6 @@ version | toolchain ``0.3.1`` | ``GCC/12.2.0`` ``0.3.1`` | ``intel-compilers/2022.1.0`` ``0.3.1`` | ``intel-compilers/2022.2.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mcu.md b/docs/version-specific/supported-software/m/mcu.md index df7f88de4..065bdcd7a 100644 --- a/docs/version-specific/supported-software/m/mcu.md +++ b/docs/version-specific/supported-software/m/mcu.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mcu A package for periodic wavefunction and crystallography analysis. mcu is designed to support large scale analysis and topological descriptions for periodic wavefunction. @@ -7,3 +11,6 @@ A package for periodic wavefunction and crystallography analysis. mcu is design version | toolchain --------|---------- ``2021-04-06`` | ``gomkl/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mdtest.md b/docs/version-specific/supported-software/m/mdtest.md index 4c3484c71..c02d7964f 100644 --- a/docs/version-specific/supported-software/m/mdtest.md +++ b/docs/version-specific/supported-software/m/mdtest.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mdtest mdtest is an MPI-coordinated metadata benchmark test that performs open/stat/close operations on files and directories and then reports the performance. @@ -7,3 +11,6 @@ mdtest is an MPI-coordinated metadata benchmark test that performs open/stat/c version | toolchain --------|---------- ``1.9.3`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mdust.md b/docs/version-specific/supported-software/m/mdust.md index 118fccd95..97363b463 100644 --- a/docs/version-specific/supported-software/m/mdust.md +++ b/docs/version-specific/supported-software/m/mdust.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mdust mdust from DFCI Gene Indices Software Tools (archived for a historical record only) @@ -7,3 +11,6 @@ mdust from DFCI Gene Indices Software Tools (archived for a historical record on version | toolchain --------|---------- ``20150102`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/meRanTK.md b/docs/version-specific/supported-software/m/meRanTK.md index ff104a313..3e0359f6f 100644 --- a/docs/version-specific/supported-software/m/meRanTK.md +++ b/docs/version-specific/supported-software/m/meRanTK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # meRanTK meRanTK is a versatile high performance toolkit for complete analysis of methylated RNA data. @@ -7,3 +11,6 @@ meRanTK is a versatile high performance toolkit for complete analysis of methyla version | toolchain --------|---------- ``1.1.1b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/meboot.md b/docs/version-specific/supported-software/m/meboot.md index dddda088e..8fe3004eb 100644 --- a/docs/version-specific/supported-software/m/meboot.md +++ b/docs/version-specific/supported-software/m/meboot.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # meboot Maximum entropy density based dependent data bootstrap. An algorithm is provided to create a population of time series (ensemble) without assuming stationarity. @@ -7,3 +11,6 @@ Maximum entropy density based dependent data bootstrap. An algorithm is provide version | versionsuffix | toolchain --------|---------------|---------- ``1.4-9.2`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/medImgProc.md b/docs/version-specific/supported-software/m/medImgProc.md index 780b19337..e3cb60e91 100644 --- a/docs/version-specific/supported-software/m/medImgProc.md +++ b/docs/version-specific/supported-software/m/medImgProc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # medImgProc Motion correction, explicit spatio-temporal regularization of motion tracking, random speckles enhancement, and segmentation. @@ -7,3 +11,6 @@ Motion correction, explicit spatio-temporal regularization of motion tracking, r version | versionsuffix | toolchain --------|---------------|---------- ``2.5.7`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/medaka.md b/docs/version-specific/supported-software/m/medaka.md index 86055b6f0..8cdd5e11b 100644 --- a/docs/version-specific/supported-software/m/medaka.md +++ b/docs/version-specific/supported-software/m/medaka.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # medaka medaka is a tool to create a consensus sequence from nanopore sequencing data. @@ -21,3 +25,6 @@ version | versionsuffix | toolchain ``1.8.1`` | | ``foss/2022a`` ``1.9.1`` | | ``foss/2022a`` ``1.9.1`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/memkind.md b/docs/version-specific/supported-software/m/memkind.md index 802946b10..60614c104 100644 --- a/docs/version-specific/supported-software/m/memkind.md +++ b/docs/version-specific/supported-software/m/memkind.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # memkind User Extensible Heap Manager built on top of jemalloc which enables control of memory characteristics and a partitioning of the heap between kinds of memory. @@ -7,3 +11,6 @@ User Extensible Heap Manager built on top of jemalloc which enables control of m version | toolchain --------|---------- ``1.5.0`` | ``GCCcore/5.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/memory-profiler.md b/docs/version-specific/supported-software/m/memory-profiler.md index 8adf1e1b5..4c3715e44 100644 --- a/docs/version-specific/supported-software/m/memory-profiler.md +++ b/docs/version-specific/supported-software/m/memory-profiler.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # memory-profiler memory-profiler is a Python module for monitoring memory consumption of a process as well as line-by-line analysis of memory consumption for python programs. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.55.0`` | ``foss/2019a`` ``0.55.0`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/memtester.md b/docs/version-specific/supported-software/m/memtester.md index f7f96da28..f268d872e 100644 --- a/docs/version-specific/supported-software/m/memtester.md +++ b/docs/version-specific/supported-software/m/memtester.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # memtester A userspace utility for testing the memory subsystem for faults @@ -7,3 +11,6 @@ A userspace utility for testing the memory subsystem for faults version | toolchain --------|---------- ``4.5.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/meshalyzer.md b/docs/version-specific/supported-software/m/meshalyzer.md index 87c25055d..54238eec7 100644 --- a/docs/version-specific/supported-software/m/meshalyzer.md +++ b/docs/version-specific/supported-software/m/meshalyzer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # meshalyzer Graphical program for display time dependent data on 3D finite elment meshes @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``2.2`` | | ``foss/2020b`` ``20200308`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/meshio.md b/docs/version-specific/supported-software/m/meshio.md index b019acc79..9ba6f1e1b 100644 --- a/docs/version-specific/supported-software/m/meshio.md +++ b/docs/version-specific/supported-software/m/meshio.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # meshio meshio is a tool for reading/writing various mesh formats representing unstructured meshes @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.0.2`` | ``-Python-2.7.14`` | ``intel/2018a`` ``2.0.2`` | ``-Python-3.6.4`` | ``intel/2018a`` ``5.3.4`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/meshtool.md b/docs/version-specific/supported-software/m/meshtool.md index 41df0cc82..af3eb8612 100644 --- a/docs/version-specific/supported-software/m/meshtool.md +++ b/docs/version-specific/supported-software/m/meshtool.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # meshtool Meshtool is a comand-line tool written in C++. It is designed to apply various manipulations to volumetric meshes. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``16`` | ``GCC/10.2.0`` ``16`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/meson-python.md b/docs/version-specific/supported-software/m/meson-python.md index 78b698703..e56669e05 100644 --- a/docs/version-specific/supported-software/m/meson-python.md +++ b/docs/version-specific/supported-software/m/meson-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # meson-python Python build backend (PEP 517) for Meson projects @@ -10,3 +14,6 @@ version | toolchain ``0.13.2`` | ``GCCcore/12.3.0`` ``0.15.0`` | ``GCCcore/12.3.0`` ``0.15.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/metaWRAP.md b/docs/version-specific/supported-software/m/metaWRAP.md index 97d34baf3..c0aaeb243 100644 --- a/docs/version-specific/supported-software/m/metaWRAP.md +++ b/docs/version-specific/supported-software/m/metaWRAP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # metaWRAP MetaWRAP aims to be an easy-to-use metagenomic wrapper suite that accomplishes the core tasks of metagenomic analysis from start to finish: read quality control, assembly, visualization, taxonomic profiling, extracting draft genomes (binning), and functional annotation. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.2`` | ``-Python-2.7.15`` | ``foss/2018b`` ``1.2.2`` | ``-Python-2.7.15`` | ``foss/2019a`` ``1.3`` | ``-Python-2.7.18`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/metaerg.md b/docs/version-specific/supported-software/m/metaerg.md index 1354f8351..af0bd85a0 100644 --- a/docs/version-specific/supported-software/m/metaerg.md +++ b/docs/version-specific/supported-software/m/metaerg.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # metaerg MetaErg is a stand-alone and fully automated metagenomic and metaproteomic data annotation pipeline. @@ -7,3 +11,6 @@ MetaErg is a stand-alone and fully automated metagenomic and metaproteomic data version | versionsuffix | toolchain --------|---------------|---------- ``1.2.3`` | ``-Python-2.7.16`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/methylartist.md b/docs/version-specific/supported-software/m/methylartist.md index c744ac64c..7560ab392 100644 --- a/docs/version-specific/supported-software/m/methylartist.md +++ b/docs/version-specific/supported-software/m/methylartist.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # methylartist Tools for plotting methylation data in various ways @@ -7,3 +11,6 @@ Tools for plotting methylation data in various ways version | toolchain --------|---------- ``1.2.6`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/methylpy.md b/docs/version-specific/supported-software/m/methylpy.md index f9d52b40f..79bc8a6a0 100644 --- a/docs/version-specific/supported-software/m/methylpy.md +++ b/docs/version-specific/supported-software/m/methylpy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # methylpy Bisulfite sequencing data processing and differential methylation analysis. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.1.9`` | ``-Python-2.7.13`` | ``foss/2017a`` ``1.2.9`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mfqe.md b/docs/version-specific/supported-software/m/mfqe.md index d735d35c3..2ab0dec5c 100644 --- a/docs/version-specific/supported-software/m/mfqe.md +++ b/docs/version-specific/supported-software/m/mfqe.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mfqe extract one or more sets of reads from a FASTQ (or FASTA) file by specifying their read names. @@ -7,3 +11,6 @@ extract one or more sets of reads from a FASTQ (or FASTA) file by specifying the version | toolchain --------|---------- ``0.5.0`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mgen.md b/docs/version-specific/supported-software/m/mgen.md index 0b2958a15..522fb4541 100644 --- a/docs/version-specific/supported-software/m/mgen.md +++ b/docs/version-specific/supported-software/m/mgen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mgen Convenient matrix generation functions @@ -7,3 +11,6 @@ Convenient matrix generation functions version | toolchain --------|---------- ``1.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mgltools.md b/docs/version-specific/supported-software/m/mgltools.md index 970e258ce..f4db668d8 100644 --- a/docs/version-specific/supported-software/m/mgltools.md +++ b/docs/version-specific/supported-software/m/mgltools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mgltools The MGLTools software suite can be used for visualization and analysis of molecular structures and comprises the Python Molecular Viewer (PMV, a general purpose molecular viewer), AutoDockTools (ADT, a set of PMV commands specifically developed to support AutoDock users) and Vision (a visual programming environment). @@ -7,3 +11,6 @@ The MGLTools software suite can be used for visualization and analysis of mo version | toolchain --------|---------- ``1.5.7`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mhcflurry.md b/docs/version-specific/supported-software/m/mhcflurry.md index 2d6dd92d9..1670b35b0 100644 --- a/docs/version-specific/supported-software/m/mhcflurry.md +++ b/docs/version-specific/supported-software/m/mhcflurry.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mhcflurry MHCflurry implements class I peptide/MHC binding affinity prediction. By default it supports 112 MHC alleles using ensembles of allele-specific models. Pan-allele predictors supporting virtually any MHC allele of known sequence are available for testing (see below). MHCflurry runs on Python 2.7 and 3.4+ using the keras neural network library. It exposes command-line and Python library interfaces. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.2.4`` | ``-Python-3.7.2`` | ``foss/2019a`` ``1.2.4`` | ``-Python-3.7.2`` | ``fosscuda/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mhcnuggets.md b/docs/version-specific/supported-software/m/mhcnuggets.md index b593c7a77..34cb95696 100644 --- a/docs/version-specific/supported-software/m/mhcnuggets.md +++ b/docs/version-specific/supported-software/m/mhcnuggets.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mhcnuggets MHCnuggets: Neoantigen peptide MHC binding prediction for class I and II. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.3`` | | ``foss/2020b`` ``2.3`` | ``-Python-3.7.2`` | ``fosscuda/2019a`` ``2.3`` | | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/miRDeep2.md b/docs/version-specific/supported-software/m/miRDeep2.md index 2a2374b5d..ebbd6f6ee 100644 --- a/docs/version-specific/supported-software/m/miRDeep2.md +++ b/docs/version-specific/supported-software/m/miRDeep2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # miRDeep2 miRDeep2 is a completely overhauled tool which discovers microRNA genes by analyzing sequenced RNAs @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.1.1`` | ``-Python-3.6.6`` | ``foss/2018b`` ``2.0.0.8`` | | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/microctools.md b/docs/version-specific/supported-software/m/microctools.md index ec100ba79..58b42b064 100644 --- a/docs/version-specific/supported-software/m/microctools.md +++ b/docs/version-specific/supported-software/m/microctools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # microctools Various worker functions for microclimc package @@ -7,3 +11,6 @@ Various worker functions for microclimc package version | versionsuffix | toolchain --------|---------------|---------- ``0.1.0-20201209`` | ``-R-4.0.4`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mimalloc.md b/docs/version-specific/supported-software/m/mimalloc.md index c3c1b85b3..cd11b99aa 100644 --- a/docs/version-specific/supported-software/m/mimalloc.md +++ b/docs/version-specific/supported-software/m/mimalloc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mimalloc mimalloc is a general purpose allocator with excellent performance characteristics. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.7.2`` | ``GCCcore/10.3.0`` ``1.7.2`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/miniasm.md b/docs/version-specific/supported-software/m/miniasm.md index 5f4342932..9d6bc506e 100644 --- a/docs/version-specific/supported-software/m/miniasm.md +++ b/docs/version-specific/supported-software/m/miniasm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # miniasm Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. It simply concatenates pieces of read sequences to generate the final unitig sequences. Thus the per-base error rate is similar to the raw input reads. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.3-20191007`` | ``GCCcore/10.3.0`` ``0.3-20191007`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/minibar.md b/docs/version-specific/supported-software/m/minibar.md index ee12afea6..462536424 100644 --- a/docs/version-specific/supported-software/m/minibar.md +++ b/docs/version-specific/supported-software/m/minibar.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # minibar Dual barcode and primer demultiplexing for MinION sequenced reads @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``20200326`` | ``-Python-3.7.4`` | ``iccifort/2019.5.281`` ``20200326`` | ``-Python-3.8.2`` | ``iccifort/2020.1.217`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/minieigen.md b/docs/version-specific/supported-software/m/minieigen.md index da1c4ba3f..488185bb5 100644 --- a/docs/version-specific/supported-software/m/minieigen.md +++ b/docs/version-specific/supported-software/m/minieigen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # minieigen A small wrapper for core parts of EIgen, c++ library for linear algebra. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``0.5.3`` | ``-Python-2.7.12-Boost-1.63.0`` | ``intel/2016b`` ``0.5.3`` | ``-Python-2.7.12`` | ``intel/2016b`` ``0.5.4`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/minimap2.md b/docs/version-specific/supported-software/m/minimap2.md index cd5458836..96fdfda04 100644 --- a/docs/version-specific/supported-software/m/minimap2.md +++ b/docs/version-specific/supported-software/m/minimap2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # minimap2 Minimap2 is a fast sequence mapping and alignment program that can find overlaps between long noisy reads, or map long reads or their assemblies to a reference genome optionally with detailed alignment (i.e. CIGAR). At present, it works efficiently with query sequences from a few kilobases to ~100 megabases in length at an error rate ~15%. Minimap2 outputs in the PAF or the SAM format. On limited test data sets, minimap2 is over 20 times faster than most other long-read aligners. It will replace BWA-MEM for long reads and contig alignment. @@ -22,3 +26,6 @@ version | toolchain ``2.24`` | ``GCCcore/11.3.0`` ``2.26`` | ``GCCcore/12.2.0`` ``2.26`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/minizip.md b/docs/version-specific/supported-software/m/minizip.md index e5b96b699..3d4afa30f 100644 --- a/docs/version-specific/supported-software/m/minizip.md +++ b/docs/version-specific/supported-software/m/minizip.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # minizip Mini zip and unzip based on zlib @@ -7,3 +11,6 @@ Mini zip and unzip based on zlib version | toolchain --------|---------- ``1.1`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/misha.md b/docs/version-specific/supported-software/m/misha.md index 34bae904c..8c4cd318e 100644 --- a/docs/version-specific/supported-software/m/misha.md +++ b/docs/version-specific/supported-software/m/misha.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # misha The misha package is intended to help users to efficiently analyze genomic data achieved from various experiments. @@ -7,3 +11,6 @@ The misha package is intended to help users to efficiently analyze genomic data version | versionsuffix | toolchain --------|---------------|---------- ``4.0.10`` | ``-R-4.0.0`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mkl-dnn.md b/docs/version-specific/supported-software/m/mkl-dnn.md index 043495e07..9055a3cf7 100644 --- a/docs/version-specific/supported-software/m/mkl-dnn.md +++ b/docs/version-specific/supported-software/m/mkl-dnn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mkl-dnn Intel(R) Math Kernel Library for Deep Neural Networks (Intel(R) MKL-DNN) @@ -11,3 +15,6 @@ version | toolchain ``0.16`` | ``foss/2018b`` ``0.16`` | ``intel/2018b`` ``0.17.2`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mkl-service.md b/docs/version-specific/supported-software/m/mkl-service.md index f0162a959..4838a193c 100644 --- a/docs/version-specific/supported-software/m/mkl-service.md +++ b/docs/version-specific/supported-software/m/mkl-service.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mkl-service Python hooks for Intel(R) Math Kernel Library runtime control settings. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.3.0`` | ``-Python-3.7.4`` | ``intel/2019b`` ``2.3.0`` | | ``intel/2020b`` ``2.3.0`` | | ``intel/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mkl_fft.md b/docs/version-specific/supported-software/m/mkl_fft.md index 171ce9a65..78aa87479 100644 --- a/docs/version-specific/supported-software/m/mkl_fft.md +++ b/docs/version-specific/supported-software/m/mkl_fft.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mkl_fft NumPy-based Python interface to Intel(R) MKL FFT functionality @@ -7,3 +11,6 @@ NumPy-based Python interface to Intel(R) MKL FFT functionality version | versionsuffix | toolchain --------|---------------|---------- ``1.0.14`` | ``-Python-3.6.6`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/ml-collections.md b/docs/version-specific/supported-software/m/ml-collections.md index 9be776cd2..6aa4965ad 100644 --- a/docs/version-specific/supported-software/m/ml-collections.md +++ b/docs/version-specific/supported-software/m/ml-collections.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ml-collections ML Collections is a library of Python Collections designed for ML use cases. @@ -7,3 +11,6 @@ ML Collections is a library of Python Collections designed for ML use cases. version | toolchain --------|---------- ``0.1.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/ml_dtypes.md b/docs/version-specific/supported-software/m/ml_dtypes.md index ae23f98c5..15b26d974 100644 --- a/docs/version-specific/supported-software/m/ml_dtypes.md +++ b/docs/version-specific/supported-software/m/ml_dtypes.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ml_dtypes ml_dtypes is a stand-alone implementation of several NumPy dtype extensions used in machine learning libraries, including: bfloat16: an alternative to the standard float16 format float8_*: several experimental 8-bit floating point representations including: float8_e4m3b11fnuz float8_e4m3fn float8_e4m3fnuz float8_e5m2 float8_e5m2fnuz @@ -7,3 +11,6 @@ ml_dtypes is a stand-alone implementation of several NumPy dtype extensions used version | toolchain --------|---------- ``0.3.2`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mlpack.md b/docs/version-specific/supported-software/m/mlpack.md index c8693a207..8cef98dd2 100644 --- a/docs/version-specific/supported-software/m/mlpack.md +++ b/docs/version-specific/supported-software/m/mlpack.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mlpack mlpack is a fast, header-only C++ machine learning library written in C++ and built on the Armadillo linear algebra library, the ensmallen numerical optimization library, and the cereal serialization library. @@ -7,3 +11,6 @@ mlpack is a fast, header-only C++ machine learning library written in C++ and bu version | toolchain --------|---------- ``4.3.0`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mm-common.md b/docs/version-specific/supported-software/m/mm-common.md index b06e9cdde..7e2e2e911 100644 --- a/docs/version-specific/supported-software/m/mm-common.md +++ b/docs/version-specific/supported-software/m/mm-common.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mm-common The mm-common module provides the build infrastructure and utilities shared among the GNOME C++ binding libraries. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.4`` | ``GCCcore/10.3.0`` ``1.0.5`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mmtf-cpp.md b/docs/version-specific/supported-software/m/mmtf-cpp.md index 997a10d9f..e8688ac84 100644 --- a/docs/version-specific/supported-software/m/mmtf-cpp.md +++ b/docs/version-specific/supported-software/m/mmtf-cpp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mmtf-cpp The Macromolecular Transmission Format (MMTF) is a new compact binary format to transmit and store biomolecular structures for fast 3D visualization and analysis. @@ -7,3 +11,6 @@ The Macromolecular Transmission Format (MMTF) is a new compact binary format to version | toolchain --------|---------- ``1.0.0`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/modred.md b/docs/version-specific/supported-software/m/modred.md index 30e6639fb..ed5059a7b 100644 --- a/docs/version-specific/supported-software/m/modred.md +++ b/docs/version-specific/supported-software/m/modred.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # modred Compute modal decompositions and reduced-order models, easily, efficiently, and in parallel. @@ -7,3 +11,6 @@ Compute modal decompositions and reduced-order models, easily, efficiently, and version | versionsuffix | toolchain --------|---------------|---------- ``2.0.2`` | ``-Python-3.5.2`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mold.md b/docs/version-specific/supported-software/m/mold.md index e1fbfbce4..90989a0ec 100644 --- a/docs/version-specific/supported-software/m/mold.md +++ b/docs/version-specific/supported-software/m/mold.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mold mold is a high-performance drop-in replacement for existing Unix linkers. @@ -14,3 +18,6 @@ version | toolchain ``1.7.1`` | ``GCCcore/12.2.0`` ``2.3.1`` | ``GCCcore/13.2.0`` ``2.31.0`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/molecularGSM.md b/docs/version-specific/supported-software/m/molecularGSM.md index 98eb3adc4..f002e9f1b 100644 --- a/docs/version-specific/supported-software/m/molecularGSM.md +++ b/docs/version-specific/supported-software/m/molecularGSM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # molecularGSM Code for single-ended and double-ended molecular GSM. The growing string method is a reaction path and transition state finding method developed in c++. @@ -7,3 +11,6 @@ Code for single-ended and double-ended molecular GSM. The growing string method version | toolchain --------|---------- ``20190826`` | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/molmod.md b/docs/version-specific/supported-software/m/molmod.md index 641ebd813..8cd8dd504 100644 --- a/docs/version-specific/supported-software/m/molmod.md +++ b/docs/version-specific/supported-software/m/molmod.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # molmod MolMod is a Python library with many compoments that are useful to write molecular modeling programs. @@ -23,3 +27,6 @@ version | versionsuffix | toolchain ``1.4.8`` | | ``foss/2021a`` ``1.4.8`` | | ``foss/2021b`` ``1.4.8`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mongolite.md b/docs/version-specific/supported-software/m/mongolite.md index ddd36b542..b0a589881 100644 --- a/docs/version-specific/supported-software/m/mongolite.md +++ b/docs/version-specific/supported-software/m/mongolite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mongolite High-performance MongoDB client based on 'mongo-c-driver' and 'jsonlite'. Includes support for aggregation, indexing, map-reduce, streaming, encryption, enterprise authentication, and GridFS. The online user manual provides an overview of the available methods in the package: . @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.3.0`` | ``-R-4.0.0`` | ``foss/2020a`` ``2.3.0`` | ``-R-4.0.3`` | ``foss/2020b`` ``2.3.0`` | ``-R-4.0.4`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/moonjit.md b/docs/version-specific/supported-software/m/moonjit.md index 442c72be6..33421a7e6 100644 --- a/docs/version-specific/supported-software/m/moonjit.md +++ b/docs/version-specific/supported-software/m/moonjit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # moonjit Moonjit is a Just-In-Time Compiler (JIT) for the Lua programming language. Lua is a powerful, dynamic and light-weight programming language. It may be embedded or used as a general-purpose, stand-alone language. @@ -7,3 +11,6 @@ Moonjit is a Just-In-Time Compiler (JIT) for the Lua programming language. Lua version | toolchain --------|---------- ``2.2.0`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mordecai.md b/docs/version-specific/supported-software/m/mordecai.md index b586e8106..4be06a0ab 100644 --- a/docs/version-specific/supported-software/m/mordecai.md +++ b/docs/version-specific/supported-software/m/mordecai.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mordecai mordecai is a full text geoparsing as a Python library. Extract the place names from a piece of text, resolve them to the correct place, and return their coordinates and structured geographic information. @@ -7,3 +11,6 @@ mordecai is a full text geoparsing as a Python library. Extract the place names version | versionsuffix | toolchain --------|---------------|---------- ``2.0.1`` | ``-Python-3.6.4`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/morphosamplers.md b/docs/version-specific/supported-software/m/morphosamplers.md index f74e66e4c..8b6669569 100644 --- a/docs/version-specific/supported-software/m/morphosamplers.md +++ b/docs/version-specific/supported-software/m/morphosamplers.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # morphosamplers A library for sampling image data along morphological objects such as splines and surfaces. @@ -7,3 +11,6 @@ A library for sampling image data along morphological objects such as splines an version | toolchain --------|---------- ``0.0.10`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mosdepth.md b/docs/version-specific/supported-software/m/mosdepth.md index 181edcf39..ad02801b7 100644 --- a/docs/version-specific/supported-software/m/mosdepth.md +++ b/docs/version-specific/supported-software/m/mosdepth.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mosdepth Fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing @@ -10,3 +14,6 @@ version | toolchain ``0.2.3`` | ``intel/2018a`` ``0.2.4`` | ``foss/2018b`` ``0.3.3`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/motif.md b/docs/version-specific/supported-software/m/motif.md index 08a8a0eba..c69641082 100644 --- a/docs/version-specific/supported-software/m/motif.md +++ b/docs/version-specific/supported-software/m/motif.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # motif Motif refers to both a graphical user interface (GUI) specification and the widget toolkit for building applications that follow that specification under the X Window System on Unix and other POSIX-compliant systems. It was the standard toolkit for the Common Desktop Environment and thus for Unix. @@ -24,3 +28,6 @@ version | toolchain ``2.3.8`` | ``intel/2017b`` ``2.3.8`` | ``intel/2018a`` ``2.3.8`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/motionSegmentation.md b/docs/version-specific/supported-software/m/motionSegmentation.md index 4f662ddb3..82927f824 100644 --- a/docs/version-specific/supported-software/m/motionSegmentation.md +++ b/docs/version-specific/supported-software/m/motionSegmentation.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # motionSegmentation Motion correction, explicit spatio-temporal regularization of motion tracking, random speckles enhancement, and segmentation. @@ -7,3 +11,6 @@ Motion correction, explicit spatio-temporal regularization of motion tracking, r version | versionsuffix | toolchain --------|---------------|---------- ``2.7.9`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mpath.md b/docs/version-specific/supported-software/m/mpath.md index 1e0d21a57..460b8c651 100644 --- a/docs/version-specific/supported-software/m/mpath.md +++ b/docs/version-specific/supported-software/m/mpath.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mpath For now it's quit simple and get_path_info() method returns information about given path. It can be either a directory or a file path. @@ -7,3 +11,6 @@ For now it's quit simple and get_path_info() method returns information about gi version | toolchain --------|---------- ``1.1.3`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mpi4py.md b/docs/version-specific/supported-software/m/mpi4py.md index d135c1676..71430f1f3 100644 --- a/docs/version-specific/supported-software/m/mpi4py.md +++ b/docs/version-specific/supported-software/m/mpi4py.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mpi4py MPI for Python (mpi4py) provides bindings of the Message Passing Interface (MPI) standard for the Python programming language, allowing any Python program to exploit multiple processors. @@ -18,3 +22,6 @@ version | versionsuffix | toolchain ``3.1.4`` | | ``gompi/2022b`` ``3.1.4`` | | ``gompi/2023a`` ``3.1.5`` | | ``gompi/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mpiP.md b/docs/version-specific/supported-software/m/mpiP.md index 51207ca69..cdd80a953 100644 --- a/docs/version-specific/supported-software/m/mpiP.md +++ b/docs/version-specific/supported-software/m/mpiP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mpiP mpiP is a lightweight profiling library for MPI applications. Because it only collects statistical information about MPI functions, mpiP generates considerably less overhead and much less data than tracing tools. All the information captured by mpiP is task-local. It only uses communication during report generation, typically at the end of the experiment, to merge results from all of the tasks into one output file. @@ -9,3 +13,6 @@ version | toolchain ``3.4.1`` | ``gompi/2019a`` ``3.4.1`` | ``iimpi/2019a`` ``3.4.1`` | ``iompi/2019.01`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mpifileutils.md b/docs/version-specific/supported-software/m/mpifileutils.md index 74708ce84..d2bdc5a46 100644 --- a/docs/version-specific/supported-software/m/mpifileutils.md +++ b/docs/version-specific/supported-software/m/mpifileutils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mpifileutils MPI-Based File Utilities For Distributed Systems @@ -13,3 +17,6 @@ version | toolchain ``0.11.1`` | ``gompi/2023a`` ``0.9.1`` | ``gompi/2019a`` ``0.9.1`` | ``iimpi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mpmath.md b/docs/version-specific/supported-software/m/mpmath.md index 058022dac..e4eef930c 100644 --- a/docs/version-specific/supported-software/m/mpmath.md +++ b/docs/version-specific/supported-software/m/mpmath.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mpmath mpmath can be used as an arbitrary-precision substitute for Python's float/complex types and math/cmath modules, but also does much more advanced mathematics. Almost any calculation can be performed just as well at 10-digit or 1000-digit precision, with either real or complex numbers, and in many cases mpmath implements efficient algorithms that scale well for extremely high precision work. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``1.2.1`` | | ``GCCcore/11.2.0`` ``1.2.1`` | | ``GCCcore/11.3.0`` ``1.3.0`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mrcfile.md b/docs/version-specific/supported-software/m/mrcfile.md index 150b0f01b..a9ec6b963 100644 --- a/docs/version-specific/supported-software/m/mrcfile.md +++ b/docs/version-specific/supported-software/m/mrcfile.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mrcfile mrcfile is a Python implementation of the MRC2014 file format, which is used in structural biology to store image and volume data. It allows MRC files to be created and opened easily using a very simple API, which exposes the file’s header and data as numpy arrays. The code runs in Python 2 and 3 and is fully unit-tested. This library aims to allow users and developers to read and write standard- compliant MRC files in Python as easily as possible, and with no dependencies on any compiled libraries except numpy. You can use it interactively to inspect files, correct headers and so on, or in scripts and larger software packages to provide basic MRC file I/O functions. @@ -11,3 +15,6 @@ version | toolchain ``1.3.0`` | ``fosscuda/2020b`` ``1.4.3`` | ``foss/2022a`` ``1.5.0`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/msgpack-c.md b/docs/version-specific/supported-software/m/msgpack-c.md index 176819d8a..c00d6239a 100644 --- a/docs/version-specific/supported-software/m/msgpack-c.md +++ b/docs/version-specific/supported-software/m/msgpack-c.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # msgpack-c MessagePack is an efficient binary serialization format, which lets you exchange data among multiple languages like JSON, except that it's faster and smaller. Small integers are encoded into a single byte while typical short strings require only one extra byte in addition to the strings themselves. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.3.0`` | ``GCCcore/10.2.0`` ``6.0.0`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/msprime.md b/docs/version-specific/supported-software/m/msprime.md index 13bbda7c9..8a06069a5 100644 --- a/docs/version-specific/supported-software/m/msprime.md +++ b/docs/version-specific/supported-software/m/msprime.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # msprime msprime is a coalescent simulator and library for processing tree-based genetic data. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.7.0`` | ``-Python-3.7.2`` | ``intel/2019a`` ``1.2.0`` | | ``foss/2021b`` ``1.2.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mstore.md b/docs/version-specific/supported-software/m/mstore.md index 4758067dd..6253300d4 100644 --- a/docs/version-specific/supported-software/m/mstore.md +++ b/docs/version-specific/supported-software/m/mstore.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mstore Molecular structure store for testing @@ -11,3 +15,6 @@ version | toolchain ``0.2.0`` | ``GCC/12.2.0`` ``0.2.0`` | ``intel-compilers/2022.1.0`` ``0.2.0`` | ``intel-compilers/2022.2.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/muMerge.md b/docs/version-specific/supported-software/m/muMerge.md index 8ec00804e..676e9070d 100644 --- a/docs/version-specific/supported-software/m/muMerge.md +++ b/docs/version-specific/supported-software/m/muMerge.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # muMerge muMerge is a tool for combining bed regions from multiple bed files that overlap. @@ -7,3 +11,6 @@ muMerge is a tool for combining bed regions from multiple bed files that overlap version | toolchain --------|---------- ``1.1.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/muParser.md b/docs/version-specific/supported-software/m/muParser.md index 172524181..05c2cc869 100644 --- a/docs/version-specific/supported-software/m/muParser.md +++ b/docs/version-specific/supported-software/m/muParser.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # muParser muParser is an extensible high performance math expression parser library written in C++. It works by transforming a mathematical expression into bytecode and precalculating constant parts of the expression. @@ -12,3 +16,6 @@ version | toolchain ``2.3.3`` | ``GCCcore/10.3.0`` ``2.3.4`` | ``GCCcore/11.3.0`` ``2.3.4`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mujoco-py.md b/docs/version-specific/supported-software/m/mujoco-py.md index bdc1b2679..a277ec43e 100644 --- a/docs/version-specific/supported-software/m/mujoco-py.md +++ b/docs/version-specific/supported-software/m/mujoco-py.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mujoco-py MuJoCo is a physics engine for detailed, efficient rigid body simulations with contacts. mujoco-py allows using MuJoCo from Python 3. @@ -7,3 +11,6 @@ MuJoCo is a physics engine for detailed, efficient rigid body simulations with c version | toolchain --------|---------- ``2.1.2.14`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/multicharge.md b/docs/version-specific/supported-software/m/multicharge.md index 21ea74c12..27e76640d 100644 --- a/docs/version-specific/supported-software/m/multicharge.md +++ b/docs/version-specific/supported-software/m/multicharge.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # multicharge Electronegativity equilibration model for atomic partial charges. @@ -9,3 +13,6 @@ version | toolchain ``0.2.0`` | ``gfbf/2022b`` ``0.2.0`` | ``iimkl/2022a`` ``0.2.0`` | ``iimkl/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/multichoose.md b/docs/version-specific/supported-software/m/multichoose.md index 77ab5e323..a286f63dd 100644 --- a/docs/version-specific/supported-software/m/multichoose.md +++ b/docs/version-specific/supported-software/m/multichoose.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # multichoose generate multiset combinations (n multichoose k). @@ -12,3 +16,6 @@ version | toolchain ``1.0.3`` | ``GCCcore/11.3.0`` ``1.0.3`` | ``GCCcore/12.3.0`` ``1.0.3`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/multiprocess.md b/docs/version-specific/supported-software/m/multiprocess.md index 43cf686ea..a216f3512 100644 --- a/docs/version-specific/supported-software/m/multiprocess.md +++ b/docs/version-specific/supported-software/m/multiprocess.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # multiprocess better multiprocessing and multithreading in python @@ -7,3 +11,6 @@ better multiprocessing and multithreading in python version | toolchain --------|---------- ``0.70.15`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mumott.md b/docs/version-specific/supported-software/m/mumott.md index b80df2940..c84077aa6 100644 --- a/docs/version-specific/supported-software/m/mumott.md +++ b/docs/version-specific/supported-software/m/mumott.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mumott mumott is a Python library for the analysis of multi-modal tensor tomography data. @@ -7,3 +11,6 @@ mumott is a Python library for the analysis of multi-modal tensor tomography dat version | toolchain --------|---------- ``2.1`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/muparserx.md b/docs/version-specific/supported-software/m/muparserx.md index e7feda39d..66a197aaa 100644 --- a/docs/version-specific/supported-software/m/muparserx.md +++ b/docs/version-specific/supported-software/m/muparserx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # muparserx A C++ Library for Parsing Expressions with Strings, Complex Numbers, Vectors, Matrices and more. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``4.0.8`` | ``GCCcore/10.3.0`` ``4.0.8`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mutil.md b/docs/version-specific/supported-software/m/mutil.md index 70763b70a..db2c42ad6 100644 --- a/docs/version-specific/supported-software/m/mutil.md +++ b/docs/version-specific/supported-software/m/mutil.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mutil Mutil is a set of standard utilities that have been parallelized to maximize performance on modern file systems. These currently include multi-threaded drop-in replacements for cp and md5sum from GNU coreutils, which have achieved 10/30x rates on one/many nodes. @@ -7,3 +11,6 @@ Mutil is a set of standard utilities that have been parallelized to maximize per version | toolchain --------|---------- ``1.822.3`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mxml.md b/docs/version-specific/supported-software/m/mxml.md index 6c479edf1..f8df37cc9 100644 --- a/docs/version-specific/supported-software/m/mxml.md +++ b/docs/version-specific/supported-software/m/mxml.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mxml Mini-XML is a tiny XML library that you can use to read and write XML and XML-like data files in your application without requiring large non-standard libraries. @@ -7,3 +11,6 @@ Mini-XML is a tiny XML library that you can use to read and write XML and XML-l version | toolchain --------|---------- ``3.2`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mxmlplus.md b/docs/version-specific/supported-software/m/mxmlplus.md index 98dfe4353..a6b2673a2 100644 --- a/docs/version-specific/supported-software/m/mxmlplus.md +++ b/docs/version-specific/supported-software/m/mxmlplus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mxmlplus Mxml is a pure C library (yet having an object oriented layout) that is meant to help developers implementing XML file interpretation in their projects. @@ -7,3 +11,6 @@ Mxml is a pure C library (yet having an object oriented layout) that is meant to version | toolchain --------|---------- ``0.9.2`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mygene.md b/docs/version-specific/supported-software/m/mygene.md index 8d7fdef45..be6fbacfa 100644 --- a/docs/version-specific/supported-software/m/mygene.md +++ b/docs/version-specific/supported-software/m/mygene.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mygene Python Client for MyGene.Info services. @@ -9,3 +13,6 @@ version | toolchain ``3.1.0`` | ``intel/2019a`` ``3.2.2`` | ``foss/2022a`` ``3.2.2`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mympingpong.md b/docs/version-specific/supported-software/m/mympingpong.md index f6ee83acb..e2f427952 100644 --- a/docs/version-specific/supported-software/m/mympingpong.md +++ b/docs/version-specific/supported-software/m/mympingpong.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mympingpong A mpi4py based random pair pingpong network stress test. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``0.8.0`` | ``-Python-2.7.13`` | ``intel/2017a`` ``0.8.0`` | ``-Python-2.7.14`` | ``intel/2018a`` ``0.8.0`` | ``-Python-2.7.15`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mypy.md b/docs/version-specific/supported-software/m/mypy.md index 254139778..1d1e56d0d 100644 --- a/docs/version-specific/supported-software/m/mypy.md +++ b/docs/version-specific/supported-software/m/mypy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mypy Optional static typing for Python @@ -7,3 +11,6 @@ Optional static typing for Python version | toolchain --------|---------- ``0.4.5`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/m/mysqlclient.md b/docs/version-specific/supported-software/m/mysqlclient.md index bd878a5e2..f1dfb78d2 100644 --- a/docs/version-specific/supported-software/m/mysqlclient.md +++ b/docs/version-specific/supported-software/m/mysqlclient.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # mysqlclient Python interface to MySQL @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.3.7`` | ``-Python-2.7.11`` | ``foss/2016a`` ``1.3.7`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NAG.md b/docs/version-specific/supported-software/n/NAG.md index f8163ada5..fce419709 100644 --- a/docs/version-specific/supported-software/n/NAG.md +++ b/docs/version-specific/supported-software/n/NAG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NAG The worlds largest collection of robust, documented, tested and maintained numerical algorithms. @@ -10,3 +14,6 @@ version | toolchain ``26`` | ``GCCcore/6.4.0`` ``26`` | ``intel/2018a`` ``7.1`` | ``gompi/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NAGfor.md b/docs/version-specific/supported-software/n/NAGfor.md index fd78911cf..742367f4d 100644 --- a/docs/version-specific/supported-software/n/NAGfor.md +++ b/docs/version-specific/supported-software/n/NAGfor.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NAGfor The checking compiler for improved code portability and detailed error reporting. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``6.2.14`` | ``system`` ``7.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NAMD.md b/docs/version-specific/supported-software/n/NAMD.md index 9d2d23d96..22dcbd307 100644 --- a/docs/version-specific/supported-software/n/NAMD.md +++ b/docs/version-specific/supported-software/n/NAMD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NAMD NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. @@ -26,3 +30,6 @@ version | versionsuffix | toolchain ``2.14`` | | ``fosscuda/2019b`` ``2.14`` | | ``fosscuda/2020b`` ``2.14`` | ``-mpi`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NASM.md b/docs/version-specific/supported-software/n/NASM.md index 18d0d88bc..d19d4e6bc 100644 --- a/docs/version-specific/supported-software/n/NASM.md +++ b/docs/version-specific/supported-software/n/NASM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NASM NASM: General-purpose x86 assembler @@ -33,3 +37,6 @@ version | toolchain ``2.16.01`` | ``GCCcore/12.3.0`` ``2.16.01`` | ``GCCcore/13.2.0`` ``2.16.03`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NBO.md b/docs/version-specific/supported-software/n/NBO.md index 115fd1c88..8a442e288 100644 --- a/docs/version-specific/supported-software/n/NBO.md +++ b/docs/version-specific/supported-software/n/NBO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NBO Generalized Natural Bond Orbital algorithm to handle systems characterized by periodic symmetry. @@ -14,3 +18,6 @@ version | toolchain ``7.0.10`` | ``GCC/9.3.0`` ``7.0.10`` | ``gfbf/2022a`` ``7.0.10`` | ``gfbf/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NCBI-Toolkit.md b/docs/version-specific/supported-software/n/NCBI-Toolkit.md index d279354a1..71a6115e5 100644 --- a/docs/version-specific/supported-software/n/NCBI-Toolkit.md +++ b/docs/version-specific/supported-software/n/NCBI-Toolkit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NCBI-Toolkit The NCBI Toolkit is a collection of utilities developed for the production and distribution of GenBank, Entrez, BLAST, and related services by the National Center for Biotechnology Information. @@ -7,3 +11,6 @@ The NCBI Toolkit is a collection of utilities developed for the production and version | toolchain --------|---------- ``18.0.0`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NCCL-tests.md b/docs/version-specific/supported-software/n/NCCL-tests.md index 0b66ac39b..59720cc58 100644 --- a/docs/version-specific/supported-software/n/NCCL-tests.md +++ b/docs/version-specific/supported-software/n/NCCL-tests.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NCCL-tests Tests check both the performance and the correctness of NCCL operations. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.0.0`` | | ``gompic/2019b`` ``2.13.6`` | ``-CUDA-11.7.0`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NCCL.md b/docs/version-specific/supported-software/n/NCCL.md index a15a1bd00..39b106a30 100644 --- a/docs/version-specific/supported-software/n/NCCL.md +++ b/docs/version-specific/supported-software/n/NCCL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NCCL The NVIDIA Collective Communications Library (NCCL) implements multi-GPU and multi-node collective communication primitives that are performance optimized for NVIDIA GPUs. @@ -25,3 +29,6 @@ version | versionsuffix | toolchain ``2.8.3`` | ``-CUDA-11.1.1`` | ``GCCcore/10.2.0`` ``2.8.3`` | ``-CUDA-11.0.2`` | ``GCCcore/9.3.0`` ``2.9.9`` | ``-CUDA-11.3.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NCIPLOT.md b/docs/version-specific/supported-software/n/NCIPLOT.md index 69432d818..316d8fe7d 100644 --- a/docs/version-specific/supported-software/n/NCIPLOT.md +++ b/docs/version-specific/supported-software/n/NCIPLOT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NCIPLOT NCIPLOT is a program for revealing non covalent interactions based on the reduced density gradient. @@ -9,3 +13,6 @@ version | toolchain ``4.0-20190718`` | ``iccifort/2019.5.281`` ``4.0-20200106`` | ``iccifort/2019.5.281`` ``4.0-20200624`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NCL.md b/docs/version-specific/supported-software/n/NCL.md index 4d3640fe2..90369f965 100644 --- a/docs/version-specific/supported-software/n/NCL.md +++ b/docs/version-specific/supported-software/n/NCL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NCL NCL is an interpreted language designed specifically for scientific data analysis and visualization. @@ -17,3 +21,6 @@ version | toolchain ``6.6.2`` | ``intel/2018b`` ``6.6.2`` | ``intel/2019b`` ``6.6.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NCO.md b/docs/version-specific/supported-software/n/NCO.md index 5cbb74da2..e23e1bf90 100644 --- a/docs/version-specific/supported-software/n/NCO.md +++ b/docs/version-specific/supported-software/n/NCO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NCO manipulates and analyzes data stored in netCDF-accessible formats, including DAP, HDF4, and HDF5 @@ -26,3 +30,6 @@ version | toolchain ``5.1.3`` | ``foss/2021a`` ``5.1.3`` | ``foss/2022a`` ``5.1.9`` | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NECI.md b/docs/version-specific/supported-software/n/NECI.md index 64c067b60..804ec478b 100644 --- a/docs/version-specific/supported-software/n/NECI.md +++ b/docs/version-specific/supported-software/n/NECI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NECI Standalone NECI codebase designed for FCIQMC and other stochastic quantum chemistry methods. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20220711`` | ``foss/2022a`` ``20230620`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NEURON.md b/docs/version-specific/supported-software/n/NEURON.md index 0eabc2576..4f442927e 100644 --- a/docs/version-specific/supported-software/n/NEURON.md +++ b/docs/version-specific/supported-software/n/NEURON.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NEURON Empirically-based simulations of neurons and networks of neurons. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``7.4`` | | ``intel/2016b`` ``7.6.5`` | ``-Python-2.7.15`` | ``intel/2018b`` ``7.8.2`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NEXUS-CL.md b/docs/version-specific/supported-software/n/NEXUS-CL.md index 973b70274..894462f18 100644 --- a/docs/version-specific/supported-software/n/NEXUS-CL.md +++ b/docs/version-specific/supported-software/n/NEXUS-CL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NEXUS-CL The NEXUS Class Library is a C++ library for parsing NEXUS files. @@ -7,3 +11,6 @@ The NEXUS Class Library is a C++ library for parsing NEXUS files. version | toolchain --------|---------- ``2.1.18`` | ``GCC/8.2.0-2.31.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NEdit.md b/docs/version-specific/supported-software/n/NEdit.md index 43dff1272..15ec63d85 100644 --- a/docs/version-specific/supported-software/n/NEdit.md +++ b/docs/version-specific/supported-software/n/NEdit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NEdit NEdit is a multi-purpose text editor for the X Window System, which combines a standard, easy to use, graphical user interface with the thorough functionality and stability required by users who edit text eight hours a day. @@ -7,3 +11,6 @@ NEdit is a multi-purpose text editor for the X Window System, which combines a version | versionsuffix | toolchain --------|---------------|---------- ``5.5`` | ``-Linux-x86`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NFFT.md b/docs/version-specific/supported-software/n/NFFT.md index 156941eac..971053f9f 100644 --- a/docs/version-specific/supported-software/n/NFFT.md +++ b/docs/version-specific/supported-software/n/NFFT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NFFT The NFFT (nonequispaced fast Fourier transform or nonuniform fast Fourier transform) is a C subroutine library for computing the nonequispaced discrete Fourier transform (NDFT) and its generalisations in one or more dimensions, of arbitrary input size, and of complex data. @@ -15,3 +19,6 @@ version | toolchain ``3.5.2`` | ``foss/2021b`` ``3.5.3`` | ``foss/2022a`` ``3.5.3`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NGLess.md b/docs/version-specific/supported-software/n/NGLess.md index 5fd5844d5..ac202f18b 100644 --- a/docs/version-specific/supported-software/n/NGLess.md +++ b/docs/version-specific/supported-software/n/NGLess.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NGLess NGLess is a domain-specific language for NGS (next-generation sequencing data) processing. @@ -7,3 +11,6 @@ NGLess is a domain-specific language for NGS (next-generation sequencing data) p version | versionsuffix | toolchain --------|---------------|---------- ``1.1.1`` | ``-static-Linux64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NGS-Python.md b/docs/version-specific/supported-software/n/NGS-Python.md index 1e72509ed..8e2429eb2 100644 --- a/docs/version-specific/supported-software/n/NGS-Python.md +++ b/docs/version-specific/supported-software/n/NGS-Python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NGS-Python NGS is a new, domain-specific API for accessing reads, alignments and pileups produced from Next Generation Sequencing. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.2.3`` | ``-Python-2.7.11`` | ``intel/2016a`` ``2.10.4`` | ``-Python-2.7.16`` | ``gompi/2019b`` ``2.9.3`` | ``-Python-3.6.6`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NGS.md b/docs/version-specific/supported-software/n/NGS.md index 31998e952..e8b55cd66 100644 --- a/docs/version-specific/supported-software/n/NGS.md +++ b/docs/version-specific/supported-software/n/NGS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NGS NGS is a new, domain-specific API for accessing reads, alignments and pileups produced from Next Generation Sequencing. @@ -21,3 +25,6 @@ version | versionsuffix | toolchain ``2.9.1`` | ``-Java-1.8.0_162`` | ``foss/2018a`` ``2.9.1`` | ``-Java-1.8.0_162`` | ``intel/2018a`` ``2.9.3`` | ``-Java-1.8`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NGSadmix.md b/docs/version-specific/supported-software/n/NGSadmix.md index faf1e56e3..28e69449d 100644 --- a/docs/version-specific/supported-software/n/NGSadmix.md +++ b/docs/version-specific/supported-software/n/NGSadmix.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NGSadmix NGSadmix is a tool for finding admixture proportions from NGS data, based on genotype likelihoods. @@ -7,3 +11,6 @@ NGSadmix is a tool for finding admixture proportions from NGS data, based on ge version | toolchain --------|---------- ``32`` | ``GCC/7.3.0-2.30`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NGSpeciesID.md b/docs/version-specific/supported-software/n/NGSpeciesID.md index 87998626f..e8208684d 100644 --- a/docs/version-specific/supported-software/n/NGSpeciesID.md +++ b/docs/version-specific/supported-software/n/NGSpeciesID.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NGSpeciesID NGSpeciesID is a tool for clustering and consensus forming of targeted ONT reads. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.1.2.1`` | | ``foss/2021b`` ``0.3.0`` | | ``foss/2022b`` ``0.3.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NIMBLE.md b/docs/version-specific/supported-software/n/NIMBLE.md index 4d9e20c8a..ff4ae22dc 100644 --- a/docs/version-specific/supported-software/n/NIMBLE.md +++ b/docs/version-specific/supported-software/n/NIMBLE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NIMBLE NIMBLE is a system for building and sharing analysis methods for statistical models, especially for hierarchical models and computationally-intensive methods. @@ -7,3 +11,6 @@ NIMBLE is a system for building and sharing analysis methods for statistical mod version | versionsuffix | toolchain --------|---------------|---------- ``0.7.0`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NIfTI.md b/docs/version-specific/supported-software/n/NIfTI.md index 63f633f8b..9cb7ec8d1 100644 --- a/docs/version-specific/supported-software/n/NIfTI.md +++ b/docs/version-specific/supported-software/n/NIfTI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NIfTI Niftilib is a set of i/o libraries for reading and writing files in the nifti-1 data format. @@ -7,3 +11,6 @@ Niftilib is a set of i/o libraries for reading and writing files in the nifti-1 version | toolchain --------|---------- ``2.0.0`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NLMpy.md b/docs/version-specific/supported-software/n/NLMpy.md index a8c85e234..b80e40eec 100644 --- a/docs/version-specific/supported-software/n/NLMpy.md +++ b/docs/version-specific/supported-software/n/NLMpy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NLMpy NLMpy is a Python package for the creation of neutral landscape models that are widely used in the modelling of ecological patterns and processes across landscapes. @@ -7,3 +11,6 @@ NLMpy is a Python package for the creation of neutral landscape models that are version | versionsuffix | toolchain --------|---------------|---------- ``0.1.5`` | ``-Python-3.7.4`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NLTK.md b/docs/version-specific/supported-software/n/NLTK.md index e29eccd11..7566449c9 100644 --- a/docs/version-specific/supported-software/n/NLTK.md +++ b/docs/version-specific/supported-software/n/NLTK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NLTK NLTK is a leading platform for building Python programs to work with human language data. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``3.8.1`` | | ``foss/2022b`` ``3.8.1`` | | ``foss/2023a`` ``3.8.1`` | | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NLopt.md b/docs/version-specific/supported-software/n/NLopt.md index a6bd49b38..5f2a7a26a 100644 --- a/docs/version-specific/supported-software/n/NLopt.md +++ b/docs/version-specific/supported-software/n/NLopt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NLopt NLopt is a free/open-source library for nonlinear optimization, providing a common interface for a number of different free optimization routines available online as well as original implementations of various other algorithms. @@ -28,3 +32,6 @@ version | toolchain ``2.7.1`` | ``GCCcore/11.3.0`` ``2.7.1`` | ``GCCcore/12.2.0`` ``2.7.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NOVOPlasty.md b/docs/version-specific/supported-software/n/NOVOPlasty.md index e20e1b45b..403db2a17 100644 --- a/docs/version-specific/supported-software/n/NOVOPlasty.md +++ b/docs/version-specific/supported-software/n/NOVOPlasty.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NOVOPlasty NOVOPlasty is a de novo assembler and heteroplasmy/variance caller for short circular genomes. @@ -7,3 +11,6 @@ NOVOPlasty is a de novo assembler and heteroplasmy/variance caller for short cir version | toolchain --------|---------- ``3.7`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NRGLjubljana.md b/docs/version-specific/supported-software/n/NRGLjubljana.md index df5ef2bb3..55bd192b5 100644 --- a/docs/version-specific/supported-software/n/NRGLjubljana.md +++ b/docs/version-specific/supported-software/n/NRGLjubljana.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NRGLjubljana NRG Ljubljana is an efficient implementation of the numerical renormalization group (NRG) technique for solving quantum impurity problems that arise as simplified models of magnetic impurities and as effective models in the dynamical mean field theory (DMFT) approach to bulk correlated materials. @@ -7,3 +11,6 @@ NRG Ljubljana is an efficient implementation of the numerical renormalization gr version | toolchain --------|---------- ``2.4.3.23`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NSPR.md b/docs/version-specific/supported-software/n/NSPR.md index 87478df11..0bca769a5 100644 --- a/docs/version-specific/supported-software/n/NSPR.md +++ b/docs/version-specific/supported-software/n/NSPR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NSPR Netscape Portable Runtime (NSPR) provides a platform-neutral API for system level and libc-like functions. @@ -18,3 +22,6 @@ version | toolchain ``4.35`` | ``GCCcore/12.2.0`` ``4.35`` | ``GCCcore/12.3.0`` ``4.35`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NSS.md b/docs/version-specific/supported-software/n/NSS.md index 74f40cf40..c0c7ae84c 100644 --- a/docs/version-specific/supported-software/n/NSS.md +++ b/docs/version-specific/supported-software/n/NSS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NSS Network Security Services (NSS) is a set of libraries designed to support cross-platform development of security-enabled client and server applications. @@ -18,3 +22,6 @@ version | toolchain ``3.85`` | ``GCCcore/12.2.0`` ``3.89.1`` | ``GCCcore/12.3.0`` ``3.94`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NTL.md b/docs/version-specific/supported-software/n/NTL.md index e40cb4fc1..2ecbf9492 100644 --- a/docs/version-specific/supported-software/n/NTL.md +++ b/docs/version-specific/supported-software/n/NTL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NTL NTL is a high-performance, portable C++ library providing data structures and algorithms for manipulating signed, arbitrary length integers, and for vectors, matrices, and polynomials over the integers and over finite fields. @@ -11,3 +15,6 @@ version | toolchain ``11.5.1`` | ``GCC/11.3.0`` ``11.5.1`` | ``GCC/12.2.0`` ``11.5.1`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NTPoly.md b/docs/version-specific/supported-software/n/NTPoly.md index ad3c29295..bb0b1f098 100644 --- a/docs/version-specific/supported-software/n/NTPoly.md +++ b/docs/version-specific/supported-software/n/NTPoly.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NTPoly is a massively parallel library for computing the functions of sparse, symmetric matrices based on polynomial expansions. For sufficiently sparse matrices, most of the matrix functions in NTPoly can be computed in linear time. @@ -11,3 +15,6 @@ version | toolchain ``2.7.0`` | ``foss/2021a`` ``2.7.0`` | ``intel/2021a`` ``2.7.1`` | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NVHPC.md b/docs/version-specific/supported-software/n/NVHPC.md index 34ff16c42..be55b3e5a 100644 --- a/docs/version-specific/supported-software/n/NVHPC.md +++ b/docs/version-specific/supported-software/n/NVHPC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NVHPC C, C++ and Fortran compilers included with the NVIDIA HPC SDK (previously: PGI) @@ -22,3 +26,6 @@ version | versionsuffix | toolchain ``23.7`` | ``-CUDA-12.1.1`` | ``system`` ``23.7`` | ``-CUDA-12.2.0`` | ``system`` ``24.1`` | ``-CUDA-12.3.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NVSHMEM.md b/docs/version-specific/supported-software/n/NVSHMEM.md index 3b9b6e0c0..a4f549421 100644 --- a/docs/version-specific/supported-software/n/NVSHMEM.md +++ b/docs/version-specific/supported-software/n/NVSHMEM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NVSHMEM NVSHMEM is a parallel programming interface based on OpenSHMEM that provides efficient and scalable communication for NVIDIA GPU clusters. NVSHMEM creates a global address space for data that spans the memory of multiple GPUs and can be accessed with fine-grained GPU-initiated operations, CPU-initiated operations, and operations on CUDA streams. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.5.0`` | ``-CUDA-11.7.0`` | ``gompi/2022a`` ``2.7.0`` | ``-CUDA-11.7.0`` | ``gompi/2022a`` ``2.8.0`` | ``-CUDA-11.7.0`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NWChem.md b/docs/version-specific/supported-software/n/NWChem.md index ee7823af4..d7f3d09ef 100644 --- a/docs/version-specific/supported-software/n/NWChem.md +++ b/docs/version-specific/supported-software/n/NWChem.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NWChem NWChem aims to provide its users with computational chemistry tools that are scalable both in their ability to treat large scientific computational chemistry problems efficiently, and in their use of available parallel computing resources from high-performance parallel supercomputers to conventional workstation clusters. NWChem software can handle: biomolecules, nanostructures, and solid-state; from quantum to classical, and all combinations; Gaussian basis functions or plane-waves; scaling from one to thousands of processors; properties and relativity. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``7.0.2`` | | ``intel/2021a`` ``7.0.2`` | | ``intel/2022a`` ``7.2.2`` | | ``intel/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NanoCaller.md b/docs/version-specific/supported-software/n/NanoCaller.md index 47ca2d42f..66b056ac6 100644 --- a/docs/version-specific/supported-software/n/NanoCaller.md +++ b/docs/version-specific/supported-software/n/NanoCaller.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NanoCaller NanoCaller is a computational method that integrates long reads in deep convolutional neural network for the detection of SNPs/indels from long-read sequencing data. @@ -7,3 +11,6 @@ NanoCaller is a computational method that integrates long reads in deep convolu version | toolchain --------|---------- ``3.4.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NanoComp.md b/docs/version-specific/supported-software/n/NanoComp.md index ef9a4e832..f43c34eef 100644 --- a/docs/version-specific/supported-software/n/NanoComp.md +++ b/docs/version-specific/supported-software/n/NanoComp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NanoComp Comparing runs of Oxford Nanopore sequencing data and alignments @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.10.1`` | ``-Python-3.7.4`` | ``intel/2019b`` ``1.13.1`` | | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NanoFilt.md b/docs/version-specific/supported-software/n/NanoFilt.md index b7d5e5a1d..fe5449db9 100644 --- a/docs/version-specific/supported-software/n/NanoFilt.md +++ b/docs/version-specific/supported-software/n/NanoFilt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NanoFilt Filtering and trimming of long read sequencing data. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``2.6.0`` | ``-Python-3.7.4`` | ``intel/2019b`` ``2.6.0`` | ``-Python-3.8.2`` | ``intel/2020a`` ``2.8.0`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NanoLyse.md b/docs/version-specific/supported-software/n/NanoLyse.md index f1d8d72a0..6bfb51695 100644 --- a/docs/version-specific/supported-software/n/NanoLyse.md +++ b/docs/version-specific/supported-software/n/NanoLyse.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NanoLyse Remove reads mapping to the lambda phage genome from a fastq file. @@ -7,3 +11,6 @@ Remove reads mapping to the lambda phage genome from a fastq file. version | toolchain --------|---------- ``1.2.1`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NanoPlot.md b/docs/version-specific/supported-software/n/NanoPlot.md index 9980e7a69..033e6992b 100644 --- a/docs/version-specific/supported-software/n/NanoPlot.md +++ b/docs/version-specific/supported-software/n/NanoPlot.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NanoPlot Plotting suite for long read sequencing data and alignments @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.33.0`` | | ``foss/2021a`` ``1.33.0`` | | ``intel/2020b`` ``1.42.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NanoStat.md b/docs/version-specific/supported-software/n/NanoStat.md index 264ad918c..07f459ec7 100644 --- a/docs/version-specific/supported-software/n/NanoStat.md +++ b/docs/version-specific/supported-software/n/NanoStat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NanoStat Calculate various statistics from a long read sequencing dataset in fastq, bam or albacore sequencing summary format. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.6.0`` | ``foss/2021a`` ``1.6.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NanopolishComp.md b/docs/version-specific/supported-software/n/NanopolishComp.md index 76e2c938a..91f2a2f27 100644 --- a/docs/version-specific/supported-software/n/NanopolishComp.md +++ b/docs/version-specific/supported-software/n/NanopolishComp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NanopolishComp NanopolishComp is a Python3 package for downstream analyses of Nanopolish output files @@ -7,3 +11,6 @@ NanopolishComp is a Python3 package for downstream analyses of Nanopolish output version | versionsuffix | toolchain --------|---------------|---------- ``0.6.11`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/Nek5000.md b/docs/version-specific/supported-software/n/Nek5000.md index deed0c62b..11d2cc67e 100644 --- a/docs/version-specific/supported-software/n/Nek5000.md +++ b/docs/version-specific/supported-software/n/Nek5000.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Nek5000 a fast and scalable high-order solver for computational fluid dynamics @@ -7,3 +11,6 @@ a fast and scalable high-order solver for computational fluid dynamics version | toolchain --------|---------- ``17.0`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/Nektar++.md b/docs/version-specific/supported-software/n/Nektar++.md index 259a490b3..f46b83b2c 100644 --- a/docs/version-specific/supported-software/n/Nektar++.md +++ b/docs/version-specific/supported-software/n/Nektar++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Nektar++ Nektar++ is a tensor product based finite element package designed to allow one to construct efficient classical low polynomial order h-type solvers (where h is the size of the finite element) as well as higher p-order piecewise polynomial order solvers. @@ -7,3 +11,6 @@ Nektar++ is a tensor product based finite element package designed to allow one version | toolchain --------|---------- ``5.0.1`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/Net-core.md b/docs/version-specific/supported-software/n/Net-core.md index 825b183fc..07b659327 100644 --- a/docs/version-specific/supported-software/n/Net-core.md +++ b/docs/version-specific/supported-software/n/Net-core.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Net-core .NET Core is a free and open-source managed computer software framework for the Windows, Linux, and macOS operating systems .NET Core fully supports C# and F# and partially supports Visual Basic @@ -9,3 +13,6 @@ version | toolchain ``2.1.8`` | ``system`` ``2.2.5`` | ``system`` ``3.0.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NetLogo.md b/docs/version-specific/supported-software/n/NetLogo.md index 6bc6eadff..b8712b20a 100644 --- a/docs/version-specific/supported-software/n/NetLogo.md +++ b/docs/version-specific/supported-software/n/NetLogo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NetLogo NetLogo is a multi-agent programmable modeling environment. It is used by tens of thousands of students, teachers and researchers worldwide. It also powers HubNet participatory simulations. It is authored by Uri Wilensky and developed at the CCL. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``6.2.0`` | ``-64`` | ``system`` ``6.2.2`` | ``-64`` | ``system`` ``6.3.0`` | ``-64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NetPIPE.md b/docs/version-specific/supported-software/n/NetPIPE.md index df663bc77..c327078d9 100644 --- a/docs/version-specific/supported-software/n/NetPIPE.md +++ b/docs/version-specific/supported-software/n/NetPIPE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NetPIPE NetPIPE is a protocol independent communication performance benchmark that visually represents the network performance under a variety of conditions. @@ -9,3 +13,6 @@ version | toolchain ``5.1`` | ``intel/2018a`` ``5.1.4`` | ``gompi/2020b`` ``5.1.4`` | ``iimpi/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NetPyNE.md b/docs/version-specific/supported-software/n/NetPyNE.md index d3aa64054..89ad4b1cb 100644 --- a/docs/version-specific/supported-software/n/NetPyNE.md +++ b/docs/version-specific/supported-software/n/NetPyNE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NetPyNE NetPyNE is an open-source Python package to facilitate the development, parallel simulation, analysis, and optimization of biological neuronal networks using the NEURON simulator. @@ -7,3 +11,6 @@ NetPyNE is an open-source Python package to facilitate the development, parallel version | toolchain --------|---------- ``1.0.2.1`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NeuroKit.md b/docs/version-specific/supported-software/n/NeuroKit.md index 0985d541a..7bf9401c5 100644 --- a/docs/version-specific/supported-software/n/NeuroKit.md +++ b/docs/version-specific/supported-software/n/NeuroKit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NeuroKit NeuroKit is a Python module that provides high-level integrative functions with good and flexible defaults, allowing users to focus on what’s important. @@ -7,3 +11,6 @@ NeuroKit is a Python module that provides high-level integrative functions with version | versionsuffix | toolchain --------|---------------|---------- ``0.2.7`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NewHybrids.md b/docs/version-specific/supported-software/n/NewHybrids.md index a6c706d3a..09105bf82 100644 --- a/docs/version-specific/supported-software/n/NewHybrids.md +++ b/docs/version-specific/supported-software/n/NewHybrids.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NewHybrids This implements a Gibbs sampler to estimate the posterior probability that genetically sampled individuals fall into each of a set of user-defined hybrid categories. @@ -7,3 +11,6 @@ This implements a Gibbs sampler to estimate the posterior probability that genet version | toolchain --------|---------- ``1.1_Beta3`` | ``GCC/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NextGenMap.md b/docs/version-specific/supported-software/n/NextGenMap.md index 2611b90a0..4634bfc0d 100644 --- a/docs/version-specific/supported-software/n/NextGenMap.md +++ b/docs/version-specific/supported-software/n/NextGenMap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NextGenMap NextGenMap is a flexible highly sensitive short read mapping tool that handles much higher mismatch rates than comparable algorithms while still outperforming them in terms of runtime. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.5.5`` | ``GCC/11.2.0`` ``0.5.5`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/Nextflow.md b/docs/version-specific/supported-software/n/Nextflow.md index 89ac0edee..15d8fda0d 100644 --- a/docs/version-specific/supported-software/n/Nextflow.md +++ b/docs/version-specific/supported-software/n/Nextflow.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Nextflow Nextflow is a reactive workflow framework and a programming DSL that eases writing computational pipelines with complex data @@ -23,3 +27,6 @@ version | toolchain ``23.04.2`` | ``system`` ``23.10.0`` | ``system`` ``24.04.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NiBabel.md b/docs/version-specific/supported-software/n/NiBabel.md index be0d63bc1..e53970f43 100644 --- a/docs/version-specific/supported-software/n/NiBabel.md +++ b/docs/version-specific/supported-software/n/NiBabel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NiBabel NiBabel provides read/write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2 and later), GIFTI, NIfTI1, NIfTI2, MINC1, MINC2, MGH and ECAT as well as Philips PAR/REC. We can read and write Freesurfer geometry, and read Freesurfer morphometry and annotation files. There is some very limited support for DICOM. NiBabel is the successor of PyNIfTI. @@ -27,3 +31,6 @@ version | versionsuffix | toolchain ``3.2.2`` | | ``foss/2021b`` ``4.0.2`` | | ``foss/2022a`` ``5.2.0`` | | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/Nilearn.md b/docs/version-specific/supported-software/n/Nilearn.md index bd7b3ed67..ee01cfa53 100644 --- a/docs/version-specific/supported-software/n/Nilearn.md +++ b/docs/version-specific/supported-software/n/Nilearn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Nilearn Nilearn is a Python module for fast and easy statistical learning on NeuroImaging data. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``0.5.2`` | | ``intel/2019a`` ``0.7.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``0.7.1`` | | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/Nim.md b/docs/version-specific/supported-software/n/Nim.md index 4d8eacd14..5aaec9213 100644 --- a/docs/version-specific/supported-software/n/Nim.md +++ b/docs/version-specific/supported-software/n/Nim.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Nim Nim is a systems and applications programming language. @@ -12,3 +16,6 @@ version | toolchain ``1.4.6`` | ``GCCcore/10.2.0`` ``1.4.8`` | ``GCCcore/10.3.0`` ``1.6.6`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/Ninja.md b/docs/version-specific/supported-software/n/Ninja.md index 5f9a36804..1b08fc26d 100644 --- a/docs/version-specific/supported-software/n/Ninja.md +++ b/docs/version-specific/supported-software/n/Ninja.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Ninja Ninja is a small build system with a focus on speed. @@ -23,3 +27,6 @@ version | toolchain ``1.9.0`` | ``GCCcore/8.2.0`` ``1.9.0`` | ``GCCcore/8.3.0`` ``1.9.0`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/Nipype.md b/docs/version-specific/supported-software/n/Nipype.md index 2e0c04195..21a1c6de0 100644 --- a/docs/version-specific/supported-software/n/Nipype.md +++ b/docs/version-specific/supported-software/n/Nipype.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Nipype Nipype is a Python project that provides a uniform interface to existing neuroimaging software and facilitates interaction between these packages within a single workflow. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``1.4.2`` | ``-Python-3.7.4`` | ``intel/2019b`` ``1.6.0`` | | ``foss/2020b`` ``1.8.5`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/Node-RED.md b/docs/version-specific/supported-software/n/Node-RED.md index e1c8e66e5..122b84742 100644 --- a/docs/version-specific/supported-software/n/Node-RED.md +++ b/docs/version-specific/supported-software/n/Node-RED.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Node-RED Node-RED is a programming tool for wiring together hardware devices, APIs and online services in new and interesting ways. @@ -7,3 +11,6 @@ Node-RED is a programming tool for wiring together hardware devices, APIs and on version | toolchain --------|---------- ``0.16.2`` | ``foss/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/Normaliz.md b/docs/version-specific/supported-software/n/Normaliz.md index a171077e2..1da50e454 100644 --- a/docs/version-specific/supported-software/n/Normaliz.md +++ b/docs/version-specific/supported-software/n/Normaliz.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Normaliz Normaliz is a open source tool for computations in affine monoids, vector configurations, rational polyhedra and rational cones. Normaliz now computes rational and algebraic polyhedra, i.e., polyhedra defined over real algebraic extensions of QQ. @@ -10,3 +14,6 @@ version | toolchain ``3.6.3`` | ``intel/2018b`` ``3.7.4`` | ``gompi/2019a`` ``3.8.4`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/Nsight-Compute.md b/docs/version-specific/supported-software/n/Nsight-Compute.md index 8fc8caa8f..80d5162f2 100644 --- a/docs/version-specific/supported-software/n/Nsight-Compute.md +++ b/docs/version-specific/supported-software/n/Nsight-Compute.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Nsight-Compute NVIDIA® Nsight™ Compute is an interactive kernel profiler for CUDA applications. It provides detailed performance metrics and API debugging via a user interface and command line tool. In addition, its baseline feature allows users to compare results within the tool. Nsight Compute provides a customizable and data-driven user interface and metric collection and can be extended with analysis scripts for post-processing results. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2020.3.0`` | ``system`` ``2021.2.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/Nsight-Systems.md b/docs/version-specific/supported-software/n/Nsight-Systems.md index f9a554744..ba6c3d5c6 100644 --- a/docs/version-specific/supported-software/n/Nsight-Systems.md +++ b/docs/version-specific/supported-software/n/Nsight-Systems.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Nsight-Systems NVIDIA® Nsight™ Systems is a system-wide performance analysis tool designed to visualize an application’s algorithm, help you select the largest opportunities to optimize, and tune to scale efficiently across any quantity of CPUs and GPUs in your computer; from laptops to DGX servers. @@ -7,3 +11,6 @@ NVIDIA® Nsight™ Systems is a system-wide performance analysis tool designed t version | toolchain --------|---------- ``2020.5.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/NxTrim.md b/docs/version-specific/supported-software/n/NxTrim.md index c28e4665d..635c82fbd 100644 --- a/docs/version-specific/supported-software/n/NxTrim.md +++ b/docs/version-specific/supported-software/n/NxTrim.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # NxTrim NxTrim is a software to remove Nextera Mate Pair junction adapters and categorise reads according to the orientation implied by the adapter location. @@ -7,3 +11,6 @@ NxTrim is a software to remove Nextera Mate Pair junction adapters and categoris version | toolchain --------|---------- ``0.4.3`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/index.md b/docs/version-specific/supported-software/n/index.md index 314d7f896..5711b8535 100644 --- a/docs/version-specific/supported-software/n/index.md +++ b/docs/version-specific/supported-software/n/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (n) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - *n* - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [n2v](n2v.md) * [NAG](NAG.md) * [NAGfor](NAGfor.md) diff --git a/docs/version-specific/supported-software/n/n2v.md b/docs/version-specific/supported-software/n/n2v.md index 5548f2467..8b128b56d 100644 --- a/docs/version-specific/supported-software/n/n2v.md +++ b/docs/version-specific/supported-software/n/n2v.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # n2v Noise2Void - Learning Denoising from Single Noisy Images The field of image denoising is currently dominated by discriminative deep learning methods that are trained on pairs of noisy input and clean target images. Recently it has been shown that such methods can also be trained without clean targets. Instead, independent pairs of noisy images can be used, in an approach known as NOISE2NOISE (N2N). Here, we introduce NOISE2VOID (N2V), a training scheme that takes this idea one step further. It does not require noisy image pairs, nor clean target images. Consequently, N2V allows us to train directly on the body of data to be denoised and can therefore be applied when other methods cannot. Especially interesting is the application to biomedical image data, where the acquisition of training targets, clean or noisy, is frequently not possible. We compare the performance of N2V to approaches that have either clean target images and/or noisy image pairs available. Intuitively, N2V cannot be expected to outperform methods that have more information available during training. Still, we observe that the denoising performance of NOISE2VOID drops in moderation and compares favorably to training-free denoising methods. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.3.2`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``0.3.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/namedlist.md b/docs/version-specific/supported-software/n/namedlist.md index d290b1928..5ffd0be74 100644 --- a/docs/version-specific/supported-software/n/namedlist.md +++ b/docs/version-specific/supported-software/n/namedlist.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # namedlist A Python object, similar to namedtuple, but for lists. @@ -7,3 +11,6 @@ A Python object, similar to namedtuple, but for lists. version | toolchain --------|---------- ``1.8`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nano.md b/docs/version-specific/supported-software/n/nano.md index 74cdbb85b..cde7332a5 100644 --- a/docs/version-specific/supported-software/n/nano.md +++ b/docs/version-specific/supported-software/n/nano.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nano a simple editor, inspired by Pico @@ -10,3 +14,6 @@ version | toolchain ``7.0`` | ``GCCcore/11.3.0`` ``7.1`` | ``GCCcore/12.2.0`` ``7.2`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nanocompore.md b/docs/version-specific/supported-software/n/nanocompore.md index 192d55205..751176e50 100644 --- a/docs/version-specific/supported-software/n/nanocompore.md +++ b/docs/version-specific/supported-software/n/nanocompore.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nanocompore Nanocompore identifies differences in ONT nanopore sequencing raw signal corresponding to RNA modifications by comparing 2 samples @@ -7,3 +11,6 @@ Nanocompore identifies differences in ONT nanopore sequencing raw signal corresp version | versionsuffix | toolchain --------|---------------|---------- ``1.0.0rc3-2`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nanoflann.md b/docs/version-specific/supported-software/n/nanoflann.md index 18cdb523a..8eb800b4b 100644 --- a/docs/version-specific/supported-software/n/nanoflann.md +++ b/docs/version-specific/supported-software/n/nanoflann.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nanoflann nanoflann is a C++11 header-only library for building KD-Trees of datasets with different topologies. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.4.0`` | ``GCCcore/10.3.0`` ``1.5.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nanoget.md b/docs/version-specific/supported-software/n/nanoget.md index afd6bbc59..bd01491b0 100644 --- a/docs/version-specific/supported-software/n/nanoget.md +++ b/docs/version-specific/supported-software/n/nanoget.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nanoget Functions to extract information from Oxford Nanopore sequencing data and alignments @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``1.18.1`` | | ``foss/2022a`` ``1.18.1`` | | ``foss/2022b`` ``1.19.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nanomath.md b/docs/version-specific/supported-software/n/nanomath.md index 2c4fe3d0e..789e7adc3 100644 --- a/docs/version-specific/supported-software/n/nanomath.md +++ b/docs/version-specific/supported-software/n/nanomath.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nanomath A few simple math function for other Oxford Nanopore processing scripts @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``1.2.1`` | | ``foss/2021a`` ``1.3.0`` | | ``foss/2022a`` ``1.3.0`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nanomax-analysis-utils.md b/docs/version-specific/supported-software/n/nanomax-analysis-utils.md index f53d9b4ca..ae323185f 100644 --- a/docs/version-specific/supported-software/n/nanomax-analysis-utils.md +++ b/docs/version-specific/supported-software/n/nanomax-analysis-utils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nanomax-analysis-utils A set of tools for handling and analysing data at the NanoMAX beamline. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.4.3`` | | ``foss/2020b`` ``0.4.3`` | | ``fosscuda/2020b`` ``0.4.4`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nanonet.md b/docs/version-specific/supported-software/n/nanonet.md index 19f3d4f7c..5b38248c7 100644 --- a/docs/version-specific/supported-software/n/nanonet.md +++ b/docs/version-specific/supported-software/n/nanonet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nanonet Nanonet provides recurrent neural network basecalling for Oxford Nanopore MinION data. @@ -7,3 +11,6 @@ Nanonet provides recurrent neural network basecalling for Oxford Nanopore MinION version | versionsuffix | toolchain --------|---------------|---------- ``2.0.0`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nanopolish.md b/docs/version-specific/supported-software/n/nanopolish.md index 38983dbb6..96119b315 100644 --- a/docs/version-specific/supported-software/n/nanopolish.md +++ b/docs/version-specific/supported-software/n/nanopolish.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nanopolish Software package for signal-level analysis of Oxford Nanopore sequencing data. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``0.13.3`` | | ``foss/2020b`` ``0.14.0`` | | ``foss/2022a`` ``0.9.2`` | | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/napari.md b/docs/version-specific/supported-software/n/napari.md index 2b05ed8ca..300289ccd 100644 --- a/docs/version-specific/supported-software/n/napari.md +++ b/docs/version-specific/supported-software/n/napari.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # napari napari is a fast, interactive, multi-dimensional image viewer for Python. It's designed for browsing, annotating, and analyzing large multi-dimensional images. It's built on top of Qt (for the GUI), vispy (for performant GPU-based rendering), and the scientific Python stack (numpy, scipy). @@ -10,3 +14,6 @@ version | toolchain ``0.4.18`` | ``foss/2022a`` ``0.4.18`` | ``foss/2023a`` ``0.4.19.post1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nauty.md b/docs/version-specific/supported-software/n/nauty.md index ada02d313..4128ac878 100644 --- a/docs/version-specific/supported-software/n/nauty.md +++ b/docs/version-specific/supported-software/n/nauty.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nauty nauty and Traces are programs for computing automorphism groups of graphs and digraphs. They can also produce a canonical label. @@ -11,3 +15,6 @@ version | toolchain ``2.7rc5`` | ``GCC/8.3.0`` ``2.8.6`` | ``GCC/11.3.0`` ``2.8.8`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nbclassic.md b/docs/version-specific/supported-software/n/nbclassic.md index 5bfe0bc0e..3faed3ffe 100644 --- a/docs/version-specific/supported-software/n/nbclassic.md +++ b/docs/version-specific/supported-software/n/nbclassic.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nbclassic NbClassic provides a backwards compatible Jupyter Notebook interface that you can install side-by-side with the latest versions: That way, you can fearlessly upgrade without worrying about your classic extensions and customizations breaking. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.0`` | ``GCCcore/12.3.0`` ``1.0.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/ncbi-vdb.md b/docs/version-specific/supported-software/n/ncbi-vdb.md index 02a17979d..935aa85bc 100644 --- a/docs/version-specific/supported-software/n/ncbi-vdb.md +++ b/docs/version-specific/supported-software/n/ncbi-vdb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ncbi-vdb The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives. @@ -26,3 +30,6 @@ version | toolchain ``3.0.2`` | ``gompi/2022a`` ``3.0.5`` | ``gompi/2021a`` ``3.0.5`` | ``gompi/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/ncdf4.md b/docs/version-specific/supported-software/n/ncdf4.md index e02dcbae4..84d1491c1 100644 --- a/docs/version-specific/supported-software/n/ncdf4.md +++ b/docs/version-specific/supported-software/n/ncdf4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ncdf4 ncdf4: Interface to Unidata netCDF (version 4 or earlier) format data files @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``1.17`` | ``-R-4.0.0`` | ``foss/2020a`` ``1.17`` | ``-R-4.0.3`` | ``foss/2020b`` ``1.17`` | ``-R-4.1.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/ncdu.md b/docs/version-specific/supported-software/n/ncdu.md index 131b61b20..ec6b2bf89 100644 --- a/docs/version-specific/supported-software/n/ncdu.md +++ b/docs/version-specific/supported-software/n/ncdu.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ncdu Ncdu is a disk usage analyzer with an ncurses interface. It is designed to find space hogs on a remote server where you don't have an entire graphical setup available, but it is a useful tool even on regular desktop systems. Ncdu aims to be fast, simple and easy to use, and should be able to run in any minimal POSIX-like environment with ncurses installed. @@ -13,3 +17,6 @@ version | toolchain ``1.16`` | ``GCC/11.2.0`` ``1.17`` | ``GCC/11.3.0`` ``1.18`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/ncolor.md b/docs/version-specific/supported-software/n/ncolor.md index e430b5454..6fb651a81 100644 --- a/docs/version-specific/supported-software/n/ncolor.md +++ b/docs/version-specific/supported-software/n/ncolor.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ncolor Fast remapping of instance labels 1,2,3,...,M to a smaller set of repeating, disjoint labels, 1,2,...,N. @@ -7,3 +11,6 @@ Fast remapping of instance labels 1,2,3,...,M to a smaller set of repeating, dis version | toolchain --------|---------- ``1.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/ncompress.md b/docs/version-specific/supported-software/n/ncompress.md index f8ea2cc72..5856ada3b 100644 --- a/docs/version-specific/supported-software/n/ncompress.md +++ b/docs/version-specific/supported-software/n/ncompress.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ncompress Compress is a fast, simple LZW file compressor. Compress does not have the highest compression rate, but it is one of the fastest programs to compress data. Compress is the defacto standard in the UNIX community for compressing files. @@ -7,3 +11,6 @@ Compress is a fast, simple LZW file compressor. Compress does not have the high version | toolchain --------|---------- ``4.2.4.4`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/ncurses.md b/docs/version-specific/supported-software/n/ncurses.md index 1d5308abe..21d82bc5a 100644 --- a/docs/version-specific/supported-software/n/ncurses.md +++ b/docs/version-specific/supported-software/n/ncurses.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ncurses The Ncurses (new curses) library is a free software emulation of curses in System V Release 4.0, and more. It uses Terminfo format, supports pads and color and multiple highlights and forms characters and function-key mapping, and has all the other SYSV-curses enhancements over BSD Curses. @@ -55,3 +59,6 @@ version | toolchain ``6.4`` | ``system`` ``6.5`` | ``GCCcore/13.3.0`` ``6.5`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/ncview.md b/docs/version-specific/supported-software/n/ncview.md index d97e51e6d..c715d6ff3 100644 --- a/docs/version-specific/supported-software/n/ncview.md +++ b/docs/version-specific/supported-software/n/ncview.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ncview Ncview is a visual browser for netCDF format files. Typically you would use ncview to get a quick and easy, push-button look at your netCDF files. You can view simple movies of the data, view along various dimensions, take a look at the actual data values, change color maps, invert the data, etc. @@ -22,3 +26,6 @@ version | toolchain ``2.1.8`` | ``gompi/2021b`` ``2.1.8`` | ``gompi/2022a`` ``2.1.8`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nd2reader.md b/docs/version-specific/supported-software/n/nd2reader.md index 3b6201720..c9d26d1a5 100644 --- a/docs/version-specific/supported-software/n/nd2reader.md +++ b/docs/version-specific/supported-software/n/nd2reader.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nd2reader nd2reader is a pure-Python package that reads images produced by NIS Elements 4.0+. @@ -7,3 +11,6 @@ nd2reader is a pure-Python package that reads images produced by NIS Elements 4. version | versionsuffix | toolchain --------|---------------|---------- ``3.0.6`` | ``-Python-2.7.14`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/ne.md b/docs/version-specific/supported-software/n/ne.md index 38dc09bf4..8badd96e2 100644 --- a/docs/version-specific/supported-software/n/ne.md +++ b/docs/version-specific/supported-software/n/ne.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ne ne is a free (GPL'd) text editor based on the POSIX standard that runs (we hope) on almost any UN*X machine. ne is easy to use for the beginner, but powerful and fully configurable for the wizard, and most sparing in its resource usage. @@ -7,3 +11,6 @@ ne is a free (GPL'd) text editor based on the POSIX standard that runs (we hope) version | toolchain --------|---------- ``3.0.1`` | ``gimkl/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/neon.md b/docs/version-specific/supported-software/n/neon.md index 4395f058f..e3abce4ac 100644 --- a/docs/version-specific/supported-software/n/neon.md +++ b/docs/version-specific/supported-software/n/neon.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # neon neon is an HTTP/1.1 and WebDAV client library, with a C interface. @@ -7,3 +11,6 @@ neon is an HTTP/1.1 and WebDAV client library, with a C interface. version | toolchain --------|---------- ``0.31.2`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/neptune-client.md b/docs/version-specific/supported-software/n/neptune-client.md index 52129d8d9..97f4c462e 100644 --- a/docs/version-specific/supported-software/n/neptune-client.md +++ b/docs/version-specific/supported-software/n/neptune-client.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # neptune-client Neptune is an experiment tracking hub that brings organization and collaboration to your data science team. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.16.2`` | | ``foss/2021a`` ``0.16.2`` | | ``foss/2022a`` ``0.4.129`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/netCDF-C++.md b/docs/version-specific/supported-software/n/netCDF-C++.md index 85e266902..bd387c109 100644 --- a/docs/version-specific/supported-software/n/netCDF-C++.md +++ b/docs/version-specific/supported-software/n/netCDF-C++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # netCDF-C++ NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. @@ -7,3 +11,6 @@ NetCDF (network Common Data Form) is a set of software libraries and machine-i version | toolchain --------|---------- ``4.2`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/netCDF-C++4.md b/docs/version-specific/supported-software/n/netCDF-C++4.md index b16832c7e..fd998193a 100644 --- a/docs/version-specific/supported-software/n/netCDF-C++4.md +++ b/docs/version-specific/supported-software/n/netCDF-C++4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # netCDF-C++4 NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. @@ -32,3 +36,6 @@ version | versionsuffix | toolchain ``4.3.1`` | | ``iimpi/2021b`` ``4.3.1`` | | ``iimpi/2022a`` ``4.3.1`` | | ``iimpi/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/netCDF-Fortran.md b/docs/version-specific/supported-software/n/netCDF-Fortran.md index 08bcc865e..c8a9fa014 100644 --- a/docs/version-specific/supported-software/n/netCDF-Fortran.md +++ b/docs/version-specific/supported-software/n/netCDF-Fortran.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # netCDF-Fortran NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. @@ -54,3 +58,6 @@ version | versionsuffix | toolchain ``4.6.1`` | | ``gompi/2023b`` ``4.6.1`` | | ``iimpi/2023a`` ``4.6.1`` | | ``iimpi/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/netCDF.md b/docs/version-specific/supported-software/n/netCDF.md index be6a5151f..429cb6804 100644 --- a/docs/version-specific/supported-software/n/netCDF.md +++ b/docs/version-specific/supported-software/n/netCDF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # netCDF NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. @@ -68,3 +72,6 @@ version | versionsuffix | toolchain ``4.9.2`` | | ``gompi/2023b`` ``4.9.2`` | | ``iimpi/2023a`` ``4.9.2`` | | ``iimpi/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/netMHC.md b/docs/version-specific/supported-software/n/netMHC.md index 248f4f842..a7c3a0641 100644 --- a/docs/version-specific/supported-software/n/netMHC.md +++ b/docs/version-specific/supported-software/n/netMHC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # netMHC NetMHC 4.0 predicts binding of peptides to a number of different HLA alleles using artificial neural networks (ANN). @@ -7,3 +11,6 @@ NetMHC 4.0 predicts binding of peptides to a number of different HLA alleles us version | toolchain --------|---------- ``4.0a`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/netMHCII.md b/docs/version-specific/supported-software/n/netMHCII.md index 7bce1b1c3..36df5dacb 100644 --- a/docs/version-specific/supported-software/n/netMHCII.md +++ b/docs/version-specific/supported-software/n/netMHCII.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # netMHCII NetMHCII 2.3 server predicts binding of peptides to HLA-DR, HLA-DQ, HLA-DP and mouse MHC class II alleles using articial neuron networks. Predictions can be obtained for 25 HLA-DR alleles, 20 HLA-DQ, 9 HLA-DP, and 7 mouse H2 class II alleles. @@ -7,3 +11,6 @@ NetMHCII 2.3 server predicts binding of peptides to HLA-DR, HLA-DQ, HLA-DP and version | toolchain --------|---------- ``2.3`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/netMHCIIpan.md b/docs/version-specific/supported-software/n/netMHCIIpan.md index d350a6d2b..4ec6460df 100644 --- a/docs/version-specific/supported-software/n/netMHCIIpan.md +++ b/docs/version-specific/supported-software/n/netMHCIIpan.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # netMHCIIpan The NetMHCIIpan software predicts binding of peptides to MHC class II molecules. The predictions are available for the three human MHC class II isotypes HLA-DR, HLA-DP and HLA-DQ, as well as mouse molecules (H-2). @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.2`` | ``GCCcore/7.3.0`` ``3.2`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/netMHCpan.md b/docs/version-specific/supported-software/n/netMHCpan.md index 37da62ae2..9842f1386 100644 --- a/docs/version-specific/supported-software/n/netMHCpan.md +++ b/docs/version-specific/supported-software/n/netMHCpan.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # netMHCpan The NetMHCpan software predicts binding of peptides to any known MHC molecule using artificial neural networks (ANNs). @@ -7,3 +11,6 @@ The NetMHCpan software predicts binding of peptides to any known MHC molecule u version | toolchain --------|---------- ``4.0a`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/netcdf4-python.md b/docs/version-specific/supported-software/n/netcdf4-python.md index 21ce4d010..223673764 100644 --- a/docs/version-specific/supported-software/n/netcdf4-python.md +++ b/docs/version-specific/supported-software/n/netcdf4-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # netcdf4-python Python/numpy interface to netCDF. @@ -33,3 +37,6 @@ version | versionsuffix | toolchain ``1.6.3`` | | ``foss/2022b`` ``1.6.4`` | | ``foss/2023a`` ``1.6.5`` | | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/netloc.md b/docs/version-specific/supported-software/n/netloc.md index 36e0d04ff..11268a979 100644 --- a/docs/version-specific/supported-software/n/netloc.md +++ b/docs/version-specific/supported-software/n/netloc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # netloc The Portable Network Locality (netloc) software package provides network topology discovery tools, and an abstract representation of those networks topologies for a range of network types and configurations. It is provided as a companion to the Portable Hardware Locality (hwloc) package. @@ -7,3 +11,6 @@ The Portable Network Locality (netloc) software package provides network topolo version | toolchain --------|---------- ``0.5`` | ``GCC/4.8.3`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nettle.md b/docs/version-specific/supported-software/n/nettle.md index b5e2212b0..7ad538f1f 100644 --- a/docs/version-specific/supported-software/n/nettle.md +++ b/docs/version-specific/supported-software/n/nettle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nettle Nettle is a cryptographic library that is designed to fit easily in more or less any context: In crypto toolkits for object-oriented languages (C++, Python, Pike, ...), in applications like LSH or GNUPG, or even in kernel space. @@ -33,3 +37,6 @@ version | toolchain ``3.8.1`` | ``GCCcore/12.2.0`` ``3.9.1`` | ``GCCcore/12.3.0`` ``3.9.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/networkTools.md b/docs/version-specific/supported-software/n/networkTools.md index d3e27a408..4c3bbd3d5 100644 --- a/docs/version-specific/supported-software/n/networkTools.md +++ b/docs/version-specific/supported-software/n/networkTools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # networkTools Dynamical Network Analysis is a method of characterizing allosteric signalling through biomolecular complexes. @@ -7,3 +11,6 @@ Dynamical Network Analysis is a method of characterizing allosteric signalling t version | toolchain --------|---------- ``2`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/networkx.md b/docs/version-specific/supported-software/n/networkx.md index d4dd37208..bbb06416c 100644 --- a/docs/version-specific/supported-software/n/networkx.md +++ b/docs/version-specific/supported-software/n/networkx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # networkx NetworkX is a Python package for the creation, manipulation, and study of the structure, dynamics, and functions of complex networks. @@ -44,3 +48,6 @@ version | versionsuffix | toolchain ``3.0`` | | ``gfbf/2022b`` ``3.1`` | | ``gfbf/2023a`` ``3.2.1`` | | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nf-core-mag.md b/docs/version-specific/supported-software/n/nf-core-mag.md index e15337f0e..675fde0b1 100644 --- a/docs/version-specific/supported-software/n/nf-core-mag.md +++ b/docs/version-specific/supported-software/n/nf-core-mag.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nf-core-mag The Nextflow pipeline 'mag' ported to EasyBuild/EESSI. @@ -7,3 +11,6 @@ The Nextflow pipeline 'mag' ported to EasyBuild/EESSI. version | toolchain --------|---------- ``20221110`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nf-core.md b/docs/version-specific/supported-software/n/nf-core.md index 899508837..b922cd167 100644 --- a/docs/version-specific/supported-software/n/nf-core.md +++ b/docs/version-specific/supported-software/n/nf-core.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nf-core Python package with helper tools for the nf-core community. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.10`` | ``foss/2022b`` ``2.13.1`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nghttp2.md b/docs/version-specific/supported-software/n/nghttp2.md index b8f4bdf44..a95843fca 100644 --- a/docs/version-specific/supported-software/n/nghttp2.md +++ b/docs/version-specific/supported-software/n/nghttp2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nghttp2 This is an implementation of the Hypertext Transfer Protocol version 2 in C. The framing layer of HTTP/2 is implemented as a reusable C library. On top of that, we have implemented an HTTP/2 client, server and proxy. We have also developed load test and benchmarking tools for HTTP/2. An HPACK encoder and decoder are available as a public API. @@ -9,3 +13,6 @@ version | toolchain ``1.48.0`` | ``GCC/11.2.0`` ``1.48.0`` | ``GCC/11.3.0`` ``1.58.0`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nghttp3.md b/docs/version-specific/supported-software/n/nghttp3.md index ed1763a83..f3cdfe53f 100644 --- a/docs/version-specific/supported-software/n/nghttp3.md +++ b/docs/version-specific/supported-software/n/nghttp3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nghttp3 nghttp3 is an implementation of RFC 9114 HTTP/3 mapping over QUIC and RFC 9204 QPACK in C. It does not depend on any particular QUIC transport implementation. @@ -9,3 +13,6 @@ version | toolchain ``0.6.0`` | ``GCCcore/11.2.0`` ``0.6.0`` | ``GCCcore/11.3.0`` ``1.3.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nglview.md b/docs/version-specific/supported-software/n/nglview.md index 67976043d..e2dae0967 100644 --- a/docs/version-specific/supported-software/n/nglview.md +++ b/docs/version-specific/supported-software/n/nglview.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nglview IPython widget to interactively view molecular structures and trajectories. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``3.0.3`` | | ``foss/2021a`` ``3.0.3`` | | ``foss/2022a`` ``3.1.2`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/ngspice.md b/docs/version-specific/supported-software/n/ngspice.md index 6262f49df..476ae5075 100644 --- a/docs/version-specific/supported-software/n/ngspice.md +++ b/docs/version-specific/supported-software/n/ngspice.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ngspice Ngspice is a mixed-level/mixed-signal circuit simulator. Its code is based on three open source software packages: Spice3f5, Cider1b1 and Xspice. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``31`` | ``foss/2019b`` ``39`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/ngtcp2.md b/docs/version-specific/supported-software/n/ngtcp2.md index fa5324b18..130def39a 100644 --- a/docs/version-specific/supported-software/n/ngtcp2.md +++ b/docs/version-specific/supported-software/n/ngtcp2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ngtcp2 'Call it TCP/2. One More Time.' ngtcp2 project is an effort to implement RFC9000 QUIC protocol. @@ -9,3 +13,6 @@ version | toolchain ``0.7.0`` | ``GCC/11.2.0`` ``0.7.0`` | ``GCC/11.3.0`` ``1.2.0`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nichenetr.md b/docs/version-specific/supported-software/n/nichenetr.md index 7eca7d024..5d3d669c7 100644 --- a/docs/version-specific/supported-software/n/nichenetr.md +++ b/docs/version-specific/supported-software/n/nichenetr.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nichenetr R implementation of the NicheNet method, to predict active ligand-target links between interacting cells @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.1.1-20230223`` | ``-R-4.2.1`` | ``foss/2022a`` ``2.0.4`` | ``-R-4.2.2`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nifti2dicom.md b/docs/version-specific/supported-software/n/nifti2dicom.md index 3fc9c4e38..10997ee14 100644 --- a/docs/version-specific/supported-software/n/nifti2dicom.md +++ b/docs/version-specific/supported-software/n/nifti2dicom.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nifti2dicom Nifti2Dicom is a conversion tool that converts 3D NIfTI files (and other formats supported by ITK, including Analyze, MetaImage Nrrd and VTK) to DICOM. Unlike other conversion tools, it can import a DICOM file that is used to import the patient and study DICOM tags, and allows you to edit the accession number and other DICOM tags, in order to create a valid DICOM that can be imported in a PACS. @@ -7,3 +11,6 @@ Nifti2Dicom is a conversion tool that converts 3D NIfTI files (and other formats version | toolchain --------|---------- ``0.4.11`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nlohmann_json.md b/docs/version-specific/supported-software/n/nlohmann_json.md index 7e4f3b680..9976df06a 100644 --- a/docs/version-specific/supported-software/n/nlohmann_json.md +++ b/docs/version-specific/supported-software/n/nlohmann_json.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nlohmann_json JSON for Modern C++ @@ -12,3 +16,6 @@ version | toolchain ``3.11.2`` | ``GCCcore/12.2.0`` ``3.11.2`` | ``GCCcore/12.3.0`` ``3.11.3`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nnU-Net.md b/docs/version-specific/supported-software/n/nnU-Net.md index 3fbc86286..da64245a7 100644 --- a/docs/version-specific/supported-software/n/nnU-Net.md +++ b/docs/version-specific/supported-software/n/nnU-Net.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nnU-Net nnU-Net is the first segmentation method that is designed to deal with the dataset diversity found in the domain It condenses and automates the keys decisions for designing a successful segmentation pipeline for any given dataset. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.7.0`` | ``foss/2020b`` ``1.7.0`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nodejs.md b/docs/version-specific/supported-software/n/nodejs.md index 5c7553907..863fcf773 100644 --- a/docs/version-specific/supported-software/n/nodejs.md +++ b/docs/version-specific/supported-software/n/nodejs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nodejs Node.js is a platform built on Chrome's JavaScript runtime for easily building fast, scalable network applications. Node.js uses an event-driven, non-blocking I/O model that makes it lightweight and efficient, perfect for data-intensive real-time applications that run across distributed devices. @@ -23,3 +27,6 @@ version | toolchain ``4.4.7`` | ``foss/2016a`` ``6.10.3`` | ``foss/2017a`` ``8.9.4`` | ``foss/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/noise.md b/docs/version-specific/supported-software/n/noise.md index 6b4e281a0..56ab13b01 100644 --- a/docs/version-specific/supported-software/n/noise.md +++ b/docs/version-specific/supported-software/n/noise.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # noise Native-code and shader implementations of Perlin noise for Python @@ -7,3 +11,6 @@ Native-code and shader implementations of Perlin noise for Python version | toolchain --------|---------- ``1.2.2`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nose-parameterized.md b/docs/version-specific/supported-software/n/nose-parameterized.md index 5d2f63319..595831e4d 100644 --- a/docs/version-specific/supported-software/n/nose-parameterized.md +++ b/docs/version-specific/supported-software/n/nose-parameterized.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nose-parameterized Parameterized testing with any Python test framework. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.5.0`` | ``-Python-3.5.1`` | ``foss/2016a`` ``0.5.0`` | ``-Python-3.5.2`` | ``intel/2016b`` ``0.6.0`` | ``-Python-3.6.1`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nose3.md b/docs/version-specific/supported-software/n/nose3.md index c98b81d90..a385f2351 100644 --- a/docs/version-specific/supported-software/n/nose3.md +++ b/docs/version-specific/supported-software/n/nose3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nose3 Nose extends unittest to make testing easier. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.3.8`` | ``GCCcore/11.3.0`` ``1.3.8`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/novaSTA.md b/docs/version-specific/supported-software/n/novaSTA.md index 9bc3c942a..4940285a5 100644 --- a/docs/version-specific/supported-software/n/novaSTA.md +++ b/docs/version-specific/supported-software/n/novaSTA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # novaSTA C++ version of subtomogram averaging (SA) scripts from TOM/AV3 package https://doi.org/10.1073/pnas.0409178102. Both CPU and GPU parallelization is supported although the latter performs significantly worse in terms of processing time (the code is not well optimized) and is thus not recommended for larger datasets. @@ -7,3 +11,6 @@ C++ version of subtomogram averaging (SA) scripts from TOM/AV3 package version | versionsuffix | toolchain --------|---------------|---------- ``1.1`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/novoalign.md b/docs/version-specific/supported-software/n/novoalign.md index da383f7aa..c0b452198 100644 --- a/docs/version-specific/supported-software/n/novoalign.md +++ b/docs/version-specific/supported-software/n/novoalign.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # novoalign Map short reads onto a reference genome from Illumina, Ion Torrent, and 454 next generation sequencing platforms @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.09.00`` | | ``system`` ``3.09.01`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/npstat.md b/docs/version-specific/supported-software/n/npstat.md index acd9253d1..0acadc892 100644 --- a/docs/version-specific/supported-software/n/npstat.md +++ b/docs/version-specific/supported-software/n/npstat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # npstat npstat implements some population genetics tests and estimators that can be applied to pooled sequences from Next Generation Sequencing experiments. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.99`` | ``foss/2016a`` ``0.99`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nsync.md b/docs/version-specific/supported-software/n/nsync.md index 24b4e3f5d..df181da79 100644 --- a/docs/version-specific/supported-software/n/nsync.md +++ b/docs/version-specific/supported-software/n/nsync.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nsync nsync is a C library that exports various synchronization primitives, such as mutexes @@ -14,3 +18,6 @@ version | toolchain ``1.25.0`` | ``GCCcore/11.3.0`` ``1.26.0`` | ``GCCcore/12.2.0`` ``1.26.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/ntCard.md b/docs/version-specific/supported-software/n/ntCard.md index c4f962eb8..a2780c954 100644 --- a/docs/version-specific/supported-software/n/ntCard.md +++ b/docs/version-specific/supported-software/n/ntCard.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ntCard ntCard is a streaming algorithm for estimating the frequencies of k-mers in genomics datasets. @@ -9,3 +13,6 @@ version | toolchain ``1.2.1`` | ``GCC/11.2.0`` ``1.2.1`` | ``GCC/8.3.0`` ``1.2.2`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/ntEdit.md b/docs/version-specific/supported-software/n/ntEdit.md index 6fc215b44..7a7e30662 100644 --- a/docs/version-specific/supported-software/n/ntEdit.md +++ b/docs/version-specific/supported-software/n/ntEdit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ntEdit ntEdit is a fast and scalable genomics application for polishing genome assembly drafts. @@ -7,3 +11,6 @@ ntEdit is a fast and scalable genomics application for polishing genome assembly version | toolchain --------|---------- ``1.3.1`` | ``iccifort/2018.3.222-GCC-7.3.0-2.30`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/ntHits.md b/docs/version-specific/supported-software/n/ntHits.md index d14f4a60c..4110cb8e1 100644 --- a/docs/version-specific/supported-software/n/ntHits.md +++ b/docs/version-specific/supported-software/n/ntHits.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ntHits ntHits is a method for identifying repeats in high-throughput DNA sequencing data. @@ -7,3 +11,6 @@ ntHits is a method for identifying repeats in high-throughput DNA sequencing dat version | toolchain --------|---------- ``0.0.1`` | ``iccifort/2018.3.222-GCC-7.3.0-2.30`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/num2words.md b/docs/version-specific/supported-software/n/num2words.md index bf56a3e92..684a458d3 100644 --- a/docs/version-specific/supported-software/n/num2words.md +++ b/docs/version-specific/supported-software/n/num2words.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # num2words Modules to convert numbers to words. 42 --> forty-two @@ -7,3 +11,6 @@ Modules to convert numbers to words. 42 --> forty-two version | toolchain --------|---------- ``0.5.10`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/numactl.md b/docs/version-specific/supported-software/n/numactl.md index 304e6fcd3..32f273651 100644 --- a/docs/version-specific/supported-software/n/numactl.md +++ b/docs/version-specific/supported-software/n/numactl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # numactl The numactl program allows you to run your application program on specific cpu's and memory nodes. It does this by supplying a NUMA memory policy to the operating system before running your program. The libnuma library provides convenient ways for you to add NUMA memory policies into your own program. @@ -44,3 +48,6 @@ version | toolchain ``2.0.16`` | ``GCCcore/13.2.0`` ``2.0.18`` | ``GCCcore/13.3.0`` ``2.0.9`` | ``GCC/4.8.3`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/numba.md b/docs/version-specific/supported-software/n/numba.md index 74516f3b0..cb8e92fdc 100644 --- a/docs/version-specific/supported-software/n/numba.md +++ b/docs/version-specific/supported-software/n/numba.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # numba Numba is an Open Source NumPy-aware optimizing compiler for Python sponsored by Continuum Analytics, Inc. It uses the remarkable LLVM compiler infrastructure to compile Python syntax to machine code. @@ -36,3 +40,6 @@ version | versionsuffix | toolchain ``0.56.4`` | | ``foss/2022a`` ``0.58.1`` | | ``foss/2022b`` ``0.58.1`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/numdiff.md b/docs/version-specific/supported-software/n/numdiff.md index b1057e9d7..d639031cb 100644 --- a/docs/version-specific/supported-software/n/numdiff.md +++ b/docs/version-specific/supported-software/n/numdiff.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # numdiff Numdiff (which I will also write numdiff) is a little program that can be used to compare putatively similar files line by line and field by field, ignoring small numeric differences or/and different numeric formats. Equivalently, Numdiff is a program with the capability to appropriately compare files containing numerical fields (and not only). @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``5.9.0`` | ``GCCcore/10.2.0`` ``5.9.0`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/numexpr.md b/docs/version-specific/supported-software/n/numexpr.md index d18fdccca..2205e4c08 100644 --- a/docs/version-specific/supported-software/n/numexpr.md +++ b/docs/version-specific/supported-software/n/numexpr.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # numexpr The numexpr package evaluates multiple-operator array expressions many times faster than NumPy can. It accepts the expression as a string, analyzes it, rewrites it more efficiently, and compiles it on the fly into code for its internal virtual machine (VM). Due to its integrated just-in-time (JIT) compiler, it does not require a compiler at runtime. @@ -31,3 +35,6 @@ version | versionsuffix | toolchain ``2.8.1`` | | ``foss/2021a`` ``2.8.1`` | | ``intel/2021a`` ``2.8.4`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/numpy.md b/docs/version-specific/supported-software/n/numpy.md index d1b90fd56..0a721cab6 100644 --- a/docs/version-specific/supported-software/n/numpy.md +++ b/docs/version-specific/supported-software/n/numpy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # numpy NumPy is the fundamental package for scientific computing with Python. It contains among other things: a powerful N-dimensional array object, sophisticated (broadcasting) functions, tools for integrating C/C++ and Fortran code, useful linear algebra, Fourier transform, and random number capabilities. Besides its obvious scientific uses, NumPy can also be used as an efficient multi-dimensional container of generic data. Arbitrary data-types can be defined. This allows NumPy to seamlessly and speedily integrate with a wide variety of databases. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``1.8.2`` | ``-Python-2.7.11`` | ``foss/2016a`` ``1.8.2`` | ``-Python-2.7.11`` | ``intel/2016a`` ``1.9.2`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nvitop.md b/docs/version-specific/supported-software/n/nvitop.md index 1bef69dcd..5fe238f91 100644 --- a/docs/version-specific/supported-software/n/nvitop.md +++ b/docs/version-specific/supported-software/n/nvitop.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nvitop An interactive NVIDIA-GPU process viewer and beyond, the one-stop solution for GPU process management. @@ -7,3 +11,6 @@ An interactive NVIDIA-GPU process viewer and beyond, the one-stop solution for version | versionsuffix | toolchain --------|---------------|---------- ``1.3.2`` | ``-CUDA-12.3.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nvofbf.md b/docs/version-specific/supported-software/n/nvofbf.md index 19f58544a..18783f621 100644 --- a/docs/version-specific/supported-software/n/nvofbf.md +++ b/docs/version-specific/supported-software/n/nvofbf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nvofbf NVHPC based toolchain, including OpenMPI for MPI support, OpenBLAS (via FlexiBLAS for BLAS and LAPACK support), FFTW and ScaLAPACK. @@ -7,3 +11,6 @@ NVHPC based toolchain, including OpenMPI for MPI support, OpenBLAS (via FlexiBLA version | toolchain --------|---------- ``2022.07`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nvompi.md b/docs/version-specific/supported-software/n/nvompi.md index 2ab0374cb..eb32c3699 100644 --- a/docs/version-specific/supported-software/n/nvompi.md +++ b/docs/version-specific/supported-software/n/nvompi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nvompi NVHPC based compiler toolchain, including OpenMPI for MPI support. @@ -7,3 +11,6 @@ NVHPC based compiler toolchain, including OpenMPI for MPI support. version | toolchain --------|---------- ``2022.07`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/n/nvtop.md b/docs/version-specific/supported-software/n/nvtop.md index 342d514cc..ed65c4e64 100644 --- a/docs/version-specific/supported-software/n/nvtop.md +++ b/docs/version-specific/supported-software/n/nvtop.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # nvtop htop-like GPU usage monitor @@ -15,3 +19,6 @@ version | toolchain ``2.0.2`` | ``GCCcore/11.3.0`` ``3.0.1`` | ``GCCcore/12.2.0`` ``3.1.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OBITools.md b/docs/version-specific/supported-software/o/OBITools.md index 63634716a..65666e98b 100644 --- a/docs/version-specific/supported-software/o/OBITools.md +++ b/docs/version-specific/supported-software/o/OBITools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OBITools OBITools is a set of python programs developed to simplify the manipulation of sequence files. They were mainly designed to for analyzing Next Generation Sequencer outputs (454 or Illumina) in the context of DNA Metabarcoding. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.2.13`` | ``-Python-2.7.15`` | ``foss/2019a`` ``1.2.9`` | ``-Python-2.7.11`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OBITools3.md b/docs/version-specific/supported-software/o/OBITools3.md index f565b5808..34be9a4eb 100644 --- a/docs/version-specific/supported-software/o/OBITools3.md +++ b/docs/version-specific/supported-software/o/OBITools3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OBITools3 A package for the management of analyses and data in DNA metabarcoding. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.0.1b26`` | ``GCCcore/12.3.0`` ``3.0.1b8`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OCNet.md b/docs/version-specific/supported-software/o/OCNet.md index 77110975b..66818b7ae 100644 --- a/docs/version-specific/supported-software/o/OCNet.md +++ b/docs/version-specific/supported-software/o/OCNet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OCNet Generate and analyze Optimal Channel Networks (OCNs): oriented spanning trees reproducing all scaling features characteristic of real, natural river networks. As such, they can be used in a variety of numerical experiments in the fields of hydrology, ecology and epidemiology. @@ -7,3 +11,6 @@ Generate and analyze Optimal Channel Networks (OCNs): oriented spanning trees re version | versionsuffix | toolchain --------|---------------|---------- ``0.2.0`` | ``-R-3.6.0`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OCaml.md b/docs/version-specific/supported-software/o/OCaml.md index d4848d17a..5afe9bee9 100644 --- a/docs/version-specific/supported-software/o/OCaml.md +++ b/docs/version-specific/supported-software/o/OCaml.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OCaml OCaml is a general purpose industrial-strength programming language with an emphasis on expressiveness and safety. Developed for more than 20 years at Inria it benefits from one of the most advanced type systems and supports functional, imperative and object-oriented styles of programming. @@ -10,3 +14,6 @@ version | toolchain ``4.07.1`` | ``foss/2018b`` ``4.14.0`` | ``GCC/11.3.0`` ``5.1.1`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OGDF.md b/docs/version-specific/supported-software/o/OGDF.md index 41cc2b1c8..c9895de45 100644 --- a/docs/version-specific/supported-software/o/OGDF.md +++ b/docs/version-specific/supported-software/o/OGDF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OGDF OGDF is a self-contained C++ library for graph algorithms, in particular for (but not restricted to) automatic graph drawing. It offers sophisticated algorithms and data structures to use within your own applications or scientific projects. @@ -7,3 +11,6 @@ OGDF is a self-contained C++ library for graph algorithms, in particular for (bu version | toolchain --------|---------- ``dogwood-202202`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OMA.md b/docs/version-specific/supported-software/o/OMA.md index 8575de8be..415477698 100644 --- a/docs/version-specific/supported-software/o/OMA.md +++ b/docs/version-specific/supported-software/o/OMA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OMA The OMA ('Orthologous MAtrix') project is a method and database for the inference of orthologs among complete genomes @@ -7,3 +11,6 @@ The OMA ('Orthologous MAtrix') project is a method and database for the inferenc version | toolchain --------|---------- ``2.1.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OMERO.insight.md b/docs/version-specific/supported-software/o/OMERO.insight.md index 80c3c6de8..76c711aae 100644 --- a/docs/version-specific/supported-software/o/OMERO.insight.md +++ b/docs/version-specific/supported-software/o/OMERO.insight.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OMERO.insight The OMERO.insight Project is a sub-project of the Open Microscopy Environment Project, OME that focuses on delivering a client for the visualization and manipulation of both image data and metadata maintained at an OMERO server site. @@ -7,3 +11,6 @@ The OMERO.insight Project is a sub-project of the Open Microscopy Environment Pr version | versionsuffix | toolchain --------|---------------|---------- ``5.8.3`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OMERO.py.md b/docs/version-specific/supported-software/o/OMERO.py.md index dea1cb65c..17c339c92 100644 --- a/docs/version-specific/supported-software/o/OMERO.py.md +++ b/docs/version-specific/supported-software/o/OMERO.py.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OMERO.py OMERO.py provides Python bindings to the OMERO.blitz server as well as a pluggable command-line interface. @@ -7,3 +11,6 @@ OMERO.py provides Python bindings to the OMERO.blitz server as well as a pluggab version | toolchain --------|---------- ``5.17.0`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/ONNX-Runtime.md b/docs/version-specific/supported-software/o/ONNX-Runtime.md index a05844dc4..91f50cfd3 100644 --- a/docs/version-specific/supported-software/o/ONNX-Runtime.md +++ b/docs/version-specific/supported-software/o/ONNX-Runtime.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ONNX-Runtime ONNX Runtime inference can enable faster customer experiences and lower costs, supporting models from deep learning frameworks such as PyTorch and TensorFlow/Keras as well as classical machine learning libraries such as scikit-learn, LightGBM, XGBoost, etc. ONNX Runtime is compatible with different hardware, drivers, and operating systems, and provides optimal performance by leveraging hardware accelerators where applicable alongside graph optimizations and transforms. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.10.0`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``1.10.0`` | | ``foss/2021a`` ``1.16.3`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/ONNX.md b/docs/version-specific/supported-software/o/ONNX.md index 0655b140b..db36f16f8 100644 --- a/docs/version-specific/supported-software/o/ONNX.md +++ b/docs/version-specific/supported-software/o/ONNX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ONNX Open Neural Network Exchange (ONNX) is an open ecosystem that empowers AI developers to choose the right tools as their project evolves. ONNX provides an open source format for AI models, both deep learning and traditional ML. It defines an extensible computation graph model, as well as definitions of built-in operators and standard data types. Currently we focus on the capabilities needed for inferencing (scoring). @@ -9,3 +13,6 @@ version | toolchain ``1.11.0`` | ``foss/2021a`` ``1.15.0`` | ``foss/2022b`` ``1.15.0`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OOMPA.md b/docs/version-specific/supported-software/o/OOMPA.md index 6bc6c487a..aeaca627e 100644 --- a/docs/version-specific/supported-software/o/OOMPA.md +++ b/docs/version-specific/supported-software/o/OOMPA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OOMPA OOMPA is a suite of R packages for the analysis of gene expression (RNA), proteomics profiling, and other high throughput molecular biology data. @@ -7,3 +11,6 @@ OOMPA is a suite of R packages for the analysis of gene expression (RNA), proteo version | versionsuffix | toolchain --------|---------------|---------- ``3.1.2`` | ``-R-3.3.1`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OPARI2.md b/docs/version-specific/supported-software/o/OPARI2.md index 85c896da5..2d558c504 100644 --- a/docs/version-specific/supported-software/o/OPARI2.md +++ b/docs/version-specific/supported-software/o/OPARI2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OPARI2 OPARI2, the successor of Forschungszentrum Juelich's OPARI, is a source-to-source instrumentation tool for OpenMP and hybrid codes. It surrounds OpenMP directives and runtime library calls with calls to the POMP2 measurement interface. @@ -17,3 +21,6 @@ version | toolchain ``2.0.7`` | ``GCCcore/12.2.0`` ``2.0.7`` | ``GCCcore/12.3.0`` ``2.0.8`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OPERA-MS.md b/docs/version-specific/supported-software/o/OPERA-MS.md index a13126594..d258fe155 100644 --- a/docs/version-specific/supported-software/o/OPERA-MS.md +++ b/docs/version-specific/supported-software/o/OPERA-MS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OPERA-MS OPERA-MS is a hybrid metagenomic assembler which combines the advantages of short and long-read technologies to provide high quality assemblies, addressing issues of low contiguity for short-read only assemblies, and low base-pair quality for long-read only assemblies. @@ -7,3 +11,6 @@ OPERA-MS is a hybrid metagenomic assembler which combines the advantages of sho version | versionsuffix | toolchain --------|---------------|---------- ``0.9.0-20200802`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OPERA.md b/docs/version-specific/supported-software/o/OPERA.md index 2b388aea4..6a48a77a8 100644 --- a/docs/version-specific/supported-software/o/OPERA.md +++ b/docs/version-specific/supported-software/o/OPERA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OPERA An optimal genome scaffolding program @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.0.6`` | ``-Perl-5.28.0`` | ``foss/2018b`` ``2.0.6`` | ``-Perl-5.28.0`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OR-Tools.md b/docs/version-specific/supported-software/o/OR-Tools.md index 7b2b68692..8bc6d7d72 100644 --- a/docs/version-specific/supported-software/o/OR-Tools.md +++ b/docs/version-specific/supported-software/o/OR-Tools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OR-Tools Google Optimization Tools (a.k.a., OR-Tools) is an open-source, fast and portable software suite for solving combinatorial optimization problems. @@ -7,3 +11,6 @@ Google Optimization Tools (a.k.a., OR-Tools) is an open-source, fast and portabl version | versionsuffix | toolchain --------|---------------|---------- ``7.1`` | ``-Python-3.7.2`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/ORCA.md b/docs/version-specific/supported-software/o/ORCA.md index 3fa63d344..53ada53ad 100644 --- a/docs/version-specific/supported-software/o/ORCA.md +++ b/docs/version-specific/supported-software/o/ORCA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ORCA ORCA is a flexible, efficient and easy-to-use general purpose tool for quantum chemistry with specific emphasis on spectroscopic properties of open-shell molecules. It features a wide variety of standard quantum chemical methods ranging from semiempirical methods to DFT to single- and multireference correlated ab initio methods. It can also treat environmental and relativistic effects. @@ -23,3 +27,6 @@ version | versionsuffix | toolchain ``5.0.3`` | | ``gompi/2021b`` ``5.0.4`` | | ``gompi/2022a`` ``5.0.4`` | | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/ORFfinder.md b/docs/version-specific/supported-software/o/ORFfinder.md index 4cb6815d8..6015be83b 100644 --- a/docs/version-specific/supported-software/o/ORFfinder.md +++ b/docs/version-specific/supported-software/o/ORFfinder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ORFfinder ORF finder searches for open reading frames (ORFs) in the DNA sequence you enter. The program returns the range of each ORF, along with its protein translation. Use ORF finder to search newly sequenced DNA for potential protein encoding segments, verify predicted protein using newly developed SMART BLAST or regular BLASTP. @@ -7,3 +11,6 @@ ORF finder searches for open reading frames (ORFs) in the DNA sequence you ente version | toolchain --------|---------- ``0.4.3`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OSPRay.md b/docs/version-specific/supported-software/o/OSPRay.md index d8aab6420..2e5ef2c3e 100644 --- a/docs/version-specific/supported-software/o/OSPRay.md +++ b/docs/version-specific/supported-software/o/OSPRay.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OSPRay Open, Scalable, and Portable Ray Tracing Engine @@ -7,3 +11,6 @@ Open, Scalable, and Portable Ray Tracing Engine version | toolchain --------|---------- ``2.5.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OSU-Micro-Benchmarks.md b/docs/version-specific/supported-software/o/OSU-Micro-Benchmarks.md index 883348661..4aa1b6b08 100644 --- a/docs/version-specific/supported-software/o/OSU-Micro-Benchmarks.md +++ b/docs/version-specific/supported-software/o/OSU-Micro-Benchmarks.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OSU-Micro-Benchmarks OSU Micro-Benchmarks @@ -47,3 +51,6 @@ version | versionsuffix | toolchain ``7.2`` | ``-CUDA-12.1.1`` | ``gompi/2023a`` ``7.2`` | | ``gompi/2023b`` ``7.4`` | | ``gompi/2024.05`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OTF2.md b/docs/version-specific/supported-software/o/OTF2.md index a8e211d5d..e3fa211ad 100644 --- a/docs/version-specific/supported-software/o/OTF2.md +++ b/docs/version-specific/supported-software/o/OTF2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OTF2 The Open Trace Format 2 is a highly scalable, memory efficient event trace data format plus support library. It is the new standard trace format for Scalasca, Vampir, and TAU and is open for other tools. @@ -19,3 +23,6 @@ version | toolchain ``3.0.3`` | ``GCCcore/12.2.0`` ``3.0.3`` | ``GCCcore/12.3.0`` ``3.0.3`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OVITO.md b/docs/version-specific/supported-software/o/OVITO.md index e5e4ebf6e..7a98880a7 100644 --- a/docs/version-specific/supported-software/o/OVITO.md +++ b/docs/version-specific/supported-software/o/OVITO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OVITO OVITO is a scientific visualization and data analysis solution for atomistic and other particle-based models. It helps scientists gain meaningful and quick insights from numerical simulation results. @@ -7,3 +11,6 @@ OVITO is a scientific visualization and data analysis solution for atomistic and version | versionsuffix | toolchain --------|---------------|---------- ``3.7.11`` | ``-basic`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/Oases.md b/docs/version-specific/supported-software/o/Oases.md index af2dcb956..f707e11ec 100644 --- a/docs/version-specific/supported-software/o/Oases.md +++ b/docs/version-specific/supported-software/o/Oases.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Oases Oases is a de novo transcriptome assembler designed to produce transcripts from short read sequencing technologies, such as Illumina, SOLiD, or 454 in the absence of any genomic assembly. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.2.08`` | | ``foss/2016b`` ``0.2.08`` | ``-kmer_101`` | ``intel/2017b`` ``20180312`` | | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/Octave.md b/docs/version-specific/supported-software/o/Octave.md index 558e164e0..eec4ade5c 100644 --- a/docs/version-specific/supported-software/o/Octave.md +++ b/docs/version-specific/supported-software/o/Octave.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Octave GNU Octave is a high-level interpreted language, primarily intended for numerical computations. @@ -18,3 +22,6 @@ version | versionsuffix | toolchain ``5.1.0`` | | ``foss/2019b`` ``6.2.0`` | | ``foss/2020b`` ``7.1.0`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/Octopus-vcf.md b/docs/version-specific/supported-software/o/Octopus-vcf.md index 993e7ff95..cde82b16e 100644 --- a/docs/version-specific/supported-software/o/Octopus-vcf.md +++ b/docs/version-specific/supported-software/o/Octopus-vcf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Octopus-vcf Octopus is a mapping-based variant caller that implements several calling models within a unified haplotype-aware framework. Octopus takes inspiration from particle filtering by constructing a tree of haplotypes and dynamically pruning and extending the tree based on haplotype posterior probabilities in a sequential manner. This allows octopus to implicitly consider all possible haplotypes at a given loci in reasonable time. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.7.1`` | ``foss/2020b`` ``0.7.2`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OmegaFold.md b/docs/version-specific/supported-software/o/OmegaFold.md index 33f55f1e4..93cd65164 100644 --- a/docs/version-specific/supported-software/o/OmegaFold.md +++ b/docs/version-specific/supported-software/o/OmegaFold.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OmegaFold OmegaFold: High-resolution de novo Structure Prediction from Primary Sequence @@ -7,3 +11,6 @@ OmegaFold: High-resolution de novo Structure Prediction from Primary Sequence version | versionsuffix | toolchain --------|---------------|---------- ``1.1.0`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/Omnipose.md b/docs/version-specific/supported-software/o/Omnipose.md index 6a81f9727..a1aa70b9f 100644 --- a/docs/version-specific/supported-software/o/Omnipose.md +++ b/docs/version-specific/supported-software/o/Omnipose.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Omnipose Omnipose is a general image segmentation tool that builds on Cellpose in a number of ways described in our paper. It works for both 2D and 3D images and on any imaging modality or cell shape, so long as you train it on representative images. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.4.4`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.4.4`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/Open-Data-Cube-Core.md b/docs/version-specific/supported-software/o/Open-Data-Cube-Core.md index e80acac0c..f52642f8a 100644 --- a/docs/version-specific/supported-software/o/Open-Data-Cube-Core.md +++ b/docs/version-specific/supported-software/o/Open-Data-Cube-Core.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Open-Data-Cube-Core The Open Data Cube Core provides an integrated gridded data analysis environment for decades of analysis ready earth observation satellite and related data from multiple satellite and other acquisition systems. @@ -7,3 +11,6 @@ The Open Data Cube Core provides an integrated gridded data analysis environment version | versionsuffix | toolchain --------|---------------|---------- ``1.8.3`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenAI-Gym.md b/docs/version-specific/supported-software/o/OpenAI-Gym.md index 009418d1a..a96847a33 100644 --- a/docs/version-specific/supported-software/o/OpenAI-Gym.md +++ b/docs/version-specific/supported-software/o/OpenAI-Gym.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenAI-Gym A toolkit for developing and comparing reinforcement learning algorithms. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.17.1`` | ``-Python-3.7.4`` | ``foss/2019b`` ``0.21.0`` | | ``foss/2021b`` ``0.26.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenBLAS.md b/docs/version-specific/supported-software/o/OpenBLAS.md index 8294ee5c6..4cab3a2d5 100644 --- a/docs/version-specific/supported-software/o/OpenBLAS.md +++ b/docs/version-specific/supported-software/o/OpenBLAS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenBLAS OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version. @@ -47,3 +51,6 @@ version | versionsuffix | toolchain ``0.3.7`` | | ``GCC/8.3.0`` ``0.3.8`` | | ``GCC/9.2.0`` ``0.3.9`` | | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenBabel.md b/docs/version-specific/supported-software/o/OpenBabel.md index 5b11f5b67..e00ff12d2 100644 --- a/docs/version-specific/supported-software/o/OpenBabel.md +++ b/docs/version-specific/supported-software/o/OpenBabel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenBabel Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas. @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``3.1.1`` | | ``gompi/2022a`` ``3.1.1`` | | ``gompi/2023a`` ``3.1.1`` | ``-Python-3.8.2`` | ``iimpi/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenCV.md b/docs/version-specific/supported-software/o/OpenCV.md index 35c1ac45a..c2c7351c0 100644 --- a/docs/version-specific/supported-software/o/OpenCV.md +++ b/docs/version-specific/supported-software/o/OpenCV.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenCV OpenCV (Open Source Computer Vision Library) is an open source computer vision and machine learning software library. OpenCV was built to provide a common infrastructure for computer vision applications and to accelerate the use of machine perception in the commercial products. @@ -44,3 +48,6 @@ version | versionsuffix | toolchain ``4.8.0`` | ``-contrib`` | ``foss/2022b`` ``4.8.1`` | ``-CUDA-12.1.1-contrib`` | ``foss/2023a`` ``4.8.1`` | ``-contrib`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenCensus-python.md b/docs/version-specific/supported-software/o/OpenCensus-python.md index 6263cb2ac..c3f70cdec 100644 --- a/docs/version-specific/supported-software/o/OpenCensus-python.md +++ b/docs/version-specific/supported-software/o/OpenCensus-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenCensus-python OpenCensus for Python. OpenCensus provides a framework to measure a server's resource usage and collect performance stats. This repository contains Python related utilities and supporting software needed by OpenCensus. @@ -7,3 +11,6 @@ OpenCensus for Python. OpenCensus provides a framework to measure a server's res version | toolchain --------|---------- ``0.8.0`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenCoarrays.md b/docs/version-specific/supported-software/o/OpenCoarrays.md index b4a5531be..4435a10b5 100644 --- a/docs/version-specific/supported-software/o/OpenCoarrays.md +++ b/docs/version-specific/supported-software/o/OpenCoarrays.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenCoarrays OpenCoarrays is an open-source software project that supports the coarray Fortran (CAF) parallel programming features of the Fortran 2008 standard and several features proposed for Fortran 2015 in the draft Technical Specification TS 18508 Additional Parallel Features in Fortran. @@ -10,3 +14,6 @@ version | toolchain ``2.2.0`` | ``gompi/2018b`` ``2.8.0`` | ``gompi/2019b`` ``2.9.2`` | ``gompi/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenColorIO.md b/docs/version-specific/supported-software/o/OpenColorIO.md index 986f9bb11..ae3ad9e8a 100644 --- a/docs/version-specific/supported-software/o/OpenColorIO.md +++ b/docs/version-specific/supported-software/o/OpenColorIO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenColorIO OpenColorIO (OCIO) is a complete color management solution geared towards motion picture production with an emphasis on visual effects and computer animation. @@ -7,3 +11,6 @@ OpenColorIO (OCIO) is a complete color management solution geared towards motion version | toolchain --------|---------- ``1.1.0`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenEXR.md b/docs/version-specific/supported-software/o/OpenEXR.md index 694a69d5a..6117ee2ac 100644 --- a/docs/version-specific/supported-software/o/OpenEXR.md +++ b/docs/version-specific/supported-software/o/OpenEXR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenEXR OpenEXR is a high dynamic-range (HDR) image file format developed by Industrial Light & Magic for use in computer imaging applications @@ -19,3 +23,6 @@ version | toolchain ``3.1.5`` | ``GCCcore/12.2.0`` ``3.1.7`` | ``GCCcore/12.3.0`` ``3.2.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenFAST.md b/docs/version-specific/supported-software/o/OpenFAST.md index f782ad377..55d75b95a 100644 --- a/docs/version-specific/supported-software/o/OpenFAST.md +++ b/docs/version-specific/supported-software/o/OpenFAST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenFAST OpenFAST is a wind turbine simulation tool which builds on FAST v8. FAST.Farm extends the capability of OpenFAST to simulate multi-turbine wind farms @@ -7,3 +11,6 @@ OpenFAST is a wind turbine simulation tool which builds on FAST v8. FAST.Farm ex version | toolchain --------|---------- ``3.0.0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenFOAM-Extend.md b/docs/version-specific/supported-software/o/OpenFOAM-Extend.md index 58f18c57e..3903b397a 100644 --- a/docs/version-specific/supported-software/o/OpenFOAM-Extend.md +++ b/docs/version-specific/supported-software/o/OpenFOAM-Extend.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenFOAM-Extend OpenFOAM is a free, open source CFD software package. OpenFOAM has an extensive range of features to solve anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to solid dynamics and electromagnetics. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``4.0`` | ``-Python-2.7.16`` | ``intel/2019b`` ``4.1-20191120`` | ``-Python-2.7.16`` | ``intel/2019b`` ``4.1-20200408`` | ``-Python-2.7.16`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenFOAM.md b/docs/version-specific/supported-software/o/OpenFOAM.md index aae15f250..4927ef036 100644 --- a/docs/version-specific/supported-software/o/OpenFOAM.md +++ b/docs/version-specific/supported-software/o/OpenFOAM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenFOAM OpenFOAM is a free, open source CFD software package. OpenFOAM has an extensive range of features to solve anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to solid dynamics and electromagnetics. @@ -66,3 +70,6 @@ version | versionsuffix | toolchain ``v2206`` | | ``foss/2022a`` ``v2306`` | | ``foss/2022b`` ``v2312`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenFace.md b/docs/version-specific/supported-software/o/OpenFace.md index c2d572be6..53a3d27dd 100644 --- a/docs/version-specific/supported-software/o/OpenFace.md +++ b/docs/version-specific/supported-software/o/OpenFace.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenFace OpenFace – a state-of-the art tool intended for facial landmark detection, head pose estimation, facial action unit recognition, and eye-gaze estimation. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.2.0`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``2.2.0`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenFold.md b/docs/version-specific/supported-software/o/OpenFold.md index f03ab0285..0c31a6a33 100644 --- a/docs/version-specific/supported-software/o/OpenFold.md +++ b/docs/version-specific/supported-software/o/OpenFold.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenFold A faithful PyTorch reproduction of DeepMind's AlphaFold 2 @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.0.0`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``1.0.1`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``1.0.1`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenForceField.md b/docs/version-specific/supported-software/o/OpenForceField.md index 83c3a525b..c7e570baf 100644 --- a/docs/version-specific/supported-software/o/OpenForceField.md +++ b/docs/version-specific/supported-software/o/OpenForceField.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenForceField Simulation and Parameter Estimation in Geophysics - A python package for simulation and gradient based parameter estimation in the context of geophysical applications. @@ -7,3 +11,6 @@ Simulation and Parameter Estimation in Geophysics - A python package for simula version | versionsuffix | toolchain --------|---------------|---------- ``0.7.0`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenImageIO.md b/docs/version-specific/supported-software/o/OpenImageIO.md index 99a32cda0..f5ee1997d 100644 --- a/docs/version-specific/supported-software/o/OpenImageIO.md +++ b/docs/version-specific/supported-software/o/OpenImageIO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenImageIO OpenImageIO is a library for reading and writing images, and a bunch of related classes, utilities, and applications. @@ -16,3 +20,6 @@ version | toolchain ``2.1.12.0`` | ``iimpi/2020a`` ``2.3.17.0`` | ``GCC/11.3.0`` ``2.4.14.0`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenJPEG.md b/docs/version-specific/supported-software/o/OpenJPEG.md index 19801c727..a449ea198 100644 --- a/docs/version-specific/supported-software/o/OpenJPEG.md +++ b/docs/version-specific/supported-software/o/OpenJPEG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenJPEG OpenJPEG is an open-source JPEG 2000 codec written in C language. It has been developed in order to promote the use of JPEG 2000, a still-image compression standard from the Joint Photographic Experts Group (JPEG). Since may 2015, it is officially recognized by ISO/IEC and ITU-T as a JPEG 2000 Reference Software. @@ -19,3 +23,6 @@ version | toolchain ``2.5.0`` | ``GCCcore/12.2.0`` ``2.5.0`` | ``GCCcore/12.3.0`` ``2.5.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenKIM-API.md b/docs/version-specific/supported-software/o/OpenKIM-API.md index c237ccefe..6c0ded41e 100644 --- a/docs/version-specific/supported-software/o/OpenKIM-API.md +++ b/docs/version-specific/supported-software/o/OpenKIM-API.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenKIM-API Open Knowledgebase of Interatomic Models. OpenKIM is an API and a collection of interatomic models (potentials) for atomistic simulations. It is a library that can be used by simulation programs to get access to the models in the OpenKIM database. This EasyBuild only installs the API, the models have to be installed by the user by running kim-api-collections-management install user MODELNAME or kim-api-collections-management install user OpenKIM to install them all. @@ -11,3 +15,6 @@ version | toolchain ``1.9.7`` | ``foss/2018b`` ``1.9.7`` | ``intel/2018b`` ``1.9.7`` | ``iomkl/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenMEEG.md b/docs/version-specific/supported-software/o/OpenMEEG.md index 51a71646a..467f8a433 100644 --- a/docs/version-specific/supported-software/o/OpenMEEG.md +++ b/docs/version-specific/supported-software/o/OpenMEEG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenMEEG The OpenMEEG software is a C++ package for solving the forward problems of electroencephalography (EEG) and magnetoencephalography (MEG). @@ -7,3 +11,6 @@ The OpenMEEG software is a C++ package for solving the forward problems of elect version | toolchain --------|---------- ``2.5.7`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenMM-PLUMED.md b/docs/version-specific/supported-software/o/OpenMM-PLUMED.md index f4aaace18..d2746f3e2 100644 --- a/docs/version-specific/supported-software/o/OpenMM-PLUMED.md +++ b/docs/version-specific/supported-software/o/OpenMM-PLUMED.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenMM-PLUMED This project provides a connection between OpenMM and PLUMED. It allows you to bias or analyze an OpenMM simulation based on collective variables. @@ -7,3 +11,6 @@ This project provides a connection between OpenMM and PLUMED. It allows you to b version | versionsuffix | toolchain --------|---------------|---------- ``1.0`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenMM.md b/docs/version-specific/supported-software/o/OpenMM.md index 0683536c2..464853fc0 100644 --- a/docs/version-specific/supported-software/o/OpenMM.md +++ b/docs/version-specific/supported-software/o/OpenMM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenMM OpenMM is a toolkit for molecular simulation. @@ -29,3 +33,6 @@ version | versionsuffix | toolchain ``8.0.0`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``8.0.0`` | | ``foss/2022a`` ``8.0.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenMMTools.md b/docs/version-specific/supported-software/o/OpenMMTools.md index 08add2d03..0be7e890d 100644 --- a/docs/version-specific/supported-software/o/OpenMMTools.md +++ b/docs/version-specific/supported-software/o/OpenMMTools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenMMTools A batteries-included toolkit for the GPU-accelerated OpenMM molecular simulation engine. openmmtools is a Python library layer that sits on top of OpenMM to provide access to a variety of useful tools for building full-featured molecular simulation packages. @@ -7,3 +11,6 @@ A batteries-included toolkit for the GPU-accelerated OpenMM molecular simulation version | versionsuffix | toolchain --------|---------------|---------- ``0.20.0`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenMPI.md b/docs/version-specific/supported-software/o/OpenMPI.md index 392afd363..6622749ea 100644 --- a/docs/version-specific/supported-software/o/OpenMPI.md +++ b/docs/version-specific/supported-software/o/OpenMPI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenMPI The Open MPI Project is an open source MPI-2 implementation. @@ -88,3 +92,6 @@ version | versionsuffix | toolchain ``4.1.6`` | | ``GCC/13.2.0`` ``5.0.3`` | | ``GCC/13.3.0`` ``system`` | | ``GCC/system-2.29`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenMS.md b/docs/version-specific/supported-software/o/OpenMS.md index 07d006a46..44ee0460c 100644 --- a/docs/version-specific/supported-software/o/OpenMS.md +++ b/docs/version-specific/supported-software/o/OpenMS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenMS As part of the deNBI Center for integrative Bioinformatics, OpenMS offers an open-source software C++ library (+ python bindings) for LC/MS data management and analyses. It provides an infrastructure for the rapid development of mass spectrometry related software as well as a rich toolset built on top of it. @@ -7,3 +11,6 @@ As part of the deNBI Center for integrative Bioinformatics, OpenMS offers an ope version | toolchain --------|---------- ``2.4.0`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenMolcas.md b/docs/version-specific/supported-software/o/OpenMolcas.md index 1115f0f6c..d4efec3af 100644 --- a/docs/version-specific/supported-software/o/OpenMolcas.md +++ b/docs/version-specific/supported-software/o/OpenMolcas.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenMolcas OpenMolcas is a quantum chemistry software package @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``22.10`` | ``-noGA`` | ``intel/2022a`` ``22.10`` | | ``intel/2022a`` ``23.06`` | | ``intel/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenNLP.md b/docs/version-specific/supported-software/o/OpenNLP.md index 50481f558..577dcc3f7 100644 --- a/docs/version-specific/supported-software/o/OpenNLP.md +++ b/docs/version-specific/supported-software/o/OpenNLP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenNLP The Apache OpenNLP library is a machine learning based toolkit for the processing of natural language text. @@ -7,3 +11,6 @@ The Apache OpenNLP library is a machine learning based toolkit for the processin version | toolchain --------|---------- ``1.8.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenPGM.md b/docs/version-specific/supported-software/o/OpenPGM.md index 6dd7dfa06..442531a40 100644 --- a/docs/version-specific/supported-software/o/OpenPGM.md +++ b/docs/version-specific/supported-software/o/OpenPGM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenPGM OpenPGM is an open source implementation of the Pragmatic General Multicast (PGM) specification in RFC 3208 available at www.ietf.org. PGM is a reliable and scalable multicast protocol that enables receivers to detect loss, request retransmission of lost data, or notify an application of unrecoverable loss. PGM is a receiver-reliable protocol, which means the receiver is responsible for ensuring all data is received, absolving the sender of reception responsibility. @@ -24,3 +28,6 @@ version | toolchain ``5.2.122`` | ``intel/2016a`` ``5.2.122`` | ``intel/2016b`` ``5.2.122`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenPIV.md b/docs/version-specific/supported-software/o/OpenPIV.md index 94288f842..d5d21e6d3 100644 --- a/docs/version-specific/supported-software/o/OpenPIV.md +++ b/docs/version-specific/supported-software/o/OpenPIV.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenPIV OpenPIV is an open source Particle Image Velocimetry analysis software @@ -7,3 +11,6 @@ OpenPIV is an open source Particle Image Velocimetry analysis software version | versionsuffix | toolchain --------|---------------|---------- ``0.21.8`` | ``-Python-3.7.4`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenRefine.md b/docs/version-specific/supported-software/o/OpenRefine.md index 131e78c29..53aca375a 100644 --- a/docs/version-specific/supported-software/o/OpenRefine.md +++ b/docs/version-specific/supported-software/o/OpenRefine.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenRefine OpenRefine is a power tool that allows you to load data, understand it, clean it up, reconcile it, and augment it with data coming from the web. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.7`` | ``-Java-1.8.0_144`` | ``system`` ``3.4.1`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenSSL.md b/docs/version-specific/supported-software/o/OpenSSL.md index d27cfc3c9..a0e938b92 100644 --- a/docs/version-specific/supported-software/o/OpenSSL.md +++ b/docs/version-specific/supported-software/o/OpenSSL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenSSL The OpenSSL Project is a collaborative effort to develop a robust, commercial-grade, full-featured, and Open Source toolchain implementing the Secure Sockets Layer (SSL v2/v3) and Transport Layer Security (TLS v1) protocols as well as a full-strength general purpose cryptography library. @@ -28,3 +32,6 @@ version | toolchain ``1.1.1q`` | ``GCCcore/10.3.0`` ``1.1`` | ``system`` ``3`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenSceneGraph.md b/docs/version-specific/supported-software/o/OpenSceneGraph.md index 069e6896b..13136ddb2 100644 --- a/docs/version-specific/supported-software/o/OpenSceneGraph.md +++ b/docs/version-specific/supported-software/o/OpenSceneGraph.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenSceneGraph The OpenSceneGraph is an open source high performance 3D graphics toolkit, used by application developers in fields such as visual simulation, games, virtual reality, scientific visualization and modelling. Written entirely in Standard C++ and OpenGL it runs on all Windows platforms, OSX, GNU/Linux, IRIX, Solaris, HP-Ux, AIX and FreeBSD operating systems. The OpenSceneGraph is now well established as the world leading scene graph technology, used widely in the vis-sim, space, scientific, oil-gas, games and virtual reality industries. @@ -9,3 +13,6 @@ version | toolchain ``3.6.5`` | ``foss/2021a`` ``3.6.5`` | ``foss/2021b`` ``3.6.5`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenSees.md b/docs/version-specific/supported-software/o/OpenSees.md index 89149eb1f..e4cac7416 100644 --- a/docs/version-specific/supported-software/o/OpenSees.md +++ b/docs/version-specific/supported-software/o/OpenSees.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenSees Open System for Earthquake Engineering Simulation @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.2.0`` | ``-Python-3.8.2-parallel`` | ``intel/2020a`` ``3.2.0`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenSlide-Java.md b/docs/version-specific/supported-software/o/OpenSlide-Java.md index 7014844a8..e8d4fb403 100644 --- a/docs/version-specific/supported-software/o/OpenSlide-Java.md +++ b/docs/version-specific/supported-software/o/OpenSlide-Java.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenSlide-Java This is a Java binding to OpenSlide. @@ -7,3 +11,6 @@ This is a Java binding to OpenSlide. version | versionsuffix | toolchain --------|---------------|---------- ``0.12.4`` | ``-Java-17`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenSlide.md b/docs/version-specific/supported-software/o/OpenSlide.md index 4f273d069..59c555cb3 100644 --- a/docs/version-specific/supported-software/o/OpenSlide.md +++ b/docs/version-specific/supported-software/o/OpenSlide.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenSlide OpenSlide is a C library that provides a simple interface to read whole-slide images (also known as virtual slides). @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``3.4.1`` | ``-largefiles`` | ``GCCcore/12.3.0`` ``3.4.1`` | ``-largefiles`` | ``GCCcore/8.2.0`` ``3.4.1`` | | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OpenStackClient.md b/docs/version-specific/supported-software/o/OpenStackClient.md index 233748292..19ebe54ed 100644 --- a/docs/version-specific/supported-software/o/OpenStackClient.md +++ b/docs/version-specific/supported-software/o/OpenStackClient.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OpenStackClient OpenStackClient (aka OSC) is a command-line client for OpenStack that brings the command set for Compute, Identity, Image, Network, Object Store and Block Storage APIs together in a single shell with a uniform command structure. @@ -9,3 +13,6 @@ version | toolchain ``5.5.0`` | ``GCCcore/10.2.0`` ``5.8.0`` | ``GCCcore/11.2.0`` ``6.0.0`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OptaDOS.md b/docs/version-specific/supported-software/o/OptaDOS.md index a292e4e15..88eb4e7f7 100644 --- a/docs/version-specific/supported-software/o/OptaDOS.md +++ b/docs/version-specific/supported-software/o/OptaDOS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OptaDOS OptaDOS is a program for calculating core-electron and low-loss electron energy loss spectra (EELS) and optical spectra along with total-, projected- and joint-density of electronic states (DOS) from single-particle eigenenergies and dipole transition coefficients. @@ -7,3 +11,6 @@ OptaDOS is a program for calculating core-electron and low-loss electron energy version | toolchain --------|---------- ``1.2.380`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/Optax.md b/docs/version-specific/supported-software/o/Optax.md index 39bb14b19..895ab5f71 100644 --- a/docs/version-specific/supported-software/o/Optax.md +++ b/docs/version-specific/supported-software/o/Optax.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Optax Optax is a gradient processing and optimization library for JAX. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.1.7`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.1.7`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OptiType.md b/docs/version-specific/supported-software/o/OptiType.md index 9448b207a..5045e10cc 100644 --- a/docs/version-specific/supported-software/o/OptiType.md +++ b/docs/version-specific/supported-software/o/OptiType.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OptiType OptiType is a novel HLA genotyping algorithm based on integer linear programming, capable of producing accurate 4-digit HLA genotyping predictions from NGS data by simultaneously selecting all major and minor HLA Class I alleles. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.3.2`` | ``-Python-2.7.15`` | ``foss/2018b`` ``1.3.2`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OptiX.md b/docs/version-specific/supported-software/o/OptiX.md index cfc490f97..0216edb44 100644 --- a/docs/version-specific/supported-software/o/OptiX.md +++ b/docs/version-specific/supported-software/o/OptiX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OptiX OptiX is NVIDIA SDK for easy ray tracing performance. It provides a simple framework for accessing the GPU’s massive ray tracing power using state-of-the-art GPU algorithms. @@ -10,3 +14,6 @@ version | toolchain ``3.9.0`` | ``GNU/4.9.3-2.25`` ``6.5.0`` | ``system`` ``7.2.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/Optuna.md b/docs/version-specific/supported-software/o/Optuna.md index e19b0e128..2d4d4454a 100644 --- a/docs/version-specific/supported-software/o/Optuna.md +++ b/docs/version-specific/supported-software/o/Optuna.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Optuna Optuna is an automatic hyperparameter optimization software framework, particularly designed for machine learning. It features an imperative, define-by-run style user API. Thanks to our define-by-run API, the code written with Optuna enjoys high modularity, and the user of Optuna can dynamically construct the search spaces for the hyperparameters. @@ -10,3 +14,6 @@ version | toolchain ``2.9.1`` | ``foss/2021a`` ``3.1.0`` | ``foss/2022a`` ``3.5.0`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OrfM.md b/docs/version-specific/supported-software/o/OrfM.md index 6ef709429..ef8f7d137 100644 --- a/docs/version-specific/supported-software/o/OrfM.md +++ b/docs/version-specific/supported-software/o/OrfM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OrfM A simple and not slow open reading frame (ORF) caller. No bells or whistles like frameshift detection, just a straightforward goal of returning a FASTA file of open reading frames over a certain length from a FASTA/Q file of nucleotide sequences. @@ -9,3 +13,6 @@ version | toolchain ``0.6.1`` | ``foss/2016b`` ``0.7.1`` | ``GCC/12.3.0`` ``0.7.1`` | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OrthoFinder.md b/docs/version-specific/supported-software/o/OrthoFinder.md index 106dea804..d01897800 100644 --- a/docs/version-specific/supported-software/o/OrthoFinder.md +++ b/docs/version-specific/supported-software/o/OrthoFinder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OrthoFinder OrthoFinder is a fast, accurate and comprehensive platform for comparative genomics @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``2.5.2`` | | ``foss/2020b`` ``2.5.4`` | | ``foss/2020b`` ``2.5.5`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/OrthoMCL.md b/docs/version-specific/supported-software/o/OrthoMCL.md index 334ca8b86..f40160369 100644 --- a/docs/version-specific/supported-software/o/OrthoMCL.md +++ b/docs/version-specific/supported-software/o/OrthoMCL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # OrthoMCL OrthoMCL is a genome-scale algorithm for grouping orthologous protein sequences. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.4`` | ``-Perl-5.24.0`` | ``intel/2016b`` ``2.0.9`` | ``-Perl-5.24.0`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/Osi.md b/docs/version-specific/supported-software/o/Osi.md index 8bd043648..adeb79ed2 100644 --- a/docs/version-specific/supported-software/o/Osi.md +++ b/docs/version-specific/supported-software/o/Osi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Osi Osi (Open Solver Interface) provides an abstract base class to a generic linear programming (LP) solver, along with derived classes for specific solvers. Many applications may be able to use the Osi to insulate themselves from a specific LP solver. That is, programs written to the OSI standard may be linked to any solver with an OSI interface and should produce correct results. The OSI has been significantly extended compared to its first incarnation. Currently, the OSI supports linear programming solvers and has rudimentary support for integer programming. @@ -13,3 +17,6 @@ version | toolchain ``0.108.7`` | ``GCC/11.2.0`` ``0.108.8`` | ``GCC/12.2.0`` ``0.108.9`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/index.md b/docs/version-specific/supported-software/o/index.md index 1e39e5cd4..d90bd892d 100644 --- a/docs/version-specific/supported-software/o/index.md +++ b/docs/version-specific/supported-software/o/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (o) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - *o* - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [Oases](Oases.md) * [OBITools](OBITools.md) * [OBITools3](OBITools3.md) diff --git a/docs/version-specific/supported-software/o/ocamlbuild.md b/docs/version-specific/supported-software/o/ocamlbuild.md index 5bf75d19b..5b76246d8 100644 --- a/docs/version-specific/supported-software/o/ocamlbuild.md +++ b/docs/version-specific/supported-software/o/ocamlbuild.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ocamlbuild OCamlbuild is a generic build tool, that has built-in rules for building OCaml library and programs. @@ -7,3 +11,6 @@ OCamlbuild is a generic build tool, that has built-in rules for building OCaml version | toolchain --------|---------- ``0.14.3`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/occt.md b/docs/version-specific/supported-software/o/occt.md index 7e6e4f26c..f06b2d956 100644 --- a/docs/version-specific/supported-software/o/occt.md +++ b/docs/version-specific/supported-software/o/occt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # occt Open CASCADE Technology (OCCT) is an object-oriented C++ class library designed for rapid production of sophisticated domain-specific CAD/CAM/CAE applications. @@ -10,3 +14,6 @@ version | toolchain ``7.5.0p1`` | ``foss/2021a`` ``7.5.0p1`` | ``foss/2022a`` ``7.8.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/oceanspy.md b/docs/version-specific/supported-software/o/oceanspy.md index b6cbba39d..b3c4a4e8b 100644 --- a/docs/version-specific/supported-software/o/oceanspy.md +++ b/docs/version-specific/supported-software/o/oceanspy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # oceanspy OceanSpy - A Python package to facilitate ocean model data analysis and visualization. @@ -7,3 +11,6 @@ OceanSpy - A Python package to facilitate ocean model data analysis and visuali version | toolchain --------|---------- ``0.2.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/olaFlow.md b/docs/version-specific/supported-software/o/olaFlow.md index 2bca5ebb3..5d5762d0c 100644 --- a/docs/version-specific/supported-software/o/olaFlow.md +++ b/docs/version-specific/supported-software/o/olaFlow.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # olaFlow olaFlow CFD Suite is a free and open source project committed to bringing the latest advances for the simulation of wave dynamics to the OpenFOAM® and FOAM-extend communities. @@ -7,3 +11,6 @@ olaFlow CFD Suite is a free and open source project committed to bringing the la version | toolchain --------|---------- ``20210820`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/olego.md b/docs/version-specific/supported-software/o/olego.md index c1d724be4..039ccc61f 100644 --- a/docs/version-specific/supported-software/o/olego.md +++ b/docs/version-specific/supported-software/o/olego.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # olego OLego is a program specifically designed for de novo spliced mapping of mRNA-seq reads. OLego adopts a seed-and-extend scheme, and does not rely on a separate external mapper. @@ -7,3 +11,6 @@ OLego is a program specifically designed for de novo spliced mapping of mRNA-seq version | toolchain --------|---------- ``1.1.9`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/onedrive.md b/docs/version-specific/supported-software/o/onedrive.md index 1a976a5d6..a53e6764b 100644 --- a/docs/version-specific/supported-software/o/onedrive.md +++ b/docs/version-specific/supported-software/o/onedrive.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # onedrive A free Microsoft OneDrive Client which supports OneDrive Personal, OneDrive for Business, OneDrive for Office365 and SharePoint. @@ -9,3 +13,6 @@ version | toolchain ``2.4.11`` | ``GCCcore/10.2.0`` ``2.4.21`` | ``GCCcore/11.3.0`` ``2.4.25`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/ont-fast5-api.md b/docs/version-specific/supported-software/o/ont-fast5-api.md index cc03b31e5..4b56f7614 100644 --- a/docs/version-specific/supported-software/o/ont-fast5-api.md +++ b/docs/version-specific/supported-software/o/ont-fast5-api.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ont-fast5-api ont_fast5_api is a simple interface to HDF5 files of the Oxford Nanopore .fast5 file format. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``4.1.1`` | | ``foss/2022a`` ``4.1.1`` | | ``foss/2022b`` ``4.1.2`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/ont-guppy.md b/docs/version-specific/supported-software/o/ont-guppy.md index 428a6fed5..aa3be4707 100644 --- a/docs/version-specific/supported-software/o/ont-guppy.md +++ b/docs/version-specific/supported-software/o/ont-guppy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ont-guppy Guppy is a bioinformatics toolkit that enables real-time basecalling and several post-processing features that works on Oxford Nanopore Technologies™ sequencing platforms. For Research Use Only @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``6.4.6`` | ``-CUDA-11.7.0`` | ``system`` ``6.4.6`` | | ``system`` ``6.4.8`` | ``-CUDA-11.7.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/ont-remora.md b/docs/version-specific/supported-software/o/ont-remora.md index 397bb39ed..c2564643b 100644 --- a/docs/version-specific/supported-software/o/ont-remora.md +++ b/docs/version-specific/supported-software/o/ont-remora.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ont-remora Methylation/modified base calling separated from basecalling. Remora primarily provides an API to call modified bases for basecaller programs such as Bonito. Remora also provides the tools to prepare datasets, train modified base models and run simple inference. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.1.2`` | | ``foss/2021a`` ``1.0.0`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``1.0.0`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/openCARP.md b/docs/version-specific/supported-software/o/openCARP.md index 4a9596de7..566c27809 100644 --- a/docs/version-specific/supported-software/o/openCARP.md +++ b/docs/version-specific/supported-software/o/openCARP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # openCARP openCARP is an open cardiac electrophysiology simulator for in-silico experiments. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``3.2`` | ``-Python-3.8.2`` | ``foss/2020a`` ``6.0`` | | ``foss/2020b`` ``8.2`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/openkim-models.md b/docs/version-specific/supported-software/o/openkim-models.md index fd0a1da29..a47b92fe5 100644 --- a/docs/version-specific/supported-software/o/openkim-models.md +++ b/docs/version-specific/supported-software/o/openkim-models.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # openkim-models Open Knowledgebase of Interatomic Models. OpenKIM is an API and a collection of interatomic models (potentials) for atomistic simulations. It is a library that can be used by simulation programs to get access to the models in the OpenKIM database. This EasyBuild installs the models. The API itself is in the kim-api package. @@ -14,3 +18,6 @@ version | toolchain ``20210128`` | ``GCC/10.2.0`` ``20210811`` | ``GCC/12.3.0`` ``20210811`` | ``intel-compilers/2023.1.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/openpyxl.md b/docs/version-specific/supported-software/o/openpyxl.md index c14c7bb17..53862c07a 100644 --- a/docs/version-specific/supported-software/o/openpyxl.md +++ b/docs/version-specific/supported-software/o/openpyxl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # openpyxl A Python library to read/write Excel 2010 xlsx/xlsm files @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``3.1.2`` | | ``GCCcore/12.2.0`` ``3.1.2`` | | ``GCCcore/12.3.0`` ``3.1.2`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/openslide-python.md b/docs/version-specific/supported-software/o/openslide-python.md index 0299ac7b6..2eaa65703 100644 --- a/docs/version-specific/supported-software/o/openslide-python.md +++ b/docs/version-specific/supported-software/o/openslide-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # openslide-python OpenSlide Python is a Python interface to the OpenSlide library. @@ -11,3 +15,6 @@ version | toolchain ``1.1.2`` | ``GCCcore/11.2.0`` ``1.2.0`` | ``GCCcore/11.3.0`` ``1.3.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/optiSLang.md b/docs/version-specific/supported-software/o/optiSLang.md index 102878d84..b9ad4ed9d 100644 --- a/docs/version-specific/supported-software/o/optiSLang.md +++ b/docs/version-specific/supported-software/o/optiSLang.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # optiSLang Ansys optiSLang is a constantly evolving, leading-edge answer to the challenges posed by CAE-based Robust Design Optimization (RDO). Its state-of-the-art algorithms efficiently and automatically search for the most robust design configuration, eliminating the slow, manual process that used to define RDO. @@ -7,3 +11,6 @@ Ansys optiSLang is a constantly evolving, leading-edge answer to the challenges version | toolchain --------|---------- ``2024R1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/orthAgogue.md b/docs/version-specific/supported-software/o/orthAgogue.md index 54bbb041b..12391d646 100644 --- a/docs/version-specific/supported-software/o/orthAgogue.md +++ b/docs/version-specific/supported-software/o/orthAgogue.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # orthAgogue orthAgogue: a tool for high speed estimation of homology relations within and between species in massive data sets. orthAgogue is easy to use and offers flexibility through a range of optional parameters. @@ -7,3 +11,6 @@ orthAgogue: a tool for high speed estimation of homology relations within and be version | toolchain --------|---------- ``20141105`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/ownCloud.md b/docs/version-specific/supported-software/o/ownCloud.md index 793c556f7..ee8c6f4a9 100644 --- a/docs/version-specific/supported-software/o/ownCloud.md +++ b/docs/version-specific/supported-software/o/ownCloud.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ownCloud The ownCloud Desktop Client is a tool to synchronize files from ownCloud Server with your computer. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.4.3`` | ``foss/2018b`` ``2.5.4`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/oxDNA.md b/docs/version-specific/supported-software/o/oxDNA.md index d694b7717..447b165cf 100644 --- a/docs/version-specific/supported-software/o/oxDNA.md +++ b/docs/version-specific/supported-software/o/oxDNA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # oxDNA oxDNA is a simulation code that was initially conceived as an implementation of the coarse-grained DNA model introduced by T. E. Ouldridge, J. P. K. Doye and A. A. Louis. It has been since reworked and it is now an extensible simulation+analysis framework. It natively supports DNA, RNA, Lennard-Jones and patchy particle simulations of different kinds on both single CPU cores and NVIDIA GPUs. @@ -7,3 +11,6 @@ oxDNA is a simulation code that was initially conceived as an implementation of version | versionsuffix | toolchain --------|---------------|---------- ``3.5.2`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/o/oxford_asl.md b/docs/version-specific/supported-software/o/oxford_asl.md index d7293cb78..b2f2a6330 100644 --- a/docs/version-specific/supported-software/o/oxford_asl.md +++ b/docs/version-specific/supported-software/o/oxford_asl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # oxford_asl A command line tool for quantification of perfusion from ASL data @@ -7,3 +11,6 @@ A command line tool for quantification of perfusion from ASL data version | versionsuffix | toolchain --------|---------------|---------- ``3.9.6`` | ``-centos7-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PAGAN2.md b/docs/version-specific/supported-software/p/PAGAN2.md index 57ba2a90a..d39f5ca3a 100644 --- a/docs/version-specific/supported-software/p/PAGAN2.md +++ b/docs/version-specific/supported-software/p/PAGAN2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PAGAN2 PAGAN2 is a general-purpose method for the alignment of DNA, codon and amino-acid sequences as graphs. It aligns sequences either with pileup or, when related by a tree, using phylogeny-aware progressive alignment algorithm. In both cases it uses graphs to describe the uncertainty in the presence of characters at certain sequence positions. PAGAN2 is largely compatible with PAGAN but implements new algorithms for alignment anchoring and memory handling. As a result, PAGAN2 can align sequences of several hundreds of kilobases in length. @@ -7,3 +11,6 @@ PAGAN2 is a general-purpose method for the alignment of DNA, codon and amino-aci version | versionsuffix | toolchain --------|---------------|---------- ``1.53_20230824`` | ``-linux64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PAL2NAL.md b/docs/version-specific/supported-software/p/PAL2NAL.md index 2029c12be..5febf5195 100644 --- a/docs/version-specific/supported-software/p/PAL2NAL.md +++ b/docs/version-specific/supported-software/p/PAL2NAL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PAL2NAL PAL2NAL is a program that converts a multiple sequence alignment of proteins and the corresponding DNA (or mRNA) sequences into a codon alignment. The program automatically assigns the corresponding codon sequence even if the input DNA sequence has mismatches with the input protein sequence, or contains UTRs, polyA tails. It can also deal with frame shifts in the input alignment, which is suitable for the analysis of pseudogenes. The resulting codon alignment can further be subjected to the calculation of synonymous (d_S) and non-synonymous (d_N) subs- titution rates. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``14`` | ``GCCcore/10.2.0`` ``14`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PALEOMIX.md b/docs/version-specific/supported-software/p/PALEOMIX.md index e042731f0..f16921a6d 100644 --- a/docs/version-specific/supported-software/p/PALEOMIX.md +++ b/docs/version-specific/supported-software/p/PALEOMIX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PALEOMIX The PALEOMIX pipelines are a set of pipelines and tools designed to aid the rapid processing of High-Throughput Sequencing (HTS) data. @@ -7,3 +11,6 @@ The PALEOMIX pipelines are a set of pipelines and tools designed to aid the rapi version | toolchain --------|---------- ``1.3.7`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PAML.md b/docs/version-specific/supported-software/p/PAML.md index fd90ab7ef..6b6243374 100644 --- a/docs/version-specific/supported-software/p/PAML.md +++ b/docs/version-specific/supported-software/p/PAML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PAML PAML is a package of programs for phylogenetic analyses of DNA or protein sequences using maximum likelihood. @@ -13,3 +17,6 @@ version | toolchain ``4.9j`` | ``GCCcore/10.3.0`` ``4.9j`` | ``GCCcore/11.2.0`` ``4.9j`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PANDAseq.md b/docs/version-specific/supported-software/p/PANDAseq.md index ed68b42a1..6200bf67b 100644 --- a/docs/version-specific/supported-software/p/PANDAseq.md +++ b/docs/version-specific/supported-software/p/PANDAseq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PANDAseq PANDASEQ is a program to align Illumina reads, optionally with PCR primers embedded in the sequence, and reconstruct an overlapping sequence. @@ -11,3 +15,6 @@ version | toolchain ``2.11`` | ``foss/2017b`` ``2.11`` | ``intel/2017b`` ``2.11`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PAPI.md b/docs/version-specific/supported-software/p/PAPI.md index a4b85857f..61a9d6401 100644 --- a/docs/version-specific/supported-software/p/PAPI.md +++ b/docs/version-specific/supported-software/p/PAPI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PAPI PAPI provides the tool designer and application engineer with a consistent interface and methodology for use of the performance counter hardware found in most major microprocessors. PAPI enables software engineers to see, in near real time, the relation between software performance and processor events. In addition Component PAPI provides access to a collection of components that expose performance measurement opportunites across the hardware and software stack. @@ -21,3 +25,6 @@ version | toolchain ``7.0.1`` | ``GCCcore/12.2.0`` ``7.0.1`` | ``GCCcore/12.3.0`` ``7.1.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PARI-GP.md b/docs/version-specific/supported-software/p/PARI-GP.md index c9282ccdb..14ddf2a9f 100644 --- a/docs/version-specific/supported-software/p/PARI-GP.md +++ b/docs/version-specific/supported-software/p/PARI-GP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PARI-GP PARI/GP is a widely used computer algebra system designed for fast computations in number theory (factorizations, algebraic number theory, elliptic curves...), but also contains a large number of other useful functions to compute with mathematical entities such as matrices, polynomials, power series, algebraic numbers etc., and a lot of transcendental functions. PARI is also available as a C library to allow for faster computations. @@ -9,3 +13,6 @@ version | toolchain ``2.15.4`` | ``GCCcore/11.3.0`` ``2.15.5`` | ``GCCcore/13.2.0`` ``2.7.6`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PASA.md b/docs/version-specific/supported-software/p/PASA.md index a0ac4f87f..2512a2144 100644 --- a/docs/version-specific/supported-software/p/PASA.md +++ b/docs/version-specific/supported-software/p/PASA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PASA PASA, acronym for Program to Assemble Spliced Alignments (and pronounced 'pass-uh'), is a eukaryotic genome annotation tool that exploits spliced alignments of expressed transcript sequences to automatically model gene structures, and to maintain gene structure annotation consistent with the most recently available experimental sequence data. PASA also identifies and classifies all splicing variations supported by the transcript alignments. @@ -7,3 +11,6 @@ PASA, acronym for Program to Assemble Spliced Alignments (and pronounced 'pass-u version | toolchain --------|---------- ``2.5.3`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PAUP.md b/docs/version-specific/supported-software/p/PAUP.md index f33e4af5a..109c06af8 100644 --- a/docs/version-specific/supported-software/p/PAUP.md +++ b/docs/version-specific/supported-software/p/PAUP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PAUP PAUP* (Phylogenetic Analysis Using Parsimony *and other methods) is a computational phylogenetics program for inferring evolutionary trees. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``4.0a166`` | ``-centos64`` | ``system`` ``4.0a168`` | ``-centos64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PBSuite.md b/docs/version-specific/supported-software/p/PBSuite.md index 0a1493602..732f20923 100644 --- a/docs/version-specific/supported-software/p/PBSuite.md +++ b/docs/version-specific/supported-software/p/PBSuite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PBSuite PBJelly is a highly automated pipeline that aligns long sequencing reads (such as PacBio RS reads or long 454 reads in fasta format) to high-confidence draft assembles. @@ -7,3 +11,6 @@ PBJelly is a highly automated pipeline that aligns long sequencing reads (such a version | versionsuffix | toolchain --------|---------------|---------- ``15.8.24`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PBZIP2.md b/docs/version-specific/supported-software/p/PBZIP2.md index 79ace3359..3467117cd 100644 --- a/docs/version-specific/supported-software/p/PBZIP2.md +++ b/docs/version-specific/supported-software/p/PBZIP2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PBZIP2 PBZIP2 is a parallel implementation of the bzip2 block-sorting file compressor that uses pthreads and achieves near-linear speedup on SMP machines. The output of this version is fully compatible with bzip2 v1.0.2 or newer (ie: anything compressed with pbzip2 can be decompressed with bzip2). PBZIP2 should work on any system that has a pthreads compatible C++ compiler (such as gcc). It has been tested on: Linux, Windows (cygwin & MinGW), Solaris, Tru64/OSF1, HP-UX, OS/2, OSX, and Irix. @@ -7,3 +11,6 @@ PBZIP2 is a parallel implementation of the bzip2 block-sorting file compressor version | toolchain --------|---------- ``1.1.13`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PCAngsd.md b/docs/version-specific/supported-software/p/PCAngsd.md index b2e998a14..b2fa74db1 100644 --- a/docs/version-specific/supported-software/p/PCAngsd.md +++ b/docs/version-specific/supported-software/p/PCAngsd.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PCAngsd PCAngsd, which estimates the covariance matrix for low depth NGS data in an iterative procedure based on genotype likelihoods and is able to perform multiple population genetic analyses in heterogeneous populations. @@ -7,3 +11,6 @@ PCAngsd, which estimates the covariance matrix for low depth NGS data in an ite version | versionsuffix | toolchain --------|---------------|---------- ``0.97`` | ``-Python-2.7.14`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PCC.md b/docs/version-specific/supported-software/p/PCC.md index d694204e4..5e3982a50 100644 --- a/docs/version-specific/supported-software/p/PCC.md +++ b/docs/version-specific/supported-software/p/PCC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PCC The compiler is based on the original Portable C Compiler by S. C. Johnson, written in the late 70's. About 50% of the frontend code and 80% of the backend code has been modified. @@ -7,3 +11,6 @@ The compiler is based on the original Portable C Compiler by S. C. Johnson, wri version | toolchain --------|---------- ``20131024`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PCL.md b/docs/version-specific/supported-software/p/PCL.md index efc82eddf..65c9a4658 100644 --- a/docs/version-specific/supported-software/p/PCL.md +++ b/docs/version-specific/supported-software/p/PCL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PCL The Point Cloud Library (PCL) is a standalone, large scale, open project for 2D/3D image and point cloud processing. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.7.2`` | ``-Python-2.7.11`` | ``intel/2016a`` ``1.8.1`` | ``-Python-2.7.14`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PCMSolver.md b/docs/version-specific/supported-software/p/PCMSolver.md index e4b909e2e..1c1d5a20f 100644 --- a/docs/version-specific/supported-software/p/PCMSolver.md +++ b/docs/version-specific/supported-software/p/PCMSolver.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PCMSolver An API for the Polarizable Continuum Model. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``1.2.3`` | ``-Python-3.7.4`` | ``iimpi/2019b`` ``1.2.3`` | | ``iimpi/2020b`` ``20160205`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PCRE.md b/docs/version-specific/supported-software/p/PCRE.md index e3c2a2c0f..f82c5c092 100644 --- a/docs/version-specific/supported-software/p/PCRE.md +++ b/docs/version-specific/supported-software/p/PCRE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PCRE The PCRE library is a set of functions that implement regular expression pattern matching using the same syntax and semantics as Perl 5. @@ -32,3 +36,6 @@ version | toolchain ``8.45`` | ``GCCcore/12.2.0`` ``8.45`` | ``GCCcore/12.3.0`` ``8.45`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PCRE2.md b/docs/version-specific/supported-software/p/PCRE2.md index 1af9495e2..b0f4aa426 100644 --- a/docs/version-specific/supported-software/p/PCRE2.md +++ b/docs/version-specific/supported-software/p/PCRE2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PCRE2 The PCRE library is a set of functions that implement regular expression pattern matching using the same syntax and semantics as Perl 5. @@ -19,3 +23,6 @@ version | toolchain ``10.42`` | ``GCCcore/12.3.0`` ``10.42`` | ``GCCcore/13.2.0`` ``10.43`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PCRaster.md b/docs/version-specific/supported-software/p/PCRaster.md index a2106dfd4..c64631b71 100644 --- a/docs/version-specific/supported-software/p/PCRaster.md +++ b/docs/version-specific/supported-software/p/PCRaster.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PCRaster PCRaster Is a collection of software targeted at the development and deployment of spatio-temporal environmental models. @@ -7,3 +11,6 @@ PCRaster Is a collection of software targeted at the development and deployment version | versionsuffix | toolchain --------|---------------|---------- ``4.1.0`` | ``-Python-2.7.14`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PDM.md b/docs/version-specific/supported-software/p/PDM.md index 654cea859..d5f6349ba 100644 --- a/docs/version-specific/supported-software/p/PDM.md +++ b/docs/version-specific/supported-software/p/PDM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PDM A modern Python package and dependency manager supporting the latest PEP standards. @@ -7,3 +11,6 @@ A modern Python package and dependency manager supporting the latest PEP standar version | toolchain --------|---------- ``2.12.4`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PDT.md b/docs/version-specific/supported-software/p/PDT.md index 55607c919..29a63fe6d 100644 --- a/docs/version-specific/supported-software/p/PDT.md +++ b/docs/version-specific/supported-software/p/PDT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PDT Program Database Toolkit (PDT) is a framework for analyzing source code written in several programming languages and for making rich program knowledge accessible to developers of static and dynamic analysis tools. PDT implements a standard program representation, the program database (PDB), that can be accessed in a uniform way through a class library supporting common PDB operations. @@ -17,3 +21,6 @@ version | toolchain ``3.25.1`` | ``GCCcore/12.3.0`` ``3.25.1`` | ``GCCcore/9.3.0`` ``3.25.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PEAR.md b/docs/version-specific/supported-software/p/PEAR.md index c31381c6d..3268a6d98 100644 --- a/docs/version-specific/supported-software/p/PEAR.md +++ b/docs/version-specific/supported-software/p/PEAR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PEAR PEAR is an ultrafast, memory-efficient and highly accurate pair-end read merger. It is fully parallelized and can run with as low as just a few kilobytes of memory. @@ -16,3 +20,6 @@ version | toolchain ``0.9.11`` | ``foss/2018a`` ``0.9.8`` | ``foss/2016b`` ``0.9.8`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PEPT.md b/docs/version-specific/supported-software/p/PEPT.md index 9ec381ea4..0694c5278 100644 --- a/docs/version-specific/supported-software/p/PEPT.md +++ b/docs/version-specific/supported-software/p/PEPT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PEPT A Python library that integrates all the tools necessary to perform research using Positron Emission Particle Tracking (PEPT). The library includes algorithms for the location, identification and tracking of particles, in addition to tools for visualisation and analysis, and utilities allowing the realistic simulation of PEPT data. @@ -7,3 +11,6 @@ A Python library that integrates all the tools necessary to perform research usi version | toolchain --------|---------- ``0.4.1`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PEST++.md b/docs/version-specific/supported-software/p/PEST++.md index c0e9b0f19..1d1499bc8 100644 --- a/docs/version-specific/supported-software/p/PEST++.md +++ b/docs/version-specific/supported-software/p/PEST++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PEST++ PEST++ is a software suite aimed at supporting complex numerical models in the decision-support context. Much focus has been devoted to supporting environmental models (groundwater, surface water, etc) but these tools are readily applicable to any computer model. @@ -7,3 +11,6 @@ PEST++ is a software suite aimed at supporting complex numerical models in the version | toolchain --------|---------- ``5.0.5`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PETSc.md b/docs/version-specific/supported-software/p/PETSc.md index 85a7a0ca1..9131cfa86 100644 --- a/docs/version-specific/supported-software/p/PETSc.md +++ b/docs/version-specific/supported-software/p/PETSc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PETSc PETSc, pronounced PET-see (the S is silent), is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. @@ -29,3 +33,6 @@ version | versionsuffix | toolchain ``3.9.1`` | ``-downloaded-deps`` | ``foss/2018a`` ``3.9.3`` | | ``foss/2018a`` ``3.9.3`` | | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PFFT.md b/docs/version-specific/supported-software/p/PFFT.md index 973d6ba69..439faa46e 100644 --- a/docs/version-specific/supported-software/p/PFFT.md +++ b/docs/version-specific/supported-software/p/PFFT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PFFT PFFT is a software library for computing massively parallel, fast Fourier transformations on distributed memory architectures. PFFT can be understood as a generalization of FFTW-MPI to multidimensional data decomposition. The library is written in C and MPI. A Fortran interface is also available. Support for hybrid parallelization based on OpenMP and MPI is under development. @@ -7,3 +11,6 @@ PFFT is a software library for computing massively parallel, fast Fourier transf version | toolchain --------|---------- ``20181230`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PGDSpider.md b/docs/version-specific/supported-software/p/PGDSpider.md index 4cec5dd31..1f1b1c4fc 100644 --- a/docs/version-specific/supported-software/p/PGDSpider.md +++ b/docs/version-specific/supported-software/p/PGDSpider.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PGDSpider An automated data conversion tool for connecting population genetics and genomics programs @@ -7,3 +11,6 @@ An automated data conversion tool for connecting population genetics and genomic version | versionsuffix | toolchain --------|---------------|---------- ``2.1.0.3`` | ``-Java-1.7.0_80`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PGI.md b/docs/version-specific/supported-software/p/PGI.md index e45cae219..642141216 100644 --- a/docs/version-specific/supported-software/p/PGI.md +++ b/docs/version-specific/supported-software/p/PGI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PGI C, C++ and Fortran compilers from The Portland Group - PGI @@ -26,3 +30,6 @@ version | versionsuffix | toolchain ``19.10`` | ``-GCC-8.3.0-2.32`` | ``system`` ``19.4`` | ``-GCC-8.2.0-2.31.1`` | ``system`` ``19.7`` | ``-GCC-8.3.0-2.32`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PGPLOT.md b/docs/version-specific/supported-software/p/PGPLOT.md index b51f82187..9a4096794 100644 --- a/docs/version-specific/supported-software/p/PGPLOT.md +++ b/docs/version-specific/supported-software/p/PGPLOT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PGPLOT The PGPLOT Graphics Subroutine Library is a Fortran- or C-callable, device-independent graphics package for making simple scientific graphs. It is intended for making graphical images of publication quality with minimum effort on the part of the user. For most applications, the program can be device-independent, and the output can be directed to the appropriate device at run time. @@ -9,3 +13,6 @@ version | toolchain ``5.2.2`` | ``GCCcore/11.2.0`` ``5.2.2`` | ``GCCcore/11.3.0`` ``5.2.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PHANOTATE.md b/docs/version-specific/supported-software/p/PHANOTATE.md index 38969f652..d0b9a4d50 100644 --- a/docs/version-specific/supported-software/p/PHANOTATE.md +++ b/docs/version-specific/supported-software/p/PHANOTATE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PHANOTATE PHANOTATE: a tool to annotate phage genomes @@ -7,3 +11,6 @@ PHANOTATE: a tool to annotate phage genomes version | toolchain --------|---------- ``20190724`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PHASE.md b/docs/version-specific/supported-software/p/PHASE.md index 43859007b..cc315b06b 100644 --- a/docs/version-specific/supported-software/p/PHASE.md +++ b/docs/version-specific/supported-software/p/PHASE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PHASE The program PHASE implements a Bayesian statistical method for reconstructing haplotypes from population genotype data. Documentation: http://stephenslab.uchicago.edu/assets/software/phase/instruct2.1.pdf @@ -7,3 +11,6 @@ The program PHASE implements a Bayesian statistical method for reconstructing h version | toolchain --------|---------- ``2.1.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PHAST.md b/docs/version-specific/supported-software/p/PHAST.md index ea12e40fc..cd37661cb 100644 --- a/docs/version-specific/supported-software/p/PHAST.md +++ b/docs/version-specific/supported-software/p/PHAST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PHAST PHAST is a freely available software package for comparative and evolutionary genomics. @@ -9,3 +13,6 @@ version | toolchain ``1.4`` | ``intel/2017a`` ``1.5`` | ``GCC/6.4.0-2.28`` ``1.5`` | ``iccifort/2017.4.196-GCC-6.4.0-2.28`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PHLAT.md b/docs/version-specific/supported-software/p/PHLAT.md index beaede2af..d1978bc6c 100644 --- a/docs/version-specific/supported-software/p/PHLAT.md +++ b/docs/version-specific/supported-software/p/PHLAT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PHLAT PHLAT is a bioinformatics algorithm that offers HLA typing at four-digit resolution (or higher) using genome-wide transcriptome and exome sequencing data over a wide range of read lengths and sequencing depths. @@ -7,3 +11,6 @@ PHLAT is a bioinformatics algorithm that offers HLA typing at four-digit resolut version | versionsuffix | toolchain --------|---------------|---------- ``1.1`` | ``-Python-2.7.15`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PHYLIP.md b/docs/version-specific/supported-software/p/PHYLIP.md index 5563cfdda..c37925890 100644 --- a/docs/version-specific/supported-software/p/PHYLIP.md +++ b/docs/version-specific/supported-software/p/PHYLIP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PHYLIP PHYLIP is a free package of programs for inferring phylogenies. @@ -12,3 +16,6 @@ version | toolchain ``3.697`` | ``GCC/6.4.0-2.28`` ``3.697`` | ``GCC/9.3.0`` ``3.697`` | ``iccifort/2017.4.196-GCC-6.4.0-2.28`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PICI-LIGGGHTS.md b/docs/version-specific/supported-software/p/PICI-LIGGGHTS.md index 28a38404d..6cceeec66 100644 --- a/docs/version-specific/supported-software/p/PICI-LIGGGHTS.md +++ b/docs/version-specific/supported-software/p/PICI-LIGGGHTS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PICI-LIGGGHTS UoB Positron Imaging Centre's Improved LIGGGHTS distribution with an emphasis on the Python interface. @@ -7,3 +11,6 @@ UoB Positron Imaging Centre's Improved LIGGGHTS distribution with an emphasis o version | toolchain --------|---------- ``3.8.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PICRUSt2.md b/docs/version-specific/supported-software/p/PICRUSt2.md index 38d0170de..19620aca0 100644 --- a/docs/version-specific/supported-software/p/PICRUSt2.md +++ b/docs/version-specific/supported-software/p/PICRUSt2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PICRUSt2 PICRUSt2 (Phylogenetic Investigation of Communities by Reconstruction of Unobserved States) is a software for predicting functional abundances based only on marker gene sequences. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.5.2`` | ``foss/2022a`` ``2.5.2`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PIL.md b/docs/version-specific/supported-software/p/PIL.md index 0b31e0446..a47c2a766 100644 --- a/docs/version-specific/supported-software/p/PIL.md +++ b/docs/version-specific/supported-software/p/PIL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PIL The Python Imaging Library (PIL) adds image processing capabilities to your Python interpreter. This library supports many file formats, and provides powerful image processing and graphics capabilities. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``1.1.7`` | ``-Python-2.7.11`` | ``intel/2016a`` ``1.1.7`` | ``-Python-2.7.12`` | ``intel/2016b`` ``1.1.7`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PIMS.md b/docs/version-specific/supported-software/p/PIMS.md index dc7f50584..ab25f9356 100644 --- a/docs/version-specific/supported-software/p/PIMS.md +++ b/docs/version-specific/supported-software/p/PIMS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PIMS PIMS is a lazy-loading interface to sequential data with numpy-like slicing. @@ -7,3 +11,6 @@ PIMS is a lazy-loading interface to sequential data with numpy-like slicing. version | versionsuffix | toolchain --------|---------------|---------- ``0.4.1`` | ``-Python-2.7.14`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PIPITS.md b/docs/version-specific/supported-software/p/PIPITS.md index 8dfcbb1c5..ab5fb33e9 100644 --- a/docs/version-specific/supported-software/p/PIPITS.md +++ b/docs/version-specific/supported-software/p/PIPITS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PIPITS An automated pipeline for analyses of fungal internal transcribed spacer (ITS) sequences from the Illumina sequencing platform. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.8`` | | ``foss/2021a`` ``3.0`` | | ``foss/2021a`` ``3.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PIRATE.md b/docs/version-specific/supported-software/p/PIRATE.md index 2ab383011..c1a980543 100644 --- a/docs/version-specific/supported-software/p/PIRATE.md +++ b/docs/version-specific/supported-software/p/PIRATE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PIRATE A toolbox for pangenome analysis and threshold evaluation. @@ -7,3 +11,6 @@ A toolbox for pangenome analysis and threshold evaluation. version | versionsuffix | toolchain --------|---------------|---------- ``1.0.5`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PLAMS.md b/docs/version-specific/supported-software/p/PLAMS.md index ae021e718..fda8bdfd8 100644 --- a/docs/version-specific/supported-software/p/PLAMS.md +++ b/docs/version-specific/supported-software/p/PLAMS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PLAMS The Python Library for Automating Molecular Simulation (PLAMS) is powerful and flexible Python tool interfaced to the Amsterdam Modeling Suite engines ADF, BAND, DFTB, MOPAC, ReaxFF, and UFF. @@ -7,3 +11,6 @@ The Python Library for Automating Molecular Simulation (PLAMS) is powerful and f version | toolchain --------|---------- ``1.5.1`` | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PLAST.md b/docs/version-specific/supported-software/p/PLAST.md index e4193c4df..282d3c673 100644 --- a/docs/version-specific/supported-software/p/PLAST.md +++ b/docs/version-specific/supported-software/p/PLAST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PLAST PLAST is a parallel alignment search tool for comparing large protein banks @@ -7,3 +11,6 @@ PLAST is a parallel alignment search tool for comparing large protein banks version | versionsuffix | toolchain --------|---------------|---------- ``2.3.1`` | ``-Java-1.8.0_92`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PLINK.md b/docs/version-specific/supported-software/p/PLINK.md index 135da6ee9..fe6c76bc0 100644 --- a/docs/version-specific/supported-software/p/PLINK.md +++ b/docs/version-specific/supported-software/p/PLINK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PLINK PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner. The focus of PLINK is purely on analysis of genotype/phenotype data, so there is no support for steps prior to this (e.g. study design and planning, generating genotype or CNV calls from raw data). Through integration with gPLINK and Haploview, there is some support for the subsequent visualization, annotation and storage of results. @@ -23,3 +27,6 @@ version | toolchain ``2.00a3.6`` | ``GCC/11.3.0`` ``2.00a3.7`` | ``foss/2022a`` ``2.00a3.7`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PLINKSEQ.md b/docs/version-specific/supported-software/p/PLINKSEQ.md index cafcf74f0..ccaeb2fc6 100644 --- a/docs/version-specific/supported-software/p/PLINKSEQ.md +++ b/docs/version-specific/supported-software/p/PLINKSEQ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PLINKSEQ PLINK/SEQ is an open-source C/C++ library for working with human genetic variation data. The specific focus is to provide a platform for analytic tool development for variation data from large-scale resequencing and genotyping projects, particularly whole-exome and whole-genome studies. It is independent of (but designed to be complementary to) the existing PLINK package. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.10`` | ``GCC/6.4.0-2.28`` ``0.10`` | ``iccifort/2017.4.196-GCC-6.4.0-2.28`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PLUMED.md b/docs/version-specific/supported-software/p/PLUMED.md index a9c1a7ac4..c7c40354e 100644 --- a/docs/version-specific/supported-software/p/PLUMED.md +++ b/docs/version-specific/supported-software/p/PLUMED.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PLUMED PLUMED is an open source library for free energy calculations in molecular systems which works together with some of the most popular molecular dynamics engines. Free energy calculations can be performed as a function of many order parameters with a particular focus on biological problems, using state of the art methods such as metadynamics, umbrella sampling and Jarzynski-equation based steered MD. The software, written in C++, can be easily interfaced with both fortran and C/C++ codes. @@ -44,3 +48,6 @@ version | versionsuffix | toolchain ``2.8.1`` | | ``foss/2022a`` ``2.9.0`` | | ``foss/2022b`` ``2.9.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PLY.md b/docs/version-specific/supported-software/p/PLY.md index 2847c1f58..c3613f024 100644 --- a/docs/version-specific/supported-software/p/PLY.md +++ b/docs/version-specific/supported-software/p/PLY.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PLY PLY is yet another implementation of lex and yacc for Python. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``3.11`` | | ``GCCcore/12.3.0`` ``3.11`` | ``-Python-3.7.4`` | ``GCCcore/8.3.0`` ``3.11`` | ``-Python-3.6.4`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PLplot.md b/docs/version-specific/supported-software/p/PLplot.md index de20c719f..8f4c16e45 100644 --- a/docs/version-specific/supported-software/p/PLplot.md +++ b/docs/version-specific/supported-software/p/PLplot.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PLplot PLplot is a cross-platform software package for creating scientific plots whose (UTF-8) plot symbols and text are limited in practice only by what Unicode-aware system fonts are installed on a user's computer. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``5.11.1`` | ``-Java-1.7.0_80-Python-2.7.11`` | ``foss/2016a`` ``5.11.1`` | ``-Java-1.7.0_80-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PMIx.md b/docs/version-specific/supported-software/p/PMIx.md index 136c20249..31f3b9e56 100644 --- a/docs/version-specific/supported-software/p/PMIx.md +++ b/docs/version-specific/supported-software/p/PMIx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PMIx Process Management for Exascale Environments PMI Exascale (PMIx) represents an attempt to resolve these questions by providing an extended version of the PMI standard specifically designed to support clusters up to and including exascale sizes. The overall objective of the project is not to branch the existing pseudo-standard definitions - in fact, PMIx fully supports both of the existing PMI-1 and PMI-2 APIs - but rather to (a) augment and extend those APIs to eliminate some current restrictions that impact scalability, and (b) provide a reference implementation of the PMI-server that demonstrates the desired level of scalability. @@ -31,3 +35,6 @@ version | toolchain ``4.2.4`` | ``GCCcore/12.3.0`` ``4.2.6`` | ``GCCcore/13.2.0`` ``5.0.2`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/POT.md b/docs/version-specific/supported-software/p/POT.md index d6fb16112..d1abaaed6 100644 --- a/docs/version-specific/supported-software/p/POT.md +++ b/docs/version-specific/supported-software/p/POT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # POT POT (Python Optimal Transport) is a Python library provide several solvers for optimization problems related to Optimal Transport for signal, image processing and machine learning. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.5.1`` | ``-Python-3.6.6`` | ``intel/2018b`` ``0.9.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/POV-Ray.md b/docs/version-specific/supported-software/p/POV-Ray.md index 49124cdea..46d774f47 100644 --- a/docs/version-specific/supported-software/p/POV-Ray.md +++ b/docs/version-specific/supported-software/p/POV-Ray.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # POV-Ray The Persistence of Vision Raytracer, or POV-Ray, is a ray tracing program which generates images from a text-based scene description, and is available for a variety of computer platforms. POV-Ray is a high-quality, Free Software tool for creating stunning three-dimensional graphics. The source code is available for those wanting to do their own ports. @@ -16,3 +20,6 @@ version | toolchain ``3.7.0.7`` | ``intel/2018b`` ``3.7.0.8`` | ``GCC/10.2.0`` ``3.7.0.8`` | ``iccifort/2020.4.304`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PPanGGOLiN.md b/docs/version-specific/supported-software/p/PPanGGOLiN.md index ed37f30c0..e1cd58c46 100644 --- a/docs/version-specific/supported-software/p/PPanGGOLiN.md +++ b/docs/version-specific/supported-software/p/PPanGGOLiN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PPanGGOLiN PPanGGOLiN is a software suite used to create and manipulate prokaryotic pangenomes from a set of either genomic DNA sequences or provided genome annotations. It is designed to scale up to tens of thousands of genomes. It has the specificity to partition the pangenome using a statistical approach rather than using fixed thresholds which gives it the ability to work with low-quality data such as Metagenomic Assembled Genomes (MAGs) or Single-cell Amplified Genomes (SAGs) thus taking advantage of large scale environmental studies and letting users study the pangenome of uncultivable species. @@ -7,3 +11,6 @@ PPanGGOLiN is a software suite used to create and manipulate prokaryotic pangeno version | toolchain --------|---------- ``1.1.136`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PPfold.md b/docs/version-specific/supported-software/p/PPfold.md index 26dcd77b4..5c80afe09 100644 --- a/docs/version-specific/supported-software/p/PPfold.md +++ b/docs/version-specific/supported-software/p/PPfold.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PPfold PPfold is a new implementation of pfold, written in Java 6.0. It can predict the consensus secondary structure of RNA alignments through a stochastic context-free grammar coupled to an evolutionary model. It can also use data from chemical probing experiments to predict RNA secondary structure. PPfold is multithreaded, and can solve the structure of much longer alignments than pfold. @@ -7,3 +11,6 @@ PPfold is a new implementation of pfold, written in Java 6.0. It can predict the version | versionsuffix | toolchain --------|---------------|---------- ``3.1.1`` | ``-Java-1.8.0_66`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PRANK.md b/docs/version-specific/supported-software/p/PRANK.md index 9b6cf16ae..d45b0a0e3 100644 --- a/docs/version-specific/supported-software/p/PRANK.md +++ b/docs/version-specific/supported-software/p/PRANK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PRANK PRANK is a probabilistic multiple alignment program for DNA, codon and amino-acid sequences. PRANK is based on a novel algorithm that treats insertions correctly and avoids over-estimation of the number of deletion events. @@ -13,3 +17,6 @@ version | toolchain ``170427`` | ``GCC/12.3.0`` ``170427`` | ``GCC/9.3.0`` ``170427`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PRC.md b/docs/version-specific/supported-software/p/PRC.md index cbc5f84fa..f7d807caa 100644 --- a/docs/version-specific/supported-software/p/PRC.md +++ b/docs/version-specific/supported-software/p/PRC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PRC PRC is a stand-alone program for aligning and scoring two profile hidden Markov models. This can be used to detect remote relationships between profiles more effectively than by doing simple profile-sequence comparisons. PRC takes into account all transition and emission probabilities in both hidden Markov models. @@ -7,3 +11,6 @@ PRC is a stand-alone program for aligning and scoring two profile hidden Markov version | toolchain --------|---------- ``1.5.6`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PREQUAL.md b/docs/version-specific/supported-software/p/PREQUAL.md index 145a54e8d..6d1cd1ebd 100644 --- a/docs/version-specific/supported-software/p/PREQUAL.md +++ b/docs/version-specific/supported-software/p/PREQUAL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PREQUAL A program to identify and mask regions with non-homologous adjacent characters in FASTA files. @@ -7,3 +11,6 @@ A program to identify and mask regions with non-homologous adjacent characters i version | toolchain --------|---------- ``1.02`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PRINSEQ.md b/docs/version-specific/supported-software/p/PRINSEQ.md index 765bb116f..caaa0cc8f 100644 --- a/docs/version-specific/supported-software/p/PRINSEQ.md +++ b/docs/version-specific/supported-software/p/PRINSEQ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PRINSEQ A bioinformatics tool to PRe-process and show INformation of SEQuence data. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.20.4`` | ``-Perl-5.28.0`` | ``foss/2018b`` ``0.20.4`` | ``-Perl-5.32.0`` | ``foss/2020b`` ``0.20.4`` | ``-Perl-5.34.0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PRISMS-PF.md b/docs/version-specific/supported-software/p/PRISMS-PF.md index f7f3f6b71..166b0b27b 100644 --- a/docs/version-specific/supported-software/p/PRISMS-PF.md +++ b/docs/version-specific/supported-software/p/PRISMS-PF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PRISMS-PF PRISMS-PF is a powerful, massively parallel finite element code for conducting phase field and other related simulations of microstructural evolution. @@ -9,3 +13,6 @@ version | toolchain ``2.1.1`` | ``foss/2019a`` ``2.1.1`` | ``intel/2019a`` ``2.2`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PROJ.md b/docs/version-specific/supported-software/p/PROJ.md index c67010f22..ecec12131 100644 --- a/docs/version-specific/supported-software/p/PROJ.md +++ b/docs/version-specific/supported-software/p/PROJ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PROJ Program proj is a standard Unix filter function which converts geographic longitude and latitude coordinates into cartesian coordinates @@ -31,3 +35,6 @@ version | toolchain ``9.1.1`` | ``GCCcore/12.2.0`` ``9.2.0`` | ``GCCcore/12.3.0`` ``9.3.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PRRTE.md b/docs/version-specific/supported-software/p/PRRTE.md index 79ca3bbf1..a75b6d5f1 100644 --- a/docs/version-specific/supported-software/p/PRRTE.md +++ b/docs/version-specific/supported-software/p/PRRTE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PRRTE PRRTE is the PMIx Reference RunTime Environment @@ -7,3 +11,6 @@ PRRTE is the PMIx Reference RunTime Environment version | toolchain --------|---------- ``3.0.5`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PRSice.md b/docs/version-specific/supported-software/p/PRSice.md index 7769b25e9..ddb9ab3e3 100644 --- a/docs/version-specific/supported-software/p/PRSice.md +++ b/docs/version-specific/supported-software/p/PRSice.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PRSice PRSice (pronounced 'precise') is a Polygenic Risk Score software for calculating, applying, evaluating and plotting the results of polygenic risk scores (PRS) analyses. @@ -12,3 +16,6 @@ version | toolchain ``2.3.3`` | ``GCCcore/9.3.0`` ``2.3.5`` | ``GCCcore/11.3.0`` ``2.3.5`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PSASS.md b/docs/version-specific/supported-software/p/PSASS.md index 40e5ac3a8..b1c5c700e 100644 --- a/docs/version-specific/supported-software/p/PSASS.md +++ b/docs/version-specific/supported-software/p/PSASS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PSASS PSASS (Pooled Sequencing Analysis for Sex Signal) is a software to compare pooled sequencing datasets from two groups (usually two sexes). Results from PSASS can be easily visualized using the sgtr R package. PSASS is integrated in a Snakemake workflow to perform all required steps starting from a genome and reads files. @@ -7,3 +11,6 @@ PSASS (Pooled Sequencing Analysis for Sex Signal) is a software to compare poole version | toolchain --------|---------- ``3.1.0`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PSI.md b/docs/version-specific/supported-software/p/PSI.md index 50b40291f..8316d830c 100644 --- a/docs/version-specific/supported-software/p/PSI.md +++ b/docs/version-specific/supported-software/p/PSI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PSI PSI4 is an open-source suite of ab initio quantum chemistry programs designed for efficient, high-accuracy simulations of a variety of molecular properties. We can routinely perform computations with more than 2500 basis functions running serially or in parallel. @@ -7,3 +11,6 @@ PSI4 is an open-source suite of ab initio quantum chemistry programs designed fo version | versionsuffix | toolchain --------|---------------|---------- ``4.0b6-20160201`` | ``-mt-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PSI4.md b/docs/version-specific/supported-software/p/PSI4.md index 4244db741..da428e282 100644 --- a/docs/version-specific/supported-software/p/PSI4.md +++ b/docs/version-specific/supported-software/p/PSI4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PSI4 PSI4 is an open-source suite of ab initio quantum chemistry programs designed for efficient, high-accuracy simulations of a variety of molecular properties. We can routinely perform computations with more than 2500 basis functions running serially or in parallel. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``1.3.1`` | ``-Python-3.7.2`` | ``foss/2019a`` ``1.3.2`` | ``-Python-3.7.4`` | ``intel/2019b`` ``1.7`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PSIPRED.md b/docs/version-specific/supported-software/p/PSIPRED.md index 2e57a5b69..a75513c76 100644 --- a/docs/version-specific/supported-software/p/PSIPRED.md +++ b/docs/version-specific/supported-software/p/PSIPRED.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PSIPRED Accurate protein secondary structure prediction @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``4.02`` | ``GCC/12.3.0`` ``4.02`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PSM2.md b/docs/version-specific/supported-software/p/PSM2.md index 41d7419e7..5b34bf4db 100644 --- a/docs/version-specific/supported-software/p/PSM2.md +++ b/docs/version-specific/supported-software/p/PSM2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PSM2 Low-level user-space communications interface for the Intel(R) OPA family of products. @@ -13,3 +17,6 @@ version | toolchain ``12.0.1`` | ``GCCcore/12.3.0`` ``12.0.1`` | ``GCCcore/13.2.0`` ``12.0.1`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PSORTb.md b/docs/version-specific/supported-software/p/PSORTb.md index eb8d4327f..fb41a0dc6 100644 --- a/docs/version-specific/supported-software/p/PSORTb.md +++ b/docs/version-specific/supported-software/p/PSORTb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PSORTb PSORTb v3.0.4 is the most precise bacterial localization prediction tool available. @@ -7,3 +11,6 @@ PSORTb v3.0.4 is the most precise bacterial localization prediction tool availab version | versionsuffix | toolchain --------|---------------|---------- ``3.0.4`` | ``-Perl-5.22.1`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PSolver.md b/docs/version-specific/supported-software/p/PSolver.md index 4dbb5c10c..3a4a25d0b 100644 --- a/docs/version-specific/supported-software/p/PSolver.md +++ b/docs/version-specific/supported-software/p/PSolver.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PSolver Poisson Solver from the BigDFT code compiled as a standalone library. @@ -18,3 +22,6 @@ version | toolchain ``1.8.3`` | ``intel/2020b`` ``1.8.3`` | ``intel/2021a`` ``1.8.3`` | ``intel/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PTESFinder.md b/docs/version-specific/supported-software/p/PTESFinder.md index aa7cf5ddb..172689472 100644 --- a/docs/version-specific/supported-software/p/PTESFinder.md +++ b/docs/version-specific/supported-software/p/PTESFinder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PTESFinder Post-Transcriptional Exon Shuffling (PTES) Identification Pipeline @@ -7,3 +11,6 @@ Post-Transcriptional Exon Shuffling (PTES) Identification Pipeline version | toolchain --------|---------- ``1`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PYPOWER.md b/docs/version-specific/supported-software/p/PYPOWER.md index 72e12c083..c47cc4696 100644 --- a/docs/version-specific/supported-software/p/PYPOWER.md +++ b/docs/version-specific/supported-software/p/PYPOWER.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PYPOWER PYPOWER is a power flow and Optimal Power Flow (OPF) solver. It is a port of MATPOWER to the Python programming language. @@ -7,3 +11,6 @@ PYPOWER is a power flow and Optimal Power Flow (OPF) solver. It is a port of MAT version | toolchain --------|---------- ``5.1.15`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PYTHIA.md b/docs/version-specific/supported-software/p/PYTHIA.md index 9ccef9f73..5a8922ff6 100644 --- a/docs/version-specific/supported-software/p/PYTHIA.md +++ b/docs/version-specific/supported-software/p/PYTHIA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PYTHIA PYTHIA is a standard tool for the generation of events in high-energy collisions, comprising a coherent set of physics models for the evolution from a few-body hard process to a complex multiparticle final state. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``8.226`` | ``-Python-2.7.13`` | ``intel/2017a`` ``8.309`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PaStiX.md b/docs/version-specific/supported-software/p/PaStiX.md index b068ed105..107fa0840 100644 --- a/docs/version-specific/supported-software/p/PaStiX.md +++ b/docs/version-specific/supported-software/p/PaStiX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PaStiX PaStiX (Parallel Sparse matriX package) is a scientific library that provides a high performance parallel solver for very large sparse linear systems based on direct methods. @@ -7,3 +11,6 @@ PaStiX (Parallel Sparse matriX package) is a scientific library that provides a version | toolchain --------|---------- ``5.2.3`` | ``foss/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pandoc.md b/docs/version-specific/supported-software/p/Pandoc.md index b293bc964..b441b59d8 100644 --- a/docs/version-specific/supported-software/p/Pandoc.md +++ b/docs/version-specific/supported-software/p/Pandoc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pandoc If you need to convert files from one markup format into another, pandoc is your swiss-army knife @@ -11,3 +15,6 @@ version | toolchain ``2.13`` | ``system`` ``2.5`` | ``system`` ``3.1.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Panedr.md b/docs/version-specific/supported-software/p/Panedr.md index cae4abd65..fc6036f6a 100644 --- a/docs/version-specific/supported-software/p/Panedr.md +++ b/docs/version-specific/supported-software/p/Panedr.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Panedr Panedr uses the Pyedr library to read a Gromacs EDR binary energy XDR file and returns its contents as a pandas dataframe. @@ -7,3 +11,6 @@ Panedr uses the Pyedr library to read a Gromacs EDR binary energy XDR file and r version | toolchain --------|---------- ``0.7.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pango.md b/docs/version-specific/supported-software/p/Pango.md index a572de6f2..c337c2e08 100644 --- a/docs/version-specific/supported-software/p/Pango.md +++ b/docs/version-specific/supported-software/p/Pango.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pango Pango is a library for laying out and rendering of text, with an emphasis on internationalization. Pango can be used anywhere that text layout is needed, though most of the work on Pango so far has been done in the context of the GTK+ widget toolkit. Pango forms the core of text and font handling for GTK+-2.x. @@ -32,3 +36,6 @@ version | toolchain ``1.50.14`` | ``GCCcore/12.3.0`` ``1.50.7`` | ``GCCcore/11.3.0`` ``1.51.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/ParMETIS.md b/docs/version-specific/supported-software/p/ParMETIS.md index ed6e4d632..8ddcd275a 100644 --- a/docs/version-specific/supported-software/p/ParMETIS.md +++ b/docs/version-specific/supported-software/p/ParMETIS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ParMETIS ParMETIS is an MPI-based parallel library that implements a variety of algorithms for partitioning unstructured graphs, meshes, and for computing fill-reducing orderings of sparse matrices. ParMETIS extends the functionality provided by METIS and includes routines that are especially suited for parallel AMR computations and large scale numerical simulations. The algorithms implemented in ParMETIS are based on the parallel multilevel k-way graph-partitioning, adaptive repartitioning, and parallel multi-constrained partitioning schemes. @@ -34,3 +38,6 @@ version | toolchain ``4.0.3`` | ``intel/2017b`` ``4.0.3`` | ``intel/2018a`` ``4.0.3`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/ParMGridGen.md b/docs/version-specific/supported-software/p/ParMGridGen.md index ee5b57ced..57fefb70b 100644 --- a/docs/version-specific/supported-software/p/ParMGridGen.md +++ b/docs/version-specific/supported-software/p/ParMGridGen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ParMGridGen ParMGridGen is an MPI-based parallel library that is based on the serial package MGridGen, that implements (serial) algorithms for obtaining a sequence of successive coarse grids that are well-suited for geometric multigrid methods. @@ -13,3 +17,6 @@ version | toolchain ``1.0`` | ``iimpi/2020a`` ``1.0`` | ``intel/2016a`` ``1.0`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/ParaView.md b/docs/version-specific/supported-software/p/ParaView.md index c1e1f07d3..1d6a87aa2 100644 --- a/docs/version-specific/supported-software/p/ParaView.md +++ b/docs/version-specific/supported-software/p/ParaView.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ParaView ParaView is a scientific parallel visualizer. @@ -37,3 +41,6 @@ version | versionsuffix | toolchain ``5.9.1`` | ``-mpi`` | ``foss/2021a`` ``5.9.1`` | ``-mpi`` | ``foss/2021b`` ``5.9.1`` | ``-mpi`` | ``intel/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Parallel-Hashmap.md b/docs/version-specific/supported-software/p/Parallel-Hashmap.md index 099f492a5..08835e644 100644 --- a/docs/version-specific/supported-software/p/Parallel-Hashmap.md +++ b/docs/version-specific/supported-software/p/Parallel-Hashmap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Parallel-Hashmap Parallel Hashmap is built on a modified version of Abseil's flat_hash_map. Parallel Hashmap has lower space requirements, is nearly as fast as the underlying flat_hash_map, and can be used from multiple threads with high levels of concurrency. @@ -9,3 +13,6 @@ version | toolchain ``1.3.12`` | ``GCCcore/12.3.0`` ``1.33`` | ``GCCcore/10.3.0`` ``1.36`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/ParallelIO.md b/docs/version-specific/supported-software/p/ParallelIO.md index d2338392e..e215bb7d2 100644 --- a/docs/version-specific/supported-software/p/ParallelIO.md +++ b/docs/version-specific/supported-software/p/ParallelIO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ParallelIO A high-level Parallel I/O Library for structured grid applications @@ -9,3 +13,6 @@ version | toolchain ``2.2.2a`` | ``intel/2017a`` ``2.5.10`` | ``gompi/2022a`` ``2.5.10`` | ``iimpi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Paraver.md b/docs/version-specific/supported-software/p/Paraver.md index 4803228fb..e1ecbb0ef 100644 --- a/docs/version-specific/supported-software/p/Paraver.md +++ b/docs/version-specific/supported-software/p/Paraver.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Paraver A very powerful performance visualization and analysis tool based on traces that can be used to analyse any information that is expressed on its input trace format. Traces for parallel MPI, OpenMP and other programs can be genereated with Extrae. @@ -9,3 +13,6 @@ version | toolchain ``4.11.1`` | ``foss/2022a`` ``4.8.1`` | ``foss/2019a`` ``4.9.2`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Parcels.md b/docs/version-specific/supported-software/p/Parcels.md index de36485ca..3eae410fd 100644 --- a/docs/version-specific/supported-software/p/Parcels.md +++ b/docs/version-specific/supported-software/p/Parcels.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Parcels Parcels (Probably A Really Computationally Efficient Lagrangian Simulator) is a set of Python classes and methods to create customisable particle tracking simulations using output from Ocean Circulation models. Parcels can be used to track passive and active particulates such as water, plankton, plastic and fish. @@ -7,3 +11,6 @@ Parcels (Probably A Really Computationally Efficient Lagrangian Simulator) is a version | toolchain --------|---------- ``2.4.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/ParmEd.md b/docs/version-specific/supported-software/p/ParmEd.md index 3b00db39f..06628649c 100644 --- a/docs/version-specific/supported-software/p/ParmEd.md +++ b/docs/version-specific/supported-software/p/ParmEd.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ParmEd ParmEd is a general tool for aiding in investigations of biomolecular systems using popular molecular simulation packages, like Amber, CHARMM, and OpenMM written in Python. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.7.3`` | ``-Python-3.6.3`` | ``intel/2017b`` ``3.2.0`` | ``-Python-3.7.4`` | ``intel/2019b`` ``3.2.0`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Parsl.md b/docs/version-specific/supported-software/p/Parsl.md index 74ee43b9d..aab0dd605 100644 --- a/docs/version-specific/supported-software/p/Parsl.md +++ b/docs/version-specific/supported-software/p/Parsl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Parsl Parsl extends parallelism in Python beyond a single computer. You can use Parsl just like Python's parallel executors but across multiple cores and nodes. However, the real power of Parsl is in expressing multi-step workflows of functions. Parsl lets you chain functions together and will launch each function as inputs and computing resources are available. @@ -7,3 +11,6 @@ Parsl extends parallelism in Python beyond a single computer. You can use Parsl version | toolchain --------|---------- ``2023.7.17`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PartitionFinder.md b/docs/version-specific/supported-software/p/PartitionFinder.md index 868820b38..d8c6311ad 100644 --- a/docs/version-specific/supported-software/p/PartitionFinder.md +++ b/docs/version-specific/supported-software/p/PartitionFinder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PartitionFinder PartitionFinder 2 is a Python program for simultaneously choosing partitioning schemes and models of molecular evolution for phylogenetic analyses of DNA, protein, and morphological data. You can PartitionFinder 2 before running a phylogenetic analysis, in order to decide how to divide up your sequence data into separate blocks before analysis, and to simultaneously perform model selection on each of those blocks. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.1.1`` | ``-Python-2.7.18`` | ``foss/2020b`` ``2.1.1`` | ``-Python-2.7.16`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PennCNV.md b/docs/version-specific/supported-software/p/PennCNV.md index aeea9fcff..b3f3d8034 100644 --- a/docs/version-specific/supported-software/p/PennCNV.md +++ b/docs/version-specific/supported-software/p/PennCNV.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PennCNV A free software tool for Copy Number Variation (CNV) detection from SNP genotyping arrays. Currently it can handle signal intensity data from Illumina and Affymetrix arrays. With appropriate preparation of file format, it can also handle other types of SNP arrays and oligonucleotide arrays. @@ -7,3 +11,6 @@ A free software tool for Copy Number Variation (CNV) detection from SNP genotypi version | toolchain --------|---------- ``1.0.5`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Percolator.md b/docs/version-specific/supported-software/p/Percolator.md index 34acd67c1..2bbbefcf7 100644 --- a/docs/version-specific/supported-software/p/Percolator.md +++ b/docs/version-specific/supported-software/p/Percolator.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Percolator Semi-supervised learning for peptide identification from shotgun proteomics datasets @@ -7,3 +11,6 @@ Semi-supervised learning for peptide identification from shotgun proteomics data version | toolchain --------|---------- ``3.4`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Perl-bundle-CPAN.md b/docs/version-specific/supported-software/p/Perl-bundle-CPAN.md index 66864c500..4a19c6bad 100644 --- a/docs/version-specific/supported-software/p/Perl-bundle-CPAN.md +++ b/docs/version-specific/supported-software/p/Perl-bundle-CPAN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Perl-bundle-CPAN A set of common packages from CPAN @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``5.36.1`` | ``GCCcore/12.3.0`` ``5.38.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Perl.md b/docs/version-specific/supported-software/p/Perl.md index 0ae0ce967..84e7c032d 100644 --- a/docs/version-specific/supported-software/p/Perl.md +++ b/docs/version-specific/supported-software/p/Perl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Perl Larry Wall's Practical Extraction and Report Language @@ -58,3 +62,6 @@ version | versionsuffix | toolchain ``5.38.0`` | | ``GCCcore/13.2.0`` ``5.38.0`` | | ``system`` ``5.38.2`` | | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Perl4-CoreLibs.md b/docs/version-specific/supported-software/p/Perl4-CoreLibs.md index 693b913bf..e9cef29f4 100644 --- a/docs/version-specific/supported-software/p/Perl4-CoreLibs.md +++ b/docs/version-specific/supported-software/p/Perl4-CoreLibs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Perl4-CoreLibs Libraries historically supplied with Perl 4 @@ -7,3 +11,6 @@ Libraries historically supplied with Perl 4 version | versionsuffix | toolchain --------|---------------|---------- ``0.003`` | ``-Perl-5.24.1`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Perseus.md b/docs/version-specific/supported-software/p/Perseus.md index 2e764341f..fd2d26417 100644 --- a/docs/version-specific/supported-software/p/Perseus.md +++ b/docs/version-specific/supported-software/p/Perseus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Perseus The Perseus software platform supports biological and biomedical researchers in interpreting protein quantification, interaction and post-translational modification data. @@ -7,3 +11,6 @@ The Perseus software platform supports biological and biomedical researchers version | toolchain --------|---------- ``2.0.7.0`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PfamScan.md b/docs/version-specific/supported-software/p/PfamScan.md index 7f7ee624e..54b70ad44 100644 --- a/docs/version-specific/supported-software/p/PfamScan.md +++ b/docs/version-specific/supported-software/p/PfamScan.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PfamScan PfamScan is used to search a FASTA sequence against a library of Pfam HMM. @@ -7,3 +11,6 @@ PfamScan is used to search a FASTA sequence against a library of Pfam HMM. version | toolchain --------|---------- ``1.6`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Phantompeakqualtools.md b/docs/version-specific/supported-software/p/Phantompeakqualtools.md index 655324e35..2f9b67143 100644 --- a/docs/version-specific/supported-software/p/Phantompeakqualtools.md +++ b/docs/version-specific/supported-software/p/Phantompeakqualtools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Phantompeakqualtools It computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. @@ -7,3 +11,6 @@ It computes informative enrichment and quality measures for ChIP-seq/DNase-seq/F version | toolchain --------|---------- ``1.2.2`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PheWAS.md b/docs/version-specific/supported-software/p/PheWAS.md index e3fa99051..b424423ee 100644 --- a/docs/version-specific/supported-software/p/PheWAS.md +++ b/docs/version-specific/supported-software/p/PheWAS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PheWAS Provides an accessible R interface to the phenome wide association study. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.12`` | ``-R-3.3.3`` | ``intel/2016b`` ``0.99.5-2`` | ``-R-3.6.0`` | ``foss/2019a`` ``0.99.5-2`` | ``-R-3.6.0`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PheWeb.md b/docs/version-specific/supported-software/p/PheWeb.md index 9b7c648ce..28d88ae04 100644 --- a/docs/version-specific/supported-software/p/PheWeb.md +++ b/docs/version-specific/supported-software/p/PheWeb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PheWeb A tool for building PheWAS websites from association files @@ -7,3 +11,6 @@ A tool for building PheWAS websites from association files version | versionsuffix | toolchain --------|---------------|---------- ``1.1.20`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Phenoflow.md b/docs/version-specific/supported-software/p/Phenoflow.md index 90bf6b2e5..340410e49 100644 --- a/docs/version-specific/supported-software/p/Phenoflow.md +++ b/docs/version-specific/supported-software/p/Phenoflow.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Phenoflow R package offering functionality for the advanced analysis of microbial flow cytometry data @@ -7,3 +11,6 @@ R package offering functionality for the advanced analysis of microbial flow cyt version | versionsuffix | toolchain --------|---------------|---------- ``1.1.2-20200917`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PhiPack.md b/docs/version-specific/supported-software/p/PhiPack.md index d2ec6a230..4ae22be5e 100644 --- a/docs/version-specific/supported-software/p/PhiPack.md +++ b/docs/version-specific/supported-software/p/PhiPack.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PhiPack The PhiPack software package implements (in C) a few tests for recombination and can produce refined incompatibility matrices as well. @@ -7,3 +11,6 @@ The PhiPack software package implements (in C) a few tests for recombination and version | toolchain --------|---------- ``2016.06.14`` | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Philosopher.md b/docs/version-specific/supported-software/p/Philosopher.md index 6687e02f6..10929f228 100644 --- a/docs/version-specific/supported-software/p/Philosopher.md +++ b/docs/version-specific/supported-software/p/Philosopher.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Philosopher Philosopher is a fast, easy-to-use, scalable, and versatile data analysis software for mass spectrometry-based proteomics. Philosopher is dependency-free and can analyze both traditional database searches and open searches for post-translational modification (PTM) discovery. @@ -7,3 +11,6 @@ Philosopher is a fast, easy-to-use, scalable, and versatile data analysis softw version | toolchain --------|---------- ``5.0.0`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PhyML.md b/docs/version-specific/supported-software/p/PhyML.md index 216df9539..7f19faa2d 100644 --- a/docs/version-specific/supported-software/p/PhyML.md +++ b/docs/version-specific/supported-software/p/PhyML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PhyML Phylogenetic estimation using (Maximum) Likelihood @@ -9,3 +13,6 @@ version | toolchain ``3.3.20190321`` | ``foss/2018b`` ``3.3.20200621`` | ``foss/2020b`` ``3.3.20220408`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PhyloBayes-MPI.md b/docs/version-specific/supported-software/p/PhyloBayes-MPI.md index 07551a720..82d6f45dc 100644 --- a/docs/version-specific/supported-software/p/PhyloBayes-MPI.md +++ b/docs/version-specific/supported-software/p/PhyloBayes-MPI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PhyloBayes-MPI A Bayesian software for phylogenetic reconstruction using mixture models @@ -7,3 +11,6 @@ A Bayesian software for phylogenetic reconstruction using mixture models version | toolchain --------|---------- ``20161021`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PhyloPhlAn.md b/docs/version-specific/supported-software/p/PhyloPhlAn.md index 928cda72c..54bc0c7b6 100644 --- a/docs/version-specific/supported-software/p/PhyloPhlAn.md +++ b/docs/version-specific/supported-software/p/PhyloPhlAn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PhyloPhlAn PhyloPhlAn is an integrated pipeline for large-scale phylogenetic profiling of genomes and metagenomes. PhyloPhlAn is an accurate, rapid, and easy-to-use method for large-scale microbial genome characterization and phylogenetic analysis at multiple levels of resolution. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``3.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``3.0.2`` | | ``foss/2021a`` ``3.0.3`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PileOMeth.md b/docs/version-specific/supported-software/p/PileOMeth.md index 083c15868..b12b7271d 100644 --- a/docs/version-specific/supported-software/p/PileOMeth.md +++ b/docs/version-specific/supported-software/p/PileOMeth.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PileOMeth PileOMeth processes a coordinate-sorted and indexed BAM or CRAM file containing some form of BS-seq alignments. PileOMeth extracts per-base methylation metrics from them. PileOMeth requires an indexed fasta file containing the reference genome as well. @@ -7,3 +11,6 @@ PileOMeth processes a coordinate-sorted and indexed BAM or CRAM file containing version | toolchain --------|---------- ``0.1.11`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pillow-SIMD.md b/docs/version-specific/supported-software/p/Pillow-SIMD.md index 677ddae36..d872550da 100644 --- a/docs/version-specific/supported-software/p/Pillow-SIMD.md +++ b/docs/version-specific/supported-software/p/Pillow-SIMD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pillow-SIMD Pillow is the 'friendly PIL fork' by Alex Clark and Contributors. PIL is the Python Imaging Library by Fredrik Lundh and Contributors. @@ -21,3 +25,6 @@ version | versionsuffix | toolchain ``9.2.0`` | | ``GCCcore/11.3.0`` ``9.5.0`` | | ``GCCcore/12.2.0`` ``9.5.0`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pillow.md b/docs/version-specific/supported-software/p/Pillow.md index 3b29083d4..49a18b3ab 100644 --- a/docs/version-specific/supported-software/p/Pillow.md +++ b/docs/version-specific/supported-software/p/Pillow.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pillow Pillow is the 'friendly PIL fork' by Alex Clark and Contributors. PIL is the Python Imaging Library by Fredrik Lundh and Contributors. @@ -45,3 +49,6 @@ version | versionsuffix | toolchain ``9.1.1`` | | ``GCCcore/11.3.0`` ``9.2.0`` | | ``GCCcore/10.2.0`` ``9.4.0`` | | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pilon.md b/docs/version-specific/supported-software/p/Pilon.md index de4001218..77971f2bd 100644 --- a/docs/version-specific/supported-software/p/Pilon.md +++ b/docs/version-specific/supported-software/p/Pilon.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pilon Pilon is an automated genome assembly improvement and variant detection tool @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.22`` | ``-Java-1.8`` | ``system`` ``1.23`` | ``-Java-1.8`` | ``system`` ``1.23`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pindel.md b/docs/version-specific/supported-software/p/Pindel.md index b6e1f3177..889bb32ed 100644 --- a/docs/version-specific/supported-software/p/Pindel.md +++ b/docs/version-specific/supported-software/p/Pindel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pindel Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads. @@ -10,3 +14,6 @@ version | toolchain ``0.2.5b9-20170508`` | ``GCC/11.2.0`` ``0.2.5b9-20170508`` | ``GCC/11.3.0`` ``0.2.5b9-20170508`` | ``GCC/6.4.0-2.28`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pingouin.md b/docs/version-specific/supported-software/p/Pingouin.md index 6fa41c707..48ce9c3a7 100644 --- a/docs/version-specific/supported-software/p/Pingouin.md +++ b/docs/version-specific/supported-software/p/Pingouin.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pingouin Pingouin is an open-source statistical package written in Python 3 and based mostly on Pandas and NumPy. @@ -7,3 +11,6 @@ Pingouin is an open-source statistical package written in Python 3 and based mos version | versionsuffix | toolchain --------|---------------|---------- ``0.3.8`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pint.md b/docs/version-specific/supported-software/p/Pint.md index 93abaf403..2ea86d926 100644 --- a/docs/version-specific/supported-software/p/Pint.md +++ b/docs/version-specific/supported-software/p/Pint.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pint Pint is a Python package to define, operate and manipulate physical quantities: the product of a numerical value and a unit of measurement. It allows arithmetic operations between them and conversions from and to different units. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.20.1`` | | ``GCCcore/10.3.0`` ``0.22`` | | ``GCCcore/11.3.0`` ``0.23`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pisces.md b/docs/version-specific/supported-software/p/Pisces.md index eb15b18e6..51094bce3 100644 --- a/docs/version-specific/supported-software/p/Pisces.md +++ b/docs/version-specific/supported-software/p/Pisces.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pisces Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows. @@ -7,3 +11,6 @@ Somatic and germline variant caller for amplicon data. Recommended caller for tu version | toolchain --------|---------- ``5.2.7.47`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PlaScope.md b/docs/version-specific/supported-software/p/PlaScope.md index 1537c92ac..6ce59a248 100644 --- a/docs/version-specific/supported-software/p/PlaScope.md +++ b/docs/version-specific/supported-software/p/PlaScope.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PlaScope Plasmid exploration of bacterial genomes @@ -7,3 +11,6 @@ Plasmid exploration of bacterial genomes version | toolchain --------|---------- ``1.3.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PlasmaPy.md b/docs/version-specific/supported-software/p/PlasmaPy.md index b43aa4c9e..24c3acd3c 100644 --- a/docs/version-specific/supported-software/p/PlasmaPy.md +++ b/docs/version-specific/supported-software/p/PlasmaPy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PlasmaPy Open source Python ecosystem for plasma research and education @@ -7,3 +11,6 @@ Open source Python ecosystem for plasma research and education version | versionsuffix | toolchain --------|---------------|---------- ``0.3.1`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Platanus.md b/docs/version-specific/supported-software/p/Platanus.md index 857c2589f..f1ea4979a 100644 --- a/docs/version-specific/supported-software/p/Platanus.md +++ b/docs/version-specific/supported-software/p/Platanus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Platanus PLATform for Assembling NUcleotide Sequences @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.2.1`` | ``-linux-x86_64`` | ``system`` ``1.2.4`` | | ``foss/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Platypus-Opt.md b/docs/version-specific/supported-software/p/Platypus-Opt.md index 2a03f51d1..8616415dc 100644 --- a/docs/version-specific/supported-software/p/Platypus-Opt.md +++ b/docs/version-specific/supported-software/p/Platypus-Opt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Platypus-Opt Platypus is a framework for evolutionary computing in Python with a focus on multiobjective evolutionary algorithms (MOEAs). @@ -7,3 +11,6 @@ Platypus is a framework for evolutionary computing in Python with a focus on mu version | toolchain --------|---------- ``1.1.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Platypus.md b/docs/version-specific/supported-software/p/Platypus.md index a2dfbbaa4..973143699 100644 --- a/docs/version-specific/supported-software/p/Platypus.md +++ b/docs/version-specific/supported-software/p/Platypus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Platypus Platypus is a tool designed for efficient and accurate variant-detection in high-throughput sequencing data. @@ -7,3 +11,6 @@ Platypus is a tool designed for efficient and accurate variant-detection in hig version | versionsuffix | toolchain --------|---------------|---------- ``0.8.1`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Ploticus.md b/docs/version-specific/supported-software/p/Ploticus.md index d138e121e..922cccb46 100644 --- a/docs/version-specific/supported-software/p/Ploticus.md +++ b/docs/version-specific/supported-software/p/Ploticus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Ploticus Ploticus is a free GPL software utility that can produce various types of plots and graphs @@ -7,3 +11,6 @@ Ploticus is a free GPL software utility that can produce various types of plots version | toolchain --------|---------- ``2.42`` | ``GCCcore/7.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PnetCDF.md b/docs/version-specific/supported-software/p/PnetCDF.md index 9235fbc2f..c92048779 100644 --- a/docs/version-specific/supported-software/p/PnetCDF.md +++ b/docs/version-specific/supported-software/p/PnetCDF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PnetCDF Parallel netCDF: A Parallel I/O Library for NetCDF File Access @@ -24,3 +28,6 @@ version | toolchain ``1.13.0`` | ``iimpi/2023a`` ``1.8.1`` | ``intel/2017a`` ``1.9.0`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Porechop.md b/docs/version-specific/supported-software/p/Porechop.md index 5bb2af7e2..a3582562e 100644 --- a/docs/version-specific/supported-software/p/Porechop.md +++ b/docs/version-specific/supported-software/p/Porechop.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Porechop Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate reads. Porechop performs thorough alignments to effectively find adapters, even at low sequence identity @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.2.4`` | | ``GCCcore/11.2.0`` ``0.2.4`` | ``-Python-3.6.6`` | ``foss/2018b`` ``0.2.4`` | ``-Python-3.7.4`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PortAudio.md b/docs/version-specific/supported-software/p/PortAudio.md index ad667b59b..38a7a172b 100644 --- a/docs/version-specific/supported-software/p/PortAudio.md +++ b/docs/version-specific/supported-software/p/PortAudio.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PortAudio PortAudio is a free, cross-platform, open-source, audio I/O library. It lets you write simple audio programs in 'C' or C++ that will compile and run on many platforms including Windows, Macintosh OS X, and Unix (OSS/ALSA). It is intended to promote the exchange of audio software between developers on different platforms. Many applications use PortAudio for Audio I/O. @@ -7,3 +11,6 @@ PortAudio is a free, cross-platform, open-source, audio I/O library. It lets yo version | toolchain --------|---------- ``19.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PortMidi.md b/docs/version-specific/supported-software/p/PortMidi.md index 0a7358017..9f7636da6 100644 --- a/docs/version-specific/supported-software/p/PortMidi.md +++ b/docs/version-specific/supported-software/p/PortMidi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PortMidi PortMidi is a library for software developers. It supports real-time input and output of MIDI data using a system-independent interface. PortMidi runs on Windows (using MME), Macintosh (using CoreMIDI), and Linux (using ALSA). @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.0.4`` | ``GCCcore/11.3.0`` ``2.0.4`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Portcullis.md b/docs/version-specific/supported-software/p/Portcullis.md index 57d6edf27..547f77867 100644 --- a/docs/version-specific/supported-software/p/Portcullis.md +++ b/docs/version-specific/supported-software/p/Portcullis.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Portcullis Portcullis stands for PORTable CULLing of Invalid Splice junctions from pre-aligned RNA-seq data. It is known that RNAseq mapping tools generate many invalid junction predictions, particularly in deep datasets with high coverage over splice sites. In order to address this, instead for creating a new RNAseq mapper, with a focus on SJ accuracy we created a tool that takes in a BAM file generated by an RNAseq mapper of the user's own choice (e.g. Tophat2, Gsnap, STAR2 or HISAT2) as input (i.e. it's portable). It then, analyses and quantifies all splice junctions in the file before, filtering (culling) those which are unlikely to be genuine. Portcullis output's junctions in a variety of formats making it suitable for downstream analysis (such as differential splicing analysis and gene modelling) without additional work. Portcullis can also filter the original BAM file removing alignments associated with bad junctions. @@ -7,3 +11,6 @@ Portcullis stands for PORTable CULLing of Invalid Splice junctions from pre-alig version | versionsuffix | toolchain --------|---------------|---------- ``1.2.2`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PostgreSQL.md b/docs/version-specific/supported-software/p/PostgreSQL.md index 5e7e13ba6..d676ba62e 100644 --- a/docs/version-specific/supported-software/p/PostgreSQL.md +++ b/docs/version-specific/supported-software/p/PostgreSQL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PostgreSQL PostgreSQL is a powerful, open source object-relational database system. It is fully ACID compliant, has full support for foreign keys, joins, views, triggers, and stored procedures (in multiple languages). It includes most SQL:2008 data types, including INTEGER, NUMERIC, BOOLEAN, CHAR, VARCHAR, DATE, INTERVAL, and TIMESTAMP. It also supports storage of binary large objects, including pictures, sounds, or video. It has native programming interfaces for C/C++, Java, .Net, Perl, Python, Ruby, Tcl, ODBC, among others, and exceptional documentation. @@ -27,3 +31,6 @@ version | versionsuffix | toolchain ``9.6.0`` | ``-Python-2.7.12`` | ``intel/2016b`` ``9.6.2`` | ``-Python-2.7.12`` | ``foss/2016b`` ``9.6.2`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Postgres-XL.md b/docs/version-specific/supported-software/p/Postgres-XL.md index eab98e771..dad110cfc 100644 --- a/docs/version-specific/supported-software/p/Postgres-XL.md +++ b/docs/version-specific/supported-software/p/Postgres-XL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Postgres-XL Postgres-XL is a horizontally scalable open source SQL database cluster, flexible enough to handle varying database workloads: @@ -7,3 +11,6 @@ Postgres-XL is a horizontally scalable open source SQL database cluster, flexibl version | versionsuffix | toolchain --------|---------------|---------- ``9.5r1`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Primer3.md b/docs/version-specific/supported-software/p/Primer3.md index 98d42588b..8fcd45ebc 100644 --- a/docs/version-specific/supported-software/p/Primer3.md +++ b/docs/version-specific/supported-software/p/Primer3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Primer3 Primer3 is a widely used program for designing PCR primers (PCR = 'Polymerase Chain Reaction'). PCR is an essential and ubiquitous tool in genetics and molecular biology. Primer3 can also design hybridization probes and sequencing primers. @@ -10,3 +14,6 @@ version | toolchain ``2.4.0`` | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` ``2.4.0`` | ``intel/2018b`` ``2.5.0`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/ProBiS.md b/docs/version-specific/supported-software/p/ProBiS.md index a61516be2..3f9298928 100644 --- a/docs/version-specific/supported-software/p/ProBiS.md +++ b/docs/version-specific/supported-software/p/ProBiS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ProBiS ProBiS algorithm aligns and superimposes complete protein surfaces, surface motifs, or protein binding sites. @@ -7,3 +11,6 @@ ProBiS algorithm aligns and superimposes complete protein surfaces, surface moti version | toolchain --------|---------- ``20230403`` | ``gompi/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/ProFit.md b/docs/version-specific/supported-software/p/ProFit.md index c3b73ddb9..0381c19a2 100644 --- a/docs/version-specific/supported-software/p/ProFit.md +++ b/docs/version-specific/supported-software/p/ProFit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ProFit ProFit (pronounced Pro-Fit, not profit!) is designed to be the ultimate program for performing least squares fits of two or more protein structures. It performs a very simple and basic function, but allows as much flexibility as possible in performing this procedure. Thus one can specify subsets of atoms to be considered, specify zones to be fitted by number, sequence, or by sequence alignment. @@ -7,3 +11,6 @@ ProFit (pronounced Pro-Fit, not profit!) is designed to be the ultimate program version | toolchain --------|---------- ``3.3`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/ProbABEL.md b/docs/version-specific/supported-software/p/ProbABEL.md index 439461ba8..89d912b3c 100644 --- a/docs/version-specific/supported-software/p/ProbABEL.md +++ b/docs/version-specific/supported-software/p/ProbABEL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ProbABEL Tool for genome-wide association analysis of imputed genetic data. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.5.0`` | ``GCCcore/9.3.0`` ``0.5.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/ProjectQ.md b/docs/version-specific/supported-software/p/ProjectQ.md index d1a12b2f5..cd12c8b7a 100644 --- a/docs/version-specific/supported-software/p/ProjectQ.md +++ b/docs/version-specific/supported-software/p/ProjectQ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ProjectQ An open source software framework for quantum computing @@ -7,3 +11,6 @@ An open source software framework for quantum computing version | versionsuffix | toolchain --------|---------------|---------- ``0.4.2`` | ``-Python-3.6.6`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/ProtHint.md b/docs/version-specific/supported-software/p/ProtHint.md index 5c72304fb..429c23748 100644 --- a/docs/version-specific/supported-software/p/ProtHint.md +++ b/docs/version-specific/supported-software/p/ProtHint.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ProtHint ProtHint is a pipeline for predicting and scoring hints (in the form of introns, start and stop codons) in the genome of interest by mapping and spliced aligning predicted genes to a database of reference protein sequences. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.4.0`` | ``-Python-3.7.2`` | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` ``2.4.0`` | ``-Python-3.7.4`` | ``iccifort/2019.5.281`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/ProteinMPNN.md b/docs/version-specific/supported-software/p/ProteinMPNN.md index 9af41463e..9d388da27 100644 --- a/docs/version-specific/supported-software/p/ProteinMPNN.md +++ b/docs/version-specific/supported-software/p/ProteinMPNN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ProteinMPNN A deep learning based protein sequence design method is described that is widely applicable to current design challenges and shows outstanding performance in both in silico and experimental tests. @@ -7,3 +11,6 @@ A deep learning based protein sequence design method is described that is widel version | versionsuffix | toolchain --------|---------------|---------- ``1.0.1-20230627`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Proteinortho.md b/docs/version-specific/supported-software/p/Proteinortho.md index 8bc3eb217..85765b423 100644 --- a/docs/version-specific/supported-software/p/Proteinortho.md +++ b/docs/version-specific/supported-software/p/Proteinortho.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Proteinortho Proteinortho is a tool to detect orthologous genes within different species. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``5.16b`` | ``-Python-3.6.4-Perl-5.26.1`` | ``foss/2018a`` ``6.2.3`` | | ``gompi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PsiCLASS.md b/docs/version-specific/supported-software/p/PsiCLASS.md index a2c10c5a0..d74ab62be 100644 --- a/docs/version-specific/supported-software/p/PsiCLASS.md +++ b/docs/version-specific/supported-software/p/PsiCLASS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PsiCLASS PsiCLASS is a reference-based transcriptome assembler for single or multiple RNA-seq samples. @@ -7,3 +11,6 @@ PsiCLASS is a reference-based transcriptome assembler for single or multiple RNA version | toolchain --------|---------- ``1.0.3`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PuLP.md b/docs/version-specific/supported-software/p/PuLP.md index 6e2a68e97..7455d333b 100644 --- a/docs/version-specific/supported-software/p/PuLP.md +++ b/docs/version-specific/supported-software/p/PuLP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PuLP PuLP is an LP modeler written in Python. PuLP can generate MPS or LP files and call GLPK, COIN-OR CLP/CBC, CPLEX, GUROBI, MOSEK, XPRESS, CHOCO, MIPCL, SCIP to solve linear problems. @@ -9,3 +13,6 @@ version | toolchain ``2.5.1`` | ``foss/2021a`` ``2.7.0`` | ``foss/2022b`` ``2.8.0`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyAEDT.md b/docs/version-specific/supported-software/p/PyAEDT.md index 74d03149f..b1d96c424 100644 --- a/docs/version-specific/supported-software/p/PyAEDT.md +++ b/docs/version-specific/supported-software/p/PyAEDT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyAEDT PyAEDT is a Python library that interacts directly with the Ansys Electronics Desktop (AEDT) API, enabling straightforward and efficient automation in your workflow. @@ -7,3 +11,6 @@ PyAEDT is a Python library that interacts directly with the Ansys Electronics De version | toolchain --------|---------- ``0.8.7`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyAMG.md b/docs/version-specific/supported-software/p/PyAMG.md index 5a40f2543..ff716f025 100644 --- a/docs/version-specific/supported-software/p/PyAMG.md +++ b/docs/version-specific/supported-software/p/PyAMG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyAMG PyAMG is a library of Algebraic Multigrid (AMG) solvers with a convenient Python interface. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``4.0.0`` | | ``intel/2020b`` ``4.2.3`` | | ``foss/2021a`` ``5.1.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyAPS3.md b/docs/version-specific/supported-software/p/PyAPS3.md index 503cadd8b..3b34d48fb 100644 --- a/docs/version-specific/supported-software/p/PyAPS3.md +++ b/docs/version-specific/supported-software/p/PyAPS3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyAPS3 Python 3 Atmospheric Phase Screen @@ -7,3 +11,6 @@ Python 3 Atmospheric Phase Screen version | versionsuffix | toolchain --------|---------------|---------- ``20190407`` | ``-Python-3.7.2`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyAV.md b/docs/version-specific/supported-software/p/PyAV.md index a780690b7..fa223241e 100644 --- a/docs/version-specific/supported-software/p/PyAV.md +++ b/docs/version-specific/supported-software/p/PyAV.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyAV PyAV is a Pythonic binding for FFmpeg. We aim to provide all of the power and control of the underlying library, but manage the gritty details as much as possible. @@ -7,3 +11,6 @@ PyAV is a Pythonic binding for FFmpeg. We aim to provide all of the power and co version | toolchain --------|---------- ``10.0.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyBerny.md b/docs/version-specific/supported-software/p/PyBerny.md index af8a72aa2..d6445d8c3 100644 --- a/docs/version-specific/supported-software/p/PyBerny.md +++ b/docs/version-specific/supported-software/p/PyBerny.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyBerny PyBerny is an optimizer of molecular geometries with respect to the total energy, using nuclear gradient information. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.6.2`` | ``-Python-3.8.2`` | ``intel/2020a`` ``0.6.3`` | | ``foss/2022a`` ``0.6.3`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyBioLib.md b/docs/version-specific/supported-software/p/PyBioLib.md index dfd3a64fd..8d1f2fbf1 100644 --- a/docs/version-specific/supported-software/p/PyBioLib.md +++ b/docs/version-specific/supported-software/p/PyBioLib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyBioLib PyBioLib is a Python package for running BioLib applications from Python scripts and the command line. BioLib is a library of biological data science applications. Applications on BioLib range from small bioinformatics utilities to state-of-the-art machine learning algorithms for predicting characteristics of biological molecules. @@ -7,3 +11,6 @@ PyBioLib is a Python package for running BioLib applications from Python scripts version | toolchain --------|---------- ``1.1.988`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyCUDA.md b/docs/version-specific/supported-software/p/PyCUDA.md index cda0aeb46..a6f6040aa 100644 --- a/docs/version-specific/supported-software/p/PyCUDA.md +++ b/docs/version-specific/supported-software/p/PyCUDA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyCUDA PyCUDA lets you access Nvidia’s CUDA parallel computation API from Python. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``2019.1.2`` | ``-Python-3.7.4`` | ``fosscuda/2019b`` ``2019.1.2`` | ``-Python-3.7.4`` | ``intelcuda/2019b`` ``2020.1`` | | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyCairo.md b/docs/version-specific/supported-software/p/PyCairo.md index 0b6c5ef5b..19fad288f 100644 --- a/docs/version-specific/supported-software/p/PyCairo.md +++ b/docs/version-specific/supported-software/p/PyCairo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyCairo Python bindings for the cairo library @@ -22,3 +26,6 @@ version | versionsuffix | toolchain ``1.24.0`` | | ``GCCcore/12.2.0`` ``1.25.0`` | | ``GCCcore/12.3.0`` ``1.25.1`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyCalib.md b/docs/version-specific/supported-software/p/PyCalib.md index 438a05547..9c6279fe9 100644 --- a/docs/version-specific/supported-software/p/PyCalib.md +++ b/docs/version-specific/supported-software/p/PyCalib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyCalib Python library for classifier calibration @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.1.0.dev0`` | ``foss/2021b`` ``20230531`` | ``gfbf/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyCharm.md b/docs/version-specific/supported-software/p/PyCharm.md index 27cd4f8eb..da8c2f083 100644 --- a/docs/version-specific/supported-software/p/PyCharm.md +++ b/docs/version-specific/supported-software/p/PyCharm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyCharm PyCharm Community Edition: Python IDE for Professional Developers @@ -11,3 +15,6 @@ version | toolchain ``2021.1.1`` | ``system`` ``2022.2.2`` | ``system`` ``2022.3.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyCheMPS2.md b/docs/version-specific/supported-software/p/PyCheMPS2.md index f3fe63213..260e153fe 100644 --- a/docs/version-specific/supported-software/p/PyCheMPS2.md +++ b/docs/version-specific/supported-software/p/PyCheMPS2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyCheMPS2 PyCheMPS2 is a python interface to CheMPS2, for compilation without MPI. CheMPS2 is a scientific library which contains a spin-adapted implementation of the density matrix renormalization group (DMRG) for ab initio quantum chemistry. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.8.12`` | ``foss/2022a`` ``1.8.12`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyCifRW.md b/docs/version-specific/supported-software/p/PyCifRW.md index e0fdc2531..2f9200f62 100644 --- a/docs/version-specific/supported-software/p/PyCifRW.md +++ b/docs/version-specific/supported-software/p/PyCifRW.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyCifRW PyCIFRW provides support for reading and writing CIF (Crystallographic Information Format) files using Python. @@ -7,3 +11,6 @@ PyCIFRW provides support for reading and writing CIF (Crystallographic Informati version | toolchain --------|---------- ``4.4.2`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyClone.md b/docs/version-specific/supported-software/p/PyClone.md index c0b087210..aa6305129 100644 --- a/docs/version-specific/supported-software/p/PyClone.md +++ b/docs/version-specific/supported-software/p/PyClone.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyClone PyClone is a Python package that wraps rclone and provides a threaded interface for an installation at the host or container level. @@ -7,3 +11,6 @@ PyClone is a Python package that wraps rclone and provides a threaded interface version | toolchain --------|---------- ``2020.9b2`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyCogent.md b/docs/version-specific/supported-software/p/PyCogent.md index dd0fe0741..35d36b0d5 100644 --- a/docs/version-specific/supported-software/p/PyCogent.md +++ b/docs/version-specific/supported-software/p/PyCogent.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyCogent PyCogent is a software library for genomic biology. It is a fully integrated and thoroughly tested framework for: controlling third-party applications; devising workflows; querying databases; conducting novel probabilistic analyses of biological sequence evolution; and generating publication quality graphics. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.9`` | ``-Python-2.7.12`` | ``foss/2016b`` ``1.9`` | ``-Python-2.7.15`` | ``foss/2018b`` ``1.9`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyDamage.md b/docs/version-specific/supported-software/p/PyDamage.md index 086942d51..4551c60aa 100644 --- a/docs/version-specific/supported-software/p/PyDamage.md +++ b/docs/version-specific/supported-software/p/PyDamage.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyDamage Pydamage, is a Python software to automate the process of contig damage identification and estimation. After modelling the ancient DNA damage using the C to T transitions, Pydamage uses a likelihood ratio test to discriminate between truly ancient, and modern contigs originating from sample contamination. @@ -7,3 +11,6 @@ Pydamage, is a Python software to automate the process of contig damage identifi version | toolchain --------|---------- ``0.70`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyDatastream.md b/docs/version-specific/supported-software/p/PyDatastream.md index ec873b8d1..fe54ab3c1 100644 --- a/docs/version-specific/supported-software/p/PyDatastream.md +++ b/docs/version-specific/supported-software/p/PyDatastream.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyDatastream Lightweight SOAP client @@ -7,3 +11,6 @@ Lightweight SOAP client version | versionsuffix | toolchain --------|---------------|---------- ``0.5.1`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyEVTK.md b/docs/version-specific/supported-software/p/PyEVTK.md index 7e4ea5171..1be0a21bc 100644 --- a/docs/version-specific/supported-software/p/PyEVTK.md +++ b/docs/version-specific/supported-software/p/PyEVTK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyEVTK PyEVTK (Python Export VTK) exports data to binary VTK files for visualization/analysis with packages like Paraview, VisIt, and Mayavii. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.4.1`` | ``foss/2021b`` ``2.0.0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyEXR.md b/docs/version-specific/supported-software/p/PyEXR.md index f94a9fa54..0d015b078 100644 --- a/docs/version-specific/supported-software/p/PyEXR.md +++ b/docs/version-specific/supported-software/p/PyEXR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyEXR A simple EXR IO-library for Python that simplifies the use of OpenEXR. @@ -7,3 +11,6 @@ A simple EXR IO-library for Python that simplifies the use of OpenEXR. version | toolchain --------|---------- ``0.3.10`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyFFmpeg.md b/docs/version-specific/supported-software/p/PyFFmpeg.md index dea790620..947507516 100644 --- a/docs/version-specific/supported-software/p/PyFFmpeg.md +++ b/docs/version-specific/supported-software/p/PyFFmpeg.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyFFmpeg Python FFmpeg wrapper @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.1beta`` | ``-Python-2.7.10`` | ``gimkl/2.11.5`` ``2.1beta`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyFMI.md b/docs/version-specific/supported-software/p/PyFMI.md index 42a2d365b..3e129b5b4 100644 --- a/docs/version-specific/supported-software/p/PyFMI.md +++ b/docs/version-specific/supported-software/p/PyFMI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyFMI PyFMI is a package for loading and interacting with Functional Mock-Up Units (FMUs), which are compiled dynamic models compliant with the Functional Mock-Up Interface (FMI) @@ -7,3 +11,6 @@ PyFMI is a package for loading and interacting with Functional Mock-Up Units (FM version | versionsuffix | toolchain --------|---------------|---------- ``2.4.0`` | ``-Python-2.7.15`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyFR.md b/docs/version-specific/supported-software/p/PyFR.md index 4d78385b1..12f7c0fd1 100644 --- a/docs/version-specific/supported-software/p/PyFR.md +++ b/docs/version-specific/supported-software/p/PyFR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyFR PyFR is an open-source Python based framework for solving advection-diffusion type problems on streaming architectures using the Flux Reconstruction approach of Huynh. The framework is designed to solve a range of governing systems on mixed unstructured grids containing various element types. It is also designed to target a range of hardware platforms via use of an in-built domain specific language derived from the Mako templating engine. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.7.6`` | ``-Python-3.6.4-CUDA-9.1.85`` | ``intel/2018a`` ``1.9.0`` | ``-Python-3.7.4`` | ``intelcuda/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyFoam.md b/docs/version-specific/supported-software/p/PyFoam.md index 412f27261..70f5b45d9 100644 --- a/docs/version-specific/supported-software/p/PyFoam.md +++ b/docs/version-specific/supported-software/p/PyFoam.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyFoam A Python library to control OpenFOAM-runs and manipulate OpenFOAM-data. @@ -7,3 +11,6 @@ A Python library to control OpenFOAM-runs and manipulate OpenFOAM-data. version | toolchain --------|---------- ``2020.5`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyFrag.md b/docs/version-specific/supported-software/p/PyFrag.md index bd61b1615..8640121a0 100644 --- a/docs/version-specific/supported-software/p/PyFrag.md +++ b/docs/version-specific/supported-software/p/PyFrag.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyFrag PyFrag 2019 resolves three main challenges associated with the automatized computational exploration of reaction mechanisms: 1) the management of multiple parallel calculations to automatically find a reaction path; 2) the monitoring of the entire computational process along with the extraction and plotting of relevant information from large amounts of data; and 3) the analysis and presentation of these data in a clear and informative way. This module provides the Activation Strain Analysis (ASA) Module of PyFrag 2019 @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2019-20220216`` | ``-ASA`` | ``intel/2020b`` ``2023-dev.20240220`` | ``-ASA`` | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyGEOS.md b/docs/version-specific/supported-software/p/PyGEOS.md index 1cfedf8fc..8b7abf939 100644 --- a/docs/version-specific/supported-software/p/PyGEOS.md +++ b/docs/version-specific/supported-software/p/PyGEOS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyGEOS PyGEOS is a C/Python library with vectorized geometry functions. The geometry operations are done in the open-source geometry library GEOS. PyGEOS wraps these operations in NumPy ufuncs providing a performance improvement when operating on arrays of geometries. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.14`` | | ``gfbf/2023a`` ``0.7.1`` | ``-Python-3.7.4`` | ``foss/2019b`` ``0.8`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyGObject.md b/docs/version-specific/supported-software/p/PyGObject.md index d8be4f433..4362b6444 100644 --- a/docs/version-specific/supported-software/p/PyGObject.md +++ b/docs/version-specific/supported-software/p/PyGObject.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyGObject Python Bindings for GLib/GObject/GIO/GTK+ @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``3.44.1`` | | ``GCCcore/12.2.0`` ``3.46.0`` | | ``GCCcore/12.3.0`` ``3.46.0`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyGTK.md b/docs/version-specific/supported-software/p/PyGTK.md index d134d1803..92d7658e3 100644 --- a/docs/version-specific/supported-software/p/PyGTK.md +++ b/docs/version-specific/supported-software/p/PyGTK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyGTK PyGTK lets you to easily create programs with a graphical user interface using the Python programming language. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.24.0`` | ``-Python-2.7.11`` | ``intel/2016a`` ``2.24.0`` | ``-Python-2.7.14`` | ``intel/2017b`` ``2.24.0`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyGTS.md b/docs/version-specific/supported-software/p/PyGTS.md index 56ddf83f3..97e73762a 100644 --- a/docs/version-specific/supported-software/p/PyGTS.md +++ b/docs/version-specific/supported-software/p/PyGTS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyGTS PyGTS is a python package used to construct, manipulate, and perform computations on triangulated surfaces. It is a hand-crafted and pythonic binding for the GNU Triangulated Surface (GTS) Library. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.3.1`` | ``-Python-2.7.11`` | ``intel/2016a`` ``0.3.1`` | ``-Python-2.7.12`` | ``intel/2016b`` ``0.3.1`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyGWAS.md b/docs/version-specific/supported-software/p/PyGWAS.md index ee7bd0aee..69a6fc24d 100644 --- a/docs/version-specific/supported-software/p/PyGWAS.md +++ b/docs/version-specific/supported-software/p/PyGWAS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyGWAS PyGWAS is a library for running Genome Wide Association studies. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``1.6.1`` | ``-Python-2.7.11`` | ``foss/2016a`` ``1.6.1`` | ``-Python-2.7.11`` | ``intel/2016a`` ``1.7.1`` | ``-Python-2.7.13`` | ``foss/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyHMMER.md b/docs/version-specific/supported-software/p/PyHMMER.md index 4c67be775..c53a4ab67 100644 --- a/docs/version-specific/supported-software/p/PyHMMER.md +++ b/docs/version-specific/supported-software/p/PyHMMER.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyHMMER HMMER is a biological sequence analysis tool that uses profile hidden Markov models to search for sequence homologs. HMMER3 is developed and maintained by the Eddy/Rivas Laboratory at Harvard University. pyhmmer is a Python package, implemented using the Cython language, that provides bindings to HMMER3. It directly interacts with the HMMER internals, which has the following advantages over CLI wrappers (like hmmer-py) @@ -7,3 +11,6 @@ HMMER is a biological sequence analysis tool that uses profile hidden Markov version | toolchain --------|---------- ``0.10.6`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyImageJ.md b/docs/version-specific/supported-software/p/PyImageJ.md index 39de32bd9..cfef5e573 100644 --- a/docs/version-specific/supported-software/p/PyImageJ.md +++ b/docs/version-specific/supported-software/p/PyImageJ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyImageJ PyImageJ provides a set of wrapper functions for integration between ImageJ2 and Python. It also supports the original ImageJ API and data structures. A major advantage of this approach is the ability to combine ImageJ and ImageJ2 with other tools available from the Python software ecosystem, including NumPy, SciPy, scikit-image, CellProfiler, OpenCV, ITK and many more. @@ -7,3 +11,6 @@ PyImageJ provides a set of wrapper functions for integration between ImageJ2 and version | toolchain --------|---------- ``1.3.1`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyInstaller.md b/docs/version-specific/supported-software/p/PyInstaller.md index 0a171266a..bc5548d98 100644 --- a/docs/version-specific/supported-software/p/PyInstaller.md +++ b/docs/version-specific/supported-software/p/PyInstaller.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyInstaller PyInstaller bundles a Python application and all its dependencies into a single package. The user can run the packaged app without installing a Python interpreter or any modules. @@ -7,3 +11,6 @@ PyInstaller bundles a Python application and all its dependencies into a single version | toolchain --------|---------- ``6.3.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyMC.md b/docs/version-specific/supported-software/p/PyMC.md index c5e358030..82d4afffe 100644 --- a/docs/version-specific/supported-software/p/PyMC.md +++ b/docs/version-specific/supported-software/p/PyMC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyMC PyMC is a probabilistic programming library for Python that allows users to build Bayesian models with a simple Python API and fit them using Markov chain Monte Carlo (MCMC) methods. @@ -9,3 +13,6 @@ version | toolchain ``2.3.8`` | ``foss/2021b`` ``2.3.8`` | ``intel/2021b`` ``5.9.0`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyMC3.md b/docs/version-specific/supported-software/p/PyMC3.md index 54e98f74b..93822a493 100644 --- a/docs/version-specific/supported-software/p/PyMC3.md +++ b/docs/version-specific/supported-software/p/PyMC3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyMC3 Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``3.11.1`` | | ``intel/2021b`` ``3.8`` | ``-Python-3.7.4`` | ``foss/2019b`` ``3.8`` | ``-Python-3.7.4`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyMOL.md b/docs/version-specific/supported-software/p/PyMOL.md index 5dcfcb612..e35ab3e03 100644 --- a/docs/version-specific/supported-software/p/PyMOL.md +++ b/docs/version-specific/supported-software/p/PyMOL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyMOL PyMOL is a Python-enhanced molecular graphics tool. It excels at 3D visualization of proteins, small molecules, density, surfaces, and trajectories. It also includes molecular editing, ray tracing, and movies. Open Source PyMOL is free to everyone! @@ -7,3 +11,6 @@ PyMOL is a Python-enhanced molecular graphics tool. It excels at 3D version | toolchain --------|---------- ``2.5.0`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyNAST.md b/docs/version-specific/supported-software/p/PyNAST.md index 9f144bf9d..80d1f8033 100644 --- a/docs/version-specific/supported-software/p/PyNAST.md +++ b/docs/version-specific/supported-software/p/PyNAST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyNAST PyNAST is a reimplementation of the NAST sequence aligner, which has become a popular tool for adding new 16s rRNA sequences to existing 16s rRNA alignments. This reimplementation is more flexible, faster, and easier to install and maintain than the original NAST implementation. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.2.2`` | ``-Python-2.7.12`` | ``foss/2016b`` ``1.2.2`` | ``-Python-2.7.15`` | ``foss/2018b`` ``1.2.2`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyOD.md b/docs/version-specific/supported-software/p/PyOD.md index ed4887396..760821f15 100644 --- a/docs/version-specific/supported-software/p/PyOD.md +++ b/docs/version-specific/supported-software/p/PyOD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyOD PyOD is a comprehensive and scalable Python toolkit for detecting outlying objects in multivariate data. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.8.7`` | ``foss/2020b`` ``0.8.7`` | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyOpenCL.md b/docs/version-specific/supported-software/p/PyOpenCL.md index 687de8abb..89beb20f9 100644 --- a/docs/version-specific/supported-software/p/PyOpenCL.md +++ b/docs/version-specific/supported-software/p/PyOpenCL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyOpenCL PyOpenCL lets you access GPUs and other massively parallel compute devices from Python. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``2023.1.4`` | | ``foss/2022a`` ``2023.1.4`` | ``-CUDA-12.1.1`` | ``foss/2023a`` ``2023.1.4`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyOpenGL.md b/docs/version-specific/supported-software/p/PyOpenGL.md index 1c20e0c62..4cfceaf6b 100644 --- a/docs/version-specific/supported-software/p/PyOpenGL.md +++ b/docs/version-specific/supported-software/p/PyOpenGL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyOpenGL PyOpenGL is the most common cross platform Python binding to OpenGL and related APIs. @@ -19,3 +23,6 @@ version | versionsuffix | toolchain ``3.1.6`` | | ``GCCcore/11.2.0`` ``3.1.6`` | | ``GCCcore/11.3.0`` ``3.1.7`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyPSA.md b/docs/version-specific/supported-software/p/PyPSA.md index 4fb8c1607..b60f43331 100644 --- a/docs/version-specific/supported-software/p/PyPSA.md +++ b/docs/version-specific/supported-software/p/PyPSA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyPSA PyPSA is an open source toolbox for simulating and optimising modern power systems that include features such as conventional generators with unit commitment, variable wind and solar generation, storage units, coupling to other energy sectors, and mixed alternating and direct current networks. PyPSA is designed to scale well with large networks and long time series. @@ -7,3 +11,6 @@ PyPSA is an open source toolbox for simulating and optimising modern power syste version | toolchain --------|---------- ``0.17.1`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyPy.md b/docs/version-specific/supported-software/p/PyPy.md index 552c87794..1d1ec86c4 100644 --- a/docs/version-specific/supported-software/p/PyPy.md +++ b/docs/version-specific/supported-software/p/PyPy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyPy A fast, compliant alternative implementation of Python @@ -7,3 +11,6 @@ A fast, compliant alternative implementation of Python version | versionsuffix | toolchain --------|---------------|---------- ``7.3.12`` | ``-3.10`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyQt-builder.md b/docs/version-specific/supported-software/p/PyQt-builder.md index c170d6793..fd0114b89 100644 --- a/docs/version-specific/supported-software/p/PyQt-builder.md +++ b/docs/version-specific/supported-software/p/PyQt-builder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyQt-builder PyQt-builder is the PEP 517 compliant build system for PyQt and projects that extend PyQt. It extends the SIP build system and uses Qt’s qmake to perform the actual compilation and installation of extension modules. @@ -7,3 +11,6 @@ PyQt-builder is the PEP 517 compliant build system for PyQt and projects that version | toolchain --------|---------- ``1.15.4`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyQt.md b/docs/version-specific/supported-software/p/PyQt.md index 5895abfa0..6d804dc56 100644 --- a/docs/version-specific/supported-software/p/PyQt.md +++ b/docs/version-specific/supported-software/p/PyQt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyQt PyQt is a set of Python v2 and v3 bindings for Digia's Qt application framework. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``4.12`` | ``-Python-2.7.13`` | ``intel/2017a`` ``4.12.1`` | ``-Python-2.7.14`` | ``foss/2018a`` ``4.12.3`` | ``-Python-2.7.15`` | ``fosscuda/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyQt5.md b/docs/version-specific/supported-software/p/PyQt5.md index 29d61f56e..eb2380177 100644 --- a/docs/version-specific/supported-software/p/PyQt5.md +++ b/docs/version-specific/supported-software/p/PyQt5.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyQt5 PyQt5 is a set of Python bindings for v5 of the Qt application framework from The Qt Company. @@ -27,3 +31,6 @@ version | versionsuffix | toolchain ``5.9.2`` | ``-Python-2.7.14`` | ``intel/2017b`` ``5.9.2`` | ``-Python-2.7.14`` | ``intel/2018a`` ``5.9.2`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyQtGraph.md b/docs/version-specific/supported-software/p/PyQtGraph.md index b08eeabf9..53b92dd70 100644 --- a/docs/version-specific/supported-software/p/PyQtGraph.md +++ b/docs/version-specific/supported-software/p/PyQtGraph.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyQtGraph PyQtGraph is a pure-python graphics and GUI library built on PyQt4/PySide and numpy. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``0.12.3`` | | ``foss/2021a`` ``0.13.3`` | | ``foss/2022a`` ``0.13.7`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyRETIS.md b/docs/version-specific/supported-software/p/PyRETIS.md index 36b13e6e3..6decf420b 100644 --- a/docs/version-specific/supported-software/p/PyRETIS.md +++ b/docs/version-specific/supported-software/p/PyRETIS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyRETIS PyRETIS is a Python library for rare event molecular simulations with emphasis on methods based on transition interface sampling and replica exchange transition interface sampling. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``2.5.0`` | | ``foss/2020b`` ``2.5.0`` | ``-Python-3.8.2`` | ``intel/2020a`` ``2.5.0`` | | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyRe.md b/docs/version-specific/supported-software/p/PyRe.md index f93c36cfe..1d47b6f9d 100644 --- a/docs/version-specific/supported-software/p/PyRe.md +++ b/docs/version-specific/supported-software/p/PyRe.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyRe PyRe (Python Reliability) is a Python module for structural reliability analysis. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``5.0.3-20190221`` | ``-Python-3.7.4`` | ``foss/2019b`` ``5.0.3-20190221`` | ``-Python-3.7.4`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyRosetta.md b/docs/version-specific/supported-software/p/PyRosetta.md index 825fa71f6..0d403a6d0 100644 --- a/docs/version-specific/supported-software/p/PyRosetta.md +++ b/docs/version-specific/supported-software/p/PyRosetta.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyRosetta PyRosetta is an interactive Python-based interface to the powerful Rosetta molecular modeling suite. It enables users to design their own custom molecular modeling algorithms using Rosetta sampling methods and energy functions. @@ -7,3 +11,6 @@ PyRosetta is an interactive Python-based interface to the powerful Rosetta molec version | versionsuffix | toolchain --------|---------------|---------- ``4.release-292`` | ``-Python-3.7.4`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PySAT.md b/docs/version-specific/supported-software/p/PySAT.md index 5e181f349..a99aa6db6 100644 --- a/docs/version-specific/supported-software/p/PySAT.md +++ b/docs/version-specific/supported-software/p/PySAT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PySAT PySAT is a Python toolkit, which aims at providing a simple and unified interface to a number of state-of-art Boolean satisfiability (SAT) solvers as well as to a variety of cardinality and pseudo-Boolean encodings. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.1.6.dev11`` | ``-Python-3.8.2`` | ``GCC/9.3.0`` ``0.1.7.dev1`` | | ``GCC/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PySCF.md b/docs/version-specific/supported-software/p/PySCF.md index fdb1fa243..6ceca0e7f 100644 --- a/docs/version-specific/supported-software/p/PySCF.md +++ b/docs/version-specific/supported-software/p/PySCF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PySCF PySCF is an open-source collection of electronic structure modules powered by Python. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``1.7.6`` | | ``gomkl/2021a`` ``2.1.1`` | | ``foss/2022a`` ``2.4.0`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PySINDy.md b/docs/version-specific/supported-software/p/PySINDy.md index 567526b42..179121d42 100644 --- a/docs/version-specific/supported-software/p/PySINDy.md +++ b/docs/version-specific/supported-software/p/PySINDy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PySINDy " PySINDy is a sparse regression package with several implementations for the Sparse Identification of Nonlinear Dynamical systems (SINDy) method introduced in Brunton et al. (2016a), including the unified optimization approach of Champion et al. (2019), SINDy with control from Brunton et al. (2016b), Trapping SINDy from Kaptanoglu et al. (2021), SINDy-PI from Kaheman et al. (2020), PDE-FIND from Rudy et al. (2017), and so on. A comprehensive literature review is given in de Silva et al. (2020) and Kaptanoglu, de Silva et al. (2021). @@ -7,3 +11,6 @@ version | toolchain --------|---------- ``1.7.3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PySide2.md b/docs/version-specific/supported-software/p/PySide2.md index 388971053..4da452919 100644 --- a/docs/version-specific/supported-software/p/PySide2.md +++ b/docs/version-specific/supported-software/p/PySide2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PySide2 PySide2 is the official Python module from the Qt for Python project, which provides access to the complete Qt 5.12+ framework. @@ -7,3 +11,6 @@ PySide2 is the official Python module from the Qt for Python project, which version | toolchain --------|---------- ``5.14.2.3`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyStan.md b/docs/version-specific/supported-software/p/PyStan.md index 8797cbb8e..234b51bbe 100644 --- a/docs/version-specific/supported-software/p/PyStan.md +++ b/docs/version-specific/supported-software/p/PyStan.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyStan Python interface to Stan, a package for Bayesian inference using the No-U-Turn sampler, a variant of Hamiltonian Monte Carlo. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.19.1.1`` | | ``foss/2020b`` ``2.19.1.1`` | | ``intel/2020b`` ``3.5.0`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyTables.md b/docs/version-specific/supported-software/p/PyTables.md index c88272dee..8e59edb94 100644 --- a/docs/version-specific/supported-software/p/PyTables.md +++ b/docs/version-specific/supported-software/p/PyTables.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyTables PyTables is a package for managing hierarchical datasets and designed to efficiently and easily cope with extremely large amounts of data. PyTables is built on top of the HDF5 library, using the Python language and the NumPy package. It features an object-oriented interface that, combined with C extensions for the performance-critical parts of the code (generated using Cython), makes it a fast, yet extremely easy to use tool for interactively browse, process and search very large amounts of data. One important feature of PyTables is that it optimizes memory and disk resources so that data takes much less space (specially if on-flight compression is used) than other solutions such as relational or object oriented databases. @@ -38,3 +42,6 @@ version | versionsuffix | toolchain ``3.8.0`` | | ``foss/2022b`` ``3.8.0`` | | ``foss/2023a`` ``3.9.2`` | | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyTensor.md b/docs/version-specific/supported-software/p/PyTensor.md index f3ca99712..54ce2c8dd 100644 --- a/docs/version-specific/supported-software/p/PyTensor.md +++ b/docs/version-specific/supported-software/p/PyTensor.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyTensor Optimizing compiler for evaluating mathematical expressions on CPUs and GPUs @@ -7,3 +11,6 @@ Optimizing compiler for evaluating mathematical expressions on CPUs and GPUs version | toolchain --------|---------- ``2.17.1`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyTorch-Geometric.md b/docs/version-specific/supported-software/p/PyTorch-Geometric.md index f4ad72c5d..5fad74ddc 100644 --- a/docs/version-specific/supported-software/p/PyTorch-Geometric.md +++ b/docs/version-specific/supported-software/p/PyTorch-Geometric.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyTorch-Geometric PyTorch Geometric (PyG) is a geometric deep learning extension library for PyTorch. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``2.1.0`` | ``-PyTorch-1.12.0-CUDA-11.7.0`` | ``foss/2022a`` ``2.1.0`` | ``-PyTorch-1.12.0`` | ``foss/2022a`` ``2.5.0`` | ``-PyTorch-2.1.2-CUDA-12.1.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyTorch-Ignite.md b/docs/version-specific/supported-software/p/PyTorch-Ignite.md index d4dda960f..7d86e58f9 100644 --- a/docs/version-specific/supported-software/p/PyTorch-Ignite.md +++ b/docs/version-specific/supported-software/p/PyTorch-Ignite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyTorch-Ignite Ignite is a high-level library to help with training and evaluating neural networks in PyTorch flexibly and transparently. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.4.12`` | | ``foss/2022a`` ``0.4.13`` | | ``foss/2023a`` ``0.4.9`` | ``-CUDA-11.3.1`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyTorch-Image-Models.md b/docs/version-specific/supported-software/p/PyTorch-Image-Models.md index df2000e66..d1aea7b6c 100644 --- a/docs/version-specific/supported-software/p/PyTorch-Image-Models.md +++ b/docs/version-specific/supported-software/p/PyTorch-Image-Models.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyTorch-Image-Models PyTorch Image Models (timm) is a collection of image models, layers, utilities, optimizers, schedulers, data-loaders / augmentations, and reference training / validation scripts that aim to pull together a wide variety of SOTA models with ability to reproduce ImageNet training results. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.9.2`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.9.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyTorch-Lightning.md b/docs/version-specific/supported-software/p/PyTorch-Lightning.md index 4aa69247f..92a8c0120 100644 --- a/docs/version-specific/supported-software/p/PyTorch-Lightning.md +++ b/docs/version-specific/supported-software/p/PyTorch-Lightning.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyTorch-Lightning PyTorch Lightning is the lightweight PyTorch wrapper for ML researchers. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``2.1.2`` | | ``foss/2022b`` ``2.2.1`` | ``-CUDA-12.1.1`` | ``foss/2023a`` ``2.2.1`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyTorch-bundle.md b/docs/version-specific/supported-software/p/PyTorch-bundle.md index 2c09c78d3..123f67160 100644 --- a/docs/version-specific/supported-software/p/PyTorch-bundle.md +++ b/docs/version-specific/supported-software/p/PyTorch-bundle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyTorch-bundle PyTorch with compatible versions of official Torch extensions. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.13.1`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``2.1.2`` | ``-CUDA-12.1.1`` | ``foss/2023a`` ``2.1.2`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyTorch.md b/docs/version-specific/supported-software/p/PyTorch.md index b939ffe80..bdc0b7bd7 100644 --- a/docs/version-specific/supported-software/p/PyTorch.md +++ b/docs/version-specific/supported-software/p/PyTorch.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyTorch Tensors and Dynamic neural networks in Python with strong GPU acceleration. PyTorch is a deep learning framework that puts Python first. @@ -57,3 +61,6 @@ version | versionsuffix | toolchain ``2.1.2`` | ``-CUDA-12.1.1`` | ``foss/2023a`` ``2.1.2`` | | ``foss/2023a`` ``2.1.2`` | | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyTorch3D.md b/docs/version-specific/supported-software/p/PyTorch3D.md index bac4ab8b3..ba76b8980 100644 --- a/docs/version-specific/supported-software/p/PyTorch3D.md +++ b/docs/version-specific/supported-software/p/PyTorch3D.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyTorch3D PyTorch3D is FAIR's library of reusable components for deep learning with 3D data. @@ -7,3 +11,6 @@ PyTorch3D is FAIR's library of reusable components for deep learning with 3D dat version | versionsuffix | toolchain --------|---------------|---------- ``0.4.0`` | ``-PyTorch-1.7.1`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyTorchVideo.md b/docs/version-specific/supported-software/p/PyTorchVideo.md index 1970e8218..ff7d4177f 100644 --- a/docs/version-specific/supported-software/p/PyTorchVideo.md +++ b/docs/version-specific/supported-software/p/PyTorchVideo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyTorchVideo PyTorchVideo is a deeplearning library with a focus on video understanding work. PytorchVideo provides reusable, modular and efficient components needed to accelerate the video understanding research. PyTorchVideo is developed using PyTorch and supports different deeplearning video components like video models, video datasets, and video-specific transforms. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.1.5`` | ``-PyTorch-1.12.0-CUDA-11.7.0`` | ``foss/2022a`` ``0.1.5`` | ``-PyTorch-1.12.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyVCF.md b/docs/version-specific/supported-software/p/PyVCF.md index 5a450a2b4..92a07a2f7 100644 --- a/docs/version-specific/supported-software/p/PyVCF.md +++ b/docs/version-specific/supported-software/p/PyVCF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyVCF A Variant Call Format reader for Python. @@ -7,3 +11,6 @@ A Variant Call Format reader for Python. version | versionsuffix | toolchain --------|---------------|---------- ``0.6.8`` | ``-Python-2.7.16`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyVCF3.md b/docs/version-specific/supported-software/p/PyVCF3.md index fe9ff6fa0..b108630f1 100644 --- a/docs/version-specific/supported-software/p/PyVCF3.md +++ b/docs/version-specific/supported-software/p/PyVCF3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyVCF3 A VCFv4.0 and 4.1 parser for Python. The intent of this module is to mimic the csv module in the Python stdlib, as opposed to more flexible serialization formats like JSON or YAML. vcf will attempt to parse the content of each record based on the data types specified in the meta-information lines -- specifically the ##INFO and ##FORMAT lines. If these lines are missing or incomplete, it will check against the reserved types mentioned in the spec. Failing that, it will just return strings. PyVCF3 has been created because the Official PyVCF repository is no longer maintained and do not accept any pull requests. This fork is for python 3 only and has been published on pyPI as PyVCF3. @@ -7,3 +11,6 @@ A VCFv4.0 and 4.1 parser for Python. The intent of this module is to mimic the c version | toolchain --------|---------- ``1.0.3`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyVista.md b/docs/version-specific/supported-software/p/PyVista.md index 64d5ab2a9..e23b4965d 100644 --- a/docs/version-specific/supported-software/p/PyVista.md +++ b/docs/version-specific/supported-software/p/PyVista.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyVista 3D plotting and mesh analysis through a streamlined interface for the Visualization Toolkit (VTK) @@ -7,3 +11,6 @@ version | toolchain --------|---------- ``0.43.8`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyWBGT.md b/docs/version-specific/supported-software/p/PyWBGT.md index f999290ad..7769350d4 100644 --- a/docs/version-specific/supported-software/p/PyWBGT.md +++ b/docs/version-specific/supported-software/p/PyWBGT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyWBGT Cython source code for estimating wet bulb globe temperature (WBGT) from datasets of standard meterological measurements using models developed by Liljegren et al (2008) @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.0`` | ``foss/2021b`` ``1.0.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyWavelets.md b/docs/version-specific/supported-software/p/PyWavelets.md index 3f22f381c..5fe82d0f4 100644 --- a/docs/version-specific/supported-software/p/PyWavelets.md +++ b/docs/version-specific/supported-software/p/PyWavelets.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyWavelets PyWavelets is open source wavelet transform software for Python. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.1.1`` | ``-Python-3.7.4`` | ``intel/2019b`` ``1.1.1`` | | ``intelcuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyYAML.md b/docs/version-specific/supported-software/p/PyYAML.md index 8f1633793..cdeb30746 100644 --- a/docs/version-specific/supported-software/p/PyYAML.md +++ b/docs/version-specific/supported-software/p/PyYAML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyYAML PyYAML is a YAML parser and emitter for the Python programming language. @@ -40,3 +44,6 @@ version | versionsuffix | toolchain ``6.0`` | | ``GCCcore/12.2.0`` ``6.0`` | | ``GCCcore/12.3.0`` ``6.0.1`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PyZMQ.md b/docs/version-specific/supported-software/p/PyZMQ.md index 6d22e0794..ec2a37dd0 100644 --- a/docs/version-specific/supported-software/p/PyZMQ.md +++ b/docs/version-specific/supported-software/p/PyZMQ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PyZMQ Python bindings for ZeroMQ @@ -28,3 +32,6 @@ version | versionsuffix | toolchain ``25.1.0`` | | ``GCCcore/12.2.0`` ``25.1.1`` | | ``GCCcore/12.3.0`` ``25.1.2`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/PycURL.md b/docs/version-specific/supported-software/p/PycURL.md index 559348c73..a656f92e8 100644 --- a/docs/version-specific/supported-software/p/PycURL.md +++ b/docs/version-specific/supported-software/p/PycURL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # PycURL PycURL is a Python interface to libcurl. PycURL can be used to fetch objects identified by a URL from a Python program, similar to the urllib Python module. PycURL is mature, very fast, and supports a lot of features. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``7.45.2`` | | ``GCCcore/12.2.0`` ``7.45.2`` | | ``GCCcore/12.3.0`` ``7.45.3`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pychopper.md b/docs/version-specific/supported-software/p/Pychopper.md index 9f3129a79..0eb2702fd 100644 --- a/docs/version-specific/supported-software/p/Pychopper.md +++ b/docs/version-specific/supported-software/p/Pychopper.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pychopper A tool to identify, orient, trim and rescue full length cDNA reads. @@ -7,3 +11,6 @@ A tool to identify, orient, trim and rescue full length cDNA reads. version | versionsuffix | toolchain --------|---------------|---------- ``2.3.1`` | ``-Python-3.7.4`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pygments.md b/docs/version-specific/supported-software/p/Pygments.md index 9736da8a6..796a88179 100644 --- a/docs/version-specific/supported-software/p/Pygments.md +++ b/docs/version-specific/supported-software/p/Pygments.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pygments Generic syntax highlighter suitable for use in code hosting, forums, wikis or other applications that need to prettify source code. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.1.3`` | ``-Python-2.7.11`` | ``foss/2016a`` ``2.1.3`` | ``-Python-3.5.1`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pyke3.md b/docs/version-specific/supported-software/p/Pyke3.md index 360b49566..8b9a71dde 100644 --- a/docs/version-specific/supported-software/p/Pyke3.md +++ b/docs/version-specific/supported-software/p/Pyke3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pyke3 Pyke introduces a form of Logic Programming (inspired by Prolog) to the Python community by providing a knowledge-based inference engine (expert system) written in 100% Python. @@ -7,3 +11,6 @@ Pyke introduces a form of Logic Programming (inspired by Prolog) to the Python version | versionsuffix | toolchain --------|---------------|---------- ``1.1.1`` | ``-Python-3.6.6`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pylint.md b/docs/version-specific/supported-software/p/Pylint.md index 53c45debc..50b8cd568 100644 --- a/docs/version-specific/supported-software/p/Pylint.md +++ b/docs/version-specific/supported-software/p/Pylint.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pylint Pylint is a tool that checks for errors in Python code, tries to enforce a coding standard and looks for code smells. It can also look for certain type errors, it can recommend suggestions about how particular blocks can be refactored and can offer you details about the code's complexity. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``1.9.5`` | ``-Python-2.7.16`` | ``GCCcore/8.3.0`` ``2.17.4`` | | ``GCCcore/12.2.0`` ``2.7.4`` | | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pyomo.md b/docs/version-specific/supported-software/p/Pyomo.md index d779f168a..e960a7996 100644 --- a/docs/version-specific/supported-software/p/Pyomo.md +++ b/docs/version-specific/supported-software/p/Pyomo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pyomo Pyomo is a Python-based open-source software package that supports a diverse set of optimization capabilities for formulating and analyzing optimization models. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``6.0.1`` | | ``foss/2021a`` ``6.4.2`` | | ``foss/2022a`` ``6.5.0`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pyro4.md b/docs/version-specific/supported-software/p/Pyro4.md index e07dd77d2..a028b0c63 100644 --- a/docs/version-specific/supported-software/p/Pyro4.md +++ b/docs/version-specific/supported-software/p/Pyro4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pyro4 Pyro means PYthon Remote Objects. It is a library that enables you to build applications in which objects can talk to eachother over the network, with minimal programming effort. @@ -7,3 +11,6 @@ Pyro means PYthon Remote Objects. It is a library that enables you to build appl version | versionsuffix | toolchain --------|---------------|---------- ``4.47`` | ``-Python-2.7.11`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pysam.md b/docs/version-specific/supported-software/p/Pysam.md index 1d5cf329e..248d2bc6c 100644 --- a/docs/version-specific/supported-software/p/Pysam.md +++ b/docs/version-specific/supported-software/p/Pysam.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pysam Pysam is a python module for reading and manipulating Samfiles. It's a lightweight wrapper of the samtools C-API. Pysam also includes an interface for tabix. @@ -47,3 +51,6 @@ version | versionsuffix | toolchain ``0.22.0`` | | ``GCC/13.2.0`` ``0.8.4`` | ``-Python-2.7.12`` | ``intel/2016b`` ``0.9.1.4`` | ``-Python-2.7.12`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Pysolar.md b/docs/version-specific/supported-software/p/Pysolar.md index 5083d9c7e..edb09aad0 100644 --- a/docs/version-specific/supported-software/p/Pysolar.md +++ b/docs/version-specific/supported-software/p/Pysolar.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Pysolar Pysolar is a collection of Python libraries for simulating the irradiation of any point on earth by the sun. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.7`` | ``-Python-3.6.4`` | ``intel/2018a`` ``0.8`` | ``-Python-3.7.2`` | ``GCCcore/8.2.0`` ``0.8`` | ``-Python-3.6.6`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Python-bundle-PyPI.md b/docs/version-specific/supported-software/p/Python-bundle-PyPI.md index 0b1bdf818..a48bb3561 100644 --- a/docs/version-specific/supported-software/p/Python-bundle-PyPI.md +++ b/docs/version-specific/supported-software/p/Python-bundle-PyPI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Python-bundle-PyPI Bundle of Python packages from PyPI @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2023.06`` | ``GCCcore/12.3.0`` ``2023.10`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Python-bundle.md b/docs/version-specific/supported-software/p/Python-bundle.md index 4a4b4cc3d..34db11e66 100644 --- a/docs/version-specific/supported-software/p/Python-bundle.md +++ b/docs/version-specific/supported-software/p/Python-bundle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Python-bundle Python distribution with a number of widely used extensions incl. NumPy, SciPy, Matplotlib, JupyterLab, MPI4PY, ... @@ -7,3 +11,6 @@ Python distribution with a number of widely used extensions incl. NumPy, SciPy, version | toolchain --------|---------- ``3.10.4`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/Python.md b/docs/version-specific/supported-software/p/Python.md index 5ce3484ed..7dcc0f7fe 100644 --- a/docs/version-specific/supported-software/p/Python.md +++ b/docs/version-specific/supported-software/p/Python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Python Python is a programming language that lets you work more quickly and integrate your systems more effectively. @@ -105,3 +109,6 @@ version | versionsuffix | toolchain ``3.9.5`` | | ``GCCcore/10.3.0`` ``3.9.6`` | ``-bare`` | ``GCCcore/11.2.0`` ``3.9.6`` | | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/index.md b/docs/version-specific/supported-software/p/index.md index 80e222f8f..fef7d20a1 100644 --- a/docs/version-specific/supported-software/p/index.md +++ b/docs/version-specific/supported-software/p/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (p) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - *p* - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [p11-kit](p11-kit.md) * [p4-phylogenetics](p4-phylogenetics.md) * [p4est](p4est.md) diff --git a/docs/version-specific/supported-software/p/p11-kit.md b/docs/version-specific/supported-software/p/p11-kit.md index 58bfcf78d..70f8ac2d9 100644 --- a/docs/version-specific/supported-software/p/p11-kit.md +++ b/docs/version-specific/supported-software/p/p11-kit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # p11-kit Provides a way to load and enumerate PKCS#11 modules. Provides a standard configuration setup for installing PKCS#11 modules in such a way that they're discoverable. Also solves problems with coordinating the use of PKCS#11 by different components or libraries living in the same process. @@ -14,3 +18,6 @@ version | toolchain ``0.24.1`` | ``GCCcore/11.2.0`` ``0.24.1`` | ``GCCcore/11.3.0`` ``0.25.3`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/p4-phylogenetics.md b/docs/version-specific/supported-software/p/p4-phylogenetics.md index 558af5031..b114aa793 100644 --- a/docs/version-specific/supported-software/p/p4-phylogenetics.md +++ b/docs/version-specific/supported-software/p/p4-phylogenetics.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # p4-phylogenetics A Python phyloinformatic toolkit, and an implementation of tree-heterogeneous models of evolution. @@ -7,3 +11,6 @@ A Python phyloinformatic toolkit, and an implementation of tree-heterogeneous mo version | versionsuffix | toolchain --------|---------------|---------- ``1.4-20210322`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/p4est.md b/docs/version-specific/supported-software/p/p4est.md index 8b9a49e51..fdcf2a8fd 100644 --- a/docs/version-specific/supported-software/p/p4est.md +++ b/docs/version-specific/supported-software/p/p4est.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # p4est p4est is a C library to manage a collection (a forest) of multiple connected adaptive quadtrees or octrees in parallel. @@ -10,3 +14,6 @@ version | toolchain ``2.2`` | ``intel/2019a`` ``2.8`` | ``foss/2021a`` ``2.8.6`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/p4vasp.md b/docs/version-specific/supported-software/p/p4vasp.md index bfc7d3a6a..157bb2d21 100644 --- a/docs/version-specific/supported-software/p/p4vasp.md +++ b/docs/version-specific/supported-software/p/p4vasp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # p4vasp Visualization suite for VASP @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.3.30`` | ``-Python-2.7.15`` | ``foss/2018b`` ``0.3.30`` | ``-Python-2.7.14`` | ``intel/2017b`` ``0.3.30`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/p7zip.md b/docs/version-specific/supported-software/p/p7zip.md index d50859d1c..d5a846e12 100644 --- a/docs/version-specific/supported-software/p/p7zip.md +++ b/docs/version-specific/supported-software/p/p7zip.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # p7zip p7zip is a quick port of 7z.exe and 7za.exe (command line version of 7zip) for Unix. 7-Zip is a file archiver with highest compression ratio. @@ -16,3 +20,6 @@ version | toolchain ``17.04`` | ``GCCcore/12.3.0`` ``9.38.1`` | ``GCC/4.9.2`` ``9.38.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pFUnit.md b/docs/version-specific/supported-software/p/pFUnit.md index ade60431e..362cd1b46 100644 --- a/docs/version-specific/supported-software/p/pFUnit.md +++ b/docs/version-specific/supported-software/p/pFUnit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pFUnit pFUnit is a unit testing framework enabling JUnit-like testing of serial and MPI-parallel software written in Fortran. @@ -10,3 +14,6 @@ version | toolchain ``4.2.0`` | ``gompi/2020b`` ``4.2.0`` | ``iimpi/2021a`` ``4.7.3`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pIRS.md b/docs/version-specific/supported-software/p/pIRS.md index c79dfbe3b..cd8a00f23 100644 --- a/docs/version-specific/supported-software/p/pIRS.md +++ b/docs/version-specific/supported-software/p/pIRS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pIRS pIRS (profile based Illumina pair-end Reads Simulator) is a program for simulating paired-end reads from a reference genome. It is optimized for simulating reads similar to those generated from the Illumina platform. @@ -7,3 +11,6 @@ pIRS (profile based Illumina pair-end Reads Simulator) is a program for simulati version | toolchain --------|---------- ``2.0.2`` | ``gompi/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/packmol.md b/docs/version-specific/supported-software/p/packmol.md index 5be778178..81139854c 100644 --- a/docs/version-specific/supported-software/p/packmol.md +++ b/docs/version-specific/supported-software/p/packmol.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # packmol Packing Optimization for Molecular Dynamics Simulations @@ -11,3 +15,6 @@ version | toolchain ``18.013`` | ``intel/2018a`` ``20.2.2`` | ``GCC/10.2.0`` ``v20.2.2`` | ``iccifort/2020.1.217`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pagmo.md b/docs/version-specific/supported-software/p/pagmo.md index 6f226ccef..507237c15 100644 --- a/docs/version-specific/supported-software/p/pagmo.md +++ b/docs/version-specific/supported-software/p/pagmo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pagmo pagmo is a C++ scientific library for massively parallel optimization. @@ -10,3 +14,6 @@ version | toolchain ``2.18.0`` | ``foss/2021a`` ``2.18.0`` | ``foss/2021b`` ``2.18.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pairsnp.md b/docs/version-specific/supported-software/p/pairsnp.md index 3f8716a00..37bb7d8fa 100644 --- a/docs/version-specific/supported-software/p/pairsnp.md +++ b/docs/version-specific/supported-software/p/pairsnp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pairsnp A set of scripts for very quickly obtaining pairwise SNP distance matrices from multiple sequence alignments using sparse matrix libraries to improve performance. @@ -7,3 +11,6 @@ A set of scripts for very quickly obtaining pairwise SNP distance matrices from version | toolchain --------|---------- ``0.0.7`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/paladin.md b/docs/version-specific/supported-software/p/paladin.md index 6620a17ff..bce6b5691 100644 --- a/docs/version-specific/supported-software/p/paladin.md +++ b/docs/version-specific/supported-software/p/paladin.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # paladin Protein ALignment And Detection INterface PALADIN is a protein sequence alignment tool designed for the accurate functional characterization of metagenomes. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.4.6`` | ``GCCcore/10.3.0`` ``1.4.6`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/panaroo.md b/docs/version-specific/supported-software/p/panaroo.md index 0b5ddb59c..bda503e1b 100644 --- a/docs/version-specific/supported-software/p/panaroo.md +++ b/docs/version-specific/supported-software/p/panaroo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # panaroo A pangenome analysis pipeline. @@ -9,3 +13,6 @@ version | toolchain ``1.2.8`` | ``foss/2020b`` ``1.2.9`` | ``foss/2021a`` ``1.3.2`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pandapower.md b/docs/version-specific/supported-software/p/pandapower.md index f7e8aeb49..b03c7f7c5 100644 --- a/docs/version-specific/supported-software/p/pandapower.md +++ b/docs/version-specific/supported-software/p/pandapower.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pandapower An easy to use open source tool for power system modeling, analysis and optimization with a high degree of automation @@ -7,3 +11,6 @@ An easy to use open source tool for power system modeling, analysis and optimiza version | toolchain --------|---------- ``2.7.0`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pandas-datareader.md b/docs/version-specific/supported-software/p/pandas-datareader.md index 2d44e204f..eaaa4fa7b 100644 --- a/docs/version-specific/supported-software/p/pandas-datareader.md +++ b/docs/version-specific/supported-software/p/pandas-datareader.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pandas-datareader Up to date remote data access for pandas, works for multiple versions of pandas. @@ -7,3 +11,6 @@ Up to date remote data access for pandas, works for multiple versions of pandas. version | versionsuffix | toolchain --------|---------------|---------- ``0.7.0`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pandas.md b/docs/version-specific/supported-software/p/pandas.md index bb32f4d57..650f0ba66 100644 --- a/docs/version-specific/supported-software/p/pandas.md +++ b/docs/version-specific/supported-software/p/pandas.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pandas pandas is an open source, BSD-licensed library providing high-performance, easy-to-use data structures and data analysis tools for the Python programming language. @@ -22,3 +26,6 @@ version | versionsuffix | toolchain ``0.21.0`` | ``-Python-2.7.13`` | ``intel/2017a`` ``0.21.0`` | ``-Python-3.6.3`` | ``intel/2017b`` ``1.1.2`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pangolin.md b/docs/version-specific/supported-software/p/pangolin.md index 582c05307..175475a2c 100644 --- a/docs/version-specific/supported-software/p/pangolin.md +++ b/docs/version-specific/supported-software/p/pangolin.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pangolin Software package for assigning SARS-CoV-2 genome sequences to global lineages. This module also contains the faToVcf tool @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``3.1.11`` | | ``foss/2020b`` ``3.1.16`` | ``-pangoLEARN-2021-10-18`` | ``foss/2021b`` ``3.1.16`` | ``-pangoLEARN-2021-11-25`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/panito.md b/docs/version-specific/supported-software/p/panito.md index e8d1f7426..cecff70e7 100644 --- a/docs/version-specific/supported-software/p/panito.md +++ b/docs/version-specific/supported-software/p/panito.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # panito Calculate genome wide average nucleotide identity (gwANI) for a multiFASTA alignment. @@ -7,3 +11,6 @@ Calculate genome wide average nucleotide identity (gwANI) for a multiFASTA align version | toolchain --------|---------- ``0.0.1`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/parallel-fastq-dump.md b/docs/version-specific/supported-software/p/parallel-fastq-dump.md index e474dc48d..fadc4ad94 100644 --- a/docs/version-specific/supported-software/p/parallel-fastq-dump.md +++ b/docs/version-specific/supported-software/p/parallel-fastq-dump.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # parallel-fastq-dump parallel fastq-dump wrapper @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.6.6`` | ``-Python-3.8.2`` | ``GCCcore/9.3.0`` ``0.6.7`` | | ``gompi/2020b`` ``0.6.7`` | | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/parallel.md b/docs/version-specific/supported-software/p/parallel.md index 635521a33..def2ccf2e 100644 --- a/docs/version-specific/supported-software/p/parallel.md +++ b/docs/version-specific/supported-software/p/parallel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # parallel parallel: Build and execute shell commands in parallel @@ -29,3 +33,6 @@ version | toolchain ``20230722`` | ``GCCcore/12.2.0`` ``20230722`` | ``GCCcore/12.3.0`` ``20240322`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/parameterized.md b/docs/version-specific/supported-software/p/parameterized.md index 5c1844a11..a23feb680 100644 --- a/docs/version-specific/supported-software/p/parameterized.md +++ b/docs/version-specific/supported-software/p/parameterized.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # parameterized Parameterized testing with any Python test framework @@ -9,3 +13,6 @@ version | toolchain ``0.8.1`` | ``GCCcore/10.3.0`` ``0.9.0`` | ``GCCcore/11.3.0`` ``0.9.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/paramiko.md b/docs/version-specific/supported-software/p/paramiko.md index f1c39e382..12161c213 100644 --- a/docs/version-specific/supported-software/p/paramiko.md +++ b/docs/version-specific/supported-software/p/paramiko.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # paramiko Paramiko is a pure-Python (3.6+) implementation of the SSHv2 protocol, providing both client and server functionality. It provides the foundation for the high-level SSH library Fabric, which is what we recommend you use for common client use-cases such as running remote shell commands or transferring files. @@ -7,3 +11,6 @@ Paramiko is a pure-Python (3.6+) implementation of the SSHv2 protocol, providing version | toolchain --------|---------- ``3.2.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/parasail.md b/docs/version-specific/supported-software/p/parasail.md index eedce20a5..0e9a7c144 100644 --- a/docs/version-specific/supported-software/p/parasail.md +++ b/docs/version-specific/supported-software/p/parasail.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # parasail parasail is a SIMD C (C99) library containing implementations of the Smith-Waterman (local), Needleman-Wunsch (global), and semi-global pairwise sequence alignment algorithms. @@ -18,3 +22,6 @@ version | toolchain ``2.6`` | ``GCC/11.3.0`` ``2.6.2`` | ``GCC/12.2.0`` ``2.6.2`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pasta.md b/docs/version-specific/supported-software/p/pasta.md index 8690c73b5..b103e655f 100644 --- a/docs/version-specific/supported-software/p/pasta.md +++ b/docs/version-specific/supported-software/p/pasta.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pasta PASTA (Practical Alignment using SATe and Transitivity) @@ -7,3 +11,6 @@ PASTA (Practical Alignment using SATe and Transitivity) version | versionsuffix | toolchain --------|---------------|---------- ``1.8.5`` | ``-Python-3.7.2`` | ``GCC/8.2.0-2.31.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pastml.md b/docs/version-specific/supported-software/p/pastml.md index c9fb9cea6..0da362a8a 100644 --- a/docs/version-specific/supported-software/p/pastml.md +++ b/docs/version-specific/supported-software/p/pastml.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pastml Ancestor character reconstruction and visualisation for rooted phylogenetic trees @@ -7,3 +11,6 @@ Ancestor character reconstruction and visualisation for rooted phylogenetic tree version | toolchain --------|---------- ``1.9.34`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/patch.md b/docs/version-specific/supported-software/p/patch.md index 24592ae60..0160c8a63 100644 --- a/docs/version-specific/supported-software/p/patch.md +++ b/docs/version-specific/supported-software/p/patch.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # patch Patch takes a patch file containing a difference listing produced by the diff program and applies those differences to one or more original files, producing patched versions. @@ -7,3 +11,6 @@ Patch takes a patch file containing a difference listing produced by the diff pr version | toolchain --------|---------- ``2.7.6`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/patchelf.md b/docs/version-specific/supported-software/p/patchelf.md index 14b62cd5c..aa5fcc652 100644 --- a/docs/version-specific/supported-software/p/patchelf.md +++ b/docs/version-specific/supported-software/p/patchelf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # patchelf PatchELF is a small utility to modify the dynamic linker and RPATH of ELF executables. @@ -20,3 +24,6 @@ version | toolchain ``0.8`` | ``GNU/4.9.3-2.25`` ``0.9`` | ``GCCcore/6.4.0`` ``0.9`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/path.py.md b/docs/version-specific/supported-software/p/path.py.md index de65829d3..406b04be1 100644 --- a/docs/version-specific/supported-software/p/path.py.md +++ b/docs/version-specific/supported-software/p/path.py.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # path.py path.py is a Python library implementing path objects as first-class entities, allowing common operations on files to be invoked on those path objects directly. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``8.2.1`` | ``-Python-2.7.12`` | ``foss/2016b`` ``8.2.1`` | ``-Python-2.7.12`` | ``intel/2016b`` ``8.2.1`` | ``-Python-3.5.2`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pauvre.md b/docs/version-specific/supported-software/p/pauvre.md index ed2731946..8983a5b16 100644 --- a/docs/version-specific/supported-software/p/pauvre.md +++ b/docs/version-specific/supported-software/p/pauvre.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pauvre Tools for plotting Oxford Nanopore and other long-read data @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``0.2.3`` | | ``foss/2022a`` ``0.2.3`` | | ``foss/2022b`` ``0.2.3`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pbbam.md b/docs/version-specific/supported-software/p/pbbam.md index 3d4cb7c4e..714e7270a 100644 --- a/docs/version-specific/supported-software/p/pbbam.md +++ b/docs/version-specific/supported-software/p/pbbam.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pbbam The pbbam software package provides components to create, query, & edit PacBio BAM files and associated indices. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.6`` | ``gompi/2019a`` ``20170508`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pbcopper.md b/docs/version-specific/supported-software/p/pbcopper.md index ec046f609..2e3c19e3a 100644 --- a/docs/version-specific/supported-software/p/pbcopper.md +++ b/docs/version-specific/supported-software/p/pbcopper.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pbcopper The pbcopper library provides a suite of data structures, algorithms, and utilities for C++ applications. @@ -7,3 +11,6 @@ The pbcopper library provides a suite of data structures, algorithms, and utili version | toolchain --------|---------- ``1.3.0`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pbdagcon.md b/docs/version-specific/supported-software/p/pbdagcon.md index 515c99444..0627f12b6 100644 --- a/docs/version-specific/supported-software/p/pbdagcon.md +++ b/docs/version-specific/supported-software/p/pbdagcon.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pbdagcon pbdagcon is a tool that implements DAGCon (Directed Acyclic Graph Consensus) which is a sequence consensus algorithm based on using directed acyclic graphs to encode multiple sequence alignment. @@ -7,3 +11,6 @@ pbdagcon is a tool that implements DAGCon (Directed Acyclic Graph Consensus) whi version | toolchain --------|---------- ``20170330`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pbipa.md b/docs/version-specific/supported-software/p/pbipa.md index 420a3f890..631ff7f1c 100644 --- a/docs/version-specific/supported-software/p/pbipa.md +++ b/docs/version-specific/supported-software/p/pbipa.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pbipa Improved Phased Assembler (IPA) is the official PacBio software for HiFi genome assembly. IPA was designed to utilize the accuracy of PacBio HiFi reads to produce high-quality phased genome assemblies. IPA is an end-to-end solution, starting with input reads and resulting in a polished assembly. IPA is fast, providing an easy to use local run mode or a distributed pipeline for a cluster. @@ -7,3 +11,6 @@ Improved Phased Assembler (IPA) is the official PacBio software for HiFi genome version | toolchain --------|---------- ``1.8.0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pblat.md b/docs/version-specific/supported-software/p/pblat.md index 118472a75..b63ad3e26 100644 --- a/docs/version-specific/supported-software/p/pblat.md +++ b/docs/version-specific/supported-software/p/pblat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pblat When the query file format is fasta, you can specify many threads to process it. It can reduce run time linearly, and use almost equal memory as the original blat program. This is useful when you blat a big query file to a huge reference like human whole genome sequence. @@ -7,3 +11,6 @@ When the query file format is fasta, you can specify many threads to process it. version | toolchain --------|---------- ``2.5.1`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pbmm2.md b/docs/version-specific/supported-software/p/pbmm2.md index 6c325e1b9..5420c5873 100644 --- a/docs/version-specific/supported-software/p/pbmm2.md +++ b/docs/version-specific/supported-software/p/pbmm2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pbmm2 A minimap2 frontend for PacBio native data formats @@ -7,3 +11,6 @@ A minimap2 frontend for PacBio native data formats version | toolchain --------|---------- ``1.1.0`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pbs_python.md b/docs/version-specific/supported-software/p/pbs_python.md index b0bf65100..5f26d3d8e 100644 --- a/docs/version-specific/supported-software/p/pbs_python.md +++ b/docs/version-specific/supported-software/p/pbs_python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pbs_python The pbs_python package is a wrapper class for the Torque C library. With this package you now can write utilities/extensions in Python instead of C. We developed this package because we want to replace xpbsmon by an ascii version named pbsmon. PBSQuery is also included in this package. This is a python module build on top of the pbs python module to simplify querying the batch server, eg: how many jobs, how many nodes, ... @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``4.6.0`` | ``-Python-2.7.12`` | ``intel/2016b`` ``4.6.0`` | ``-Python-2.7.13`` | ``intel/2017a`` ``4.6.0`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pdf2docx.md b/docs/version-specific/supported-software/p/pdf2docx.md index 3ab9d9daa..a76f21f35 100644 --- a/docs/version-specific/supported-software/p/pdf2docx.md +++ b/docs/version-specific/supported-software/p/pdf2docx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pdf2docx Open source Python library converting pdf to docx. @@ -7,3 +11,6 @@ Open source Python library converting pdf to docx. version | toolchain --------|---------- ``0.5.8`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pdsh.md b/docs/version-specific/supported-software/p/pdsh.md index c6ba4a343..c1c7de48d 100644 --- a/docs/version-specific/supported-software/p/pdsh.md +++ b/docs/version-specific/supported-software/p/pdsh.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pdsh A high performance, parallel remote shell utility @@ -9,3 +13,6 @@ version | toolchain ``2.34`` | ``GCCcore/11.3.0`` ``2.34`` | ``GCCcore/12.2.0`` ``2.34`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/peakdetect.md b/docs/version-specific/supported-software/p/peakdetect.md index 49ec601ff..b3cc80b6a 100644 --- a/docs/version-specific/supported-software/p/peakdetect.md +++ b/docs/version-specific/supported-software/p/peakdetect.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # peakdetect Simple peak detection library for Python based on Billauer's work and this gist. @@ -7,3 +11,6 @@ Simple peak detection library for Python based on Billauer's work and this gist. version | toolchain --------|---------- ``1.2`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/perl-app-cpanminus.md b/docs/version-specific/supported-software/p/perl-app-cpanminus.md index 2c5c27e9a..b6e4136a0 100644 --- a/docs/version-specific/supported-software/p/perl-app-cpanminus.md +++ b/docs/version-specific/supported-software/p/perl-app-cpanminus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # perl-app-cpanminus cpanm - get, unpack build and install modules from CPAN @@ -7,3 +11,6 @@ cpanm - get, unpack build and install modules from CPAN version | toolchain --------|---------- ``1.7039`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/petsc4py.md b/docs/version-specific/supported-software/p/petsc4py.md index 95369b2e4..b8dee9365 100644 --- a/docs/version-specific/supported-software/p/petsc4py.md +++ b/docs/version-specific/supported-software/p/petsc4py.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # petsc4py petsc4py are Python bindings for PETSc, the Portable, Extensible Toolchain for Scientific Computation. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``3.15.0`` | | ``foss/2021a`` ``3.20.3`` | | ``foss/2023a`` ``3.9.1`` | ``-Python-3.6.4`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pfind.md b/docs/version-specific/supported-software/p/pfind.md index 9018bf6bd..f5548a16c 100644 --- a/docs/version-specific/supported-software/p/pfind.md +++ b/docs/version-specific/supported-software/p/pfind.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pfind Drop-in replacement for find, implemented for using parallel access and MPI. @@ -7,3 +11,6 @@ Drop-in replacement for find, implemented for using parallel access and MPI. version | toolchain --------|---------- ``20220613`` | ``gompi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pftoolsV3.md b/docs/version-specific/supported-software/p/pftoolsV3.md index db083ff1c..7da8b205f 100644 --- a/docs/version-specific/supported-software/p/pftoolsV3.md +++ b/docs/version-specific/supported-software/p/pftoolsV3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pftoolsV3 The pftools package contains all the software necessary to build protein and DNA generalized profiles and use them to scan and align sequences, and search databases. @@ -11,3 +15,6 @@ version | toolchain ``3.2.11`` | ``foss/2021a`` ``3.2.12`` | ``GCCcore/11.2.0`` ``3.2.12`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/phonemizer.md b/docs/version-specific/supported-software/p/phonemizer.md index 7eb77333d..1130d528e 100644 --- a/docs/version-specific/supported-software/p/phonemizer.md +++ b/docs/version-specific/supported-software/p/phonemizer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # phonemizer The phonemizer allows simple phonemization of words and texts in many languages. Provides both the phonemize command-line tool and the Python function phonemizer.phonemize. It is using four backends: espeak, espeak-mbrola, festival and segments. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.2.1`` | ``-Python-3.8.2`` | ``gompi/2020a`` ``3.2.1`` | | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/phono3py.md b/docs/version-specific/supported-software/p/phono3py.md index 2206fcf85..c2e34f2d3 100644 --- a/docs/version-specific/supported-software/p/phono3py.md +++ b/docs/version-specific/supported-software/p/phono3py.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # phono3py phono3py calculates phonon-phonon interaction and related properties using the supercell approach. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.12.7.55`` | ``-Python-2.7.14`` | ``foss/2018a`` ``1.12.7.55`` | ``-Python-2.7.14`` | ``intel/2018a`` ``2.7.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/phonopy.md b/docs/version-specific/supported-software/p/phonopy.md index 32d24e8b1..f90bd4b77 100644 --- a/docs/version-specific/supported-software/p/phonopy.md +++ b/docs/version-specific/supported-software/p/phonopy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # phonopy Phonopy is an open source package of phonon calculations based on the supercell approach. @@ -19,3 +23,6 @@ version | versionsuffix | toolchain ``2.20.0`` | | ``foss/2023a`` ``2.7.1`` | ``-Python-3.7.4`` | ``intel/2019b`` ``2.7.1`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/photontorch.md b/docs/version-specific/supported-software/p/photontorch.md index dd50d0494..c0299d28e 100644 --- a/docs/version-specific/supported-software/p/photontorch.md +++ b/docs/version-specific/supported-software/p/photontorch.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # photontorch Photontorch is a photonic simulator for highly parallel simulation and optimization of photonic circuits in time and frequency domain. Photontorch features CUDA enabled simulation and optimization of photonic circuits. It leverages the deep learning framework PyTorch to view the photonic circuit as essentially a recurrent neural network. This enables the use of native PyTorch optimizers to optimize the (physical) parameters of the circuit. @@ -9,3 +13,6 @@ version | toolchain ``0.4.1`` | ``foss/2020b`` ``0.4.1`` | ``foss/2022a`` ``0.4.1`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/phototonic.md b/docs/version-specific/supported-software/p/phototonic.md index 91542bd32..0e91cca2c 100644 --- a/docs/version-specific/supported-software/p/phototonic.md +++ b/docs/version-specific/supported-software/p/phototonic.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # phototonic Phototonic is an image viewer and organizer @@ -7,3 +11,6 @@ Phototonic is an image viewer and organizer version | toolchain --------|---------- ``2.1`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/phylokit.md b/docs/version-specific/supported-software/p/phylokit.md index 603fc812e..8978f4492 100644 --- a/docs/version-specific/supported-software/p/phylokit.md +++ b/docs/version-specific/supported-software/p/phylokit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # phylokit C++ library for high performance phylogenetics @@ -7,3 +11,6 @@ C++ library for high performance phylogenetics version | toolchain --------|---------- ``1.0`` | ``GCC/8.2.0-2.31.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/phylonaut.md b/docs/version-specific/supported-software/p/phylonaut.md index 04903fc6f..ce8adb3c9 100644 --- a/docs/version-specific/supported-software/p/phylonaut.md +++ b/docs/version-specific/supported-software/p/phylonaut.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # phylonaut Dynamic programming for phylogenetics applications @@ -7,3 +11,6 @@ Dynamic programming for phylogenetics applications version | toolchain --------|---------- ``20190626`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/phyluce.md b/docs/version-specific/supported-software/p/phyluce.md index f53c1984b..2aa1f9d13 100644 --- a/docs/version-specific/supported-software/p/phyluce.md +++ b/docs/version-specific/supported-software/p/phyluce.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # phyluce phyluce is a software package for working with data generated from sequence capture of UCE (ultra-conserved element) loci, as first published in [BCF2012]. Specifically, phyluce is a suite of programs to: 1) assemble raw sequence reads from Illumina platforms into contigs 2) determine which contigs represent UCE loci 3) filter potentially paralagous UCE loci 4) generate different sets of UCE loci across taxa of interest @@ -7,3 +11,6 @@ phyluce is a software package for working with data generated from sequence capt version | toolchain --------|---------- ``1.7.3`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/phyx.md b/docs/version-specific/supported-software/p/phyx.md index f3b118c2f..062dc98f0 100644 --- a/docs/version-specific/supported-software/p/phyx.md +++ b/docs/version-specific/supported-software/p/phyx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # phyx phyx performs phylogenetics analyses on trees and sequences. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.01`` | ``foss/2019a`` ``1.3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/piSvM-JSC.md b/docs/version-specific/supported-software/p/piSvM-JSC.md index 495baa68a..c5404ba3c 100644 --- a/docs/version-specific/supported-software/p/piSvM-JSC.md +++ b/docs/version-specific/supported-software/p/piSvM-JSC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # piSvM-JSC piSvM is a parallel implementation of the Support Vector Machine (SVM) algorithm that allows efficient training and testing on a multiprocessor system. This version is a fork of the original PiSvM to increase scalability. @@ -7,3 +11,6 @@ piSvM is a parallel implementation of the Support Vector Machine (SVM) algorithm version | toolchain --------|---------- ``1.2-20150622`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/piSvM.md b/docs/version-specific/supported-software/p/piSvM.md index f73e1fef5..f0fa8621d 100644 --- a/docs/version-specific/supported-software/p/piSvM.md +++ b/docs/version-specific/supported-software/p/piSvM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # piSvM piSvM is a parallel implementation of the Support Vector Machine (SVM) algorithm that allows efficient training and testing on a multiprocessor system. @@ -7,3 +11,6 @@ piSvM is a parallel implementation of the Support Vector Machine (SVM) algorithm version | toolchain --------|---------- ``1.3`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/picard.md b/docs/version-specific/supported-software/p/picard.md index a11d4b940..4357e1fe8 100644 --- a/docs/version-specific/supported-software/p/picard.md +++ b/docs/version-specific/supported-software/p/picard.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # picard A set of tools (in Java) for working with next generation sequencing data in the BAM format. @@ -35,3 +39,6 @@ version | versionsuffix | toolchain ``2.26.10`` | ``-Java-15`` | ``system`` ``2.6.0`` | ``-Java-1.8.0_131`` | ``system`` ``3.0.0`` | ``-Java-17`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pigz.md b/docs/version-specific/supported-software/p/pigz.md index f9cd80580..633498835 100644 --- a/docs/version-specific/supported-software/p/pigz.md +++ b/docs/version-specific/supported-software/p/pigz.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pigz pigz, which stands for parallel implementation of gzip, is a fully functional replacement for gzip that exploits multiple processors and multiple cores to the hilt when compressing data. pigz was written by Mark Adler, and uses the zlib and pthread libraries. @@ -22,3 +26,6 @@ version | toolchain ``2.7`` | ``GCCcore/12.2.0`` ``2.8`` | ``GCCcore/12.3.0`` ``2.8`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pip.md b/docs/version-specific/supported-software/p/pip.md index 35cdbd3b4..93eb430e9 100644 --- a/docs/version-specific/supported-software/p/pip.md +++ b/docs/version-specific/supported-software/p/pip.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pip The PyPA recommended tool for installing Python packages. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``8.1.2`` | ``-Python-2.7.11`` | ``foss/2016a`` ``8.1.2`` | ``-Python-2.7.12`` | ``foss/2016b`` ``8.1.2`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pixman.md b/docs/version-specific/supported-software/p/pixman.md index 89fd51e63..e8551a914 100644 --- a/docs/version-specific/supported-software/p/pixman.md +++ b/docs/version-specific/supported-software/p/pixman.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pixman Pixman is a low-level software library for pixel manipulation, providing features such as image compositing and trapezoid rasterization. Important users of pixman are the cairo graphics library and the X server. @@ -24,3 +28,6 @@ version | toolchain ``0.42.2`` | ``GCCcore/12.2.0`` ``0.42.2`` | ``GCCcore/12.3.0`` ``0.42.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pizzly.md b/docs/version-specific/supported-software/p/pizzly.md index 87ce76bb3..b35f17467 100644 --- a/docs/version-specific/supported-software/p/pizzly.md +++ b/docs/version-specific/supported-software/p/pizzly.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pizzly Pizzly is a program for detecting gene fusions from RNA-Seq data of cancer samples. @@ -7,3 +11,6 @@ Pizzly is a program for detecting gene fusions from RNA-Seq data of cancer sampl version | toolchain --------|---------- ``0.37.3`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pkg-config.md b/docs/version-specific/supported-software/p/pkg-config.md index 062e9e4cf..54ac73613 100644 --- a/docs/version-specific/supported-software/p/pkg-config.md +++ b/docs/version-specific/supported-software/p/pkg-config.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pkg-config pkg-config is a helper tool used when compiling applications and libraries. It helps you insert the correct compiler options on the command line so an application can use gcc -o test test.c `pkg-config --libs --cflags glib-2.0` for instance, rather than hard-coding values on where to find glib (or other libraries). @@ -36,3 +40,6 @@ version | toolchain ``0.29.2`` | ``GCCcore/9.3.0`` ``0.29.2`` | ``intel/2017a`` ``0.29.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pkgconf.md b/docs/version-specific/supported-software/p/pkgconf.md index 5dda3447c..4b7f2ca5a 100644 --- a/docs/version-specific/supported-software/p/pkgconf.md +++ b/docs/version-specific/supported-software/p/pkgconf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pkgconf pkgconf is a program which helps to configure compiler and linker flags for development libraries. It is similar to pkg-config from freedesktop.org. @@ -16,3 +20,6 @@ version | toolchain ``2.0.3`` | ``GCCcore/13.2.0`` ``2.2.0`` | ``GCCcore/13.3.0`` ``2.2.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pkgconfig.md b/docs/version-specific/supported-software/p/pkgconfig.md index cad0c4ad8..b2a2f013a 100644 --- a/docs/version-specific/supported-software/p/pkgconfig.md +++ b/docs/version-specific/supported-software/p/pkgconfig.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pkgconfig pkgconfig is a Python module to interface with the pkg-config command line tool @@ -43,3 +47,6 @@ version | versionsuffix | toolchain ``1.5.5`` | ``-python`` | ``GCCcore/12.2.0`` ``1.5.5`` | ``-python`` | ``GCCcore/12.3.0`` ``1.5.5`` | ``-python`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/planarity.md b/docs/version-specific/supported-software/p/planarity.md index df061666e..26ffcd1f8 100644 --- a/docs/version-specific/supported-software/p/planarity.md +++ b/docs/version-specific/supported-software/p/planarity.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # planarity A library for implementing graph algorithms @@ -7,3 +11,6 @@ A library for implementing graph algorithms version | toolchain --------|---------- ``3.0.2.0`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/plantcv.md b/docs/version-specific/supported-software/p/plantcv.md index fd7aabb8d..692021a79 100644 --- a/docs/version-specific/supported-software/p/plantcv.md +++ b/docs/version-specific/supported-software/p/plantcv.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # plantcv PlantCV: Plant phenotyping using computer vision. @@ -7,3 +11,6 @@ PlantCV: Plant phenotyping using computer vision. version | versionsuffix | toolchain --------|---------------|---------- ``3.8.0`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/plantri.md b/docs/version-specific/supported-software/p/plantri.md index 09804e274..0df205ff9 100644 --- a/docs/version-specific/supported-software/p/plantri.md +++ b/docs/version-specific/supported-software/p/plantri.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # plantri Plantri is a program that generates certain types of graphs that are imbedded on the sphere. Exactly one member of each isomorphism class is output, using an amount of memory almost independent of the number of graphs produced. This, together with the exceptionally fast operation and careful validation, makes the program suitable for processing very large numbers of graphs. Isomorphisms are defined with respect to the embeddings, so in some cases outputs may be isomorphic as abstract graphs. @@ -7,3 +11,6 @@ Plantri is a program that generates certain types of graphs that are imbedded on version | toolchain --------|---------- ``5.4`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/plc.md b/docs/version-specific/supported-software/p/plc.md index e08cf5489..5fcce2afa 100644 --- a/docs/version-specific/supported-software/p/plc.md +++ b/docs/version-specific/supported-software/p/plc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # plc plc is the public Planck Likelihood Code. It provides C and Fortran libraries that allow users to compute the log likelihoods of the temperature, polarization, and lensing maps. Optionally, it also provides a python version of this library, as well as tools to modify the predetermined options for some likelihoods (e.g. changing the high-ell and low-ell lmin and lmax values of the temperature). @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``3.0.1`` | ``-Python-3.7.4`` | ``foss/2019b`` ``3.0.1`` | ``-Python-2.7.15`` | ``intel/2018b`` ``3.10`` | | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/plinkQC.md b/docs/version-specific/supported-software/p/plinkQC.md index e0b4d4671..f00f60fcd 100644 --- a/docs/version-specific/supported-software/p/plinkQC.md +++ b/docs/version-specific/supported-software/p/plinkQC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # plinkQC plinkQC is a R/CRAN package for genotype quality control in genetic association studies. It makes PLINK basic statistics (e.g.missing genotyping rates per individual, allele frequencies per genetic marker) and relationship functions easily accessible from within R and allows for automatic evaluation of the results. @@ -7,3 +11,6 @@ plinkQC is a R/CRAN package for genotype quality control in genetic association version | versionsuffix | toolchain --------|---------------|---------- ``0.3.3`` | ``-R-4.0.0`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/plinkliftover.md b/docs/version-specific/supported-software/p/plinkliftover.md index 99e3c40bb..da9a5eb3c 100644 --- a/docs/version-specific/supported-software/p/plinkliftover.md +++ b/docs/version-specific/supported-software/p/plinkliftover.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # plinkliftover PLINKLiftOver is a utility enabling liftOver to work on genomics files from PLINK, allowing one to update the coordinates from one genome reference version to another. @@ -7,3 +11,6 @@ PLINKLiftOver is a utility enabling liftOver to work on genomics files from PLIN version | toolchain --------|---------- ``0.3.0`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/plmc.md b/docs/version-specific/supported-software/p/plmc.md index 7024cec33..82e6c9945 100644 --- a/docs/version-specific/supported-software/p/plmc.md +++ b/docs/version-specific/supported-software/p/plmc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # plmc Inference of couplings in proteins and RNAs from sequence variation. @@ -7,3 +11,6 @@ Inference of couplings in proteins and RNAs from sequence variation. version | versionsuffix | toolchain --------|---------------|---------- ``20230121`` | ``-32bit`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/plot1cell.md b/docs/version-specific/supported-software/p/plot1cell.md index 6c6f67ebe..d935aeb44 100644 --- a/docs/version-specific/supported-software/p/plot1cell.md +++ b/docs/version-specific/supported-software/p/plot1cell.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # plot1cell plot1cell: a package for advanced single cell data visualization @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.0.1`` | ``-R-4.2.1`` | ``foss/2022a`` ``0.0.1`` | ``-R-4.2.2`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/plotly-orca.md b/docs/version-specific/supported-software/p/plotly-orca.md index d153e031d..2f842bc88 100644 --- a/docs/version-specific/supported-software/p/plotly-orca.md +++ b/docs/version-specific/supported-software/p/plotly-orca.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # plotly-orca Orca is an Electron app that generates images and reports of Plotly things like plotly.js graphs, dash apps, dashboards from the command line. @@ -9,3 +13,6 @@ version | toolchain ``1.3.0`` | ``GCCcore/8.3.0`` ``1.3.1`` | ``GCCcore/10.2.0`` ``1.3.1`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/plotly.md b/docs/version-specific/supported-software/p/plotly.md index 8cb819da7..5e58281f0 100644 --- a/docs/version-specific/supported-software/p/plotly.md +++ b/docs/version-specific/supported-software/p/plotly.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # plotly Easily translate 'ggplot2' graphs to an interactive web-based version and/or create custom web-based visualizations directly from R. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``4.7.1`` | ``-R-3.4.0`` | ``intel/2017a`` ``4.8.0`` | ``-R-3.4.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/plotly.py.md b/docs/version-specific/supported-software/p/plotly.py.md index 7c8e3a7b1..a334b8454 100644 --- a/docs/version-specific/supported-software/p/plotly.py.md +++ b/docs/version-specific/supported-software/p/plotly.py.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # plotly.py An open-source, interactive graphing library for Python @@ -17,3 +21,6 @@ version | toolchain ``5.16.0`` | ``GCCcore/12.3.0`` ``5.18.0`` | ``GCCcore/13.2.0`` ``5.4.0`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/plotutils.md b/docs/version-specific/supported-software/p/plotutils.md index 5b2547343..7a1b18e5c 100644 --- a/docs/version-specific/supported-software/p/plotutils.md +++ b/docs/version-specific/supported-software/p/plotutils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # plotutils The GNU plotutils package contains software for both programmers and technical users. Its centerpiece is libplot, a powerful C/C++ function library for exporting 2-D vector graphics in many file formats, both vector and bitmap. On the X Window System, it can also do 2-D vector graphics animations. libplot is device-independent, in the sense that its API (application programming interface) does not depend on the type of graphics file to be exported. A Postscript-like API is used both for file export and for graphics animations. A libplot programmer needs to learn only one API: not the details of many graphics file formats. @@ -7,3 +11,6 @@ The GNU plotutils package contains software for both programmers and technical version | toolchain --------|---------- ``2.6`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pmt.md b/docs/version-specific/supported-software/p/pmt.md index 1f1e799b8..2988e983f 100644 --- a/docs/version-specific/supported-software/p/pmt.md +++ b/docs/version-specific/supported-software/p/pmt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pmt PMT is a high-level software library capable of collecting power consumption measurements on various hardware. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``1.2.0`` | | ``GCCcore/11.3.0`` ``1.2.0`` | ``-CUDA-12.1.1`` | ``GCCcore/12.3.0`` ``1.2.0`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pmx.md b/docs/version-specific/supported-software/p/pmx.md index 4307b5c2c..78dbc8f03 100644 --- a/docs/version-specific/supported-software/p/pmx.md +++ b/docs/version-specific/supported-software/p/pmx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pmx pmx (formerly pymacs) is a small bunch of classes to read structure files such as pdb or gro and trajectory data in gromacs xtc format. Over the years it has been extended towards a versatile (bio-) molecular structure manipulation package with some additional functionalities, e.g. gromacs file parsers and scripts for setup and analysis of free energy calculations. @@ -7,3 +11,6 @@ pmx (formerly pymacs) is a small bunch of classes to read structure files such a version | versionsuffix | toolchain --------|---------------|---------- ``2.0`` | ``-Python-2.7.18`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pocl.md b/docs/version-specific/supported-software/p/pocl.md index 7c3b56f2b..1339c6e10 100644 --- a/docs/version-specific/supported-software/p/pocl.md +++ b/docs/version-specific/supported-software/p/pocl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pocl Pocl is a portable open source (MIT-licensed) implementation of the OpenCL standard @@ -21,3 +25,6 @@ version | versionsuffix | toolchain ``1.8`` | | ``GCC/11.3.0`` ``4.0`` | ``-CUDA-12.1.1`` | ``GCC/12.3.0`` ``4.0`` | | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pod5-file-format.md b/docs/version-specific/supported-software/p/pod5-file-format.md index 07317c5d8..f06d2f597 100644 --- a/docs/version-specific/supported-software/p/pod5-file-format.md +++ b/docs/version-specific/supported-software/p/pod5-file-format.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pod5-file-format POD5 is a file format for storing nanopore dna data in an easily accessible way. The format is able to be written in a streaming manner which allows a sequencing instrument to directly write the format. @@ -7,3 +11,6 @@ POD5 is a file format for storing nanopore dna data in an easily accessible way. version | toolchain --------|---------- ``0.1.8`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/poetry.md b/docs/version-specific/supported-software/p/poetry.md index 5c42381eb..85d4e53f5 100644 --- a/docs/version-specific/supported-software/p/poetry.md +++ b/docs/version-specific/supported-software/p/poetry.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # poetry Python packaging and dependency management made easy @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``1.5.1`` | | ``GCCcore/12.3.0`` ``1.6.1`` | | ``GCCcore/13.2.0`` ``1.7.1`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/polars.md b/docs/version-specific/supported-software/p/polars.md index 0f46843cd..776aae2ea 100644 --- a/docs/version-specific/supported-software/p/polars.md +++ b/docs/version-specific/supported-software/p/polars.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # polars Lightning-fast DataFrame library for Rust and Python. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.15.6`` | ``foss/2022a`` ``0.20.2`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/polymake.md b/docs/version-specific/supported-software/p/polymake.md index bf3129d37..3eb7198a7 100644 --- a/docs/version-specific/supported-software/p/polymake.md +++ b/docs/version-specific/supported-software/p/polymake.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # polymake polymake is open source software for research in polyhedral geometry. It deals with polytopes, polyhedra and fans as well as simplicial complexes, matroids, graphs, tropical hypersurfaces, and other objects. @@ -9,3 +13,6 @@ version | toolchain ``4.0r1`` | ``foss/2019b`` ``4.8`` | ``foss/2021b`` ``4.8`` | ``gfbf/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pomkl.md b/docs/version-specific/supported-software/p/pomkl.md index 368610bd1..5520efb0c 100644 --- a/docs/version-specific/supported-software/p/pomkl.md +++ b/docs/version-specific/supported-software/p/pomkl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pomkl Toolchain with PGI C, C++ and Fortran compilers, alongside Intel MKL & OpenMPI. @@ -9,3 +13,6 @@ version | toolchain ``2016.03`` | ``system`` ``2016.04`` | ``system`` ``2016.09`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pompi.md b/docs/version-specific/supported-software/p/pompi.md index d2db734cc..12a92d6d7 100644 --- a/docs/version-specific/supported-software/p/pompi.md +++ b/docs/version-specific/supported-software/p/pompi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pompi Toolchain with PGI C, C++ and Fortran compilers, alongside OpenMPI. @@ -9,3 +13,6 @@ version | toolchain ``2016.03`` | ``system`` ``2016.04`` | ``system`` ``2016.09`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/poppler.md b/docs/version-specific/supported-software/p/poppler.md index cafb1141c..7810d0760 100644 --- a/docs/version-specific/supported-software/p/poppler.md +++ b/docs/version-specific/supported-software/p/poppler.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # poppler Poppler is a PDF rendering library based on the xpdf-3.0 code base. @@ -14,3 +18,6 @@ version | toolchain ``22.12.0`` | ``GCC/11.3.0`` ``23.09.0`` | ``GCC/12.3.0`` ``24.04.0`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/poppunk.md b/docs/version-specific/supported-software/p/poppunk.md index b572f8892..10e90cb19 100644 --- a/docs/version-specific/supported-software/p/poppunk.md +++ b/docs/version-specific/supported-software/p/poppunk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # poppunk PopPUNK is a tool for clustering genomes. We refer to the clusters as variable-length-k-mer clusters, or VLKCs. Biologically, these clusters typically represent distinct strains. We refer to subclusters of strains as lineages. @@ -7,3 +11,6 @@ PopPUNK is a tool for clustering genomes. We refer to the clusters as variable- version | toolchain --------|---------- ``2.6.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/popscle.md b/docs/version-specific/supported-software/p/popscle.md index 0e74d2713..87a666e57 100644 --- a/docs/version-specific/supported-software/p/popscle.md +++ b/docs/version-specific/supported-software/p/popscle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # popscle A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and auxilary tools @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.1-beta-20210505`` | ``GCC/11.3.0`` ``0.1-beta`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/popt.md b/docs/version-specific/supported-software/p/popt.md index 8232ed4dc..05605eab8 100644 --- a/docs/version-specific/supported-software/p/popt.md +++ b/docs/version-specific/supported-software/p/popt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # popt Popt is a C library for parsing command line parameters. @@ -10,3 +14,6 @@ version | toolchain ``1.16`` | ``GCC/10.2.0`` ``1.16`` | ``GCC/4.9.2`` ``1.16`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/porefoam.md b/docs/version-specific/supported-software/p/porefoam.md index 6ed76437f..17179a75f 100644 --- a/docs/version-specific/supported-software/p/porefoam.md +++ b/docs/version-specific/supported-software/p/porefoam.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # porefoam Direct pore-scale simulation of single- and two-phase flow through confined media @@ -7,3 +11,6 @@ Direct pore-scale simulation of single- and two-phase flow through confined medi version | toolchain --------|---------- ``2021-09-21`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/poretools.md b/docs/version-specific/supported-software/p/poretools.md index 0035208ce..81e17fc54 100644 --- a/docs/version-specific/supported-software/p/poretools.md +++ b/docs/version-specific/supported-software/p/poretools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # poretools A toolkit for working with nanopore sequencing data from Oxford Nanopore. @@ -7,3 +11,6 @@ A toolkit for working with nanopore sequencing data from Oxford Nanopore. version | versionsuffix | toolchain --------|---------------|---------- ``0.6.0`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/powerlaw.md b/docs/version-specific/supported-software/p/powerlaw.md index 3e97dfdfc..42bbcb82c 100644 --- a/docs/version-specific/supported-software/p/powerlaw.md +++ b/docs/version-specific/supported-software/p/powerlaw.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # powerlaw powerlaw: A Python Package for Analysis of Heavy-Tailed Distributions @@ -7,3 +11,6 @@ powerlaw: A Python Package for Analysis of Heavy-Tailed Distributions version | toolchain --------|---------- ``1.5`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pp-sketchlib.md b/docs/version-specific/supported-software/p/pp-sketchlib.md index 0435d8c8e..f9283fc00 100644 --- a/docs/version-specific/supported-software/p/pp-sketchlib.md +++ b/docs/version-specific/supported-software/p/pp-sketchlib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pp-sketchlib Library of sketching functions used by PopPUNK @@ -7,3 +11,6 @@ Library of sketching functions used by PopPUNK version | toolchain --------|---------- ``2.1.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/ppl.md b/docs/version-specific/supported-software/p/ppl.md index 076280b7b..c534093db 100644 --- a/docs/version-specific/supported-software/p/ppl.md +++ b/docs/version-specific/supported-software/p/ppl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ppl The Parma Polyhedra Library (PPL) provides numerical abstractions especially targeted at applications in the field of analysis and verification of complex systems. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.2`` | ``GCCcore/11.3.0`` ``1.2`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pplacer.md b/docs/version-specific/supported-software/p/pplacer.md index 44e51c9c4..fdba8177d 100644 --- a/docs/version-specific/supported-software/p/pplacer.md +++ b/docs/version-specific/supported-software/p/pplacer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pplacer Pplacer places query sequences on a fixed reference phylogenetic tree to maximize phylogenetic likelihood or posterior probability according to a reference alignment. Pplacer is designed to be fast, to give useful information about uncertainty, and to offer advanced visualization and downstream analysis. @@ -7,3 +11,6 @@ Pplacer places query sequences on a fixed reference phylogenetic tree to maximiz version | toolchain --------|---------- ``1.1.alpha19`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pplpy.md b/docs/version-specific/supported-software/p/pplpy.md index 6c9295d69..1a0744da7 100644 --- a/docs/version-specific/supported-software/p/pplpy.md +++ b/docs/version-specific/supported-software/p/pplpy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pplpy This Python package provides a wrapper to the C++ Parma Polyhedra Library (PPL). @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.8.4`` | ``-Python-2.7.14`` | ``intel/2017b`` ``0.8.4`` | ``-Python-3.6.3`` | ``intel/2017b`` ``0.8.9`` | | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/preCICE.md b/docs/version-specific/supported-software/p/preCICE.md index ab58f52b6..35e3ab733 100644 --- a/docs/version-specific/supported-software/p/preCICE.md +++ b/docs/version-specific/supported-software/p/preCICE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # preCICE preCICE (Precise Code Interaction Coupling Environment) is a coupling library for partitioned multi-physics simulations, including, but not restricted to fluid-structure interaction and conjugate heat transfer simulations. Partitioned means that preCICE couples existing programs (solvers) capable of simulating a subpart of the complete physics involved in a simulation. This allows for the high flexibility that is needed to keep a decent time-to-solution for complex multi-physics scenarios. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.2.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``2.2.0`` | ``-Python-3.8.2`` | ``intel/2020a`` ``2.5.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/premailer.md b/docs/version-specific/supported-software/p/premailer.md index e7cbafbcc..9f9c4e9a0 100644 --- a/docs/version-specific/supported-software/p/premailer.md +++ b/docs/version-specific/supported-software/p/premailer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # premailer CSS blocks into inline style attributes for HTML emails @@ -7,3 +11,6 @@ CSS blocks into inline style attributes for HTML emails version | toolchain --------|---------- ``3.10.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/preseq.md b/docs/version-specific/supported-software/p/preseq.md index 0b5049740..a9c756a99 100644 --- a/docs/version-specific/supported-software/p/preseq.md +++ b/docs/version-specific/supported-software/p/preseq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # preseq Software for predicting library complexity and genome coverage in high-throughput sequencing. @@ -13,3 +17,6 @@ version | toolchain ``3.1.2`` | ``GCC/11.2.0`` ``3.2.0`` | ``GCC/11.3.0`` ``3.2.0`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/presto.md b/docs/version-specific/supported-software/p/presto.md index 86db2bd63..a2c5f489a 100644 --- a/docs/version-specific/supported-software/p/presto.md +++ b/docs/version-specific/supported-software/p/presto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # presto Presto performs a fast Wilcoxon rank sum test and auROC analysis. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.0.0-20230113`` | ``-R-4.2.1`` | ``foss/2022a`` ``1.0.0-20230501`` | ``-R-4.2.2`` | ``foss/2022b`` ``1.0.0-20230501`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pretty-yaml.md b/docs/version-specific/supported-software/p/pretty-yaml.md index 6ccdc29cf..2d60fd506 100644 --- a/docs/version-specific/supported-software/p/pretty-yaml.md +++ b/docs/version-specific/supported-software/p/pretty-yaml.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pretty-yaml PyYAML-based python module to produce pretty and readable YAML-serialized data. This module is for serialization only, see ruamel.yaml module for literate YAML parsing (keeping track of comments, spacing, line/column numbers of values, etc). @@ -10,3 +14,6 @@ version | toolchain ``20.4.0`` | ``GCCcore/9.3.0`` ``21.10.1`` | ``GCCcore/10.3.0`` ``23.9.5`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/primecount.md b/docs/version-specific/supported-software/p/primecount.md index b57c8e14d..c940c126a 100644 --- a/docs/version-specific/supported-software/p/primecount.md +++ b/docs/version-specific/supported-software/p/primecount.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # primecount primecount is a command-line program and C/C++ library that counts the number of primes ≤ x (maximum 1031) using highly optimized implementations of the combinatorial prime counting algorithms. @@ -7,3 +11,6 @@ primecount is a command-line program and C/C++ library that counts the number of version | toolchain --------|---------- ``7.9`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/primecountpy.md b/docs/version-specific/supported-software/p/primecountpy.md index b593775d7..d6e62f11d 100644 --- a/docs/version-specific/supported-software/p/primecountpy.md +++ b/docs/version-specific/supported-software/p/primecountpy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # primecountpy This is a Cython interface to the C++ library primecount. @@ -7,3 +11,6 @@ This is a Cython interface to the C++ library primecount. version | toolchain --------|---------- ``0.1.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/printproto.md b/docs/version-specific/supported-software/p/printproto.md index d38d88166..f83049d78 100644 --- a/docs/version-specific/supported-software/p/printproto.md +++ b/docs/version-specific/supported-software/p/printproto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # printproto X.org PrintProto protocol headers. @@ -7,3 +11,6 @@ X.org PrintProto protocol headers. version | toolchain --------|---------- ``1.0.5`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/prodigal.md b/docs/version-specific/supported-software/p/prodigal.md index 62094ede4..b812cf878 100644 --- a/docs/version-specific/supported-software/p/prodigal.md +++ b/docs/version-specific/supported-software/p/prodigal.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # prodigal Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal) gene finding program developed at Oak Ridge National Laboratory and the University of Tennessee. @@ -18,3 +22,6 @@ version | toolchain ``2.6.3`` | ``GCCcore/8.2.0`` ``2.6.3`` | ``GCCcore/8.3.0`` ``2.6.3`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/prokka.md b/docs/version-specific/supported-software/p/prokka.md index bfe38cc5a..47a8ccd67 100644 --- a/docs/version-specific/supported-software/p/prokka.md +++ b/docs/version-specific/supported-software/p/prokka.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # prokka Prokka is a software tool for the rapid annotation of prokaryotic genomes. @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``1.14.5`` | | ``gompi/2021b`` ``1.14.5`` | | ``gompi/2022a`` ``1.14.5`` | | ``gompi/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/prompt-toolkit.md b/docs/version-specific/supported-software/p/prompt-toolkit.md index 17a15d733..ad09924db 100644 --- a/docs/version-specific/supported-software/p/prompt-toolkit.md +++ b/docs/version-specific/supported-software/p/prompt-toolkit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # prompt-toolkit prompt_toolkit is a Python library for building powerful interactive command lines and terminal applications. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``1.0.6`` | ``-Python-3.5.2`` | ``intel/2016b`` ``3.0.36`` | | ``GCCcore/12.2.0`` ``3.0.36`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/proovread.md b/docs/version-specific/supported-software/p/proovread.md index 5121eb5cf..156173c15 100644 --- a/docs/version-specific/supported-software/p/proovread.md +++ b/docs/version-specific/supported-software/p/proovread.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # proovread PacBio hybrid error correction through iterative short read consensus @@ -7,3 +11,6 @@ PacBio hybrid error correction through iterative short read consensus version | toolchain --------|---------- ``2.14.1`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/propy.md b/docs/version-specific/supported-software/p/propy.md index 9b917a70a..e1ef56e63 100644 --- a/docs/version-specific/supported-software/p/propy.md +++ b/docs/version-specific/supported-software/p/propy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # propy Propy is a protein description software. It allows analyzing sequence-derived structural and physicochemical features, which are very useful in representing and distinguishing proteins or peptides of different structural, functional and interaction properties. These have been widely used in developing methods and software for predicting protein structural and functional classes, protein-protein interactions, drug-target interactions, protein substrates, among others. @@ -7,3 +11,6 @@ Propy is a protein description software. It allows analyzing sequence-derived st version | versionsuffix | toolchain --------|---------------|---------- ``1.0`` | ``-Python-2.7.13`` | ``foss/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/protobuf-python.md b/docs/version-specific/supported-software/p/protobuf-python.md index 0f3d9e1d1..0e558e443 100644 --- a/docs/version-specific/supported-software/p/protobuf-python.md +++ b/docs/version-specific/supported-software/p/protobuf-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # protobuf-python Python Protocol Buffers runtime library. @@ -33,3 +37,6 @@ version | versionsuffix | toolchain ``4.23.0`` | | ``GCCcore/12.2.0`` ``4.24.0`` | | ``GCCcore/12.3.0`` ``4.25.3`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/protobuf.md b/docs/version-specific/supported-software/p/protobuf.md index c1640230f..44928baae 100644 --- a/docs/version-specific/supported-software/p/protobuf.md +++ b/docs/version-specific/supported-software/p/protobuf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # protobuf Google Protocol Buffers @@ -36,3 +40,6 @@ version | toolchain ``3.6.1.2`` | ``GCCcore/8.2.0`` ``3.7.1`` | ``GCCcore/8.2.0`` ``3.7.1`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/protozero.md b/docs/version-specific/supported-software/p/protozero.md index 0d3103096..5d5a37951 100644 --- a/docs/version-specific/supported-software/p/protozero.md +++ b/docs/version-specific/supported-software/p/protozero.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # protozero Minimalistic protocol buffer decoder and encoder in C++. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.6.8`` | ``GCCcore/7.3.0`` ``1.7.0`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pscom.md b/docs/version-specific/supported-software/p/pscom.md index cd3109dc1..3ddf0ad76 100644 --- a/docs/version-specific/supported-software/p/pscom.md +++ b/docs/version-specific/supported-software/p/pscom.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pscom ParaStation is a robust and efficient cluster middleware, consisting of a high-performance communication layer (MPI) and a sophisticated management layer. @@ -9,3 +13,6 @@ version | toolchain ``5.0.43`` | ``GCC/4.8.2`` ``5.0.44-1`` | ``GCC/4.9.2`` ``5.0.48-1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/psmc.md b/docs/version-specific/supported-software/p/psmc.md index 2d5f62637..5d9fd6aff 100644 --- a/docs/version-specific/supported-software/p/psmc.md +++ b/docs/version-specific/supported-software/p/psmc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # psmc This software package infers population size history from a diploid sequence using the Pairwise Sequentially Markovian Coalescent (PSMC) model. @@ -9,3 +13,6 @@ version | toolchain ``0.6.5`` | ``foss/2016a`` ``0.6.5`` | ``foss/2018a`` ``0.6.5_20221121`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/psmpi.md b/docs/version-specific/supported-software/p/psmpi.md index 8373b524f..28ce7512e 100644 --- a/docs/version-specific/supported-software/p/psmpi.md +++ b/docs/version-specific/supported-software/p/psmpi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # psmpi ParaStation MPI is an open source high-performance MPI 3.0 implementation, based on MPICH v3. It provides extra low level communication libraries and integration with various batch systems for tighter process control. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``5.1.0-1`` | | ``GCC/4.9.2`` ``5.1.5-1`` | ``-mt`` | ``GCC/4.9.3`` ``5.1.5-1`` | | ``GCC/4.9.3`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/psmpi2.md b/docs/version-specific/supported-software/p/psmpi2.md index 039a1402b..c4ec761c0 100644 --- a/docs/version-specific/supported-software/p/psmpi2.md +++ b/docs/version-specific/supported-software/p/psmpi2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # psmpi2 ParaStation is a robust and efficient cluster middleware, consisting of a high-performance communication layer (MPI) and a sophisticated management layer. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``5.0.29`` | ``-mt`` | ``GCC/4.8.2`` ``5.0.29`` | | ``GCC/4.8.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/psrecord.md b/docs/version-specific/supported-software/p/psrecord.md index 37361ff7f..3b2d25a6e 100644 --- a/docs/version-specific/supported-software/p/psrecord.md +++ b/docs/version-specific/supported-software/p/psrecord.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # psrecord psrecord is a small utility that uses the psutil library to record the CPU and memory activity of a process. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.1`` | ``-Python-3.6.4`` | ``intel/2018a`` ``1.1`` | ``-Python-2.7.15`` | ``intel/2018b`` ``1.1`` | ``-Python-3.6.6`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pstoedit.md b/docs/version-specific/supported-software/p/pstoedit.md index 629120037..3b33598fd 100644 --- a/docs/version-specific/supported-software/p/pstoedit.md +++ b/docs/version-specific/supported-software/p/pstoedit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pstoedit pstoedit translates PostScript and PDF graphics into other vector formats @@ -9,3 +13,6 @@ version | toolchain ``3.70`` | ``GCCcore/6.3.0`` ``3.70`` | ``GCCcore/6.4.0`` ``3.78`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/psutil.md b/docs/version-specific/supported-software/p/psutil.md index f26e9265e..3cb014852 100644 --- a/docs/version-specific/supported-software/p/psutil.md +++ b/docs/version-specific/supported-software/p/psutil.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # psutil A cross-platform process and system utilities module for Python @@ -19,3 +23,6 @@ version | versionsuffix | toolchain ``5.9.4`` | | ``GCCcore/11.2.0`` ``5.9.5`` | | ``GCCcore/12.2.0`` ``5.9.8`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/psycopg.md b/docs/version-specific/supported-software/p/psycopg.md index 22e380063..34dd6ebd4 100644 --- a/docs/version-specific/supported-software/p/psycopg.md +++ b/docs/version-specific/supported-software/p/psycopg.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # psycopg Psycopg is the most popular PostgreSQL adapter for the Python programming language. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.1.18`` | ``GCCcore/12.2.0`` ``3.1.18`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/psycopg2.md b/docs/version-specific/supported-software/p/psycopg2.md index f9472ea35..039e799cc 100644 --- a/docs/version-specific/supported-software/p/psycopg2.md +++ b/docs/version-specific/supported-software/p/psycopg2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # psycopg2 Psycopg is the most popular PostgreSQL adapter for the Python programming language. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``2.9.5`` | | ``GCCcore/11.2.0`` ``2.9.6`` | | ``GCCcore/11.3.0`` ``2.9.9`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/ptemcee.md b/docs/version-specific/supported-software/p/ptemcee.md index fa715a7ed..eb87b1342 100644 --- a/docs/version-specific/supported-software/p/ptemcee.md +++ b/docs/version-specific/supported-software/p/ptemcee.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ptemcee ptemcee, pronounced "tem-cee", is fork of Daniel Foreman-Mackey's wonderful emcee to implement parallel tempering more robustly. If you're trying to characterise awkward, multi-model probability distributions, then ptemcee is your friend. @@ -7,3 +11,6 @@ ptemcee, pronounced "tem-cee", is fork of Daniel Foreman-Mackey's wonderful emce version | toolchain --------|---------- ``1.0.0`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pubtcrs.md b/docs/version-specific/supported-software/p/pubtcrs.md index 92959752e..d2ac0cba6 100644 --- a/docs/version-specific/supported-software/p/pubtcrs.md +++ b/docs/version-specific/supported-software/p/pubtcrs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pubtcrs This repository contains C++ source code for the TCR clustering and correlation analyses described in the manuscript "Human T cell receptor occurrence patterns encode immune history, genetic background, and receptor specificity" by William S DeWitt III, Anajane Smith, Gary Schoch, John A Hansen, Frederick A Matsen IV and Philip Bradley, available on bioRxiv. @@ -7,3 +11,6 @@ This repository contains C++ source code for the TCR clustering and correlation version | toolchain --------|---------- ``20180622`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pugixml.md b/docs/version-specific/supported-software/p/pugixml.md index 635e3f8d6..53cd41b22 100644 --- a/docs/version-specific/supported-software/p/pugixml.md +++ b/docs/version-specific/supported-software/p/pugixml.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pugixml pugixml is a light-weight C++ XML processing library @@ -9,3 +13,6 @@ version | toolchain ``1.11.4`` | ``GCCcore/10.3.0`` ``1.12.1`` | ``GCCcore/11.2.0`` ``1.12.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pullseq.md b/docs/version-specific/supported-software/p/pullseq.md index 7a294aa98..fdee3bf15 100644 --- a/docs/version-specific/supported-software/p/pullseq.md +++ b/docs/version-specific/supported-software/p/pullseq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pullseq Utility program for extracting sequences from a fasta/fastq file @@ -9,3 +13,6 @@ version | toolchain ``1.0.2`` | ``GCCcore/10.3.0`` ``1.0.2`` | ``GCCcore/11.2.0`` ``1.0.2`` | ``GCCcore/7.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/purge_dups.md b/docs/version-specific/supported-software/p/purge_dups.md index 276900199..917551609 100644 --- a/docs/version-specific/supported-software/p/purge_dups.md +++ b/docs/version-specific/supported-software/p/purge_dups.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # purge_dups purge haplotigs and overlaps in an assembly based on read depth @@ -7,3 +11,6 @@ purge haplotigs and overlaps in an assembly based on read depth version | toolchain --------|---------- ``1.2.5`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pv.md b/docs/version-specific/supported-software/p/pv.md index 1512ea71a..56464584e 100644 --- a/docs/version-specific/supported-software/p/pv.md +++ b/docs/version-specific/supported-software/p/pv.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pv Pipe Viewer - monitor the progress of data through a pipe @@ -7,3 +11,6 @@ Pipe Viewer - monitor the progress of data through a pipe version | toolchain --------|---------- ``1.7.24`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/py-aiger-bdd.md b/docs/version-specific/supported-software/p/py-aiger-bdd.md index 90d3483af..c6194cb34 100644 --- a/docs/version-specific/supported-software/p/py-aiger-bdd.md +++ b/docs/version-specific/supported-software/p/py-aiger-bdd.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # py-aiger-bdd Aiger to BDD bridge. @@ -7,3 +11,6 @@ Aiger to BDD bridge. version | versionsuffix | toolchain --------|---------------|---------- ``3.0.0`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/py-aiger.md b/docs/version-specific/supported-software/p/py-aiger.md index 1b819dae6..4c0cd79a9 100644 --- a/docs/version-specific/supported-software/p/py-aiger.md +++ b/docs/version-specific/supported-software/p/py-aiger.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # py-aiger A python library for manipulating sequential and combinatorial circuits. This module provides the py-aiger extensions: aiger_bv, aiger_cnf, aiger_ptltl, aiger_coins, aiger_gridworld, aiger_dfa @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``6.1.1`` | ``-Python-3.8.2`` | ``GCCcore/9.3.0`` ``6.1.14`` | | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/py-c3d.md b/docs/version-specific/supported-software/p/py-c3d.md index 4c369bb8c..d144c688c 100644 --- a/docs/version-specific/supported-software/p/py-c3d.md +++ b/docs/version-specific/supported-software/p/py-c3d.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # py-c3d This is a small library for reading and writing C3D binary files. C3D files are a standard format for recording 3-dimensional time sequence data, especially data recorded by a 3D motion tracking apparatus. @@ -7,3 +11,6 @@ This is a small library for reading and writing C3D binary files. C3D files are version | toolchain --------|---------- ``0.5.2`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/py-cpuinfo.md b/docs/version-specific/supported-software/p/py-cpuinfo.md index ae6a1eff4..63231c9a4 100644 --- a/docs/version-specific/supported-software/p/py-cpuinfo.md +++ b/docs/version-specific/supported-software/p/py-cpuinfo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # py-cpuinfo py-cpuinfo gets CPU info with pure Python. @@ -13,3 +17,6 @@ version | toolchain ``9.0.0`` | ``GCCcore/12.2.0`` ``9.0.0`` | ``GCCcore/12.3.0`` ``9.0.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/py.md b/docs/version-specific/supported-software/p/py.md index 0f4ec531e..cdad9cac8 100644 --- a/docs/version-specific/supported-software/p/py.md +++ b/docs/version-specific/supported-software/p/py.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # py library with cross-python path, ini-parsing, io, code, log facilities @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.4.31`` | ``-Python-2.7.11`` | ``foss/2016a`` ``1.4.31`` | ``-Python-3.5.1`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/py3Dmol.md b/docs/version-specific/supported-software/p/py3Dmol.md index 4a0a5484a..a642e8b88 100644 --- a/docs/version-specific/supported-software/p/py3Dmol.md +++ b/docs/version-specific/supported-software/p/py3Dmol.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # py3Dmol A simple IPython/Jupyter widget to embed an interactive 3Dmol.js viewer in a notebook. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.0.1.post1`` | ``GCCcore/11.3.0`` ``2.1.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyABC.md b/docs/version-specific/supported-software/p/pyABC.md index 840cbd02a..1b18eac04 100644 --- a/docs/version-specific/supported-software/p/pyABC.md +++ b/docs/version-specific/supported-software/p/pyABC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyABC Massively parallel, distributed and scalable ABC-SMC (Approximate Bayesian Computation - Sequential Monte Carlo) for parameter estimation of complex stochastic models. Implemented in Python with support of the R language. @@ -7,3 +11,6 @@ Massively parallel, distributed and scalable ABC-SMC (Approximate Bayesian Compu version | versionsuffix | toolchain --------|---------------|---------- ``0.10.4`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyBigWig.md b/docs/version-specific/supported-software/p/pyBigWig.md index 3bcf86965..62721e653 100644 --- a/docs/version-specific/supported-software/p/pyBigWig.md +++ b/docs/version-specific/supported-software/p/pyBigWig.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyBigWig A python extension, written in C, for quick access to bigBed files and access to and creation of bigWig files. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``0.3.18`` | | ``foss/2022a`` ``0.3.22`` | | ``foss/2022b`` ``0.3.22`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyEGA3.md b/docs/version-specific/supported-software/p/pyEGA3.md index 209d1fb3d..229e00e19 100644 --- a/docs/version-specific/supported-software/p/pyEGA3.md +++ b/docs/version-specific/supported-software/p/pyEGA3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyEGA3 A basic Python-based EGA download client @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``3.4.0`` | ``-Python-3.8.2`` | ``GCCcore/9.3.0`` ``4.0.0`` | | ``GCCcore/11.2.0`` ``5.0.2`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyFAI.md b/docs/version-specific/supported-software/p/pyFAI.md index 5b288b119..1f7113ebe 100644 --- a/docs/version-specific/supported-software/p/pyFAI.md +++ b/docs/version-specific/supported-software/p/pyFAI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyFAI Python implementation of fast azimuthal integration. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.20.0`` | | ``foss/2020b`` ``0.20.0`` | | ``fosscuda/2020b`` ``0.21.3`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyFFTW.md b/docs/version-specific/supported-software/p/pyFFTW.md index f2b01975c..2ebba46e7 100644 --- a/docs/version-specific/supported-software/p/pyFFTW.md +++ b/docs/version-specific/supported-software/p/pyFFTW.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyFFTW A pythonic wrapper around FFTW, the FFT library, presenting a unified interface for all the supported transforms. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.12.0`` | | ``foss/2020b`` ``0.12.0`` | | ``fosscuda/2020b`` ``0.13.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyGAM.md b/docs/version-specific/supported-software/p/pyGAM.md index 91f058762..440bedbb0 100644 --- a/docs/version-specific/supported-software/p/pyGAM.md +++ b/docs/version-specific/supported-software/p/pyGAM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyGAM pyGAM is a package for building Generalized Additive Models in Python, with an emphasis on modularity and performance. The API will be immediately familiar to anyone with experience of scikit-learn or scipy. @@ -7,3 +11,6 @@ pyGAM is a package for building Generalized Additive Models in Python, with an e version | toolchain --------|---------- ``0.9.1`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyGIMLi.md b/docs/version-specific/supported-software/p/pyGIMLi.md index 4da95762a..6e0e258a3 100644 --- a/docs/version-specific/supported-software/p/pyGIMLi.md +++ b/docs/version-specific/supported-software/p/pyGIMLi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyGIMLi pyGIMLi is an open-source multi-method library for solving inverse and forward tasks related to geophysical problems. Written in C++ and Python, it offers both efficiency and flexibility allowing you to quickly build your own robust inversion applications for the geophysical problem at hand. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``20160803`` | ``-Python-2.7.11`` | ``foss/2016a`` ``20160803`` | ``-Python-3.5.1`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyGenomeTracks.md b/docs/version-specific/supported-software/p/pyGenomeTracks.md index a9eec4510..4f08067e3 100644 --- a/docs/version-specific/supported-software/p/pyGenomeTracks.md +++ b/docs/version-specific/supported-software/p/pyGenomeTracks.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyGenomeTracks pyGenomeTracks aims to produce high-quality genome browser tracks that are highly customizable. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.7`` | ``foss/2021b`` ``3.8`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyMannKendall.md b/docs/version-specific/supported-software/p/pyMannKendall.md index e35b064ef..77521efc9 100644 --- a/docs/version-specific/supported-software/p/pyMannKendall.md +++ b/docs/version-specific/supported-software/p/pyMannKendall.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyMannKendall A python package for non parametric Mann Kendall family of trend tests. @@ -7,3 +11,6 @@ A python package for non parametric Mann Kendall family of trend tests. version | toolchain --------|---------- ``1.4.3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pySCENIC.md b/docs/version-specific/supported-software/p/pySCENIC.md index b02af41d6..f60dbdacb 100644 --- a/docs/version-specific/supported-software/p/pySCENIC.md +++ b/docs/version-specific/supported-software/p/pySCENIC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pySCENIC pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.10.3`` | ``-Python-3.8.2`` | ``intel/2020a`` ``0.12.1-20240311`` | | ``foss/2023a`` ``0.12.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyScaf.md b/docs/version-specific/supported-software/p/pyScaf.md index 023d53120..d02c161c0 100644 --- a/docs/version-specific/supported-software/p/pyScaf.md +++ b/docs/version-specific/supported-software/p/pyScaf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyScaf pyScaf orders contigs from genome assemblies utilising several types of information @@ -7,3 +11,6 @@ pyScaf orders contigs from genome assemblies utilising several types of informat version | versionsuffix | toolchain --------|---------------|---------- ``0.12a4`` | ``-Python-2.7.14`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyWannier90.md b/docs/version-specific/supported-software/p/pyWannier90.md index 034016e31..7318cb9bd 100644 --- a/docs/version-specific/supported-software/p/pyWannier90.md +++ b/docs/version-specific/supported-software/p/pyWannier90.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyWannier90 A Wannier90 Python interface for VASP and PySCF @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2021-12-07`` | ``foss/2021a`` ``2021-12-07`` | ``gomkl/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyXDF.md b/docs/version-specific/supported-software/p/pyXDF.md index 15d036c43..a68f80d50 100644 --- a/docs/version-specific/supported-software/p/pyXDF.md +++ b/docs/version-specific/supported-software/p/pyXDF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyXDF Python package for working with XDF files. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.16.3`` | ``foss/2021a`` ``1.16.5`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pybedtools.md b/docs/version-specific/supported-software/p/pybedtools.md index 55ed85cba..b7ed51fdd 100644 --- a/docs/version-specific/supported-software/p/pybedtools.md +++ b/docs/version-specific/supported-software/p/pybedtools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pybedtools pybedtools wraps and extends BEDTools and offers feature-level manipulations from within Python. @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``0.9.0`` | | ``GCC/11.3.0`` ``0.9.0`` | | ``GCC/12.2.0`` ``0.9.1`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pybind11-stubgen.md b/docs/version-specific/supported-software/p/pybind11-stubgen.md index 1ff14645e..ebb15a100 100644 --- a/docs/version-specific/supported-software/p/pybind11-stubgen.md +++ b/docs/version-specific/supported-software/p/pybind11-stubgen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pybind11-stubgen Static analysis tools and IDE usually struggle to understand python binary extensions. pybind11-stubgen generates stubs for python extensions to make them less opaque. While the CLI tool includes tweaks to target modules compiled specifically with pybind11 but it should work well with modules built with other libraries. @@ -7,3 +11,6 @@ Static analysis tools and IDE usually struggle to understand python binary version | toolchain --------|---------- ``2.5.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pybind11.md b/docs/version-specific/supported-software/p/pybind11.md index 32fdb3bb5..1d0165c1d 100644 --- a/docs/version-specific/supported-software/p/pybind11.md +++ b/docs/version-specific/supported-software/p/pybind11.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pybind11 pybind11 is a lightweight header-only library that exposes C++ types in Python and vice versa, mainly to create Python bindings of existing C++ code. @@ -18,3 +22,6 @@ version | versionsuffix | toolchain ``2.7.1`` | ``-Python-2.7.18`` | ``GCCcore/11.2.0`` ``2.7.1`` | | ``GCCcore/11.2.0`` ``2.9.2`` | | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pybinding.md b/docs/version-specific/supported-software/p/pybinding.md index 883dc69c4..e66190e2d 100644 --- a/docs/version-specific/supported-software/p/pybinding.md +++ b/docs/version-specific/supported-software/p/pybinding.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pybinding Pybinding is a Python package for numerical tight-binding calculations in solid state physics. @@ -7,3 +11,6 @@ Pybinding is a Python package for numerical tight-binding calculations in solid version | toolchain --------|---------- ``0.9.5`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyccel.md b/docs/version-specific/supported-software/p/pyccel.md index 285620cc9..5c9381519 100644 --- a/docs/version-specific/supported-software/p/pyccel.md +++ b/docs/version-specific/supported-software/p/pyccel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyccel Python extension language using accelerators @@ -7,3 +11,6 @@ Python extension language using accelerators version | toolchain --------|---------- ``1.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pycma.md b/docs/version-specific/supported-software/p/pycma.md index 29705d048..01d9f074a 100644 --- a/docs/version-specific/supported-software/p/pycma.md +++ b/docs/version-specific/supported-software/p/pycma.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pycma A stochastic numerical optimization algorithm for difficult (non-convex, ill-conditioned, multi-modal, rugged, noisy) optimization problems in continuous search spaces, implemented in Python. @@ -7,3 +11,6 @@ A stochastic numerical optimization algorithm for difficult (non-convex, ill-con version | toolchain --------|---------- ``2.7.0`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pycoQC.md b/docs/version-specific/supported-software/p/pycoQC.md index 482e83776..c6c1ed7c4 100644 --- a/docs/version-specific/supported-software/p/pycoQC.md +++ b/docs/version-specific/supported-software/p/pycoQC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pycoQC PycoQC computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data. @@ -7,3 +11,6 @@ PycoQC computes metrics and generates interactive QC plots for Oxford Nanopore version | toolchain --------|---------- ``2.5.2`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pycocotools.md b/docs/version-specific/supported-software/p/pycocotools.md index a67f93325..7986b13cf 100644 --- a/docs/version-specific/supported-software/p/pycocotools.md +++ b/docs/version-specific/supported-software/p/pycocotools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pycocotools Tools for working with the MSCOCO dataset @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``2.0.2`` | ``-Python-3.8.2`` | ``fosscuda/2020a`` ``2.0.4`` | | ``foss/2021a`` ``2.0.6`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pycodestyle.md b/docs/version-specific/supported-software/p/pycodestyle.md index 9d0dc31a8..b8ae0a10a 100644 --- a/docs/version-specific/supported-software/p/pycodestyle.md +++ b/docs/version-specific/supported-software/p/pycodestyle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pycodestyle pycodestyle is a tool to check your Python code against some of the style conventions in PEP 8. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.11.1`` | | ``foss/2022a`` ``2.11.1`` | | ``foss/2023a`` ``2.5.0`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pycubescd.md b/docs/version-specific/supported-software/p/pycubescd.md index b584656ca..bac87424c 100644 --- a/docs/version-specific/supported-software/p/pycubescd.md +++ b/docs/version-specific/supported-software/p/pycubescd.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pycubescd Charge-displacement analysis via natural orbitals for chemical valence in the four-component relativistic framework @@ -7,3 +11,6 @@ Charge-displacement analysis via natural orbitals for chemical valence in the fo version | toolchain --------|---------- ``20220704`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pydantic.md b/docs/version-specific/supported-software/p/pydantic.md index 030ef8b45..65c260367 100644 --- a/docs/version-specific/supported-software/p/pydantic.md +++ b/docs/version-specific/supported-software/p/pydantic.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pydantic Data validation and settings management using Python type hinting. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``2.5.3`` | | ``GCCcore/12.2.0`` ``2.5.3`` | | ``GCCcore/12.3.0`` ``2.6.4`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pydicom-seg.md b/docs/version-specific/supported-software/p/pydicom-seg.md index a1a8d1670..525a07908 100644 --- a/docs/version-specific/supported-software/p/pydicom-seg.md +++ b/docs/version-specific/supported-software/p/pydicom-seg.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pydicom-seg Reading and writing of DICOM-SEG medical image segmentation storage files using pydicom as DICOM serialization/deserialization library. @@ -7,3 +11,6 @@ Reading and writing of DICOM-SEG medical image segmentation storage files using version | toolchain --------|---------- ``0.4.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pydicom.md b/docs/version-specific/supported-software/p/pydicom.md index a66452e41..7e75e5c80 100644 --- a/docs/version-specific/supported-software/p/pydicom.md +++ b/docs/version-specific/supported-software/p/pydicom.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pydicom Read, modify and write DICOM files with python code @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``2.2.2`` | | ``GCCcore/11.2.0`` ``2.3.0`` | | ``GCCcore/11.3.0`` ``2.4.4`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pydlpoly.md b/docs/version-specific/supported-software/p/pydlpoly.md index 759dae2e7..60008579f 100644 --- a/docs/version-specific/supported-software/p/pydlpoly.md +++ b/docs/version-specific/supported-software/p/pydlpoly.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pydlpoly Pydlpoly is a molecular dynamics simulation package which is a modified version of DL-POLY with a Python language interface. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``20150225`` | ``-Python-2.7.12`` | ``intel/2016b`` ``20150225`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pydot.md b/docs/version-specific/supported-software/p/pydot.md index 1a18d1d52..880b8063c 100644 --- a/docs/version-specific/supported-software/p/pydot.md +++ b/docs/version-specific/supported-software/p/pydot.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pydot Python interface to Graphviz's Dot language. @@ -13,3 +17,6 @@ version | toolchain ``1.4.2`` | ``GCCcore/11.2.0`` ``1.4.2`` | ``GCCcore/11.3.0`` ``2.0.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyenchant.md b/docs/version-specific/supported-software/p/pyenchant.md index 345d19f0f..f85a4af39 100644 --- a/docs/version-specific/supported-software/p/pyenchant.md +++ b/docs/version-specific/supported-software/p/pyenchant.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyenchant PyEnchant is a spellchecking library for Python, based on the excellent Enchant library. @@ -7,3 +11,6 @@ PyEnchant is a spellchecking library for Python, based on the excellent Enchant version | versionsuffix | toolchain --------|---------------|---------- ``1.6.8`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyfaidx.md b/docs/version-specific/supported-software/p/pyfaidx.md index ad5a1af46..a78c77a25 100644 --- a/docs/version-specific/supported-software/p/pyfaidx.md +++ b/docs/version-specific/supported-software/p/pyfaidx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyfaidx pyfaidx: efficient pythonic random access to fasta subsequences @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``0.7.2.1`` | | ``GCCcore/12.2.0`` ``0.8.1.1`` | | ``GCCcore/12.3.0`` ``0.8.1.1`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyfasta.md b/docs/version-specific/supported-software/p/pyfasta.md index 8d82c22ee..12e8b66d7 100644 --- a/docs/version-specific/supported-software/p/pyfasta.md +++ b/docs/version-specific/supported-software/p/pyfasta.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyfasta fast, memory-efficient, pythonic (and command-line) access to fasta sequence files @@ -7,3 +11,6 @@ fast, memory-efficient, pythonic (and command-line) access to fasta sequence fil version | toolchain --------|---------- ``0.5.2`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyfits.md b/docs/version-specific/supported-software/p/pyfits.md index 7cf03aaea..ca0ad0756 100644 --- a/docs/version-specific/supported-software/p/pyfits.md +++ b/docs/version-specific/supported-software/p/pyfits.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyfits The PyFITS module is a Python library providing access to FITS (Flexible Image Transport System) @@ -7,3 +11,6 @@ The PyFITS module is a Python library providing access to FITS (Flexible Image T version | versionsuffix | toolchain --------|---------------|---------- ``3.5`` | ``-Python-2.7.15`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pygame.md b/docs/version-specific/supported-software/p/pygame.md index be2a52819..3c63763a0 100644 --- a/docs/version-specific/supported-software/p/pygame.md +++ b/docs/version-specific/supported-software/p/pygame.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pygame Pygame is a set of Python modules designed for writing video games. Pygame adds functionality on top of the excellent SDL library. This allows you to create fully featured games and multimedia programs in the python language. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.1.0`` | ``GCCcore/11.3.0`` ``2.5.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pygccxml.md b/docs/version-specific/supported-software/p/pygccxml.md index ad44563ef..e96311dd9 100644 --- a/docs/version-specific/supported-software/p/pygccxml.md +++ b/docs/version-specific/supported-software/p/pygccxml.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pygccxml Python package for easy C++ declarations navigation. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``20160706`` | ``-Python-2.7.11`` | ``foss/2016a`` ``20160706`` | ``-Python-3.5.1`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pygmo.md b/docs/version-specific/supported-software/p/pygmo.md index b87196cec..287f1d37e 100644 --- a/docs/version-specific/supported-software/p/pygmo.md +++ b/docs/version-specific/supported-software/p/pygmo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pygmo pygmo is a scientific Python library for massively parallel optimization. @@ -10,3 +14,6 @@ version | toolchain ``2.18.0`` | ``foss/2021a`` ``2.18.0`` | ``foss/2021b`` ``2.18.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pygraphviz.md b/docs/version-specific/supported-software/p/pygraphviz.md index 43ad7f0cb..af064ada5 100644 --- a/docs/version-specific/supported-software/p/pygraphviz.md +++ b/docs/version-specific/supported-software/p/pygraphviz.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pygraphviz PyGraphviz is a Python interface to the Graphviz graph layout and visualization package. With PyGraphviz you can create, edit, read, write, and draw graphs using Python to access the Graphviz graph data structure and layout algorithms. @@ -11,3 +15,6 @@ version | toolchain ``1.5`` | ``foss/2019b`` ``1.7`` | ``foss/2020b`` ``1.7`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pygrib.md b/docs/version-specific/supported-software/p/pygrib.md index 55d487c24..3319cc162 100644 --- a/docs/version-specific/supported-software/p/pygrib.md +++ b/docs/version-specific/supported-software/p/pygrib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pygrib Python interface for reading and writing GRIB data @@ -7,3 +11,6 @@ Python interface for reading and writing GRIB data version | toolchain --------|---------- ``2.0.4`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyhdf.md b/docs/version-specific/supported-software/p/pyhdf.md index df7a8669d..d616bdef7 100644 --- a/docs/version-specific/supported-software/p/pyhdf.md +++ b/docs/version-specific/supported-software/p/pyhdf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyhdf Python wrapper around the NCSA HDF version 4 library @@ -7,3 +11,6 @@ Python wrapper around the NCSA HDF version 4 library version | toolchain --------|---------- ``0.10.1`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyiron.md b/docs/version-specific/supported-software/p/pyiron.md index 8c912a11c..83694fc84 100644 --- a/docs/version-specific/supported-software/p/pyiron.md +++ b/docs/version-specific/supported-software/p/pyiron.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyiron An integrated development environment (IDE) for computational materials science. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.2.5`` | ``-Python-3.7.2`` | ``intel/2019a`` ``0.3.0`` | ``-Python-3.8.2`` | ``intel/2020a`` ``0.5.1`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pylift.md b/docs/version-specific/supported-software/p/pylift.md index 0e1e6a40c..289ffef4d 100644 --- a/docs/version-specific/supported-software/p/pylift.md +++ b/docs/version-specific/supported-software/p/pylift.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pylift pylift is an uplift library that provides, primarily: (1) Fast uplift modeling implementations and (2) Evaluation tools (UpliftEval class). @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.1.5`` | ``-Python-3.7.4`` | ``foss/2019b`` ``0.1.5`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pylipid.md b/docs/version-specific/supported-software/p/pylipid.md index 989fa944c..d5c61714b 100644 --- a/docs/version-specific/supported-software/p/pylipid.md +++ b/docs/version-specific/supported-software/p/pylipid.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pylipid PyLipID is a python package for analyzing lipid interactions with membrane proteins from Molecular Dynamics Simulations. @@ -7,3 +11,6 @@ PyLipID is a python package for analyzing lipid interactions with version | toolchain --------|---------- ``1.5.14`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pymatgen-db.md b/docs/version-specific/supported-software/p/pymatgen-db.md index d3361b65d..a4acecd2e 100644 --- a/docs/version-specific/supported-software/p/pymatgen-db.md +++ b/docs/version-specific/supported-software/p/pymatgen-db.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pymatgen-db Pymatgen-db is a database add-on for the Python Materials Genomics (pymatgen) materials analysis library. @@ -7,3 +11,6 @@ Pymatgen-db is a database add-on for the Python Materials Genomics (pymatgen) m version | versionsuffix | toolchain --------|---------------|---------- ``0.6.5`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pymatgen.md b/docs/version-specific/supported-software/p/pymatgen.md index 74ace4813..e68bec135 100644 --- a/docs/version-specific/supported-software/p/pymatgen.md +++ b/docs/version-specific/supported-software/p/pymatgen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pymatgen Python Materials Genomics is a robust materials analysis code that defines core object representations for structures and molecules with support for many electronic structure codes. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``4.1.1`` | ``-Python-2.7.12`` | ``intel/2016b`` ``4.3.2`` | ``-Python-2.7.12`` | ``intel/2016b`` ``4.7.3`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pymbar.md b/docs/version-specific/supported-software/p/pymbar.md index ee9a2062c..4389f778f 100644 --- a/docs/version-specific/supported-software/p/pymbar.md +++ b/docs/version-specific/supported-software/p/pymbar.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pymbar The pymbar package contains the pymbar suite of tools for the analysis of simulated and experimental data with the multistate Bennett acceptance ratio (MBAR) estimator. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.0.3`` | ``-Python-3.6.3`` | ``intel/2017b`` ``3.0.3`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pymca.md b/docs/version-specific/supported-software/p/pymca.md index d1a5679cc..511d38c43 100644 --- a/docs/version-specific/supported-software/p/pymca.md +++ b/docs/version-specific/supported-software/p/pymca.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pymca The PyMca X-Ray Fluorescence Toolkit, including PyMca5 and fisx. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``5.6.3`` | ``-Python-3.7.4`` | ``fosscuda/2019b`` ``5.6.3`` | | ``fosscuda/2020b`` ``5.7.6`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pymemcache.md b/docs/version-specific/supported-software/p/pymemcache.md index dbd73f41d..9b83a5147 100644 --- a/docs/version-specific/supported-software/p/pymemcache.md +++ b/docs/version-specific/supported-software/p/pymemcache.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pymemcache A comprehensive, fast, pure-Python memcached client. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.1.1`` | ``-Python-3.6.4`` | ``foss/2018a`` ``2.1.1`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyobjcryst.md b/docs/version-specific/supported-software/p/pyobjcryst.md index 1bf9a5587..f19e64d0b 100644 --- a/docs/version-specific/supported-software/p/pyobjcryst.md +++ b/docs/version-specific/supported-software/p/pyobjcryst.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyobjcryst Python bindings to ObjCryst++, the Object-Oriented Crystallographic Library. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.1.0.post2`` | ``-Python-3.8.2`` | ``intel/2020a`` ``2.2.1`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyodbc.md b/docs/version-specific/supported-software/p/pyodbc.md index 19ad8553d..0200be2b6 100644 --- a/docs/version-specific/supported-software/p/pyodbc.md +++ b/docs/version-specific/supported-software/p/pyodbc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyodbc pyodbc is an open source Python module that makes accessing ODBC databases simple. It implements the DB API 2.0 specification but is packed with even more Pythonic convenience. @@ -7,3 +11,6 @@ pyodbc is an open source Python module that makes accessing ODBC databases simp version | toolchain --------|---------- ``4.0.39`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyparsing.md b/docs/version-specific/supported-software/p/pyparsing.md index 8af2a6af6..a0da4f486 100644 --- a/docs/version-specific/supported-software/p/pyparsing.md +++ b/docs/version-specific/supported-software/p/pyparsing.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyparsing The pyparsing module is an alternative approach to creating and executing simple grammars, vs. the traditional lex/yacc approach, or the use of regular expressions. The pyparsing module provides a library of classes that client code uses to construct the grammar directly in Python code. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.4.6`` | ``-Python-2.7.16`` | ``GCCcore/8.3.0`` ``3.0.9`` | | ``GCCcore/11.3.0`` ``3.1.1`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyperf.md b/docs/version-specific/supported-software/p/pyperf.md index 9325c9b1a..d7d01fbbb 100644 --- a/docs/version-specific/supported-software/p/pyperf.md +++ b/docs/version-specific/supported-software/p/pyperf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyperf The Python pyperf module is a toolkit to write, run and analyze benchmarks @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.5.0`` | ``GCCcore/11.3.0`` ``2.6.0`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyplusplus.md b/docs/version-specific/supported-software/p/pyplusplus.md index 24947f74f..ed656fdc7 100644 --- a/docs/version-specific/supported-software/p/pyplusplus.md +++ b/docs/version-specific/supported-software/p/pyplusplus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyplusplus Py++ is a code generator for Boost.Python that simplifies writing Python bindings of a C/C++ library The tool is implemented as a Python module which is controlled by a user script. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``20160707`` | ``-Python-2.7.11`` | ``foss/2016a`` ``20160707`` | ``-Python-3.5.1`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pypmt.md b/docs/version-specific/supported-software/p/pypmt.md index e0d392fa1..c82583431 100644 --- a/docs/version-specific/supported-software/p/pypmt.md +++ b/docs/version-specific/supported-software/p/pypmt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pypmt PMT is a high-level software library capable of collecting power consumption measurements on various hardware. @@ -10,3 +14,6 @@ version | toolchain ``1.1.0`` | ``gfbf/2023a`` ``1.2.0`` | ``foss/2022a`` ``1.2.0`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyproj.md b/docs/version-specific/supported-software/p/pyproj.md index 056b67a07..75b051a44 100644 --- a/docs/version-specific/supported-software/p/pyproj.md +++ b/docs/version-specific/supported-software/p/pyproj.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyproj Python interface to PROJ4 library for cartographic transformations @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``3.4.0`` | | ``GCCcore/11.3.0`` ``3.5.0`` | | ``GCCcore/12.2.0`` ``3.6.0`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyqstem.md b/docs/version-specific/supported-software/p/pyqstem.md index 97f17ac85..897790d9c 100644 --- a/docs/version-specific/supported-software/p/pyqstem.md +++ b/docs/version-specific/supported-software/p/pyqstem.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyqstem QSTEM is a program for quantitative image simulation in electron microscopy, including TEM, STEM and CBED image simulation. This project interfaces the QSTEM code with Python and the Atomic Simulation Environment (ASE) to provide a single environment for building models, simulating and analysing images. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.0.3`` | ``-ASE-3.22.0`` | ``foss/2020b`` ``1.0.3`` | ``-ASE-3.22.0`` | ``fosscuda/2020b`` ``1.0.3`` | ``-Python-3.6.6`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyradiomics.md b/docs/version-specific/supported-software/p/pyradiomics.md index 6bf5d421d..d9b13f23f 100644 --- a/docs/version-specific/supported-software/p/pyradiomics.md +++ b/docs/version-specific/supported-software/p/pyradiomics.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyradiomics Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.0.1`` | ``-Python-3.7.4`` | ``foss/2019b`` ``3.0.1`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyringe.md b/docs/version-specific/supported-software/p/pyringe.md index 49dae2583..9220b4de9 100644 --- a/docs/version-specific/supported-software/p/pyringe.md +++ b/docs/version-specific/supported-software/p/pyringe.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyringe Debugger capable of attaching to and injecting code into python processes. @@ -7,3 +11,6 @@ Debugger capable of attaching to and injecting code into python processes. version | versionsuffix | toolchain --------|---------------|---------- ``1.0.2`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyro-api.md b/docs/version-specific/supported-software/p/pyro-api.md index efd776dff..6badc9450 100644 --- a/docs/version-specific/supported-software/p/pyro-api.md +++ b/docs/version-specific/supported-software/p/pyro-api.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyro-api Pyro is a flexible, scalable deep probabilistic programming library built on PyTorch. @@ -7,3 +11,6 @@ Pyro is a flexible, scalable deep probabilistic programming library built on PyT version | toolchain --------|---------- ``0.1.2`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyro-ppl.md b/docs/version-specific/supported-software/p/pyro-ppl.md index 76f3c2cca..c984fca36 100644 --- a/docs/version-specific/supported-software/p/pyro-ppl.md +++ b/docs/version-specific/supported-software/p/pyro-ppl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyro-ppl Pyro is a flexible, scalable deep probabilistic programming library built on PyTorch. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``1.8.4`` | | ``foss/2022a`` ``1.9.0`` | ``-CUDA-12.1.1`` | ``foss/2023a`` ``1.9.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pysamstats.md b/docs/version-specific/supported-software/p/pysamstats.md index 84bc66d82..fddd2c3dd 100644 --- a/docs/version-specific/supported-software/p/pysamstats.md +++ b/docs/version-specific/supported-software/p/pysamstats.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pysamstats A Python utility for calculating statistics against genome positions based on sequence alignments from a SAM or BAM file. @@ -7,3 +11,6 @@ A Python utility for calculating statistics against genome positions based on se version | toolchain --------|---------- ``1.1.2`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyseer.md b/docs/version-specific/supported-software/p/pyseer.md index 6430d46bf..0b8e0b094 100644 --- a/docs/version-specific/supported-software/p/pyseer.md +++ b/docs/version-specific/supported-software/p/pyseer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyseer pyseer was first written a python reimplementation of seer, which was written in C++. pyseer uses linear models with fixed or mixed effects to estimate the effect of genetic variation in a bacterial population on a phenotype of interest, while accounting for potentially very strong confounding population structure. This allows for genome-wide association studies (GWAS) to be performed in clonal organisms such as bacteria and viruses. @@ -7,3 +11,6 @@ pyseer was first written a python reimplementation of seer, which was written in version | toolchain --------|---------- ``1.3.11`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pysheds.md b/docs/version-specific/supported-software/p/pysheds.md index 2268dd7fe..52fa5a443 100644 --- a/docs/version-specific/supported-software/p/pysheds.md +++ b/docs/version-specific/supported-software/p/pysheds.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pysheds Simple and fast watershed delineation in python. @@ -7,3 +11,6 @@ Simple and fast watershed delineation in python. version | toolchain --------|---------- ``0.2.7.1`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyshp.md b/docs/version-specific/supported-software/p/pyshp.md index 7b19b0cf5..b262be488 100644 --- a/docs/version-specific/supported-software/p/pyshp.md +++ b/docs/version-specific/supported-software/p/pyshp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyshp Pure Python read/write support for ESRI Shapefile format @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.2.12`` | ``-Python-3.6.2`` | ``foss/2017b`` ``2.1.3`` | | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyslim.md b/docs/version-specific/supported-software/p/pyslim.md index 12bb1258f..5c0415ee8 100644 --- a/docs/version-specific/supported-software/p/pyslim.md +++ b/docs/version-specific/supported-software/p/pyslim.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyslim A Python API for reading and modifying tskit tree sequence files produced by SLiM, or modifying files produced by other programs (e.g., msprime, fwdpy11, and tsinfer) for use in SLiM. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.1`` | ``foss/2021b`` ``1.0.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pysndfx.md b/docs/version-specific/supported-software/p/pysndfx.md index 464f227d9..5acc86150 100644 --- a/docs/version-specific/supported-software/p/pysndfx.md +++ b/docs/version-specific/supported-software/p/pysndfx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pysndfx A lightweight Python wrapper for SoX - Sound eXchange. Supported effects range from EQ and compression to phasers, reverb and pitch shifters. @@ -7,3 +11,6 @@ A lightweight Python wrapper for SoX - Sound eXchange. Supported effects range version | versionsuffix | toolchain --------|---------------|---------- ``0.3.6`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pyspoa.md b/docs/version-specific/supported-software/p/pyspoa.md index 954a0f988..df06d39b6 100644 --- a/docs/version-specific/supported-software/p/pyspoa.md +++ b/docs/version-specific/supported-software/p/pyspoa.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pyspoa Python bindings to spoa. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``0.0.9`` | | ``GCC/11.3.0`` ``0.0.9`` | | ``GCC/12.2.0`` ``0.2.1`` | | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pysqlite.md b/docs/version-specific/supported-software/p/pysqlite.md index c68153a85..3fe21b1dc 100644 --- a/docs/version-specific/supported-software/p/pysqlite.md +++ b/docs/version-specific/supported-software/p/pysqlite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pysqlite pysqlite is an interface to the SQLite 3.x embedded relational database engine. It is almost fully compliant with the Python database API version 2.0 also exposes the unique features of SQLite. @@ -7,3 +11,6 @@ pysqlite is an interface to the SQLite 3.x embedded relational database engine. version | versionsuffix | toolchain --------|---------------|---------- ``2.8.2`` | ``-Python-2.7.11`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pysteps.md b/docs/version-specific/supported-software/p/pysteps.md index 170c6dde4..bc9bf2137 100644 --- a/docs/version-specific/supported-software/p/pysteps.md +++ b/docs/version-specific/supported-software/p/pysteps.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pysteps Pysteps is an open-source and community-driven Python library for probabilistic precipitation nowcasting, i.e. short-term ensemble prediction systems. @@ -7,3 +11,6 @@ Pysteps is an open-source and community-driven Python library for probabilistic version | toolchain --------|---------- ``1.7.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pystran.md b/docs/version-specific/supported-software/p/pystran.md index bfaa914c0..662956d17 100644 --- a/docs/version-specific/supported-software/p/pystran.md +++ b/docs/version-specific/supported-software/p/pystran.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pystran Toolset of dynamical model STRucture ANalysis algorithms @@ -7,3 +11,6 @@ Toolset of dynamical model STRucture ANalysis algorithms version | versionsuffix | toolchain --------|---------------|---------- ``2017.04.20`` | ``-Python-2.7.14`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pytesseract.md b/docs/version-specific/supported-software/p/pytesseract.md index 7eee1b310..9d8863735 100644 --- a/docs/version-specific/supported-software/p/pytesseract.md +++ b/docs/version-specific/supported-software/p/pytesseract.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pytesseract Python-tesseract is an optical character recognition (OCR) tool for python. That is, it will recognize and "read" the text embedded in images. Python-tesseract is a wrapper for Google's Tesseract-OCR Engine. It is also useful as a stand-alone invocation script to tesseract, as it can read all image types supported by the Pillow and Leptonica imaging libraries, including jpeg, png, gif, bmp, tiff, and others. Additionally, if used as a script, Python-tesseract will print the recognized text instead of writing it to a file. @@ -7,3 +11,6 @@ Python-tesseract is an optical character recognition (OCR) tool for python. That version | toolchain --------|---------- ``0.3.10`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pytest-benchmark.md b/docs/version-specific/supported-software/p/pytest-benchmark.md index 2e951389c..40ade228e 100644 --- a/docs/version-specific/supported-software/p/pytest-benchmark.md +++ b/docs/version-specific/supported-software/p/pytest-benchmark.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pytest-benchmark A pytest fixture for benchmarking code. @@ -7,3 +11,6 @@ A pytest fixture for benchmarking code. version | toolchain --------|---------- ``3.4.1`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pytest-cpp.md b/docs/version-specific/supported-software/p/pytest-cpp.md index a4b6d8327..d72063ffb 100644 --- a/docs/version-specific/supported-software/p/pytest-cpp.md +++ b/docs/version-specific/supported-software/p/pytest-cpp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pytest-cpp Use pytest runner to discover and execute C++ tests. @@ -7,3 +11,6 @@ Use pytest runner to discover and execute C++ tests. version | toolchain --------|---------- ``2.3.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pytest-flakefinder.md b/docs/version-specific/supported-software/p/pytest-flakefinder.md index 9df32d307..02302fc8c 100644 --- a/docs/version-specific/supported-software/p/pytest-flakefinder.md +++ b/docs/version-specific/supported-software/p/pytest-flakefinder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pytest-flakefinder Runs tests multiple times to expose flakiness. @@ -10,3 +14,6 @@ version | toolchain ``1.1.0`` | ``GCCcore/12.2.0`` ``1.1.0`` | ``GCCcore/12.3.0`` ``1.1.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pytest-rerunfailures.md b/docs/version-specific/supported-software/p/pytest-rerunfailures.md index 4a7cc2098..0a7f07962 100644 --- a/docs/version-specific/supported-software/p/pytest-rerunfailures.md +++ b/docs/version-specific/supported-software/p/pytest-rerunfailures.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pytest-rerunfailures pytest plugin to re-run tests to eliminate flaky failures. @@ -10,3 +14,6 @@ version | toolchain ``12.0`` | ``GCCcore/12.2.0`` ``12.0`` | ``GCCcore/12.3.0`` ``14.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pytest-shard.md b/docs/version-specific/supported-software/p/pytest-shard.md index 5fe9f31b3..c1ded852a 100644 --- a/docs/version-specific/supported-software/p/pytest-shard.md +++ b/docs/version-specific/supported-software/p/pytest-shard.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pytest-shard pytest plugin to support parallelism across multiple machines. Shards tests based on a hash of their test name enabling easy parallelism across machines, suitable for a wide variety of continuous integration services. Tests are split at the finest level of granularity, individual test cases, enabling parallelism even if all of your tests are in a single file (or even single parameterized test method). @@ -10,3 +14,6 @@ version | toolchain ``0.1.2`` | ``GCCcore/12.2.0`` ``0.1.2`` | ``GCCcore/12.3.0`` ``0.1.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pytest-workflow.md b/docs/version-specific/supported-software/p/pytest-workflow.md index 72d5b80e3..c86bb1b89 100644 --- a/docs/version-specific/supported-software/p/pytest-workflow.md +++ b/docs/version-specific/supported-software/p/pytest-workflow.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pytest-workflow Configure workflow/pipeline tests using yaml files. pytest-workflow is a workflow-system agnostic testing framework that aims to make pipeline/workflow testing easy by using YAML files for the test configuration. Whether you write your pipelines in WDL, snakemake, nextflow, bash or any other workflow framework, pytest-workflow makes testing easy. pytest-workflow is build on top of the pytest test framework. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.0.1`` | ``GCCcore/12.2.0`` ``2.1.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pytest-xdist.md b/docs/version-specific/supported-software/p/pytest-xdist.md index 21e8c94ef..6d2dd6527 100644 --- a/docs/version-specific/supported-software/p/pytest-xdist.md +++ b/docs/version-specific/supported-software/p/pytest-xdist.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pytest-xdist xdist: pytest distributed testing plugin The pytest-xdist plugin extends pytest with some unique test execution modes: * test run parallelization: if you have multiple CPUs or hosts you can use those for a combined test run. This allows to speed up development or to use special resources of remote machines. * --looponfail: run your tests repeatedly in a subprocess. After each run pytest waits until a file in your project changes and then re-runs the previously failing tests. This is repeated until all tests pass after which again a full run is performed. * Multi-Platform coverage: you can specify different Python interpreters or different platforms and run tests in parallel on all of them. Before running tests remotely, pytest efficiently “rsyncs” your program source code to the remote place. All test results are reported back and displayed to your local terminal. You may specify different Python versions and interpreters. @@ -12,3 +16,6 @@ version | toolchain ``2.5.0`` | ``GCCcore/11.2.0`` ``2.5.0`` | ``GCCcore/11.3.0`` ``3.3.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pytest.md b/docs/version-specific/supported-software/p/pytest.md index 8c0d27883..efd3ce552 100644 --- a/docs/version-specific/supported-software/p/pytest.md +++ b/docs/version-specific/supported-software/p/pytest.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pytest pytest: simple powerful testing with Python @@ -27,3 +31,6 @@ version | versionsuffix | toolchain ``7.1.3`` | | ``GCCcore/11.2.0`` ``7.2.2`` | | ``GCCcore/11.2.0`` ``7.4.2`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pythermalcomfort.md b/docs/version-specific/supported-software/p/pythermalcomfort.md index 965f87fff..76285f10e 100644 --- a/docs/version-specific/supported-software/p/pythermalcomfort.md +++ b/docs/version-specific/supported-software/p/pythermalcomfort.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pythermalcomfort Package to calculate several thermal comfort indices (e.g. PMV, PPD, SET, adaptive) and convert physical variables. @@ -7,3 +11,6 @@ Package to calculate several thermal comfort indices (e.g. PMV, PPD, SET, adapt version | toolchain --------|---------- ``2.8.10`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/python-Levenshtein.md b/docs/version-specific/supported-software/p/python-Levenshtein.md index 268c8779c..b7709dc7c 100644 --- a/docs/version-specific/supported-software/p/python-Levenshtein.md +++ b/docs/version-specific/supported-software/p/python-Levenshtein.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # python-Levenshtein Python extension for computing string edit distances and similarities. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.12.0`` | ``-Python-3.6.6`` | ``foss/2018b`` ``0.12.0`` | ``-Python-3.7.4`` | ``foss/2019b`` ``0.12.1`` | | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/python-casacore.md b/docs/version-specific/supported-software/p/python-casacore.md index be900c7b7..6a4a4829c 100644 --- a/docs/version-specific/supported-software/p/python-casacore.md +++ b/docs/version-specific/supported-software/p/python-casacore.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # python-casacore Python-casacore is a set of Python bindings for casacore, a c++ library used in radio astronomy. Python-casacore replaces the old pyrap. @@ -7,3 +11,6 @@ Python-casacore is a set of Python bindings for casacore, a c++ library used in version | toolchain --------|---------- ``3.5.2`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/python-docx.md b/docs/version-specific/supported-software/p/python-docx.md index 48d677a4c..48e0b3845 100644 --- a/docs/version-specific/supported-software/p/python-docx.md +++ b/docs/version-specific/supported-software/p/python-docx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # python-docx python-docx is a Python library for creating and updating Microsoft Word (.docx) files @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.8.11`` | ``GCCcore/10.2.0`` ``0.8.11`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/python-hl7.md b/docs/version-specific/supported-software/p/python-hl7.md index 6090cf931..176eb0db9 100644 --- a/docs/version-specific/supported-software/p/python-hl7.md +++ b/docs/version-specific/supported-software/p/python-hl7.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # python-hl7 A simple library for parsing messages of Health Level 7 (HL7) version 2.x into Python objects. @@ -7,3 +11,6 @@ A simple library for parsing messages of Health Level 7 (HL7) version 2.x into P version | versionsuffix | toolchain --------|---------------|---------- ``0.3.4`` | ``-Python-3.7.4`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/python-igraph.md b/docs/version-specific/supported-software/p/python-igraph.md index ed7271d28..1a86369bc 100644 --- a/docs/version-specific/supported-software/p/python-igraph.md +++ b/docs/version-specific/supported-software/p/python-igraph.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # python-igraph Python interface to the igraph high performance graph library, primarily aimed at complex network research and analysis. @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``0.9.0`` | | ``fosscuda/2020b`` ``0.9.6`` | | ``foss/2021a`` ``0.9.8`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/python-irodsclient.md b/docs/version-specific/supported-software/p/python-irodsclient.md index a18d0d2f7..fe97c8e56 100644 --- a/docs/version-specific/supported-software/p/python-irodsclient.md +++ b/docs/version-specific/supported-software/p/python-irodsclient.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # python-irodsclient A python API for iRODS @@ -9,3 +13,6 @@ version | toolchain ``1.1.4`` | ``GCCcore/10.3.0`` ``1.1.4`` | ``GCCcore/11.2.0`` ``2.0.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/python-isal.md b/docs/version-specific/supported-software/p/python-isal.md index c7dc98669..ceaf79dd7 100644 --- a/docs/version-specific/supported-software/p/python-isal.md +++ b/docs/version-specific/supported-software/p/python-isal.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # python-isal Faster zlib and gzip compatible compression and decompression by providing python bindings for the isa-l library. @@ -13,3 +17,6 @@ version | toolchain ``1.1.0`` | ``GCCcore/12.2.0`` ``1.1.0`` | ``GCCcore/12.3.0`` ``1.6.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/python-libsbml.md b/docs/version-specific/supported-software/p/python-libsbml.md index b90bdd733..b96e2fd37 100644 --- a/docs/version-specific/supported-software/p/python-libsbml.md +++ b/docs/version-specific/supported-software/p/python-libsbml.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # python-libsbml LibSBML Python API. @@ -9,3 +13,6 @@ version | toolchain ``5.19.7`` | ``foss/2021a`` ``5.20.2`` | ``foss/2021b`` ``5.20.2`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/python-louvain.md b/docs/version-specific/supported-software/p/python-louvain.md index f2686b144..9d17f92d0 100644 --- a/docs/version-specific/supported-software/p/python-louvain.md +++ b/docs/version-specific/supported-software/p/python-louvain.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # python-louvain Louvain algorithm for community detection @@ -9,3 +13,6 @@ version | toolchain ``0.15`` | ``foss/2021b`` ``0.16`` | ``foss/2022a`` ``0.16`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/python-mujoco.md b/docs/version-specific/supported-software/p/python-mujoco.md index 1a055b688..8f1b3a2d2 100644 --- a/docs/version-specific/supported-software/p/python-mujoco.md +++ b/docs/version-specific/supported-software/p/python-mujoco.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # python-mujoco This package is the canonical Python bindings for the MuJoCo physics engine. The mujoco package provides direct access to raw MuJoCo C API functions, structs, constants, and enumerations. Structs are provided as Python classes, with Pythonic initialization and deletion semantics. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.2.2`` | ``foss/2022a`` ``3.1.4`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/python-parasail.md b/docs/version-specific/supported-software/p/python-parasail.md index 499c35588..2367c7177 100644 --- a/docs/version-specific/supported-software/p/python-parasail.md +++ b/docs/version-specific/supported-software/p/python-parasail.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # python-parasail This package contains Python bindings for parasail. @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``1.3.3`` | | ``foss/2022a`` ``1.3.4`` | | ``foss/2022b`` ``1.3.4`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/python-telegram-bot.md b/docs/version-specific/supported-software/p/python-telegram-bot.md index ede0f1c83..fd31b88f4 100644 --- a/docs/version-specific/supported-software/p/python-telegram-bot.md +++ b/docs/version-specific/supported-software/p/python-telegram-bot.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # python-telegram-bot This library provides a pure Python, asynchronous interface for the Telegram Bot API. It's compatible with Python versions 3.7+. @@ -7,3 +11,6 @@ This library provides a pure Python, asynchronous interface for the Telegram Bot version | toolchain --------|---------- ``20.0a0`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/python-weka-wrapper3.md b/docs/version-specific/supported-software/p/python-weka-wrapper3.md index 49e528132..67e3e82ad 100644 --- a/docs/version-specific/supported-software/p/python-weka-wrapper3.md +++ b/docs/version-specific/supported-software/p/python-weka-wrapper3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # python-weka-wrapper3 Python3 wrapper for the Weka Machine Learning Workbench @@ -7,3 +11,6 @@ Python3 wrapper for the Weka Machine Learning Workbench version | versionsuffix | toolchain --------|---------------|---------- ``0.1.11`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/python-xxhash.md b/docs/version-specific/supported-software/p/python-xxhash.md index ab7d34089..5dfaa98dd 100644 --- a/docs/version-specific/supported-software/p/python-xxhash.md +++ b/docs/version-specific/supported-software/p/python-xxhash.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # python-xxhash Python bindings for xxHash. xxHash is an extremely fast non-cryptographic hash algorithm, working at RAM speed limit. @@ -11,3 +15,6 @@ version | toolchain ``3.2.0`` | ``GCCcore/12.2.0`` ``3.4.1`` | ``GCCcore/12.3.0`` ``3.4.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pythran.md b/docs/version-specific/supported-software/p/pythran.md index ca5cb92c8..a1a9fe9bb 100644 --- a/docs/version-specific/supported-software/p/pythran.md +++ b/docs/version-specific/supported-software/p/pythran.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pythran Pythran is an ahead of time compiler for a subset of the Python language, with a focus on scientific computing. It takes a Python module annotated with a few interface description and turns it into a native Python module with the same interface, but (hopefully) faster. @@ -7,3 +11,6 @@ Pythran is an ahead of time compiler for a subset of the Python language, with a version | versionsuffix | toolchain --------|---------------|---------- ``0.9.4.post1`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pytorch-3dunet.md b/docs/version-specific/supported-software/p/pytorch-3dunet.md index badea745e..ac4098f8d 100644 --- a/docs/version-specific/supported-software/p/pytorch-3dunet.md +++ b/docs/version-specific/supported-software/p/pytorch-3dunet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pytorch-3dunet PyTorch implementation of 3D U-Net and its variants: - UNet3D: Standard 3D U-Net based on 3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation - ResidualUNet3D: Residual 3D U-Net based on Superhuman Accuracy on the SNEMI3D Connectomics Challenge - ResidualUNetSE3D: Similar to ResidualUNet3D with the addition of Squeeze and Excitation blocks based on Deep Learning Semantic Segmentation for High- Resolution Medical Volumes. Original squeeze and excite paper: Squeeze-and- Excitation Networks The code allows for training the U-Net for both: semantic segmentation (binary and multi-class) and regression problems (e.g. de-noising, learning deconvolutions). @@ -7,3 +11,6 @@ PyTorch implementation of 3D U-Net and its variants: - UNet3D: Standard 3D U-Ne version | versionsuffix | toolchain --------|---------------|---------- ``1.6.0`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/p/pytorch-CycleGAN-pix2pix.md b/docs/version-specific/supported-software/p/pytorch-CycleGAN-pix2pix.md index f56636747..29404684b 100644 --- a/docs/version-specific/supported-software/p/pytorch-CycleGAN-pix2pix.md +++ b/docs/version-specific/supported-software/p/pytorch-CycleGAN-pix2pix.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # pytorch-CycleGAN-pix2pix PyTorch implementations for both unpaired and paired image-to-image translation. @@ -7,3 +11,6 @@ PyTorch implementations for both unpaired and paired image-to-image translation. version | versionsuffix | toolchain --------|---------------|---------- ``20230314`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/Q6.md b/docs/version-specific/supported-software/q/Q6.md index 52f0323aa..c09bcb86a 100644 --- a/docs/version-specific/supported-software/q/Q6.md +++ b/docs/version-specific/supported-software/q/Q6.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Q6 EVB, FEP and LIE simulator. @@ -7,3 +11,6 @@ EVB, FEP and LIE simulator. version | toolchain --------|---------- ``20180205`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QCA.md b/docs/version-specific/supported-software/q/QCA.md index 029f429af..b967e2121 100644 --- a/docs/version-specific/supported-software/q/QCA.md +++ b/docs/version-specific/supported-software/q/QCA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QCA Taking a hint from the similarly-named Java Cryptography Architecture, QCA aims to provide a straightforward and cross-platform crypto API, using Qt datatypes and conventions. QCA separates the API from the implementation, using plugins known as Providers. The advantage of this model is to allow applications to avoid linking to or explicitly depending on any particular cryptographic library. This allows one to easily change or upgrade crypto implementations without even needing to recompile the application! QCA should work everywhere Qt does, including Windows/Unix/MacOSX. @@ -12,3 +16,6 @@ version | toolchain ``2.1.3`` | ``foss/2016b`` ``2.1.3`` | ``intel/2016b`` ``2.3.5`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QCG-PilotJob.md b/docs/version-specific/supported-software/q/QCG-PilotJob.md index 7beb97943..d36ada947 100644 --- a/docs/version-specific/supported-software/q/QCG-PilotJob.md +++ b/docs/version-specific/supported-software/q/QCG-PilotJob.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QCG-PilotJob A python service for easy execution of many tasks inside a single allocation. @@ -10,3 +14,6 @@ version | toolchain ``0.13.1`` | ``foss/2022a`` ``0.13.1`` | ``gfbf/2022b`` ``0.13.1`` | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QCxMS.md b/docs/version-specific/supported-software/q/QCxMS.md index a37fc7d26..f7f1ecc11 100644 --- a/docs/version-specific/supported-software/q/QCxMS.md +++ b/docs/version-specific/supported-software/q/QCxMS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QCxMS QCxMS is a quantum chemical based program to calculate electron ionization (EI) and collision induced dissociation (CID) mass spectra using Born-Oppenheimer Molecular Dynamics (BO-MD). It is the successor of the QCEIMS program, in which the EI part is exchanged to x to account for the greater general applicibility of the program. @@ -7,3 +11,6 @@ QCxMS is a quantum chemical based program to calculate electron ionization (EI) version | toolchain --------|---------- ``5.0.3`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QD.md b/docs/version-specific/supported-software/q/QD.md index eec5b6425..0d09e035f 100644 --- a/docs/version-specific/supported-software/q/QD.md +++ b/docs/version-specific/supported-software/q/QD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QD QD-Engineering Python Library for CAE @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.8.9`` | | ``foss/2021a`` ``2.3.17`` | ``-20160110`` | ``NVHPC/21.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QDD.md b/docs/version-specific/supported-software/q/QDD.md index e194db594..de12e94e4 100644 --- a/docs/version-specific/supported-software/q/QDD.md +++ b/docs/version-specific/supported-software/q/QDD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QDD A user-friendly program to select microsatellite markers and design primers from large sequencing projects. @@ -7,3 +11,6 @@ A user-friendly program to select microsatellite markers and design primers fro version | versionsuffix | toolchain --------|---------------|---------- ``3.1.2`` | ``-Perl-5.28.0`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QEMU.md b/docs/version-specific/supported-software/q/QEMU.md index 729090c11..0952766ab 100644 --- a/docs/version-specific/supported-software/q/QEMU.md +++ b/docs/version-specific/supported-software/q/QEMU.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QEMU QEMU is a generic and open source machine emulator and virtualizer. @@ -7,3 +11,6 @@ QEMU is a generic and open source machine emulator and virtualizer. version | toolchain --------|---------- ``2.10.1`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QGIS.md b/docs/version-specific/supported-software/q/QGIS.md index a1e352c71..1487fc0bb 100644 --- a/docs/version-specific/supported-software/q/QGIS.md +++ b/docs/version-specific/supported-software/q/QGIS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QGIS QGIS is a user friendly Open Source Geographic Information System (GIS) @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.18.4`` | ``-Python-2.7.12`` | ``foss/2016b`` ``3.28.1`` | | ``foss/2021b`` ``3.4.12`` | ``-Python-3.7.2`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QIIME.md b/docs/version-specific/supported-software/q/QIIME.md index e7e689ce8..6e694323e 100644 --- a/docs/version-specific/supported-software/q/QIIME.md +++ b/docs/version-specific/supported-software/q/QIIME.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QIIME QIIME is an open-source bioinformatics pipeline for performing microbiome analysis from raw DNA sequencing data. @@ -7,3 +11,6 @@ QIIME is an open-source bioinformatics pipeline for performing microbiome analys version | toolchain --------|---------- ``1.9.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QIIME2.md b/docs/version-specific/supported-software/q/QIIME2.md index 92b65e2d9..1d9264d16 100644 --- a/docs/version-specific/supported-software/q/QIIME2.md +++ b/docs/version-specific/supported-software/q/QIIME2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QIIME2 QIIME is an open-source bioinformatics pipeline for performing microbiome analysis from raw DNA sequencing data. @@ -17,3 +21,6 @@ version | toolchain ``2022.8`` | ``system`` ``2023.5.1`` | ``foss/2022a`` ``2023.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QJson.md b/docs/version-specific/supported-software/q/QJson.md index bd40d25e6..806eee998 100644 --- a/docs/version-specific/supported-software/q/QJson.md +++ b/docs/version-specific/supported-software/q/QJson.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QJson QJson is a Qt-based library that maps JSON data to QVariant objects and vice versa. @@ -10,3 +14,6 @@ version | toolchain ``0.9.0`` | ``GCCcore/8.2.0`` ``0.9.0`` | ``foss/2016b`` ``0.9.0`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QML.md b/docs/version-specific/supported-software/q/QML.md index f3d022984..00b37e55a 100644 --- a/docs/version-specific/supported-software/q/QML.md +++ b/docs/version-specific/supported-software/q/QML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QML QML is a Python2/3-compatible toolkit for representation learning of properties of molecules and solids. @@ -7,3 +11,6 @@ QML is a Python2/3-compatible toolkit for representation learning of properties version | versionsuffix | toolchain --------|---------------|---------- ``0.2.10`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QScintilla.md b/docs/version-specific/supported-software/q/QScintilla.md index ad72b82f9..37436dd38 100644 --- a/docs/version-specific/supported-software/q/QScintilla.md +++ b/docs/version-specific/supported-software/q/QScintilla.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QScintilla QScintilla is a port to Qt of Neil Hodgson's Scintilla C++ editor control @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``2.11.6`` | | ``GCCcore/11.2.0`` ``2.9.4`` | ``-Python-2.7.12`` | ``foss/2016b`` ``2.9.4`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QTLtools.md b/docs/version-specific/supported-software/q/QTLtools.md index ad7417ba7..2fc2f4f59 100644 --- a/docs/version-specific/supported-software/q/QTLtools.md +++ b/docs/version-specific/supported-software/q/QTLtools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QTLtools QTLtools is a tool set for molecular QTL discovery and analysis. It allows to go from the raw sequence data to collection of molecular Quantitative Trait Loci (QTLs) in few easy-to-perform steps. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.1`` | ``intel/2016b`` ``1.3.1`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QUAST.md b/docs/version-specific/supported-software/q/QUAST.md index b62521661..197278a75 100644 --- a/docs/version-specific/supported-software/q/QUAST.md +++ b/docs/version-specific/supported-software/q/QUAST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QUAST QUAST evaluates genome assemblies by computing various metrics. It works both with and without reference genomes. The tool accepts multiple assemblies, thus is suitable for comparison. @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``5.0.2`` | | ``foss/2021a`` ``5.0.2`` | | ``foss/2021b`` ``5.2.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/Qhull.md b/docs/version-specific/supported-software/q/Qhull.md index de79a370a..19e7acf2e 100644 --- a/docs/version-specific/supported-software/q/Qhull.md +++ b/docs/version-specific/supported-software/q/Qhull.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Qhull Qhull computes the convex hull, Delaunay triangulation, Voronoi diagram, halfspace intersection about a point, furthest-site Delaunay triangulation, and furthest-site Voronoi diagram. The source code runs in 2-d, 3-d, 4-d, and higher dimensions. Qhull implements the Quickhull algorithm for computing the convex hull. @@ -25,3 +29,6 @@ version | toolchain ``2020.2`` | ``GCCcore/12.2.0`` ``2020.2`` | ``GCCcore/12.3.0`` ``2020.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/Qiskit.md b/docs/version-specific/supported-software/q/Qiskit.md index 307bee345..ea6a7061e 100644 --- a/docs/version-specific/supported-software/q/Qiskit.md +++ b/docs/version-specific/supported-software/q/Qiskit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Qiskit Qiskit is an open-source framework for working with noisy quantum computers at the level of pulses, circuits, and algorithms. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.11.1`` | ``-Python-3.7.2`` | ``foss/2019a`` ``0.12.0`` | ``-Python-3.7.2`` | ``foss/2019a`` ``0.31.0`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/Qt.md b/docs/version-specific/supported-software/q/Qt.md index f16e1d635..4822c4d13 100644 --- a/docs/version-specific/supported-software/q/Qt.md +++ b/docs/version-specific/supported-software/q/Qt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Qt Qt is a comprehensive cross-platform C++ application framework. @@ -24,3 +28,6 @@ version | versionsuffix | toolchain ``4.8.7`` | | ``intel/2017a`` ``4.8.7`` | | ``intel/2017b`` ``4.8.7`` | | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/Qt5.md b/docs/version-specific/supported-software/q/Qt5.md index 728d06aad..33b123af7 100644 --- a/docs/version-specific/supported-software/q/Qt5.md +++ b/docs/version-specific/supported-software/q/Qt5.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Qt5 Qt is a comprehensive cross-platform C++ application framework. @@ -36,3 +40,6 @@ version | toolchain ``5.8.0`` | ``intel/2017b`` ``5.9.3`` | ``foss/2017b`` ``5.9.8`` | ``fosscuda/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/Qt5Webkit.md b/docs/version-specific/supported-software/q/Qt5Webkit.md index cd206a847..717bb5695 100644 --- a/docs/version-specific/supported-software/q/Qt5Webkit.md +++ b/docs/version-specific/supported-software/q/Qt5Webkit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Qt5Webkit Qt Port of WebKit. WebKit is an open source web browser engine. @@ -10,3 +14,6 @@ version | toolchain ``5.212.0-alpha4`` | ``GCCcore/10.2.0`` ``5.212.0-alpha4`` | ``GCCcore/11.2.0`` ``5.212.0-alpha4`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/Qt6.md b/docs/version-specific/supported-software/q/Qt6.md index 7202a5614..148faab62 100644 --- a/docs/version-specific/supported-software/q/Qt6.md +++ b/docs/version-specific/supported-software/q/Qt6.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Qt6 Qt is a comprehensive cross-platform C++ application framework. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``6.5.2`` | ``GCCcore/12.3.0`` ``6.6.3`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QtKeychain.md b/docs/version-specific/supported-software/q/QtKeychain.md index 95d6c9379..3eedf9489 100644 --- a/docs/version-specific/supported-software/q/QtKeychain.md +++ b/docs/version-specific/supported-software/q/QtKeychain.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QtKeychain Platform-independent Qt API for storing passwords securely. @@ -9,3 +13,6 @@ version | toolchain ``0.13.2`` | ``GCCcore/11.2.0`` ``0.9.1`` | ``GCCcore/8.2.0`` ``0.9.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QtPy.md b/docs/version-specific/supported-software/q/QtPy.md index 606e92ffd..895e3c190 100644 --- a/docs/version-specific/supported-software/q/QtPy.md +++ b/docs/version-specific/supported-software/q/QtPy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QtPy QtPy is a small abstraction layer that lets you write applications using a single API call to either PyQt or PySide. It provides support for PyQt5, PyQt4, PySide2 and PySide. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``2.2.1`` | | ``GCCcore/11.2.0`` ``2.3.0`` | | ``GCCcore/11.3.0`` ``2.4.1`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/Qtconsole.md b/docs/version-specific/supported-software/q/Qtconsole.md index 7862113df..5040faf83 100644 --- a/docs/version-specific/supported-software/q/Qtconsole.md +++ b/docs/version-specific/supported-software/q/Qtconsole.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Qtconsole A rich Qt-based console for working with Jupyter kernels, supporting rich media output, session export, and more. The Qtconsole is a very lightweight application that largely feels like a terminal, but provides a number of enhancements only possible in a GUI, such as inline figures, proper multiline editing with syntax highlighting, graphical calltips, and more. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``5.3.2`` | | ``GCCcore/11.2.0`` ``5.4.0`` | | ``GCCcore/11.3.0`` ``5.5.1`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QuPath.md b/docs/version-specific/supported-software/q/QuPath.md index 6668f305e..a70a33de7 100644 --- a/docs/version-specific/supported-software/q/QuPath.md +++ b/docs/version-specific/supported-software/q/QuPath.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QuPath QuPath is open source software for bioimage analysis. QuPath is often used for digital pathology applications because it offers a powerful set of tools for working with whole slide images - but it can be applied to lots of other kinds of image as well. @@ -7,3 +11,6 @@ QuPath is open source software for bioimage analysis. QuPath is often used for d version | versionsuffix | toolchain --------|---------------|---------- ``0.5.0`` | ``-Java-17`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QuTiP.md b/docs/version-specific/supported-software/q/QuTiP.md index 2e1754640..a98d2f74a 100644 --- a/docs/version-specific/supported-software/q/QuTiP.md +++ b/docs/version-specific/supported-software/q/QuTiP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QuTiP QuTiP is open-source software for simulating the dynamics of open quantum systems. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``4.1.0`` | ``-Python-2.7.12`` | ``intel/2016b`` ``4.3.1`` | ``-Python-3.6.6`` | ``foss/2018b`` ``4.3.1`` | ``-Python-3.6.6`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QuaZIP.md b/docs/version-specific/supported-software/q/QuaZIP.md index e16371c4b..52074cde7 100644 --- a/docs/version-specific/supported-software/q/QuaZIP.md +++ b/docs/version-specific/supported-software/q/QuaZIP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QuaZIP QuaZIP is the C++ wrapper for Gilles Vollant's ZIP/UNZIP package (AKA Minizip) using Trolltech's Qt library. @@ -7,3 +11,6 @@ QuaZIP is the C++ wrapper for Gilles Vollant's ZIP/UNZIP package (AKA Minizip) version | toolchain --------|---------- ``0.8.1`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/Qualimap.md b/docs/version-specific/supported-software/q/Qualimap.md index 1a021223a..a167b5f35 100644 --- a/docs/version-specific/supported-software/q/Qualimap.md +++ b/docs/version-specific/supported-software/q/Qualimap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Qualimap Qualimap 2 is a platform-independent application written in Java and R that provides both a Graphical User Inteface (GUI) and a command-line interface to facilitate the quality control of alignment sequencing data and its derivatives like feature counts. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.2.1`` | ``-R-3.6.0`` | ``foss/2019a`` ``2.2.1`` | ``-R-4.0.3`` | ``foss/2020b`` ``2.2.1`` | ``-R-4.1.2`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/Quandl.md b/docs/version-specific/supported-software/q/Quandl.md index e019c3699..5c88d0d02 100644 --- a/docs/version-specific/supported-software/q/Quandl.md +++ b/docs/version-specific/supported-software/q/Quandl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Quandl A Python library for Quandl’s RESTful API. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``3.4.8`` | | ``foss/2019a`` ``3.6.1`` | | ``foss/2020b`` ``3.6.1`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QuantumESPRESSO.md b/docs/version-specific/supported-software/q/QuantumESPRESSO.md index 6eeac3fac..6f1713002 100644 --- a/docs/version-specific/supported-software/q/QuantumESPRESSO.md +++ b/docs/version-specific/supported-software/q/QuantumESPRESSO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QuantumESPRESSO Quantum ESPRESSO is an integrated suite of computer codes for electronic-structure calculations and materials modeling at the nanoscale. It is based on density-functional theory, plane waves, and pseudopotentials (both norm-conserving and ultrasoft). @@ -41,3 +45,6 @@ version | versionsuffix | toolchain ``7.2`` | | ``intel/2022b`` ``7.3`` | | ``foss/2023a`` ``7.3`` | | ``intel/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QuickFF.md b/docs/version-specific/supported-software/q/QuickFF.md index 038155bf4..dcc276123 100644 --- a/docs/version-specific/supported-software/q/QuickFF.md +++ b/docs/version-specific/supported-software/q/QuickFF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QuickFF QuickFF is a Python package developed at the Center for Molecular Modeling (CMM) to quickly derive accurate force fields from ab initio calculations. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``2.2.4`` | ``-Python-3.8.2`` | ``intel/2020a`` ``2.2.7`` | | ``foss/2023a`` ``2.2.7`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QuickPIC.md b/docs/version-specific/supported-software/q/QuickPIC.md index a658b7fcc..3e486cc49 100644 --- a/docs/version-specific/supported-software/q/QuickPIC.md +++ b/docs/version-specific/supported-software/q/QuickPIC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QuickPIC QuickPIC is a 3D parallel (MPI & OpenMP Hybrid) Quasi-Static PIC code, which is developed based on the framework UPIC. QuickPIC can efficiently simulate plasma based accelerator problems. This is the UCLA Plasma Simulation Group's official open-source repository for QuickPIC. @@ -7,3 +11,6 @@ QuickPIC is a 3D parallel (MPI & OpenMP Hybrid) Quasi-Static PIC code, which is version | toolchain --------|---------- ``20210224`` | ``gompi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QuickTree.md b/docs/version-specific/supported-software/q/QuickTree.md index ee82c68f8..8a399f279 100644 --- a/docs/version-specific/supported-software/q/QuickTree.md +++ b/docs/version-specific/supported-software/q/QuickTree.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QuickTree QuickTree is an efficient implementation of the Neighbor-Joining algorithm (PMID: 3447015), capable of reconstructing phylogenies from huge alignments in time less than the age of the universe. @@ -7,3 +11,6 @@ QuickTree is an efficient implementation of the Neighbor-Joining algorithm (PMID version | toolchain --------|---------- ``2.5`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/Quip.md b/docs/version-specific/supported-software/q/Quip.md index 6eb6b023a..2968f12c9 100644 --- a/docs/version-specific/supported-software/q/Quip.md +++ b/docs/version-specific/supported-software/q/Quip.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Quip Quip compresses next-generation sequencing data with extreme prejudice. It supports input and output in the FASTQ and SAM/BAM formats, compressing large datasets to as little as 15% of their original size. @@ -7,3 +11,6 @@ Quip compresses next-generation sequencing data with extreme prejudice. It supp version | toolchain --------|---------- ``1.1.8`` | ``GCC/4.8.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/Quorum.md b/docs/version-specific/supported-software/q/Quorum.md index c93c934f8..4171c4f30 100644 --- a/docs/version-specific/supported-software/q/Quorum.md +++ b/docs/version-specific/supported-software/q/Quorum.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Quorum QuorUM is an error corrector for Illumina reads @@ -7,3 +11,6 @@ QuorUM is an error corrector for Illumina reads version | toolchain --------|---------- ``1.1.1`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/Qwt.md b/docs/version-specific/supported-software/q/Qwt.md index 94d4a23ca..42cde025f 100644 --- a/docs/version-specific/supported-software/q/Qwt.md +++ b/docs/version-specific/supported-software/q/Qwt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Qwt The Qwt library contains GUI Components and utility classes which are primarily useful for programs with a technical background. @@ -17,3 +21,6 @@ version | toolchain ``6.2.0`` | ``GCCcore/10.3.0`` ``6.2.0`` | ``GCCcore/11.2.0`` ``6.2.0`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/QwtPolar.md b/docs/version-specific/supported-software/q/QwtPolar.md index 0b12aff53..ced60fd34 100644 --- a/docs/version-specific/supported-software/q/QwtPolar.md +++ b/docs/version-specific/supported-software/q/QwtPolar.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # QwtPolar The QwtPolar library contains classes for displaying values on a polar coordinate system. @@ -10,3 +14,6 @@ version | toolchain ``1.1.1`` | ``GCCcore/8.2.0`` ``1.1.1`` | ``foss/2016b`` ``1.1.1`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/index.md b/docs/version-specific/supported-software/q/index.md index 93379a4e7..fe52dfaa7 100644 --- a/docs/version-specific/supported-software/q/index.md +++ b/docs/version-specific/supported-software/q/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (q) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - *q* - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [q2-krona](q2-krona.md) * [Q6](Q6.md) * [QCA](QCA.md) diff --git a/docs/version-specific/supported-software/q/q2-krona.md b/docs/version-specific/supported-software/q/q2-krona.md index 8180298d3..03f9df289 100644 --- a/docs/version-specific/supported-software/q/q2-krona.md +++ b/docs/version-specific/supported-software/q/q2-krona.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # q2-krona QIIME2 plugin for creating Krona plots @@ -7,3 +11,6 @@ QIIME2 plugin for creating Krona plots version | toolchain --------|---------- ``20220124`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/qcat.md b/docs/version-specific/supported-software/q/qcat.md index 66a0d4a2c..6b0df4e7d 100644 --- a/docs/version-specific/supported-software/q/qcat.md +++ b/docs/version-specific/supported-software/q/qcat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # qcat qcat is a Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.1.0`` | | ``foss/2022b`` ``1.1.0`` | ``-Python-3.7.4`` | ``intel/2019b`` ``1.1.0`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/qcint.md b/docs/version-specific/supported-software/q/qcint.md index 258c38139..ec89f21d7 100644 --- a/docs/version-specific/supported-software/q/qcint.md +++ b/docs/version-specific/supported-software/q/qcint.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # qcint libcint is an open source library for analytical Gaussian integrals. qcint is an optimized libcint branch for the x86-64 platform. @@ -7,3 +11,6 @@ libcint is an open source library for analytical Gaussian integrals. qcint is an version | toolchain --------|---------- ``3.0.18`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/qforce.md b/docs/version-specific/supported-software/q/qforce.md index 0e81fe1b8..90c3d0d4b 100644 --- a/docs/version-specific/supported-software/q/qforce.md +++ b/docs/version-specific/supported-software/q/qforce.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # qforce Quantum Mechanically augmented molecular force fields. Q-Force is a software package for deriving all-atom force fields from quantum mechanical calculations in an automated manner. @@ -7,3 +11,6 @@ Quantum Mechanically augmented molecular force fields. Q-Force is a software pac version | toolchain --------|---------- ``0.6.11`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/qmflows.md b/docs/version-specific/supported-software/q/qmflows.md index 29570787e..b61f9d2b6 100644 --- a/docs/version-specific/supported-software/q/qmflows.md +++ b/docs/version-specific/supported-software/q/qmflows.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # qmflows This library tackles the construction and efficient execution of computational chemistry workflows. This allows computational chemists to use the emerging massively parallel compute environments in an easy manner and focus on interpretation of scientific data rather than on tedious job submission procedures and manual data processing. @@ -7,3 +11,6 @@ This library tackles the construction and efficient execution of computational version | toolchain --------|---------- ``1.0.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/qnorm.md b/docs/version-specific/supported-software/q/qnorm.md index 558ee4603..ce458db6c 100644 --- a/docs/version-specific/supported-software/q/qnorm.md +++ b/docs/version-specific/supported-software/q/qnorm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # qnorm Fast-ish (and correct!) quantile normalization in Python @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.8.1`` | ``foss/2022a`` ``0.8.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/qpth.md b/docs/version-specific/supported-software/q/qpth.md index ecbe756e6..489b4ccc0 100644 --- a/docs/version-specific/supported-software/q/qpth.md +++ b/docs/version-specific/supported-software/q/qpth.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # qpth A fast and differentiable QP solver for PyTorch. @@ -7,3 +11,6 @@ A fast and differentiable QP solver for PyTorch. version | versionsuffix | toolchain --------|---------------|---------- ``0.0.13-20190626`` | ``-Python-3.7.2`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/qrupdate.md b/docs/version-specific/supported-software/q/qrupdate.md index 7df560196..ed6d41519 100644 --- a/docs/version-specific/supported-software/q/qrupdate.md +++ b/docs/version-specific/supported-software/q/qrupdate.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # qrupdate qrupdate is a Fortran library for fast updates of QR and Cholesky decompositions. @@ -19,3 +23,6 @@ version | toolchain ``1.1.2`` | ``intel/2016a`` ``1.1.2`` | ``intel/2016b`` ``1.1.2`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/q/qtop.md b/docs/version-specific/supported-software/q/qtop.md index 767e7e62b..960ba5527 100644 --- a/docs/version-specific/supported-software/q/qtop.md +++ b/docs/version-specific/supported-software/q/qtop.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # qtop qtop is a nifty command-line tool for monitoring queueing systems, esp. PBS/torque. It tries to fit as much information as possible in your screen's real estate, by stitching together the output of commands like pbsnodes -a, qstat & qstat -q. It is possible to write wrappers for other platforms -people have done so for SGE, OAR etc- or, even examine traces offline and present the sampled information. @@ -7,3 +11,6 @@ qtop is a nifty command-line tool for monitoring queueing systems, esp. PBS/torq version | versionsuffix | toolchain --------|---------------|---------- ``53`` | ``-1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/R-INLA.md b/docs/version-specific/supported-software/r/R-INLA.md index 685438850..e4aef9daf 100644 --- a/docs/version-specific/supported-software/r/R-INLA.md +++ b/docs/version-specific/supported-software/r/R-INLA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # R-INLA R-INLA is a package in R that do approximate Bayesian inference for Latent Gaussian Models. @@ -7,3 +11,6 @@ R-INLA is a package in R that do approximate Bayesian inference for Latent Gauss version | versionsuffix | toolchain --------|---------------|---------- ``21.05.02`` | ``-R-4.0.4`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/R-MXM.md b/docs/version-specific/supported-software/r/R-MXM.md index 43c3c85b1..259dcc9c8 100644 --- a/docs/version-specific/supported-software/r/R-MXM.md +++ b/docs/version-specific/supported-software/r/R-MXM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # R-MXM MXM: Feature Selection (Including Multiple Solutions) and Bayesian Networks @@ -7,3 +11,6 @@ MXM: Feature Selection (Including Multiple Solutions) and Bayesian Networks version | toolchain --------|---------- ``1.5.5`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/R-bundle-Bioconductor.md b/docs/version-specific/supported-software/r/R-bundle-Bioconductor.md index 216678ca7..1791e4d83 100644 --- a/docs/version-specific/supported-software/r/R-bundle-Bioconductor.md +++ b/docs/version-specific/supported-software/r/R-bundle-Bioconductor.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # R-bundle-Bioconductor Bioconductor provides tools for the analysis and coprehension of high-throughput genomic data. @@ -26,3 +30,6 @@ version | versionsuffix | toolchain ``3.7`` | ``-R-3.5.0`` | ``iomkl/2018a`` ``3.8`` | ``-R-3.5.1`` | ``foss/2018b`` ``3.9`` | ``-R-3.6.0`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/R-bundle-CRAN.md b/docs/version-specific/supported-software/r/R-bundle-CRAN.md index ceb4afaee..9d90e1382 100644 --- a/docs/version-specific/supported-software/r/R-bundle-CRAN.md +++ b/docs/version-specific/supported-software/r/R-bundle-CRAN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # R-bundle-CRAN Bundle of R packages from CRAN @@ -7,3 +11,6 @@ Bundle of R packages from CRAN version | toolchain --------|---------- ``2023.12`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/R-keras.md b/docs/version-specific/supported-software/r/R-keras.md index fd8cd73b0..934a75b2d 100644 --- a/docs/version-specific/supported-software/r/R-keras.md +++ b/docs/version-specific/supported-software/r/R-keras.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # R-keras Interface to 'Keras' , a high-level neural networks 'API'. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``2.2.5.0`` | ``-Python-3.7.4-R-3.6.2`` | ``fosscuda/2019b`` ``2.4.0`` | ``-R-4.0.4`` | ``foss/2020b`` ``2.4.0`` | ``-R-4.0.4`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/R-opencv.md b/docs/version-specific/supported-software/r/R-opencv.md index 88223919d..18837c450 100644 --- a/docs/version-specific/supported-software/r/R-opencv.md +++ b/docs/version-specific/supported-software/r/R-opencv.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # R-opencv Experimenting with computer vision and machine learning in R. This package exposes some of the available OpenCV algorithms, such as edge, body or face detection. These can either be applied to analyze static images, or to filter live video footage from a camera device. @@ -7,3 +11,6 @@ Experimenting with computer vision and machine learning in R. This package expos version | versionsuffix | toolchain --------|---------------|---------- ``0.2.0`` | ``-R-4.0.0`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/R-tesseract.md b/docs/version-specific/supported-software/r/R-tesseract.md index 899f06b33..e42cf8450 100644 --- a/docs/version-specific/supported-software/r/R-tesseract.md +++ b/docs/version-specific/supported-software/r/R-tesseract.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # R-tesseract The R extension for using tesseract @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``4.0`` | ``-R-3.5.1`` | ``foss/2018b`` ``5.1.0`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/R-transport.md b/docs/version-specific/supported-software/r/R-transport.md index 9cf34fb3e..02883f66a 100644 --- a/docs/version-specific/supported-software/r/R-transport.md +++ b/docs/version-specific/supported-software/r/R-transport.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # R-transport transport: Computation of Optimal Transport Plans and Wasserstein Distances @@ -7,3 +11,6 @@ transport: Computation of Optimal Transport Plans and Wasserstein Distances version | toolchain --------|---------- ``0.13-0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/R.md b/docs/version-specific/supported-software/r/R.md index b9cb1a4ff..4e01675f0 100644 --- a/docs/version-specific/supported-software/r/R.md +++ b/docs/version-specific/supported-software/r/R.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # R R is a free software environment for statistical computing and graphics. @@ -53,3 +57,6 @@ version | versionsuffix | toolchain ``4.2.2`` | | ``foss/2022b`` ``4.3.2`` | | ``gfbf/2023a`` ``4.3.3`` | | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/R2jags.md b/docs/version-specific/supported-software/r/R2jags.md index 09f294503..1070f01b9 100644 --- a/docs/version-specific/supported-software/r/R2jags.md +++ b/docs/version-specific/supported-software/r/R2jags.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # R2jags Providing wrapper functions to implement Bayesian analysis in JAGS. @@ -7,3 +11,6 @@ Providing wrapper functions to implement Bayesian analysis in JAGS. version | versionsuffix | toolchain --------|---------------|---------- ``0.7-1`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RAPSearch2.md b/docs/version-specific/supported-software/r/RAPSearch2.md index 8c62c61f9..42f96160b 100644 --- a/docs/version-specific/supported-software/r/RAPSearch2.md +++ b/docs/version-specific/supported-software/r/RAPSearch2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RAPSearch2 RAPSearch stands for Reduced Alphabet based Protein similarity Search @@ -7,3 +11,6 @@ RAPSearch stands for Reduced Alphabet based Protein similarity Search version | toolchain --------|---------- ``2.24`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RASPA2.md b/docs/version-specific/supported-software/r/RASPA2.md index 0cee2e6c4..7b5ae1ac8 100644 --- a/docs/version-specific/supported-software/r/RASPA2.md +++ b/docs/version-specific/supported-software/r/RASPA2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RASPA2 A general purpose classical simulation package that can be used for the simulation of molecules in gases, fluids, zeolites, aluminosilicates, metal-organic frameworks, carbon nanotubes and external fields. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.0.3`` | ``-Python-2.7.12`` | ``intel/2016b`` ``2.0.41`` | | ``foss/2020b`` ``2.0.47`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RAxML-NG.md b/docs/version-specific/supported-software/r/RAxML-NG.md index 4a995faf0..3dbc36228 100644 --- a/docs/version-specific/supported-software/r/RAxML-NG.md +++ b/docs/version-specific/supported-software/r/RAxML-NG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RAxML-NG RAxML-NG is a phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion. Its search heuristic is based on iteratively performing a series of Subtree Pruning and Regrafting (SPR) moves, which allows to quickly navigate to the best-known ML tree. @@ -14,3 +18,6 @@ version | toolchain ``1.1.0`` | ``GCC/11.2.0`` ``1.2.0`` | ``GCC/12.2.0`` ``1.2.0`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RAxML.md b/docs/version-specific/supported-software/r/RAxML.md index fb10092d4..886710f2c 100644 --- a/docs/version-specific/supported-software/r/RAxML.md +++ b/docs/version-specific/supported-software/r/RAxML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RAxML RAxML search algorithm for maximum likelihood based inference of phylogenetic trees. @@ -25,3 +29,6 @@ version | versionsuffix | toolchain ``8.2.12`` | ``-hybrid-avx2`` | ``intel/2019a`` ``8.2.4`` | ``-hybrid-avx2`` | ``foss/2016a`` ``8.2.9`` | ``-hybrid-avx2`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RBFOpt.md b/docs/version-specific/supported-software/r/RBFOpt.md index 8e8a6beef..6e7abd1c8 100644 --- a/docs/version-specific/supported-software/r/RBFOpt.md +++ b/docs/version-specific/supported-software/r/RBFOpt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RBFOpt RBFOpt is a Python library for black-box optimization (also known as derivative-free optimization). @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``4.1.1`` | ``-Python-3.6.6`` | ``intel/2018b`` ``4.1.1`` | | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RCall.md b/docs/version-specific/supported-software/r/RCall.md index 61b82718c..7af9de68e 100644 --- a/docs/version-specific/supported-software/r/RCall.md +++ b/docs/version-specific/supported-software/r/RCall.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RCall This package facilitates communication between R and Julia and allows the user to call R packages from within Julia, providing the best of both worlds. @@ -7,3 +11,6 @@ This package facilitates communication between R and Julia and allows the version | versionsuffix | toolchain --------|---------------|---------- ``0.13.17`` | ``-R-4.2.1-Julia-1.9.2`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RDFlib.md b/docs/version-specific/supported-software/r/RDFlib.md index b719e62ed..a37c64899 100644 --- a/docs/version-specific/supported-software/r/RDFlib.md +++ b/docs/version-specific/supported-software/r/RDFlib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RDFlib RDFLib is a Python library for working with RDF, a simple yet powerful language for representing information. @@ -12,3 +16,6 @@ version | toolchain ``6.2.0`` | ``GCCcore/10.3.0`` ``6.2.0`` | ``GCCcore/11.3.0`` ``7.0.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RDKit.md b/docs/version-specific/supported-software/r/RDKit.md index e6ca3220c..0c28ae677 100644 --- a/docs/version-specific/supported-software/r/RDKit.md +++ b/docs/version-specific/supported-software/r/RDKit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RDKit RDKit is a collection of cheminformatics and machine-learning software written in C++ and Python. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``2022.03.5`` | | ``foss/2021b`` ``2022.09.4`` | | ``foss/2022a`` ``2023.03.3`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RDP-Classifier.md b/docs/version-specific/supported-software/r/RDP-Classifier.md index 4ced5795d..9f069b748 100644 --- a/docs/version-specific/supported-software/r/RDP-Classifier.md +++ b/docs/version-specific/supported-software/r/RDP-Classifier.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RDP-Classifier The RDP Classifier is a naive Bayesian classifier that can rapidly and accurately provides taxonomic assignments from domain to genus, with confidence estimates for each assignment. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.13`` | ``-Java-11`` | ``system`` ``2.13`` | ``-Java-17`` | ``system`` ``2.7`` | ``-Java-1.7.0_60`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RE2.md b/docs/version-specific/supported-software/r/RE2.md index ec2ba32c6..5fa1b06c0 100644 --- a/docs/version-specific/supported-software/r/RE2.md +++ b/docs/version-specific/supported-software/r/RE2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RE2 RE2 is a fast, safe, thread-friendly alternative to backtracking regular expression engines like those used in PCRE, Perl, and Python. It is a C++ library. @@ -14,3 +18,6 @@ version | toolchain ``2023-03-01`` | ``GCCcore/12.2.0`` ``2023-08-01`` | ``GCCcore/12.3.0`` ``2024-03-01`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RECON.md b/docs/version-specific/supported-software/r/RECON.md index 223a0741f..99feddd35 100644 --- a/docs/version-specific/supported-software/r/RECON.md +++ b/docs/version-specific/supported-software/r/RECON.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RECON Patched version of RECON to be used with RepeatModeler. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.08`` | ``GCC/10.2.0`` ``1.08`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RELION.md b/docs/version-specific/supported-software/r/RELION.md index eee8be71b..bb2cb4784 100644 --- a/docs/version-specific/supported-software/r/RELION.md +++ b/docs/version-specific/supported-software/r/RELION.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RELION RELION (for REgularised LIkelihood OptimisatioN, pronounce rely-on) is a stand-alone computer program that employs an empirical Bayesian approach to refinement of (multiple) 3D reconstructions or 2D class averages in electron cryo-microscopy (cryo-EM). @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``3.0.4`` | | ``intel/2017b`` ``3.0_beta.2018.08.02`` | | ``fosscuda/2018a`` ``3.0_beta.2018.08.02`` | | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/REMORA.md b/docs/version-specific/supported-software/r/REMORA.md index 5a8b049e6..63491019a 100644 --- a/docs/version-specific/supported-software/r/REMORA.md +++ b/docs/version-specific/supported-software/r/REMORA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # REMORA REsource MOnitoring for Remote Applications @@ -11,3 +15,6 @@ version | toolchain ``1.8.2`` | ``intel/2017a`` ``1.8.2`` | ``intel/2018a`` ``1.8.3`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RERconverge.md b/docs/version-specific/supported-software/r/RERconverge.md index fb9936947..ae35d2ffa 100644 --- a/docs/version-specific/supported-software/r/RERconverge.md +++ b/docs/version-specific/supported-software/r/RERconverge.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RERconverge RERconverge is a set of software written in R that estimates the correlation between relative evolutionary rates of genes and the evolution of a convergent binary or continuous trait across a phylogeny. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.1.0`` | ``-R-3.4.3`` | ``foss/2017b`` ``0.1.0`` | ``-R-3.4.3`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RFdiffusion.md b/docs/version-specific/supported-software/r/RFdiffusion.md index bf323da5e..1cab66dd4 100644 --- a/docs/version-specific/supported-software/r/RFdiffusion.md +++ b/docs/version-specific/supported-software/r/RFdiffusion.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RFdiffusion RFdiffusion is an open source method for structure generation, with or without conditional information (a motif, target etc). It can perform a whole range of protein design challenges as we have outlined in the RFdiffusion paper. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.1.0`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``1.1.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RHEIA.md b/docs/version-specific/supported-software/r/RHEIA.md index c7b8e34b5..1c3b38b47 100644 --- a/docs/version-specific/supported-software/r/RHEIA.md +++ b/docs/version-specific/supported-software/r/RHEIA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RHEIA Robust design optimization of renewable Hydrogen and dErIved energy cArrier systems @@ -7,3 +11,6 @@ Robust design optimization of renewable Hydrogen and dErIved energy cArrier syst version | toolchain --------|---------- ``1.1.6`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RInChI.md b/docs/version-specific/supported-software/r/RInChI.md index ef6a39cc6..314daaa1f 100644 --- a/docs/version-specific/supported-software/r/RInChI.md +++ b/docs/version-specific/supported-software/r/RInChI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RInChI The reaction IUPAC International Chemical Identifier (RInChI TM) is a non-proprietary identifier for chemical reactions that can be used in printed and electronic data sources thus enabling easier linking of diverse data compilations. @@ -7,3 +11,6 @@ The reaction IUPAC International Chemical Identifier (RInChI TM) is a non-propri version | versionsuffix | toolchain --------|---------------|---------- ``1.00`` | ``-x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RLCard.md b/docs/version-specific/supported-software/r/RLCard.md index 2ecbb2098..069bed98e 100644 --- a/docs/version-specific/supported-software/r/RLCard.md +++ b/docs/version-specific/supported-software/r/RLCard.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RLCard RLCard is a toolkit for Reinforcement Learning (RL) in card games. @@ -7,3 +11,6 @@ RLCard is a toolkit for Reinforcement Learning (RL) in card games. version | toolchain --------|---------- ``1.0.9`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RMBlast.md b/docs/version-specific/supported-software/r/RMBlast.md index 488c20d0c..bdd6dd97e 100644 --- a/docs/version-specific/supported-software/r/RMBlast.md +++ b/docs/version-specific/supported-software/r/RMBlast.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RMBlast RMBlast is a RepeatMasker compatible version of the standard NCBI BLAST suite. The primary difference between this distribution and the NCBI distribution is the addition of a new program 'rmblastn' for use with RepeatMasker and RepeatModeler. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``2.14.0`` | | ``gompi/2021a`` ``2.2.28`` | ``-Python-2.7.11`` | ``foss/2016a`` ``2.9.0`` | | ``gompi/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RNA-Bloom.md b/docs/version-specific/supported-software/r/RNA-Bloom.md index af573d4ee..7188ab7eb 100644 --- a/docs/version-specific/supported-software/r/RNA-Bloom.md +++ b/docs/version-specific/supported-software/r/RNA-Bloom.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RNA-Bloom RNA-Bloom is a fast and memory-efficient de novo transcript sequence assembler. @@ -9,3 +13,6 @@ version | toolchain ``1.2.3`` | ``GCC/8.3.0`` ``1.4.3`` | ``GCC/11.2.0`` ``2.0.1`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RNA-SeQC.md b/docs/version-specific/supported-software/r/RNA-SeQC.md index 96a8a3e5b..aaa4eead7 100644 --- a/docs/version-specific/supported-software/r/RNA-SeQC.md +++ b/docs/version-specific/supported-software/r/RNA-SeQC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RNA-SeQC RNA-SeQC is a java program which computes a series of quality control metrics for RNA-seq data. The input can be one or more BAM files. The output consists of HTML reports and tab delimited files of metrics data. This program can be valuable for comparing sequencing quality across different samples or experiments to evaluate different experimental parameters. It can also be run on individual samples as a means of quality control before continuing with downstream analysis. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``1.1.8`` | ``-Java-1.8`` | ``foss/2018b`` ``2.4.2`` | | ``foss/2021a`` ``2.4.2`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RNAIndel.md b/docs/version-specific/supported-software/r/RNAIndel.md index b3a6be37b..8fd0563b4 100644 --- a/docs/version-specific/supported-software/r/RNAIndel.md +++ b/docs/version-specific/supported-software/r/RNAIndel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RNAIndel RNAIndel calls coding indels and classifies them into somatic, germline, and artifact from tumor RNA-Seq data. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.3.0`` | ``-Python-3.6.6`` | ``intel/2018b`` ``1.0.0`` | ``-Python-3.6.6`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RNAclust.md b/docs/version-specific/supported-software/r/RNAclust.md index 88b6d5f20..ee1d98c78 100644 --- a/docs/version-specific/supported-software/r/RNAclust.md +++ b/docs/version-specific/supported-software/r/RNAclust.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RNAclust RNAclust is a perl script summarizing all the single steps required for clustering of structured RNA motifs, i.e. identifying groups of RNA sequences sharing a secondary structure motif. It requires as input a multiple FASTA file. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.3`` | ``-Perl-5.24.0`` | ``foss/2016b`` ``1.3`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RNAcode.md b/docs/version-specific/supported-software/r/RNAcode.md index 25a87d2eb..1fc86ed90 100644 --- a/docs/version-specific/supported-software/r/RNAcode.md +++ b/docs/version-specific/supported-software/r/RNAcode.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RNAcode RNAcode - Analyze the protein coding potential in multiple sequence alignments @@ -7,3 +11,6 @@ RNAcode - Analyze the protein coding potential in multiple sequence alignments version | toolchain --------|---------- ``0.3`` | ``foss/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RNAmmer.md b/docs/version-specific/supported-software/r/RNAmmer.md index 7ba9948f1..c201cad9f 100644 --- a/docs/version-specific/supported-software/r/RNAmmer.md +++ b/docs/version-specific/supported-software/r/RNAmmer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RNAmmer This is an example description. @@ -7,3 +11,6 @@ This is an example description. version | versionsuffix | toolchain --------|---------------|---------- ``1.2`` | ``-Perl-5.28.0`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RNAz.md b/docs/version-specific/supported-software/r/RNAz.md index df1170980..c2952cbb8 100644 --- a/docs/version-specific/supported-software/r/RNAz.md +++ b/docs/version-specific/supported-software/r/RNAz.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RNAz RNAz is a program for predicting structurally conserved and thermodynamically stable RNA secondary structures in multiple sequence alignments. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.1`` | ``foss/2016b`` ``2.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/ROCR-Runtime.md b/docs/version-specific/supported-software/r/ROCR-Runtime.md index 3a6d753df..886b4b0fe 100644 --- a/docs/version-specific/supported-software/r/ROCR-Runtime.md +++ b/docs/version-specific/supported-software/r/ROCR-Runtime.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ROCR-Runtime The user-mode API interfaces and libraries necessary for host applications to launch compute kernels to available HSA ROCm kernel agents @@ -7,3 +11,6 @@ The user-mode API interfaces and libraries necessary for host applications to la version | toolchain --------|---------- ``4.5.0`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/ROCT-Thunk-Interface.md b/docs/version-specific/supported-software/r/ROCT-Thunk-Interface.md index 9701a8aab..20b1769e1 100644 --- a/docs/version-specific/supported-software/r/ROCT-Thunk-Interface.md +++ b/docs/version-specific/supported-software/r/ROCT-Thunk-Interface.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ROCT-Thunk-Interface The user-mode API interfaces used to interact with the ROCk driver @@ -7,3 +11,6 @@ The user-mode API interfaces used to interact with the ROCk driver version | toolchain --------|---------- ``4.5.0`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/ROCm-CompilerSupport.md b/docs/version-specific/supported-software/r/ROCm-CompilerSupport.md index 403823dee..e607a185e 100644 --- a/docs/version-specific/supported-software/r/ROCm-CompilerSupport.md +++ b/docs/version-specific/supported-software/r/ROCm-CompilerSupport.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ROCm-CompilerSupport The compiler support repository provides various Lightning Compiler related services @@ -7,3 +11,6 @@ The compiler support repository provides various Lightning Compiler related serv version | toolchain --------|---------- ``4.5.0`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/ROCm.md b/docs/version-specific/supported-software/r/ROCm.md index abc9772b6..0b8a34b55 100644 --- a/docs/version-specific/supported-software/r/ROCm.md +++ b/docs/version-specific/supported-software/r/ROCm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ROCm AMD ROCm is the first open-source software development platform for HPC/Hyperscale-class GPU computing. AMD ROCm brings the UNIX philosophy of choice, minimalism and modular software development to GPU computing. @@ -7,3 +11,6 @@ AMD ROCm is the first open-source software development platform for HPC/Hypersca version | toolchain --------|---------- ``4.5.0`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/ROI_PAC.md b/docs/version-specific/supported-software/r/ROI_PAC.md index e93759214..7fc903c40 100644 --- a/docs/version-specific/supported-software/r/ROI_PAC.md +++ b/docs/version-specific/supported-software/r/ROI_PAC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ROI_PAC Repeat Orbit Interferometry PACkage (ROI_PAC), software for processing synthetic aperture radar data to produce differential interferograms @@ -7,3 +11,6 @@ Repeat Orbit Interferometry PACkage (ROI_PAC), software for processing synthetic version | versionsuffix | toolchain --------|---------------|---------- ``3.0.1`` | ``-Perl-5.24.1`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/ROME.md b/docs/version-specific/supported-software/r/ROME.md index c082b43fd..92f8ecf3e 100644 --- a/docs/version-specific/supported-software/r/ROME.md +++ b/docs/version-specific/supported-software/r/ROME.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ROME The ROME (Refinement and Optimization via Machine Learning for cryo-EM) Software package is one of the major research products at the Intel® PCCSB. @@ -7,3 +11,6 @@ The ROME (Refinement and Optimization via Machine Learning for cryo-EM) Softwar version | toolchain --------|---------- ``1.1.2`` | ``intel/2019.02`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/ROOT.md b/docs/version-specific/supported-software/r/ROOT.md index 6a9adc1a8..41b787e81 100644 --- a/docs/version-specific/supported-software/r/ROOT.md +++ b/docs/version-specific/supported-software/r/ROOT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ROOT The ROOT system provides a set of OO frameworks with all the functionality needed to handle and analyze large amounts of data in a very efficient way. @@ -23,3 +27,6 @@ version | versionsuffix | toolchain ``v5.34.36`` | ``-Python-2.7.11`` | ``intel/2016a`` ``v6.06.02`` | ``-Python-2.7.12`` | ``intel/2016b`` ``v6.08.02`` | ``-Python-2.7.11`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RPostgreSQL.md b/docs/version-specific/supported-software/r/RPostgreSQL.md index 0bf6e49d4..f3c46ff26 100644 --- a/docs/version-specific/supported-software/r/RPostgreSQL.md +++ b/docs/version-specific/supported-software/r/RPostgreSQL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RPostgreSQL Database interface and 'PostgreSQL' driver for 'R'. This package provides a Database Interface 'DBI' compliant driver for 'R' to access 'PostgreSQL' database systems. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.7-5`` | ``foss/2022a`` ``0.7-6`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RQGIS3.md b/docs/version-specific/supported-software/r/RQGIS3.md index 12fec6d5d..9d3a39545 100644 --- a/docs/version-specific/supported-software/r/RQGIS3.md +++ b/docs/version-specific/supported-software/r/RQGIS3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RQGIS3 RQGIS3 establishes an interface between R and QGIS3, i.e., it allows the user to access QGIS3 functionalities from within R. @@ -7,3 +11,6 @@ RQGIS3 establishes an interface between R and QGIS3, i.e., it allows the user t version | versionsuffix | toolchain --------|---------------|---------- ``20190903`` | ``-R-3.6.0`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RSEM.md b/docs/version-specific/supported-software/r/RSEM.md index acd1360ed..396e9e6a1 100644 --- a/docs/version-specific/supported-software/r/RSEM.md +++ b/docs/version-specific/supported-software/r/RSEM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RSEM RNA-Seq by Expectation-Maximization) @@ -18,3 +22,6 @@ version | toolchain ``1.3.3`` | ``foss/2019b`` ``1.3.3`` | ``foss/2021b`` ``1.3.3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RSeQC.md b/docs/version-specific/supported-software/r/RSeQC.md index 52ec4f33f..b0b693706 100644 --- a/docs/version-specific/supported-software/r/RSeQC.md +++ b/docs/version-specific/supported-software/r/RSeQC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RSeQC RSeQC provides a number of useful modules that can comprehensively evaluate high throughput sequence data especially RNA-seq data. Some basic modules quickly inspect sequence quality, nucleotide composition bias, PCR bias and GC bias, while RNA-seq specific modules evaluate sequencing saturation, mapped reads distribution, coverage uniformity, strand specificity, transcript level RNA integrity etc. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``4.0.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``4.0.0`` | | ``foss/2021a`` ``4.0.0`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RStan.md b/docs/version-specific/supported-software/r/RStan.md index c3df7c717..5f0e95448 100644 --- a/docs/version-specific/supported-software/r/RStan.md +++ b/docs/version-specific/supported-software/r/RStan.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RStan RStan is the R interface to Stan. Stan is a state-of-the-art platform for statistical modeling and high-performance statistical computation. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.18.2`` | ``-R-3.4.3`` | ``foss/2017b`` ``2.18.2`` | ``-R-3.5.1`` | ``foss/2018b`` ``2.18.2`` | ``-R-3.4.3`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RStudio-Server.md b/docs/version-specific/supported-software/r/RStudio-Server.md index f4f3d88fb..1cf2ddaed 100644 --- a/docs/version-specific/supported-software/r/RStudio-Server.md +++ b/docs/version-specific/supported-software/r/RStudio-Server.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RStudio-Server This is the RStudio Server version. RStudio is a set of integrated tools designed to help you be more productive with R. The server can be started with: rserver --server-daemonize=0 --www-port 8787 --rsession-which-r=$(which R) @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``1.4.1717`` | ``-Java-11-R-4.1.0`` | ``foss/2021a`` ``2022.07.2+576`` | ``-Java-11-R-4.2.1`` | ``foss/2022a`` ``2023.12.1+402`` | ``-Java-11-R-4.3.3`` | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RTG-Tools.md b/docs/version-specific/supported-software/r/RTG-Tools.md index f4c87da74..131e2f882 100644 --- a/docs/version-specific/supported-software/r/RTG-Tools.md +++ b/docs/version-specific/supported-software/r/RTG-Tools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RTG-Tools RTG Tools contains utilities to easily manipulate and accurately compare multiple VCF files, as well as utilities for processing other common NGS data formats. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.12.1`` | ``-Java-11`` | ``system`` ``3.9.1`` | ``-Java-1.8`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RaGOO.md b/docs/version-specific/supported-software/r/RaGOO.md index c417ab5d9..6ae2a7b2a 100644 --- a/docs/version-specific/supported-software/r/RaGOO.md +++ b/docs/version-specific/supported-software/r/RaGOO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RaGOO A tool to order and orient genome assembly contigs via Minimap2 alignments to a reference genome @@ -7,3 +11,6 @@ A tool to order and orient genome assembly contigs via Minimap2 alignments to a version | versionsuffix | toolchain --------|---------------|---------- ``1.11`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Racon.md b/docs/version-specific/supported-software/r/Racon.md index 561aa65ea..303d23a07 100644 --- a/docs/version-specific/supported-software/r/Racon.md +++ b/docs/version-specific/supported-software/r/Racon.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Racon Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads. @@ -18,3 +22,6 @@ version | toolchain ``1.5.0`` | ``GCCcore/11.3.0`` ``1.5.0`` | ``GCCcore/12.2.0`` ``1.5.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RagTag.md b/docs/version-specific/supported-software/r/RagTag.md index abec76212..4210edee0 100644 --- a/docs/version-specific/supported-software/r/RagTag.md +++ b/docs/version-specific/supported-software/r/RagTag.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RagTag RagTag is a collection of software tools for scaffolding and improving modern genome assemblies. Tasks include: homology-based misassembly correction, homology-based assembly scaffolding and patching, and scaffold merging. RagTag also provides command line utilities for working with common genome assembly file formats. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.0.1`` | ``foss/2020b`` ``2.1.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Ragout.md b/docs/version-specific/supported-software/r/Ragout.md index b39300203..7678c2416 100644 --- a/docs/version-specific/supported-software/r/Ragout.md +++ b/docs/version-specific/supported-software/r/Ragout.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Ragout Ragout (Reference-Assisted Genome Ordering UTility) is a tool for chromosome assembly using multiple references. Given a set of assembly fragments (contigs/scaffolds) and one or multiple related references (complete or draft), it produces a chromosome-scale assembly (as a set of scaffolds). @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.0`` | ``-Python-2.7.12`` | ``foss/2016b`` ``2.3`` | | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RapidJSON.md b/docs/version-specific/supported-software/r/RapidJSON.md index d45ff5db1..b765f28ba 100644 --- a/docs/version-specific/supported-software/r/RapidJSON.md +++ b/docs/version-specific/supported-software/r/RapidJSON.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RapidJSON A fast JSON parser/generator for C++ with both SAX/DOM style API @@ -16,3 +20,6 @@ version | toolchain ``1.1.0`` | ``GCCcore/8.2.0`` ``1.1.0`` | ``GCCcore/8.3.0`` ``1.1.0`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Raptor.md b/docs/version-specific/supported-software/r/Raptor.md index c190fb1c6..85ad59701 100644 --- a/docs/version-specific/supported-software/r/Raptor.md +++ b/docs/version-specific/supported-software/r/Raptor.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Raptor Set of parsers and serializers that generate Resource Description Framework (RDF) triples by parsing syntaxes or serialize the triples into a syntax. @@ -7,3 +11,6 @@ Set of parsers and serializers that generate Resource Description Framework (RDF version | toolchain --------|---------- ``2.0.16`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Rascaf.md b/docs/version-specific/supported-software/r/Rascaf.md index 73d3c0718..c2c925b88 100644 --- a/docs/version-specific/supported-software/r/Rascaf.md +++ b/docs/version-specific/supported-software/r/Rascaf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Rascaf Rascaf (RnA-seq SCAFfolder) uses continuity and order information from paired-end RNA-seq reads to improve a draft assembly, particularly in the gene regions. @@ -7,3 +11,6 @@ Rascaf (RnA-seq SCAFfolder) uses continuity and order information from paired-en version | toolchain --------|---------- ``1.0.2`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Ratatosk.md b/docs/version-specific/supported-software/r/Ratatosk.md index b81eb8cbf..d73dd5687 100644 --- a/docs/version-specific/supported-software/r/Ratatosk.md +++ b/docs/version-specific/supported-software/r/Ratatosk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Ratatosk Phased hybrid error correction of long reads using colored de Bruijn graphs @@ -7,3 +11,6 @@ Phased hybrid error correction of long reads using colored de Bruijn graphs version | toolchain --------|---------- ``0.4`` | ``GCC/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Raven.md b/docs/version-specific/supported-software/r/Raven.md index ee04efc26..67a237486 100644 --- a/docs/version-specific/supported-software/r/Raven.md +++ b/docs/version-specific/supported-software/r/Raven.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Raven Raven is a de novo genome assembler for long uncorrected reads. @@ -7,3 +11,6 @@ Raven is a de novo genome assembler for long uncorrected reads. version | toolchain --------|---------- ``1.8.1`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Ray-assembler.md b/docs/version-specific/supported-software/r/Ray-assembler.md index eeb767b16..e7e3e4520 100644 --- a/docs/version-specific/supported-software/r/Ray-assembler.md +++ b/docs/version-specific/supported-software/r/Ray-assembler.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Ray-assembler Parallel genome assemblies for parallel DNA sequencing @@ -7,3 +11,6 @@ Parallel genome assemblies for parallel DNA sequencing version | toolchain --------|---------- ``2.3.1`` | ``iimpi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Ray-project.md b/docs/version-specific/supported-software/r/Ray-project.md index 0e44a2518..2906a154d 100644 --- a/docs/version-specific/supported-software/r/Ray-project.md +++ b/docs/version-specific/supported-software/r/Ray-project.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Ray-project Ray is a fast and simple framework for building and running distributed applications. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``1.13.0`` | | ``foss/2021b`` ``1.9.2`` | | ``foss/2021b`` ``2.2.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Raysect.md b/docs/version-specific/supported-software/r/Raysect.md index 54a1c55d4..b402f5de4 100644 --- a/docs/version-specific/supported-software/r/Raysect.md +++ b/docs/version-specific/supported-software/r/Raysect.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Raysect Raysect is an OOP ray-tracing framework for Python @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.6.0`` | ``-Python-3.6.6`` | ``intel/2018b`` ``0.7.1`` | | ``foss/2020b`` ``0.7.1`` | | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Rcorrector.md b/docs/version-specific/supported-software/r/Rcorrector.md index 7a3edfd8c..1b5df6a77 100644 --- a/docs/version-specific/supported-software/r/Rcorrector.md +++ b/docs/version-specific/supported-software/r/Rcorrector.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Rcorrector Rcorrector(RNA-seq error CORRECTOR) is a kmer-based error correction method for RNA-seq data. @@ -7,3 +11,6 @@ Rcorrector(RNA-seq error CORRECTOR) is a kmer-based error correction method for version | toolchain --------|---------- ``1.0.2`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RcppGSL.md b/docs/version-specific/supported-software/r/RcppGSL.md index 944a12817..9990d39fc 100644 --- a/docs/version-specific/supported-software/r/RcppGSL.md +++ b/docs/version-specific/supported-software/r/RcppGSL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RcppGSL The 'RcppGSL' package provides an easy-to-use interface between 'GSL' data structures and R using concepts from 'Rcpp' which is itself a package that eases the interfaces between R and C++. @@ -7,3 +11,6 @@ The 'RcppGSL' package provides an easy-to-use interface between 'GSL' data stru version | versionsuffix | toolchain --------|---------------|---------- ``0.3.8`` | ``-R-4.0.4`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/ReFrame.md b/docs/version-specific/supported-software/r/ReFrame.md index 75f549c08..a7f992cf1 100644 --- a/docs/version-specific/supported-software/r/ReFrame.md +++ b/docs/version-specific/supported-software/r/ReFrame.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ReFrame ReFrame is a framework for writing regression tests for HPC systems. @@ -33,3 +37,6 @@ version | toolchain ``4.2.0`` | ``system`` ``4.3.2`` | ``system`` ``4.3.3`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/ReMatCh.md b/docs/version-specific/supported-software/r/ReMatCh.md index 3bdc3f715..bb25acdc7 100644 --- a/docs/version-specific/supported-software/r/ReMatCh.md +++ b/docs/version-specific/supported-software/r/ReMatCh.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ReMatCh Reads mapping against target sequences, checking mapping and consensus sequences production @@ -7,3 +11,6 @@ Reads mapping against target sequences, checking mapping and consensus sequences version | versionsuffix | toolchain --------|---------------|---------- ``3.2`` | ``-Python-2.7.12`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Reads2snp.md b/docs/version-specific/supported-software/r/Reads2snp.md index a3787850e..0ea614ba5 100644 --- a/docs/version-specific/supported-software/r/Reads2snp.md +++ b/docs/version-specific/supported-software/r/Reads2snp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Reads2snp reads2snp is a SNP and genotype caller: it predicts the genotype of distinct individuals at distinct positions of a set of sequences based on read mapping / read counts. Its typical input is a bam file. Its typical output is a vcf file. It is written in C++, based on the bio++ libraries, multi-threaded with openMP, available under Linux and MacOS @@ -7,3 +11,6 @@ reads2snp is a SNP and genotype caller: it predicts the genotype of distinct ind version | toolchain --------|---------- ``2.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Reapr.md b/docs/version-specific/supported-software/r/Reapr.md index b351227c5..624f7b66b 100644 --- a/docs/version-specific/supported-software/r/Reapr.md +++ b/docs/version-specific/supported-software/r/Reapr.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Reapr A tool that evaluates the accuracy of a genome assembly using mapped paired end reads, without the use of a reference genome for comparison. @@ -7,3 +11,6 @@ A tool that evaluates the accuracy of a genome assembly using mapped paired end version | toolchain --------|---------- ``1.0.18`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/ReaxFF.md b/docs/version-specific/supported-software/r/ReaxFF.md index 41b1e9e94..101d68373 100644 --- a/docs/version-specific/supported-software/r/ReaxFF.md +++ b/docs/version-specific/supported-software/r/ReaxFF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ReaxFF parameter generation code for the REAXFF Reactive force field program @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.0`` | ``-param`` | ``GCC/11.3.0`` ``2.0`` | ``-sim`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Red.md b/docs/version-specific/supported-software/r/Red.md index 93fd4ec80..ac251e7a8 100644 --- a/docs/version-specific/supported-software/r/Red.md +++ b/docs/version-specific/supported-software/r/Red.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Red Red (REpeat Detector) @@ -7,3 +11,6 @@ Red (REpeat Detector) version | toolchain --------|---------- ``2015-05-22`` | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Redis.md b/docs/version-specific/supported-software/r/Redis.md index 6d3775bf9..2754b0290 100644 --- a/docs/version-specific/supported-software/r/Redis.md +++ b/docs/version-specific/supported-software/r/Redis.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Redis Redis is an open source (BSD licensed), in-memory data structure store, used as a database, cache, and message broker. Redis provides data structures such as strings, hashes, lists, sets, sorted sets with range queries, bitmaps, hyperloglogs, geospatial indexes, and streams. Redis has built-in replication, Lua scripting, LRU eviction, transactions, and different levels of on-disk persistence, and provides high availability via Redis Sentinel and automatic partitioning with Redis Cluster. @@ -11,3 +15,6 @@ version | toolchain ``7.0.8`` | ``GCC/11.3.0`` ``7.2.3`` | ``GCCcore/12.3.0`` ``7.2.4`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Redundans.md b/docs/version-specific/supported-software/r/Redundans.md index 8b95f1bb5..b46d5e650 100644 --- a/docs/version-specific/supported-software/r/Redundans.md +++ b/docs/version-specific/supported-software/r/Redundans.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Redundans Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes. @@ -7,3 +11,6 @@ Redundans is a pipeline that assists an assembly of heterozygous/polymorphic gen version | toolchain --------|---------- ``0.13c`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RegTools.md b/docs/version-specific/supported-software/r/RegTools.md index 85376259a..465f30c8e 100644 --- a/docs/version-specific/supported-software/r/RegTools.md +++ b/docs/version-specific/supported-software/r/RegTools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RegTools RegTools is a set of tools that integrate DNA-seq and RNA-seq data to help interpret mutations in a regulatory and splicing context. @@ -10,3 +14,6 @@ version | toolchain ``0.5.2`` | ``foss/2020b`` ``0.5.2`` | ``foss/2021b`` ``1.0.0`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Relate.md b/docs/version-specific/supported-software/r/Relate.md index 78763e98f..b13dad2e6 100644 --- a/docs/version-specific/supported-software/r/Relate.md +++ b/docs/version-specific/supported-software/r/Relate.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Relate Software for estimating genome-wide genealogies for thousands of samples @@ -7,3 +11,6 @@ Software for estimating genome-wide genealogies for thousands of samples version | versionsuffix | toolchain --------|---------------|---------- ``20211123`` | ``-R-4.0.3`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RepastHPC.md b/docs/version-specific/supported-software/r/RepastHPC.md index 2a1a58d87..03f1f7c24 100644 --- a/docs/version-specific/supported-software/r/RepastHPC.md +++ b/docs/version-specific/supported-software/r/RepastHPC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RepastHPC The Repast Suite is a family of advanced, free, and open source agent-based modeling and simulation platforms that have collectively been under continuous development for over 15 years: Repast for High Performance Computing 2.2.0, released on 30 September 2016, is a lean and expert-focused C++-based modeling system that is designed for use on large computing clusters and supercomputers. @@ -7,3 +11,6 @@ The Repast Suite is a family of advanced, free, and open source agent-based mode version | toolchain --------|---------- ``2.2.0`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RepeatMasker.md b/docs/version-specific/supported-software/r/RepeatMasker.md index abc5d70d5..6d389f6e2 100644 --- a/docs/version-specific/supported-software/r/RepeatMasker.md +++ b/docs/version-specific/supported-software/r/RepeatMasker.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RepeatMasker RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``4.1.4`` | | ``foss/2022a`` ``4.1.5`` | | ``foss/2021a`` ``4.1.5`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RepeatModeler.md b/docs/version-specific/supported-software/r/RepeatModeler.md index a7200013c..eb75cbef8 100644 --- a/docs/version-specific/supported-software/r/RepeatModeler.md +++ b/docs/version-specific/supported-software/r/RepeatModeler.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RepeatModeler RepeatModeler is a de novo transposable element (TE) family identification and modeling package. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.0.2a`` | ``foss/2020b`` ``2.0.4`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RepeatScout.md b/docs/version-specific/supported-software/r/RepeatScout.md index 1b3aae1bd..b23a76930 100644 --- a/docs/version-specific/supported-software/r/RepeatScout.md +++ b/docs/version-specific/supported-software/r/RepeatScout.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RepeatScout De Novo Repeat Finder, Price A.L., Jones N.C. and Pevzner P.A. Developed and tested with our multiple sequence version of RepeatScout ( 1.0.6 ) @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.6`` | ``GCC/10.2.0`` ``1.0.6`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/ResistanceGA.md b/docs/version-specific/supported-software/r/ResistanceGA.md index ca86ce88b..488de4102 100644 --- a/docs/version-specific/supported-software/r/ResistanceGA.md +++ b/docs/version-specific/supported-software/r/ResistanceGA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ResistanceGA An R package to optimize resistance surfaces using Genetic Algorithms. @@ -7,3 +11,6 @@ An R package to optimize resistance surfaces using Genetic Algorithms. version | versionsuffix | toolchain --------|---------------|---------- ``4.2-5`` | ``-R-4.2.1-Julia-1.9.2`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Restrander.md b/docs/version-specific/supported-software/r/Restrander.md index 6d8cecb5d..026e51424 100644 --- a/docs/version-specific/supported-software/r/Restrander.md +++ b/docs/version-specific/supported-software/r/Restrander.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Restrander A fast, accurate program for orienting and quality-checking cDNA sequencing reads. @@ -7,3 +11,6 @@ A fast, accurate program for orienting and quality-checking cDNA sequencing read version | toolchain --------|---------- ``20230713`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RevBayes.md b/docs/version-specific/supported-software/r/RevBayes.md index eb2cba43f..2dae3e69e 100644 --- a/docs/version-specific/supported-software/r/RevBayes.md +++ b/docs/version-specific/supported-software/r/RevBayes.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RevBayes RevBayes provides an interactive environment for statistical computation in phylogenetics. It is primarily intended for modeling, simulation, and Bayesian inference in evolutionary biology, particularly phylogenetics. @@ -9,3 +13,6 @@ version | toolchain ``1.1.1`` | ``GCC/10.2.0`` ``1.1.1`` | ``GCC/11.2.0`` ``1.2.1`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Rgurobi.md b/docs/version-specific/supported-software/r/Rgurobi.md index 1c6e6a5a9..64d989c67 100644 --- a/docs/version-specific/supported-software/r/Rgurobi.md +++ b/docs/version-specific/supported-software/r/Rgurobi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Rgurobi Gurobi Optimizer 9.1 interface @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``9.1.2`` | ``-R-4.1.0`` | ``foss/2021a`` ``9.5.0`` | ``-R-4.1.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RheoTool.md b/docs/version-specific/supported-software/r/RheoTool.md index 250089ccf..7332cd0d1 100644 --- a/docs/version-specific/supported-software/r/RheoTool.md +++ b/docs/version-specific/supported-software/r/RheoTool.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RheoTool RheoTool is an open-source toolbox based on OpenFOAM to simulate Generalized Newtonian Fluids (GNF) and viscoelastic fluids under pressure-driven and/or electrically-driven flows. @@ -7,3 +11,6 @@ RheoTool is an open-source toolbox based on OpenFOAM to simulate Generalized New version | toolchain --------|---------- ``5.0`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Rhodium.md b/docs/version-specific/supported-software/r/Rhodium.md index d27bd5a0b..a6a3502ae 100644 --- a/docs/version-specific/supported-software/r/Rhodium.md +++ b/docs/version-specific/supported-software/r/Rhodium.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Rhodium Rhodium is an open source Python library for robust decision making (RDM) and multiobjective robust decision making (MORDM), and exploratory modelling (EM). @@ -7,3 +11,6 @@ Rhodium is an open source Python library for robust decision making (RDM) and m version | toolchain --------|---------- ``1.2.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Rivet.md b/docs/version-specific/supported-software/r/Rivet.md index 0499647d0..4ec82f12b 100644 --- a/docs/version-specific/supported-software/r/Rivet.md +++ b/docs/version-specific/supported-software/r/Rivet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Rivet Rivet toolkit (Robust Independent Validation of Experiment and Theory) To use your own analysis you must append the path to `RIVET_ANALYSIS_PATH`. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.1.7`` | ``-HepMC3-3.2.5`` | ``gompi/2022a`` ``3.1.9`` | ``-HepMC3-3.2.6`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Rmath.md b/docs/version-specific/supported-software/r/Rmath.md index 7b4e65193..4213e5287 100644 --- a/docs/version-specific/supported-software/r/Rmath.md +++ b/docs/version-specific/supported-software/r/Rmath.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Rmath Rmath is the standalone version of the R math library. Rmath can be used in your own C/C++ routines. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.3.1`` | ``intel/2016b`` ``4.0.4`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/RnBeads.md b/docs/version-specific/supported-software/r/RnBeads.md index f018c2b28..1b76d55ba 100644 --- a/docs/version-specific/supported-software/r/RnBeads.md +++ b/docs/version-specific/supported-software/r/RnBeads.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # RnBeads RnBeads is an R package for comprehensive analysis of DNA methylation data obtained with any experimental protocol that provides single-CpG resolution. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.14.0`` | ``-R-4.2.1`` | ``foss/2022a`` ``2.6.0`` | ``-R-4.0.0`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Roary.md b/docs/version-specific/supported-software/r/Roary.md index bb20b2342..8bcfe3dba 100644 --- a/docs/version-specific/supported-software/r/Roary.md +++ b/docs/version-specific/supported-software/r/Roary.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Roary Rapid large-scale prokaryote pan genome analysis @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``3.13.0`` | | ``foss/2020a`` ``3.13.0`` | | ``foss/2021a`` ``3.13.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Rosetta.md b/docs/version-specific/supported-software/r/Rosetta.md index 7128598f5..98ff540ad 100644 --- a/docs/version-specific/supported-software/r/Rosetta.md +++ b/docs/version-specific/supported-software/r/Rosetta.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Rosetta Rosetta is the premier software suite for modeling macromolecular structures. As a flexible, multi-purpose application, it includes tools for structure prediction, design, and remodeling of proteins and nucleic acids. @@ -9,3 +13,6 @@ version | toolchain ``2016.13.58602`` | ``foss/2016a`` ``2016.46.59086`` | ``foss/2016b`` ``3.7`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Rtree.md b/docs/version-specific/supported-software/r/Rtree.md index 14db82440..eba0ba978 100644 --- a/docs/version-specific/supported-software/r/Rtree.md +++ b/docs/version-specific/supported-software/r/Rtree.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Rtree Rtree is a ctypes Python wrapper of libspatialindex that provides a number of advanced spatial indexing features for the spatially curious Python user. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.8.3`` | ``-Python-2.7.14`` | ``intel/2018a`` ``1.0.1`` | | ``GCCcore/12.2.0`` ``1.2.0`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Ruby-Tk.md b/docs/version-specific/supported-software/r/Ruby-Tk.md index b4bd94344..7bb4f45f4 100644 --- a/docs/version-specific/supported-software/r/Ruby-Tk.md +++ b/docs/version-specific/supported-software/r/Ruby-Tk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Ruby-Tk Ruby Tk interface module using tcltklib @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.2.0`` | ``-Ruby-2.5.1`` | ``foss/2018a`` ``0.2.0`` | ``-Ruby-2.5.1`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Ruby.md b/docs/version-specific/supported-software/r/Ruby.md index 8744202ff..8a9ecb7f2 100644 --- a/docs/version-specific/supported-software/r/Ruby.md +++ b/docs/version-specific/supported-software/r/Ruby.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Ruby Ruby is a dynamic, open source programming language with a focus on simplicity and productivity. It has an elegant syntax that is natural to read and easy to write. @@ -28,3 +32,6 @@ version | toolchain ``3.0.5`` | ``GCCcore/11.3.0`` ``3.2.2`` | ``GCCcore/12.2.0`` ``3.3.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/Rust.md b/docs/version-specific/supported-software/r/Rust.md index 0a7e770a6..8bae1bec6 100644 --- a/docs/version-specific/supported-software/r/Rust.md +++ b/docs/version-specific/supported-software/r/Rust.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Rust Rust is a systems programming language that runs blazingly fast, prevents segfaults, and guarantees thread safety. @@ -34,3 +38,6 @@ version | toolchain ``1.76.0`` | ``GCCcore/13.2.0`` ``1.78.0`` | ``GCCcore/13.3.0`` ``1.8.0`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/index.md b/docs/version-specific/supported-software/r/index.md index 267ce203c..90d90f8eb 100644 --- a/docs/version-specific/supported-software/r/index.md +++ b/docs/version-specific/supported-software/r/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (r) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - *r* - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [R](R.md) * [R-bundle-Bioconductor](R-bundle-Bioconductor.md) * [R-bundle-CRAN](R-bundle-CRAN.md) diff --git a/docs/version-specific/supported-software/r/rCUDA.md b/docs/version-specific/supported-software/r/rCUDA.md index 880b9137b..c73555bdb 100644 --- a/docs/version-specific/supported-software/r/rCUDA.md +++ b/docs/version-specific/supported-software/r/rCUDA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rCUDA The rCUDA Framework enables the concurrent usage of CUDA-compatible devices remotely. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``4.0.1`` | ``_linux_64_Ubuntu10.04`` | ``system`` ``5.0`` | ``_linux_64_scientificLinux6`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rMATS-turbo.md b/docs/version-specific/supported-software/r/rMATS-turbo.md index 4b77cab41..81ae4979c 100644 --- a/docs/version-specific/supported-software/r/rMATS-turbo.md +++ b/docs/version-specific/supported-software/r/rMATS-turbo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rMATS-turbo rMATS turbo is the C/Cython version of rMATS (refer to http://rnaseq-mats.sourceforge.net). @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``4.1.1`` | ``foss/2020b`` ``4.2.0`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/radeontop.md b/docs/version-specific/supported-software/r/radeontop.md index bbcdac4eb..d54daf980 100644 --- a/docs/version-specific/supported-software/r/radeontop.md +++ b/docs/version-specific/supported-software/r/radeontop.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # radeontop View your GPU utilization, both for the total activity percent and individual blocks. @@ -7,3 +11,6 @@ View your GPU utilization, both for the total activity percent and individual bl version | toolchain --------|---------- ``1.3`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/radian.md b/docs/version-specific/supported-software/r/radian.md index b10c8bf5c..79f9b5f07 100644 --- a/docs/version-specific/supported-software/r/radian.md +++ b/docs/version-specific/supported-software/r/radian.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # radian radian is an alternative console for the R program with multiline editing and rich syntax highlight. @@ -7,3 +11,6 @@ radian is an alternative console for the R program with multiline editing and ri version | toolchain --------|---------- ``0.6.9`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rampart.md b/docs/version-specific/supported-software/r/rampart.md index e3165fd1e..66a0b6dff 100644 --- a/docs/version-specific/supported-software/r/rampart.md +++ b/docs/version-specific/supported-software/r/rampart.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rampart Read Assignment, Mapping, and Phylogenetic Analysis in Real Time. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.2.0`` | | ``foss/2020b`` ``1.2.0rc3`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/randfold.md b/docs/version-specific/supported-software/r/randfold.md index 8df2ec8bb..e7ff06805 100644 --- a/docs/version-specific/supported-software/r/randfold.md +++ b/docs/version-specific/supported-software/r/randfold.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # randfold Minimum free energy of folding randomization test software @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.0.1`` | ``foss/2018b`` ``2.0.1`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/randrproto.md b/docs/version-specific/supported-software/r/randrproto.md index 7179a6a93..552193bce 100644 --- a/docs/version-specific/supported-software/r/randrproto.md +++ b/docs/version-specific/supported-software/r/randrproto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # randrproto Xrandr protocol and ancillary headers @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.5.0`` | ``foss/2016a`` ``1.5.0`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rapidNJ.md b/docs/version-specific/supported-software/r/rapidNJ.md index ba404b79a..ae1bcd01b 100644 --- a/docs/version-specific/supported-software/r/rapidNJ.md +++ b/docs/version-specific/supported-software/r/rapidNJ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rapidNJ RapidNJ is an algorithmic engineered implementation of canonical neighbour-joining. It uses an efficient search heuristic to speed-up the core computations of the neighbour-joining method that enables RapidNJ to outperform other state-of-the-art neighbour-joining implementations. @@ -7,3 +11,6 @@ RapidNJ is an algorithmic engineered implementation of canonical neighbour-join version | toolchain --------|---------- ``2.3.3`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rapidcsv.md b/docs/version-specific/supported-software/r/rapidcsv.md index d963828e2..1bd13b5c4 100644 --- a/docs/version-specific/supported-software/r/rapidcsv.md +++ b/docs/version-specific/supported-software/r/rapidcsv.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rapidcsv Rapidcsv is a C++ header-only library for CSV parsing. While the name admittedly was inspired by the rapidjson project, the objectives are not the same. The goal of rapidcsv is to be an easy-to-use CSV library enabling rapid development. For optimal performance (be it CPU or memory usage) a CSV parser implemented for the specific use-case is likely to be more performant. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``8.62`` | ``GCCcore/11.2.0`` ``8.64`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rapidtide.md b/docs/version-specific/supported-software/r/rapidtide.md index 2f0e74100..b0c1fcb17 100644 --- a/docs/version-specific/supported-software/r/rapidtide.md +++ b/docs/version-specific/supported-software/r/rapidtide.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rapidtide Rapidtide is a suite of python programs used to perform time delay analysis on functional imaging data to find time lagged correlations between the voxelwise time series and other time series. @@ -7,3 +11,6 @@ Rapidtide is a suite of python programs used to perform time delay analysis on f version | versionsuffix | toolchain --------|---------------|---------- ``1.8.0`` | ``-Python-3.7.2`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rasterio.md b/docs/version-specific/supported-software/r/rasterio.md index f6e581abb..cca7e2aa6 100644 --- a/docs/version-specific/supported-software/r/rasterio.md +++ b/docs/version-specific/supported-software/r/rasterio.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rasterio Rasterio reads and writes geospatial raster data. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``1.3.4`` | | ``foss/2022a`` ``1.3.8`` | | ``foss/2022b`` ``1.3.9`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rasterstats.md b/docs/version-specific/supported-software/r/rasterstats.md index 6201bedbf..2ebed9d6b 100644 --- a/docs/version-specific/supported-software/r/rasterstats.md +++ b/docs/version-specific/supported-software/r/rasterstats.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rasterstats rasterstats is a Python module for summarizing geospatial raster datasets based on vector geometries. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.15.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``0.19.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rclone.md b/docs/version-specific/supported-software/r/rclone.md index edef57a45..4a7f6834a 100644 --- a/docs/version-specific/supported-software/r/rclone.md +++ b/docs/version-specific/supported-software/r/rclone.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rclone Rclone is a command line program to sync files and directories to and from a variety of online storage services @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``1.63.1`` | ``-amd64`` | ``system`` ``1.65.2`` | | ``system`` ``1.66.0`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/re2c.md b/docs/version-specific/supported-software/r/re2c.md index aaeeb7b66..92cc7026a 100644 --- a/docs/version-specific/supported-software/r/re2c.md +++ b/docs/version-specific/supported-software/r/re2c.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # re2c re2c is a free and open-source lexer generator for C and C++. Its main goal is generating fast lexers: at least as fast as their reasonably optimized hand-coded counterparts. Instead of using traditional table-driven approach, re2c encodes the generated finite state automata directly in the form of conditional jumps and comparisons. @@ -16,3 +20,6 @@ version | toolchain ``3.0`` | ``GCCcore/12.2.0`` ``3.1`` | ``GCCcore/12.3.0`` ``3.1`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/redis-py.md b/docs/version-specific/supported-software/r/redis-py.md index 0af6b9dab..af47ff7cd 100644 --- a/docs/version-specific/supported-software/r/redis-py.md +++ b/docs/version-specific/supported-software/r/redis-py.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # redis-py The Python interface to the Redis key-value store. @@ -10,3 +14,6 @@ version | toolchain ``4.3.3`` | ``foss/2021b`` ``4.5.1`` | ``foss/2022a`` ``5.0.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/regionmask.md b/docs/version-specific/supported-software/r/regionmask.md index 641184936..b4aa143ca 100644 --- a/docs/version-specific/supported-software/r/regionmask.md +++ b/docs/version-specific/supported-software/r/regionmask.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # regionmask regionmask creates masks of geographical regions. It determines to which geographic region each grid point belongs. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.9.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``0.9.0`` | | ``foss/2021b`` ``0.9.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/remake.md b/docs/version-specific/supported-software/r/remake.md index 785a8359e..122c033c2 100644 --- a/docs/version-specific/supported-software/r/remake.md +++ b/docs/version-specific/supported-software/r/remake.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # remake remake is an enhanced version of GNU Make that adds improved error reporting, better tracing, profiling and a debugger @@ -7,3 +11,6 @@ remake is an enhanced version of GNU Make that adds improved error reporting, be version | toolchain --------|---------- ``4.3+dbg-1.6`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/renderproto.md b/docs/version-specific/supported-software/r/renderproto.md index 0a64fa9d5..5291f6b93 100644 --- a/docs/version-specific/supported-software/r/renderproto.md +++ b/docs/version-specific/supported-software/r/renderproto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # renderproto Xrender protocol and ancillary headers @@ -10,3 +14,6 @@ version | toolchain ``0.11`` | ``gimkl/2.11.5`` ``0.11`` | ``intel/2016a`` ``0.11`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/request.md b/docs/version-specific/supported-software/r/request.md index 047f0a20e..d3a07140d 100644 --- a/docs/version-specific/supported-software/r/request.md +++ b/docs/version-specific/supported-software/r/request.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # request Request is designed to be the simplest way possible to make http calls. It supports HTTPS and follows redirects by default. @@ -7,3 +11,6 @@ Request is designed to be the simplest way possible to make http calls. It version | versionsuffix | toolchain --------|---------------|---------- ``2.88.1`` | ``-nodejs-12.19.0`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/requests.md b/docs/version-specific/supported-software/r/requests.md index 461749d3b..f276b998c 100644 --- a/docs/version-specific/supported-software/r/requests.md +++ b/docs/version-specific/supported-software/r/requests.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # requests Python http for humans @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``2.11.1`` | ``-Python-3.5.2`` | ``intel/2016b`` ``2.13.0`` | ``-Python-2.7.12`` | ``foss/2016b`` ``2.13.0`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/resolos.md b/docs/version-specific/supported-software/r/resolos.md index dfdb2354e..47af01acc 100644 --- a/docs/version-specific/supported-software/r/resolos.md +++ b/docs/version-specific/supported-software/r/resolos.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # resolos Resolos is a toolkit written in Python for maintaining reproducible environments for scientific computations. It's main goal is to enable researchers to easily replicate environments through space (running code on HPC environment) and time (environment preservation for long term archival). For installation and detailed usage, check out the documentation. @@ -7,3 +11,6 @@ Resolos is a toolkit written in Python for maintaining reproducible environments version | toolchain --------|---------- ``0.3.5`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rethinking.md b/docs/version-specific/supported-software/r/rethinking.md index 405ab8f59..6397c4189 100644 --- a/docs/version-specific/supported-software/r/rethinking.md +++ b/docs/version-specific/supported-software/r/rethinking.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rethinking R package that contains tools for conducting both quick quadratic approximation of the posterior distribution as well as Hamiltonian Monte Carlo. @@ -7,3 +11,6 @@ R package that contains tools for conducting both quick quadratic approximation version | versionsuffix | toolchain --------|---------------|---------- ``2.40-20230914`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/retworkx.md b/docs/version-specific/supported-software/r/retworkx.md index 3731350c3..781ec9b16 100644 --- a/docs/version-specific/supported-software/r/retworkx.md +++ b/docs/version-specific/supported-software/r/retworkx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # retworkx retworkx is a general purpose graph library for python3 written in Rust to take advantage of the performance and safety that Rust provides. It was built as a replacement for qiskit's previous (and current) networkx usage (hence the name) but is designed to provide a high performance general purpose graph library for any python application. The project was originally started to build a faster directed graph to use as the underlying data structure for the DAG at the center of qiskit-terra's transpiler, but it has since grown to cover all the graph usage in Qiskit and other applications. @@ -7,3 +11,6 @@ retworkx is a general purpose graph library for python3 written in Rust to take version | toolchain --------|---------- ``0.9.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rgdal.md b/docs/version-specific/supported-software/r/rgdal.md index 80d856564..c2da33dd5 100644 --- a/docs/version-specific/supported-software/r/rgdal.md +++ b/docs/version-specific/supported-software/r/rgdal.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rgdal Provides bindings to the 'Geospatial' Data Abstraction Library ('GDAL') (>= 1.11.4 and <= 2.5.0) and access to projection/transformation operations from the 'PROJ.4' library. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``1.5-23`` | ``-R-4.0.4`` | ``foss/2020b`` ``1.5-23`` | ``-R-4.1.0`` | ``foss/2021a`` ``1.6-6`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rgeos.md b/docs/version-specific/supported-software/r/rgeos.md index 44a86b7d4..06346d858 100644 --- a/docs/version-specific/supported-software/r/rgeos.md +++ b/docs/version-specific/supported-software/r/rgeos.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rgeos R interface to Geometry Engine - Open Source (GEOS) using the C API for topology operations on geometries @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.5-2`` | ``-R-3.6.2`` | ``foss/2019b`` ``0.5-5`` | ``-R-4.0.0`` | ``foss/2020a`` ``0.5-5`` | ``-R-4.1.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rhdf5.md b/docs/version-specific/supported-software/r/rhdf5.md index 9c40f299a..9d5a8651c 100644 --- a/docs/version-specific/supported-software/r/rhdf5.md +++ b/docs/version-specific/supported-software/r/rhdf5.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rhdf5 This R/Bioconductor package provides an interface between HDF5 and R. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.16.0`` | ``-R-3.2.3`` | ``intel/2016a`` ``2.18.0`` | ``-R-3.3.1`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rickflow.md b/docs/version-specific/supported-software/r/rickflow.md index c9c58e122..cf7485f40 100644 --- a/docs/version-specific/supported-software/r/rickflow.md +++ b/docs/version-specific/supported-software/r/rickflow.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rickflow Running and Analyzing OpenMM Jobs @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.7.0-20200529`` | ``-Python-3.7.4`` | ``intel/2019b`` ``0.7.0`` | ``-Python-3.7.4`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rioxarray.md b/docs/version-specific/supported-software/r/rioxarray.md index 09617817e..e360e6170 100644 --- a/docs/version-specific/supported-software/r/rioxarray.md +++ b/docs/version-specific/supported-software/r/rioxarray.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rioxarray geospatial xarray extension powered by rasterio @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``0.11.1`` | | ``foss/2021b`` ``0.14.0`` | | ``foss/2022a`` ``0.15.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/ripunzip.md b/docs/version-specific/supported-software/r/ripunzip.md index e62c23df1..a1c14206a 100644 --- a/docs/version-specific/supported-software/r/ripunzip.md +++ b/docs/version-specific/supported-software/r/ripunzip.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ripunzip A tool to unzip files in parallel. @@ -7,3 +11,6 @@ A tool to unzip files in parallel. version | toolchain --------|---------- ``0.4.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rising.md b/docs/version-specific/supported-software/r/rising.md index 32f5a97e7..1fd7b60fe 100644 --- a/docs/version-specific/supported-software/r/rising.md +++ b/docs/version-specific/supported-software/r/rising.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rising Provides everything needed for high performance data loading and augmentation in PyTorch. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.2.2`` | | ``foss/2021a`` ``0.2.2`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.2.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rjags.md b/docs/version-specific/supported-software/r/rjags.md index 46c9fd7f5..0f0bfc058 100644 --- a/docs/version-specific/supported-software/r/rjags.md +++ b/docs/version-specific/supported-software/r/rjags.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rjags The rjags package is an interface to the JAGS library. @@ -22,3 +26,6 @@ version | versionsuffix | toolchain ``4-6`` | ``-R-3.4.3`` | ``intel/2017b`` ``4-8`` | ``-R-3.5.1`` | ``foss/2018b`` ``4-9`` | ``-R-3.6.0`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rmarkdown.md b/docs/version-specific/supported-software/r/rmarkdown.md index d484de9bf..49a6d8540 100644 --- a/docs/version-specific/supported-software/r/rmarkdown.md +++ b/docs/version-specific/supported-software/r/rmarkdown.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rmarkdown Convert R Markdown documents into a variety of formats. @@ -7,3 +11,6 @@ Convert R Markdown documents into a variety of formats. version | versionsuffix | toolchain --------|---------------|---------- ``2.20`` | ``-R-4.1.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rnaQUAST.md b/docs/version-specific/supported-software/r/rnaQUAST.md index 787fbda7c..b13a9b841 100644 --- a/docs/version-specific/supported-software/r/rnaQUAST.md +++ b/docs/version-specific/supported-software/r/rnaQUAST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rnaQUAST rnaQUAST is a tool for evaluating RNA-Seq assemblies using reference genome and gene database. In addition, rnaQUAST is also capable of estimating gene database coverage by raw reads and de novo quality assessment using third-party software. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.5.2`` | ``-Python-2.7.15`` | ``foss/2018b`` ``2.2.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``2.2.2`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rocm-cmake.md b/docs/version-specific/supported-software/r/rocm-cmake.md index 97405d880..f3603c209 100644 --- a/docs/version-specific/supported-software/r/rocm-cmake.md +++ b/docs/version-specific/supported-software/r/rocm-cmake.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rocm-cmake ROCM cmake modules provides cmake modules for common build tasks needed for the ROCM software stack @@ -7,3 +11,6 @@ ROCM cmake modules provides cmake modules for common build tasks needed for the version | toolchain --------|---------- ``4.5.0`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rocm-smi.md b/docs/version-specific/supported-software/r/rocm-smi.md index 3461789b3..23bcf9d1a 100644 --- a/docs/version-specific/supported-software/r/rocm-smi.md +++ b/docs/version-specific/supported-software/r/rocm-smi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rocm-smi The ROCm System Management Interface Library, or ROCm SMI library, is part of the Radeon Open Compute ROCm software stack. It is a C library for Linux that provides a user space interface for applications to monitor and control GPU applications. @@ -9,3 +13,6 @@ version | toolchain ``4.5.0`` | ``GCCcore/11.2.0`` ``5.4.4`` | ``GCCcore/11.3.0`` ``5.6.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rocminfo.md b/docs/version-specific/supported-software/r/rocminfo.md index f1f81bb03..0796c8283 100644 --- a/docs/version-specific/supported-software/r/rocminfo.md +++ b/docs/version-specific/supported-software/r/rocminfo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rocminfo ROCm Application for Reporting System Info @@ -7,3 +11,6 @@ ROCm Application for Reporting System Info version | toolchain --------|---------- ``4.5.0`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/root_numpy.md b/docs/version-specific/supported-software/r/root_numpy.md index 585ac3717..90984977d 100644 --- a/docs/version-specific/supported-software/r/root_numpy.md +++ b/docs/version-specific/supported-software/r/root_numpy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # root_numpy root_numpy is a Python extension module that provides an efficient interface between ROOT and NumPy. root_numpy’s internals are compiled C++ and can therefore handle large amounts of data much faster than equivalent pure Python implementations. @@ -7,3 +11,6 @@ root_numpy is a Python extension module that provides an efficient interface bet version | versionsuffix | toolchain --------|---------------|---------- ``4.8.0`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rootpy.md b/docs/version-specific/supported-software/r/rootpy.md index 904e2862e..b3161c850 100644 --- a/docs/version-specific/supported-software/r/rootpy.md +++ b/docs/version-specific/supported-software/r/rootpy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rootpy The rootpy project is a community-driven initiative aiming to provide a more pythonic interface with ROOT on top of the existing PyROOT bindings. Given Python’s reflective and dynamic nature, rootpy also aims to improve ROOT design flaws and supplement existing ROOT functionality. The scientific Python community also offers a multitude of powerful packages such as SciPy, NumPy, matplotlib, scikit-learn, and PyTables, but a suitable interface between them and ROOT has been lacking. rootpy provides the interfaces and conversion mechanisms required to liberate your data and to take advantage of these alternatives if needed. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.8.0`` | ``-Python-2.7.11`` | ``foss/2016a`` ``1.0.1`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rpmrebuild.md b/docs/version-specific/supported-software/r/rpmrebuild.md index 2be619a10..43084f97e 100644 --- a/docs/version-specific/supported-software/r/rpmrebuild.md +++ b/docs/version-specific/supported-software/r/rpmrebuild.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rpmrebuild rpmrebuild is a tool to build an RPM file from a package that has already been installed in a basic use @@ -7,3 +11,6 @@ rpmrebuild is a tool to build an RPM file from a package that has already been version | toolchain --------|---------- ``2.11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rpy2.md b/docs/version-specific/supported-software/r/rpy2.md index 29aaf7894..87e214e67 100644 --- a/docs/version-specific/supported-software/r/rpy2.md +++ b/docs/version-specific/supported-software/r/rpy2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rpy2 rpy2 is a redesign and rewrite of rpy. It is providing a low-level interface to R from Python, a proposed high-level interface, including wrappers to graphical libraries, as well as R-like structures and functions. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``3.4.5`` | | ``foss/2021a`` ``3.4.5`` | | ``foss/2021b`` ``3.5.15`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rstanarm.md b/docs/version-specific/supported-software/r/rstanarm.md index 5d348bdb3..cafc69ecd 100644 --- a/docs/version-specific/supported-software/r/rstanarm.md +++ b/docs/version-specific/supported-software/r/rstanarm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rstanarm Estimates previously compiled regression models using the 'rstan' package, which provides the R interface to the Stan C++ library for Bayesian estimation. @@ -7,3 +11,6 @@ Estimates previously compiled regression models using the 'rstan' package, which version | versionsuffix | toolchain --------|---------------|---------- ``2.19.3`` | ``-R-3.6.2`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/ruamel.yaml.md b/docs/version-specific/supported-software/r/ruamel.yaml.md index fa92ce87f..69e53ebe8 100644 --- a/docs/version-specific/supported-software/r/ruamel.yaml.md +++ b/docs/version-specific/supported-software/r/ruamel.yaml.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ruamel.yaml ruamel.yaml is a YAML 1.2 loader/dumper package for Python. @@ -12,3 +16,6 @@ version | toolchain ``0.17.21`` | ``GCCcore/12.2.0`` ``0.17.32`` | ``GCCcore/12.3.0`` ``0.18.6`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/ruffus.md b/docs/version-specific/supported-software/r/ruffus.md index f26e18cb4..8dd944de9 100644 --- a/docs/version-specific/supported-software/r/ruffus.md +++ b/docs/version-specific/supported-software/r/ruffus.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ruffus Ruffus is a Computation Pipeline library for python. It is open-sourced, powerful and user-friendly, and widely used in science and bioinformatics. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.8.4`` | ``GCCcore/11.3.0`` ``2.8.4`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/ruptures.md b/docs/version-specific/supported-software/r/ruptures.md index 5b6ae5320..bfb906db3 100644 --- a/docs/version-specific/supported-software/r/ruptures.md +++ b/docs/version-specific/supported-software/r/ruptures.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ruptures ruptures is a Python library for off-line change point detection. This package provides methods for the analysis and segmentation of non-stationary signals. Implemented algorithms include exact and approximate detection for various parametric and non-parametric models. ruptures focuses on ease of use by providing a well-documented and consistent interface. In addition, thanks to its modular structure, different algorithms and models can be connected and extended within this package. @@ -7,3 +11,6 @@ ruptures is a Python library for off-line change point detection. This package p version | toolchain --------|---------- ``1.1.8`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/r/rustworkx.md b/docs/version-specific/supported-software/r/rustworkx.md index 4acb9fecd..a5bbadf8c 100644 --- a/docs/version-specific/supported-software/r/rustworkx.md +++ b/docs/version-specific/supported-software/r/rustworkx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # rustworkx rustworkx (previously retworkx) is a general purpose graph library for Python written in Rust to take advantage of the performance and safety that Rust provides. It is designed to provide a high performance general purpose graph library for any Python application. @@ -7,3 +11,6 @@ rustworkx (previously retworkx) is a general purpose graph library for Python wr version | toolchain --------|---------- ``0.12.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/S-Lang.md b/docs/version-specific/supported-software/s/S-Lang.md index 1747c1287..0240a3e9e 100644 --- a/docs/version-specific/supported-software/s/S-Lang.md +++ b/docs/version-specific/supported-software/s/S-Lang.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # S-Lang S-Lang is a multi-platform programmer's library designed to allow a developer to create robust multi-platform software. It provides facilities required by interactive applications such as display/screen management, keyboard input, keymaps, and so on. @@ -7,3 +11,6 @@ S-Lang is a multi-platform programmer's library designed to allow a developer t version | toolchain --------|---------- ``2.3.0`` | ``GCC/4.9.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/S4.md b/docs/version-specific/supported-software/s/S4.md index 6807d9082..55a82720e 100644 --- a/docs/version-specific/supported-software/s/S4.md +++ b/docs/version-specific/supported-software/s/S4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # S4 S4 stands for Stanford Stratified Structure Solver, a frequency domain code to solve the linear Maxwell’s equations in layered periodic structures. Internally, it uses Rigorous Coupled Wave Analysis (RCWA, also called the Fourier Modal Method (FMM)) and the S-matrix algorithm. @@ -7,3 +11,6 @@ S4 stands for Stanford Stratified Structure Solver, a frequency domain code to version | toolchain --------|---------- ``1.1.1-20180610`` | ``foss/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SAGE.md b/docs/version-specific/supported-software/s/SAGE.md index 0af2cdc58..86a793f6e 100644 --- a/docs/version-specific/supported-software/s/SAGE.md +++ b/docs/version-specific/supported-software/s/SAGE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SAGE S.A.G.E. (Statistical Analysis for Genetic Epidemiology) is free software package containing programs for use in the genetic analysis of family, pedigree and individual data. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``6.3`` | ``system`` ``6.4`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SALMON-TDDFT.md b/docs/version-specific/supported-software/s/SALMON-TDDFT.md index 8e62d0e31..5c0fdd2b8 100644 --- a/docs/version-specific/supported-software/s/SALMON-TDDFT.md +++ b/docs/version-specific/supported-software/s/SALMON-TDDFT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SALMON-TDDFT SALMON is an open-source computer program for ab-initio quantum-mechanical calculations of electron dynamics at the nanoscale that takes place in various situations of light-matter interactions. It is based on time-dependent density functional theory, solving time-dependent Kohn-Sham equation in real time and real space with norm-conserving pseudopotentials. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.2.1`` | ``foss/2018b`` ``1.2.1`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SALib.md b/docs/version-specific/supported-software/s/SALib.md index fc519a04d..baffe5c2b 100644 --- a/docs/version-specific/supported-software/s/SALib.md +++ b/docs/version-specific/supported-software/s/SALib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SALib Sensitivity Analysis Library in Python (Numpy). Contains Sobol, Morris, Fractional Factorial and FAST methods. @@ -7,3 +11,6 @@ Sensitivity Analysis Library in Python (Numpy). Contains Sobol, Morris, Fraction version | versionsuffix | toolchain --------|---------------|---------- ``1.1.3`` | ``-Python-2.7.14`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SAMtools.md b/docs/version-specific/supported-software/s/SAMtools.md index 305c42c2c..207e46e14 100644 --- a/docs/version-specific/supported-software/s/SAMtools.md +++ b/docs/version-specific/supported-software/s/SAMtools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SAMtools SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format. @@ -67,3 +71,6 @@ version | versionsuffix | toolchain ``1.9`` | | ``foss/2018b`` ``1.9`` | | ``iccifort/2019.1.144-GCC-8.2.0-2.31.1`` ``1.9`` | | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SAP.md b/docs/version-specific/supported-software/s/SAP.md index b33b11051..e7d861a04 100644 --- a/docs/version-specific/supported-software/s/SAP.md +++ b/docs/version-specific/supported-software/s/SAP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SAP SAP is a pairwise structure alignment via double dynamic programming @@ -7,3 +11,6 @@ SAP is a pairwise structure alignment via double dynamic programming version | toolchain --------|---------- ``1.1.3`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SAS.md b/docs/version-specific/supported-software/s/SAS.md index 2be30be4c..e6cb2979b 100644 --- a/docs/version-specific/supported-software/s/SAS.md +++ b/docs/version-specific/supported-software/s/SAS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SAS SAS is a software suite for advanced analytics, multivariate analyses, business intelligence, data management, and predictive analytics. @@ -7,3 +11,6 @@ SAS is a software suite for advanced analytics, multivariate analyses, business version | toolchain --------|---------- ``9.4`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SBCL.md b/docs/version-specific/supported-software/s/SBCL.md index e27cf7d99..bff5b2dc4 100644 --- a/docs/version-specific/supported-software/s/SBCL.md +++ b/docs/version-specific/supported-software/s/SBCL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SBCL Steel Bank Common Lisp (SBCL) is a high performance Common Lisp compiler. It is open source / free software, with a permissive license. In addition to the compiler and runtime system for ANSI Common Lisp, it provides an interactive environment including a debugger, a statistical profiler, a code coverage tool, and many other extensions. @@ -10,3 +14,6 @@ version | toolchain ``2.2.1`` | ``GCCcore/10.3.0`` ``2.3.11`` | ``GCCcore/11.3.0`` ``2.4.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SCALCE.md b/docs/version-specific/supported-software/s/SCALCE.md index 769e29e0b..85c88d73d 100644 --- a/docs/version-specific/supported-software/s/SCALCE.md +++ b/docs/version-specific/supported-software/s/SCALCE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SCALCE SCALCE [skeɪlz] is a FASTQ compression tool that uses locally consistet parsing to obtain better compression rate. SCALCE has been specifically designed for Illumina reads but it can handle other technologies (that generate base pair reads) if the read length is the same throughout the file. @@ -7,3 +11,6 @@ SCALCE [skeɪlz] is a FASTQ compression tool that uses locally consistet parsing version | toolchain --------|---------- ``2.7`` | ``GCC/4.8.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SCENIC.md b/docs/version-specific/supported-software/s/SCENIC.md index a7629182c..b03e3f8d5 100644 --- a/docs/version-specific/supported-software/s/SCENIC.md +++ b/docs/version-specific/supported-software/s/SCENIC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SCENIC SCENIC Suite is a set of tools to study and decipher gene regulation. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.2.4`` | ``-R-4.1.0`` | ``foss/2021a`` ``1.3.0`` | ``-R-4.2.1`` | ``foss/2022a`` ``1.3.0`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SCGid.md b/docs/version-specific/supported-software/s/SCGid.md index e6edc3ba0..d8bdf90a5 100644 --- a/docs/version-specific/supported-software/s/SCGid.md +++ b/docs/version-specific/supported-software/s/SCGid.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SCGid A consensus approach to contig filtering and genome prediction from single-cell sequencing libraries @@ -7,3 +11,6 @@ A consensus approach to contig filtering and genome prediction from single-cell version | toolchain --------|---------- ``0.9b0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SCIP.md b/docs/version-specific/supported-software/s/SCIP.md index ef66f8bef..bfda04152 100644 --- a/docs/version-specific/supported-software/s/SCIP.md +++ b/docs/version-specific/supported-software/s/SCIP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SCIP SCIP is currently one of the fastest non-commercial solvers for mixed integer programming (MIP) and mixed integer nonlinear programming (MINLP). It is also a framework for constraint integer programming and branch-cut-and-price. It allows for total control of the solution process and the access of detailed information down to the guts of the solver. @@ -7,3 +11,6 @@ SCIP is currently one of the fastest non-commercial solvers for mixed integer pr version | toolchain --------|---------- ``3.2.1`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SCIPhI.md b/docs/version-specific/supported-software/s/SCIPhI.md index d7d32fbbc..a8ed5476b 100644 --- a/docs/version-specific/supported-software/s/SCIPhI.md +++ b/docs/version-specific/supported-software/s/SCIPhI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SCIPhI Single-cell mutation identification via phylogenetic inference (SCIPhI) is a new approach to mutation detection in individual tumor cells by leveraging the evolutionary relationship among cells. @@ -7,3 +11,6 @@ Single-cell mutation identification via phylogenetic inference (SCIPhI) is a new version | toolchain --------|---------- ``0.1.3`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SCOOP.md b/docs/version-specific/supported-software/s/SCOOP.md index 1db38c6a7..3a81e7834 100644 --- a/docs/version-specific/supported-software/s/SCOOP.md +++ b/docs/version-specific/supported-software/s/SCOOP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SCOOP SCOOP (Scalable COncurrent Operations in Python) is a distributed task module allowing concurrent parallel programming on various environments, from heterogeneous grids to supercomputers. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.7.1.1`` | ``-Python-2.7.11`` | ``intel/2016a`` ``0.7.1.1`` | ``-Python-3.5.1`` | ``intel/2016a`` ``0.7.1.1`` | ``-Python-2.7.14`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SCOTCH.md b/docs/version-specific/supported-software/s/SCOTCH.md index ba8d8129e..a0ab1aa77 100644 --- a/docs/version-specific/supported-software/s/SCOTCH.md +++ b/docs/version-specific/supported-software/s/SCOTCH.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SCOTCH Software package and libraries for sequential and parallel graph partitioning, static mapping, and sparse matrix block ordering, and sequential mesh and hypergraph partitioning. @@ -39,3 +43,6 @@ version | versionsuffix | toolchain ``7.0.3`` | | ``gompi/2022b`` ``7.0.3`` | | ``gompi/2023a`` ``7.0.4`` | | ``gompi/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SCReadCounts.md b/docs/version-specific/supported-software/s/SCReadCounts.md index 8404eee4b..c8a81e1e0 100644 --- a/docs/version-specific/supported-software/s/SCReadCounts.md +++ b/docs/version-specific/supported-software/s/SCReadCounts.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SCReadCounts SCReadCounts is a computational tool for a cell-level assessment of the read counts bearing a particular nucleotide at genomic positions of interest from single cell RNA sequencing (scRNA-seq) data. @@ -7,3 +11,6 @@ SCReadCounts is a computational tool for a cell-level assessment of the read cou version | toolchain --------|---------- ``1.4.0`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SCnorm.md b/docs/version-specific/supported-software/s/SCnorm.md index bf1dc4749..97aa0fc19 100644 --- a/docs/version-specific/supported-software/s/SCnorm.md +++ b/docs/version-specific/supported-software/s/SCnorm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SCnorm This package implements SCnorm — a method to normalize single-cell RNA-seq data. @@ -7,3 +11,6 @@ This package implements SCnorm — a method to normalize single-cell RNA-seq dat version | versionsuffix | toolchain --------|---------------|---------- ``0.99.7`` | ``-R-3.4.0`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SCons.md b/docs/version-specific/supported-software/s/SCons.md index c251660a3..6d331530f 100644 --- a/docs/version-specific/supported-software/s/SCons.md +++ b/docs/version-specific/supported-software/s/SCons.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SCons SCons is a software construction tool. @@ -38,3 +42,6 @@ version | versionsuffix | toolchain ``4.4.0`` | | ``GCCcore/11.3.0`` ``4.5.2`` | | ``GCCcore/12.3.0`` ``4.6.0`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SCopeLoomR.md b/docs/version-specific/supported-software/s/SCopeLoomR.md index 85ea26089..fc139c27c 100644 --- a/docs/version-specific/supported-software/s/SCopeLoomR.md +++ b/docs/version-specific/supported-software/s/SCopeLoomR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SCopeLoomR An R package (compatible with SCope) to create generic .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters and markers, ... @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.13.0`` | ``-R-4.1.2`` | ``foss/2021b`` ``0.13.0_20220408`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SDCC.md b/docs/version-specific/supported-software/s/SDCC.md index fdea9b49c..c9049cb12 100644 --- a/docs/version-specific/supported-software/s/SDCC.md +++ b/docs/version-specific/supported-software/s/SDCC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SDCC SDCC is a retargettable, optimizing ANSI - C compiler suite that targets the Intel MCS51 based microprocessors (8031, 8032, 8051, 8052, etc.), Maxim (formerly Dallas) DS80C390 variants, Freescale (formerly Motorola) HC08 based (hc08, s08) and Zilog Z80 based MCUs (z80, z180, gbz80, Rabbit 2000/3000, Rabbit 3000A). Work is in progress on supporting the Microchip PIC16 and PIC18 targets. It can be retargeted for other microprocessors. @@ -7,3 +11,6 @@ SDCC is a retargettable, optimizing ANSI - C compiler suite that targets the In version | toolchain --------|---------- ``3.3.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SDL.md b/docs/version-specific/supported-software/s/SDL.md index bdd0dcc29..d08e93955 100644 --- a/docs/version-specific/supported-software/s/SDL.md +++ b/docs/version-specific/supported-software/s/SDL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SDL SDL: Simple DirectMedia Layer, a cross-platform multimedia library @@ -7,3 +11,6 @@ SDL: Simple DirectMedia Layer, a cross-platform multimedia library version | toolchain --------|---------- ``1.2.15`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SDL2.md b/docs/version-specific/supported-software/s/SDL2.md index a589a53bb..242f0956f 100644 --- a/docs/version-specific/supported-software/s/SDL2.md +++ b/docs/version-specific/supported-software/s/SDL2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SDL2 SDL: Simple DirectMedia Layer, a cross-platform multimedia library @@ -23,3 +27,6 @@ version | toolchain ``2.26.3`` | ``GCCcore/12.2.0`` ``2.28.2`` | ``GCCcore/12.3.0`` ``2.28.5`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SDL2_gfx.md b/docs/version-specific/supported-software/s/SDL2_gfx.md index 2ccb1ab07..328b929a2 100644 --- a/docs/version-specific/supported-software/s/SDL2_gfx.md +++ b/docs/version-specific/supported-software/s/SDL2_gfx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SDL2_gfx Graphics drawing primitives library for SDL2 @@ -7,3 +11,6 @@ Graphics drawing primitives library for SDL2 version | toolchain --------|---------- ``1.0.4`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SDL2_image.md b/docs/version-specific/supported-software/s/SDL2_image.md index 232f9a6c0..64815f1b4 100644 --- a/docs/version-specific/supported-software/s/SDL2_image.md +++ b/docs/version-specific/supported-software/s/SDL2_image.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SDL2_image SDL_image is an image file loading library. @@ -9,3 +13,6 @@ version | toolchain ``2.0.3`` | ``GCCcore/6.4.0`` ``2.6.3`` | ``GCCcore/11.3.0`` ``2.8.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SDL2_mixer.md b/docs/version-specific/supported-software/s/SDL2_mixer.md index d523c3c70..9fe059aa5 100644 --- a/docs/version-specific/supported-software/s/SDL2_mixer.md +++ b/docs/version-specific/supported-software/s/SDL2_mixer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SDL2_mixer Due to popular demand, here is a simple multi-channel audio mixer. It supports 8 channels of 16 bit stereo audio, plus a single channel of music. It can load FLAC, MP3, Ogg, VOC, and WAV format audio. It can also load MIDI, MOD, and Opus audio, depending on build options (see the note below for details.) @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.6.3`` | ``GCCcore/11.3.0`` ``2.8.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SDL2_ttf.md b/docs/version-specific/supported-software/s/SDL2_ttf.md index c0b393de2..95485d736 100644 --- a/docs/version-specific/supported-software/s/SDL2_ttf.md +++ b/docs/version-specific/supported-software/s/SDL2_ttf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SDL2_ttf This library is a wrapper around the FreeType and Harfbuzz libraries, allowing you to use TrueType fonts to render text in SDL applications. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.20.2`` | ``GCCcore/11.3.0`` ``2.22.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SDL_image.md b/docs/version-specific/supported-software/s/SDL_image.md index d3a73eb60..fce83e900 100644 --- a/docs/version-specific/supported-software/s/SDL_image.md +++ b/docs/version-specific/supported-software/s/SDL_image.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SDL_image SDL_image is an image file loading library. @@ -7,3 +11,6 @@ SDL_image is an image file loading library. version | toolchain --------|---------- ``1.2.12`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SDSL.md b/docs/version-specific/supported-software/s/SDSL.md index 73b3dd83f..4d8afd4fa 100644 --- a/docs/version-specific/supported-software/s/SDSL.md +++ b/docs/version-specific/supported-software/s/SDSL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SDSL The Succinct Data Structure Library (SDSL) is a powerful and flexible C++11 library implementing succinct data structures. @@ -7,3 +11,6 @@ The Succinct Data Structure Library (SDSL) is a powerful and flexible C++11 libr version | toolchain --------|---------- ``2.1.1-20191211`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SEACells.md b/docs/version-specific/supported-software/s/SEACells.md index 410a93072..04a177138 100644 --- a/docs/version-specific/supported-software/s/SEACells.md +++ b/docs/version-specific/supported-software/s/SEACells.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SEACells SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data @@ -7,3 +11,6 @@ SEACells algorithm for Inference of transcriptional and epigenomic cellular stat version | toolchain --------|---------- ``20230731`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SECAPR.md b/docs/version-specific/supported-software/s/SECAPR.md index d15fccd1a..f1cbaf23f 100644 --- a/docs/version-specific/supported-software/s/SECAPR.md +++ b/docs/version-specific/supported-software/s/SECAPR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SECAPR SECAPR is a bioinformatics pipeline for the rapid and user-friendly processing of targeted enriched Illumina sequences, from raw reads to alignments @@ -7,3 +11,6 @@ SECAPR is a bioinformatics pipeline for the rapid and user-friendly processing o version | versionsuffix | toolchain --------|---------------|---------- ``1.1.15`` | ``-Python-2.7.16`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SELFIES.md b/docs/version-specific/supported-software/s/SELFIES.md index 4b0cb0c23..37ee00a60 100644 --- a/docs/version-specific/supported-software/s/SELFIES.md +++ b/docs/version-specific/supported-software/s/SELFIES.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SELFIES Robust representation of semantically constrained graphs, in particular for molecules in chemistry @@ -7,3 +11,6 @@ Robust representation of semantically constrained graphs, in particular for mole version | toolchain --------|---------- ``2.1.1`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SEPP.md b/docs/version-specific/supported-software/s/SEPP.md index b5f34a2b3..6fc746cc5 100644 --- a/docs/version-specific/supported-software/s/SEPP.md +++ b/docs/version-specific/supported-software/s/SEPP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SEPP SATe-enabled Phylogenetic Placement - addresses the problem of phylogenetic placement of short reads into reference alignments and trees. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``4.5.1`` | | ``foss/2021b`` ``4.5.1`` | | ``foss/2022a`` ``4.5.1`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SHAP.md b/docs/version-specific/supported-software/s/SHAP.md index 7b0b604ee..1245b78b2 100644 --- a/docs/version-specific/supported-software/s/SHAP.md +++ b/docs/version-specific/supported-software/s/SHAP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SHAP SHAP (SHapley Additive exPlanations) is a game theoretic approach to explain the output of any machine learning model. It connects optimal credit allocation with local explanations using the classic Shapley values from game theory and their related extensions. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.41.0`` | | ``foss/2022a`` ``0.42.1`` | ``-Python-3.7.4`` | ``foss/2019b`` ``0.42.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SHAPEIT.md b/docs/version-specific/supported-software/s/SHAPEIT.md index 03c7f9b29..a087e75af 100644 --- a/docs/version-specific/supported-software/s/SHAPEIT.md +++ b/docs/version-specific/supported-software/s/SHAPEIT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SHAPEIT SHAPEIT is a fast and accurate method for estimation of haplotypes (aka phasing) from genotype or sequencing data. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.r837`` | ``.GLIBCv2.12`` | ``system`` ``2.r904`` | ``.glibcv2.17`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SHAPEIT4.md b/docs/version-specific/supported-software/s/SHAPEIT4.md index 676f7d333..93ca42259 100644 --- a/docs/version-specific/supported-software/s/SHAPEIT4.md +++ b/docs/version-specific/supported-software/s/SHAPEIT4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SHAPEIT4 SHAPEIT4 is a fast and accurate method for estimation of haplotypes (aka phasing) for SNP array and high coverage sequencing data. @@ -12,3 +16,6 @@ version | toolchain ``4.2.0`` | ``foss/2020b`` ``4.2.2`` | ``foss/2020b`` ``4.2.2`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SHORE.md b/docs/version-specific/supported-software/s/SHORE.md index 8004641b0..4f6d3778e 100644 --- a/docs/version-specific/supported-software/s/SHORE.md +++ b/docs/version-specific/supported-software/s/SHORE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SHORE SHORE, for Short Read, is a mapping and analysis pipeline for short read data produced on the Illumina platform. @@ -7,3 +11,6 @@ SHORE, for Short Read, is a mapping and analysis pipeline for short read data pr version | toolchain --------|---------- ``0.9.3`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SHTns.md b/docs/version-specific/supported-software/s/SHTns.md index 6d33b0bce..fcb859a00 100644 --- a/docs/version-specific/supported-software/s/SHTns.md +++ b/docs/version-specific/supported-software/s/SHTns.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SHTns Spherical Harmonic Transform library aimed at high performance numerical simulations in spherical geometries. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.7`` | ``foss/2021b`` ``3.5.1`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SICER2.md b/docs/version-specific/supported-software/s/SICER2.md index c62aebd71..e3ede2bef 100644 --- a/docs/version-specific/supported-software/s/SICER2.md +++ b/docs/version-specific/supported-software/s/SICER2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SICER2 Redesigned and improved ChIP-seq broad peak calling tool SICER @@ -7,3 +11,6 @@ Redesigned and improved ChIP-seq broad peak calling tool SICER version | versionsuffix | toolchain --------|---------------|---------- ``1.0.3`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SIMPLE.md b/docs/version-specific/supported-software/s/SIMPLE.md index c28c870df..fa4f5e0c5 100644 --- a/docs/version-specific/supported-software/s/SIMPLE.md +++ b/docs/version-specific/supported-software/s/SIMPLE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SIMPLE Single-particle IMage Processing Linux Engine is a program package for cryo-EM image processing, focusing on ab initio 3D reconstruction of low-symmetry single-particles. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.5`` | ``foss/2018a`` ``3.0.0`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SIONlib.md b/docs/version-specific/supported-software/s/SIONlib.md index 8909e74ea..f29482c4b 100644 --- a/docs/version-specific/supported-software/s/SIONlib.md +++ b/docs/version-specific/supported-software/s/SIONlib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SIONlib SIONlib is a scalable I/O library for parallel access to task-local files. The library not only supports writing and reading binary data to or from several thousands of processors into a single or a small number of physical files, but also provides global open and close functions to access SIONlib files in parallel. This package provides a stripped-down installation of SIONlib for use with performance tools (e.g., Score-P), with renamed symbols to avoid conflicts when an application using SIONlib itself is linked against a tool requiring a different SIONlib version. @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``1.7.7`` | ``-tools`` | ``GCCcore/12.2.0`` ``1.7.7`` | ``-tools`` | ``GCCcore/12.3.0`` ``1.7.7`` | ``-tools`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SIP.md b/docs/version-specific/supported-software/s/SIP.md index dade2d7b4..d5870f707 100644 --- a/docs/version-specific/supported-software/s/SIP.md +++ b/docs/version-specific/supported-software/s/SIP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SIP SIP is a tool that makes it very easy to create Python bindings for C and C++ libraries. @@ -21,3 +25,6 @@ version | versionsuffix | toolchain ``4.19.8`` | ``-Python-2.7.14`` | ``intel/2018a`` ``4.19.8`` | ``-Python-3.6.4`` | ``intel/2018a`` ``6.8.1`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SISSO++.md b/docs/version-specific/supported-software/s/SISSO++.md index 1c129a30e..01a3c1361 100644 --- a/docs/version-specific/supported-software/s/SISSO++.md +++ b/docs/version-specific/supported-software/s/SISSO++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SISSO++ C++ implementation of SISSO with built in Python bindings for an efficient python interface @@ -7,3 +11,6 @@ C++ implementation of SISSO with built in Python bindings for an efficient pytho version | toolchain --------|---------- ``1.1`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SISSO.md b/docs/version-specific/supported-software/s/SISSO.md index e54356e50..b5b15f684 100644 --- a/docs/version-specific/supported-software/s/SISSO.md +++ b/docs/version-specific/supported-software/s/SISSO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SISSO A data-driven method combining symbolic regression and compressed sensing toward accurate & interpretable models. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.0.2`` | ``iimpi/2021b`` ``3.1-20220324`` | ``iimpi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SKESA.md b/docs/version-specific/supported-software/s/SKESA.md index 6b96c767b..84d2c7504 100644 --- a/docs/version-specific/supported-software/s/SKESA.md +++ b/docs/version-specific/supported-software/s/SKESA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SKESA SKESA is a de-novo sequence read assembler for cultured single isolate genomes based on DeBruijn graphs. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.2`` | | ``foss/2018a`` ``2.3.0`` | | ``foss/2018b`` ``2.4.0`` | ``_saute.1.3.0_1`` | ``gompi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SLATEC.md b/docs/version-specific/supported-software/s/SLATEC.md index a55b27295..18daff209 100644 --- a/docs/version-specific/supported-software/s/SLATEC.md +++ b/docs/version-specific/supported-software/s/SLATEC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SLATEC SLATEC Common Mathematical Library, a comprehensive software library containing over 1400 general purpose mathematical and statistical routines written in Fortran 77. @@ -9,3 +13,6 @@ version | toolchain ``4.1`` | ``GCC/6.4.0-2.28`` ``4.1`` | ``GCC/8.3.0`` ``4.1`` | ``iccifort/2018.1.163-GCC-6.4.0-2.28`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SLEPc.md b/docs/version-specific/supported-software/s/SLEPc.md index d7d7737f7..f8265353f 100644 --- a/docs/version-specific/supported-software/s/SLEPc.md +++ b/docs/version-specific/supported-software/s/SLEPc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SLEPc SLEPc (Scalable Library for Eigenvalue Problem Computations) is a software library for the solution of large scale sparse eigenvalue problems on parallel computers. It is an extension of PETSc and can be used for either standard or generalized eigenproblems, with real or complex arithmetic. It can also be used for computing a partial SVD of a large, sparse, rectangular matrix, and to solve quadratic eigenvalue problems. @@ -19,3 +23,6 @@ version | versionsuffix | toolchain ``3.20.1`` | | ``foss/2023a`` ``3.8.3`` | | ``foss/2017b`` ``3.9.2`` | | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SLiM.md b/docs/version-specific/supported-software/s/SLiM.md index a5934526d..ac540a6f2 100644 --- a/docs/version-specific/supported-software/s/SLiM.md +++ b/docs/version-specific/supported-software/s/SLiM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SLiM SLiM is an evolutionary simulation framework that combines a powerful engine for population genetic simulations with the capability of modeling arbitrarily complex evolutionary scenarios. @@ -9,3 +13,6 @@ version | toolchain ``3.4`` | ``GCC/9.3.0`` ``4.0`` | ``GCC/11.2.0`` ``4.0.1`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SMAP.md b/docs/version-specific/supported-software/s/SMAP.md index 8fdede495..29d4ca0d6 100644 --- a/docs/version-specific/supported-software/s/SMAP.md +++ b/docs/version-specific/supported-software/s/SMAP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SMAP SMAP is an analysis tool for stack-based NGS read mapping @@ -7,3 +11,6 @@ SMAP is an analysis tool for stack-based NGS read mapping version | toolchain --------|---------- ``4.6.5`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SMARTdenovo.md b/docs/version-specific/supported-software/s/SMARTdenovo.md index a12c0ec03..8dc7eb109 100644 --- a/docs/version-specific/supported-software/s/SMARTdenovo.md +++ b/docs/version-specific/supported-software/s/SMARTdenovo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SMARTdenovo SMARTdenovo is a de novo assembler for PacBio and Oxford Nanopore (ONT) data. It produces an assembly from all-vs-all raw read alignments without an error correction stage. It also provides tools to generate accurate consensus sequences, though a platform dependent consensus polish tools (e.g. Quiver for PacBio or Nanopolish for ONT) are still required for higher accuracy. @@ -7,3 +11,6 @@ SMARTdenovo is a de novo assembler for PacBio and Oxford Nanopore (ONT) data. It version | toolchain --------|---------- ``20180219`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SMC++.md b/docs/version-specific/supported-software/s/SMC++.md index ab902e9c4..96edb2fc1 100644 --- a/docs/version-specific/supported-software/s/SMC++.md +++ b/docs/version-specific/supported-software/s/SMC++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SMC++ SMC++ is a program for estimating the size history of populations from whole genome sequence data. @@ -7,3 +11,6 @@ SMC++ is a program for estimating the size history of populations from whole gen version | toolchain --------|---------- ``1.15.4`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SMRT-Link.md b/docs/version-specific/supported-software/s/SMRT-Link.md index 6d754ec98..42b51f886 100644 --- a/docs/version-specific/supported-software/s/SMRT-Link.md +++ b/docs/version-specific/supported-software/s/SMRT-Link.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SMRT-Link PacBio's open-source SMRT Analysis software suite is designed for use with Single Molecule, Real-Time (SMRT) Sequencing data. You can analyze, visualize, and manage your data through an intuitive GUI or command-line interface. You can also integrate SMRT Analysis in your existing data workflow through the extensive set of APIs provided @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``12.0.0.177059`` | ``-cli-tools-only`` | ``system`` ``5.1.0.26412`` | ``-cli-tools-only`` | ``system`` ``6.0.0.47841`` | ``-cli-tools-only`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SMV.md b/docs/version-specific/supported-software/s/SMV.md index 8f5d99805..96174ba83 100644 --- a/docs/version-specific/supported-software/s/SMV.md +++ b/docs/version-specific/supported-software/s/SMV.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SMV Smokeview is a visualization program that displays output of FDS and CFAST simulations. @@ -7,3 +11,6 @@ Smokeview is a visualization program that displays output of FDS and CFAST simul version | toolchain --------|---------- ``6.7.17`` | ``iccifort/2020.4.304`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SNAP-ESA-python.md b/docs/version-specific/supported-software/s/SNAP-ESA-python.md index 247fa8f3c..f5616a990 100644 --- a/docs/version-specific/supported-software/s/SNAP-ESA-python.md +++ b/docs/version-specific/supported-software/s/SNAP-ESA-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SNAP-ESA-python Python interface to the Sentinel Application Platform (SNAP) API @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``8.0`` | ``-Java-1.8-Python-2.7.18`` | ``GCCcore/10.2.0`` ``9.0.0`` | ``-Java-11-Python-2.7.18`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SNAP-ESA.md b/docs/version-specific/supported-software/s/SNAP-ESA.md index f6a47d38b..36d605cc7 100644 --- a/docs/version-specific/supported-software/s/SNAP-ESA.md +++ b/docs/version-specific/supported-software/s/SNAP-ESA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SNAP-ESA The Sentinel Application Platform (SNAP) is a common architecture for all Sentinel Toolboxes being jointly developed by Brockmann Consult, SkyWatch and C-S. The SNAP architecture is ideal for Earth Observation processing and analysis due to the following technological innovations: Extensibility, Portability, Modular Rich Client Platform, Generic EO Data Abstraction, Tiled Memory Management, and a Graph Processing Framework. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``8.0`` | ``-Java-1.8`` | ``system`` ``9.0.0`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SNAP-HMM.md b/docs/version-specific/supported-software/s/SNAP-HMM.md index 7076c485a..09f115641 100644 --- a/docs/version-specific/supported-software/s/SNAP-HMM.md +++ b/docs/version-specific/supported-software/s/SNAP-HMM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SNAP-HMM SNAP is a general purpose gene finding program suitable for both eukaryotic and prokaryotic genomes. SNAP is an acroynm for Semi-HMM-based Nucleic Acid Parser. @@ -11,3 +15,6 @@ version | toolchain ``2013-11-29`` | ``iccifort/2017.4.196-GCC-6.4.0-2.28`` ``20190603`` | ``GCC/10.2.0`` ``20221022`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SNAP.md b/docs/version-specific/supported-software/s/SNAP.md index a90b9c3c1..84ca4b7d1 100644 --- a/docs/version-specific/supported-software/s/SNAP.md +++ b/docs/version-specific/supported-software/s/SNAP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SNAP Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data @@ -10,3 +14,6 @@ version | toolchain ``2.0.1`` | ``GCC/11.2.0`` ``2.0.1`` | ``GCC/11.3.0`` ``2.0.1`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SNAPE-pooled.md b/docs/version-specific/supported-software/s/SNAPE-pooled.md index 145a52117..ecc9b6a0e 100644 --- a/docs/version-specific/supported-software/s/SNAPE-pooled.md +++ b/docs/version-specific/supported-software/s/SNAPE-pooled.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SNAPE-pooled " SNAPE-pooled computes the probability distribution for the frequency of the minor allele in a certain population, at a certain position in the genome. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20150707`` | ``GCC/11.3.0`` ``r32`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SNPhylo.md b/docs/version-specific/supported-software/s/SNPhylo.md index 8b5063215..c12432a67 100644 --- a/docs/version-specific/supported-software/s/SNPhylo.md +++ b/docs/version-specific/supported-software/s/SNPhylo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SNPhylo SNPhylo: a pipeline to generate a phylogenetic tree from huge SNP data @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``20140701`` | | ``intel/2016a`` ``20160204`` | ``-Python-2.7.14-R-3.4.3`` | ``foss/2017b`` ``20160204`` | ``-Python-2.7.14-R-3.4.3`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SNPomatic.md b/docs/version-specific/supported-software/s/SNPomatic.md index 772ed0ef5..2f60ff809 100644 --- a/docs/version-specific/supported-software/s/SNPomatic.md +++ b/docs/version-specific/supported-software/s/SNPomatic.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SNPomatic High throughput sequencing technologies generate large amounts of short reads. Mapping these to a reference sequence consumes large amounts of processing time and memory, and read mapping errors can lead to noisy or incorrect alignments. SNP-o-matic is a fast, memory-efficient, and stringent read mapping tool offering a variety of analytical output functions, with an emphasis on genotyping. @@ -7,3 +11,6 @@ High throughput sequencing technologies generate large amounts of short reads. version | toolchain --------|---------- ``1.0`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SOAPaligner.md b/docs/version-specific/supported-software/s/SOAPaligner.md index 1cf62db93..d47fa201c 100644 --- a/docs/version-specific/supported-software/s/SOAPaligner.md +++ b/docs/version-specific/supported-software/s/SOAPaligner.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SOAPaligner SOAPaligner/soap2 is a member of the SOAP (Short Oligonucleotide Analysis Package). It is an updated version of SOAP software for short oligonucleotide alignment. @@ -7,3 +11,6 @@ SOAPaligner/soap2 is a member of the SOAP (Short Oligonucleotide Analysis Pack version | versionsuffix | toolchain --------|---------------|---------- ``2.21`` | ``_Linux-x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SOAPdenovo-Trans.md b/docs/version-specific/supported-software/s/SOAPdenovo-Trans.md index c5a00d3cc..9f3d43c7c 100644 --- a/docs/version-specific/supported-software/s/SOAPdenovo-Trans.md +++ b/docs/version-specific/supported-software/s/SOAPdenovo-Trans.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SOAPdenovo-Trans SOAPdenovo-Trans is a de novo transcriptome assembler basing on the SOAPdenovo framework, adapt to alternative splicing and different expression level among transcripts. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.4`` | ``intel/2017a`` ``1.0.5`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SOAPdenovo2.md b/docs/version-specific/supported-software/s/SOAPdenovo2.md index d03154186..a3743cd44 100644 --- a/docs/version-specific/supported-software/s/SOAPdenovo2.md +++ b/docs/version-specific/supported-software/s/SOAPdenovo2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SOAPdenovo2 SOAPdenovo is a novel short-read assembly method that can build a de novo draft assembly for human-sized genomes. The program is specially designed to assemble Illumina short reads. It creates new opportunities for building reference sequences and carrying out accurate analyses of unexplored genomes in a cost effective way. SOAPdenovo2 is the successor of SOAPdenovo. @@ -11,3 +15,6 @@ version | toolchain ``r241`` | ``foss/2018a`` ``r241`` | ``iccifort/2017.4.196-GCC-6.4.0-2.28`` ``r241`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SOAPfuse.md b/docs/version-specific/supported-software/s/SOAPfuse.md index 1d5767344..bd61cb95f 100644 --- a/docs/version-specific/supported-software/s/SOAPfuse.md +++ b/docs/version-specific/supported-software/s/SOAPfuse.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SOAPfuse SOAPfuse is an open source tool developed for genome-wide detection of fusion transcripts from paired-end RNA-Seq data. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.27`` | ``-Perl-5.24.0`` | ``foss/2016b`` ``1.27`` | ``-Perl-5.28.0`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SOCI.md b/docs/version-specific/supported-software/s/SOCI.md index ea57f4cc7..e6ac07f1d 100644 --- a/docs/version-specific/supported-software/s/SOCI.md +++ b/docs/version-specific/supported-software/s/SOCI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SOCI SOCI is a database access library for C++ that makes the illusion of embedding SQL queries in the regular C++ code, staying entirely within the Standard C++. @@ -13,3 +17,6 @@ version | toolchain ``4.0.3`` | ``GCC/11.3.0`` ``4.0.3`` | ``GCC/12.2.0`` ``4.0.3`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SPAdes.md b/docs/version-specific/supported-software/s/SPAdes.md index 7df131a2c..6a0f1c57c 100644 --- a/docs/version-specific/supported-software/s/SPAdes.md +++ b/docs/version-specific/supported-software/s/SPAdes.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SPAdes Genome assembler for single-cell and isolates data sets @@ -28,3 +32,6 @@ version | versionsuffix | toolchain ``3.15.5`` | | ``GCC/11.3.0`` ``3.9.0`` | | ``foss/2016a`` ``3.9.0`` | | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SPEI.md b/docs/version-specific/supported-software/s/SPEI.md index 5e7a7b8d2..994feef06 100644 --- a/docs/version-specific/supported-software/s/SPEI.md +++ b/docs/version-specific/supported-software/s/SPEI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SPEI A simple Python package to calculate drought indices for time series such as the SPI, SPEI and SGI. @@ -7,3 +11,6 @@ A simple Python package to calculate drought indices for time series such as the version | toolchain --------|---------- ``0.3.5`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SPLASH.md b/docs/version-specific/supported-software/s/SPLASH.md index bffa7c935..05123f07c 100644 --- a/docs/version-specific/supported-software/s/SPLASH.md +++ b/docs/version-specific/supported-software/s/SPLASH.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SPLASH SPLASH is a free and open source visualisation tool for Smoothed Particle Hydrodynamics (SPH) simulations. @@ -7,3 +11,6 @@ SPLASH is a free and open source visualisation tool for Smoothed Particle Hydro version | toolchain --------|---------- ``2.8.0`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SPM.md b/docs/version-specific/supported-software/s/SPM.md index bbbe7363a..bc5dd004c 100644 --- a/docs/version-specific/supported-software/s/SPM.md +++ b/docs/version-specific/supported-software/s/SPM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SPM SPM (Statistical Parametric Mapping) refers to the construction and assessment of spatially extended statistical processes used to test hypo- theses about functional imaging data. These ideas have been instantiated in software that is called SPM. The SPM software package has been designed for the analysis of brain imaging data sequences. The sequences can be a series of images from different cohorts, or time-series from the same subject. The current release is designed for the analysis of fMRI, PET, SPECT, EEG and MEG. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``12.5_r7771`` | ``-MATLAB-2021a`` | ``system`` ``12.5_r7771`` | ``-MATLAB-2021b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SPOOLES.md b/docs/version-specific/supported-software/s/SPOOLES.md index 31c28466e..0056d753c 100644 --- a/docs/version-specific/supported-software/s/SPOOLES.md +++ b/docs/version-specific/supported-software/s/SPOOLES.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SPOOLES SPOOLES is a library for solving sparse real and complex linear systems of equations, written in the C language using object oriented design. @@ -9,3 +13,6 @@ version | toolchain ``2.2`` | ``gompi/2021a`` ``2.2`` | ``gompi/2022b`` ``2.2`` | ``gompi/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SPOTPY.md b/docs/version-specific/supported-software/s/SPOTPY.md index 14322dbf6..9953cba8e 100644 --- a/docs/version-specific/supported-software/s/SPOTPY.md +++ b/docs/version-specific/supported-software/s/SPOTPY.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SPOTPY SPOTPY is a Python framework that enables the use of Computational optimization techniques for calibration, uncertainty and sensitivity analysis techniques of almost every (environmental-) model. @@ -7,3 +11,6 @@ SPOTPY is a Python framework that enables the use of Computational optimization version | toolchain --------|---------- ``1.5.14`` | ``intel/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SPRNG.md b/docs/version-specific/supported-software/s/SPRNG.md index 1cd1e6790..3c8a5acc7 100644 --- a/docs/version-specific/supported-software/s/SPRNG.md +++ b/docs/version-specific/supported-software/s/SPRNG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SPRNG Scalable Parallel Pseudo Random Number Generators Library @@ -7,3 +11,6 @@ Scalable Parallel Pseudo Random Number Generators Library version | toolchain --------|---------- ``2.0b`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SQLAlchemy.md b/docs/version-specific/supported-software/s/SQLAlchemy.md index a52376f54..10abd26cb 100644 --- a/docs/version-specific/supported-software/s/SQLAlchemy.md +++ b/docs/version-specific/supported-software/s/SQLAlchemy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SQLAlchemy SQLAlchemy is the Python SQL toolkit and Object Relational Mapper that gives application developers the full power and flexibility of SQL. SQLAlchemy provides a full suite of well known enterprise-level persistence patterns, designed for efficient and high-performing database access, adapted into a simple and Pythonic domain language. @@ -9,3 +13,6 @@ version | toolchain ``2.0.25`` | ``GCCcore/12.3.0`` ``2.0.29`` | ``GCCcore/12.2.0`` ``2.0.29`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SQLite.md b/docs/version-specific/supported-software/s/SQLite.md index 8bc459c48..ab95b1617 100644 --- a/docs/version-specific/supported-software/s/SQLite.md +++ b/docs/version-specific/supported-software/s/SQLite.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SQLite SQLite: SQL Database Engine in a C Library @@ -46,3 +50,6 @@ version | toolchain ``3.9.2`` | ``intel/2016a`` ``3.9.2`` | ``iomkl/2016.07`` ``3.9.2`` | ``iomkl/2016.09-GCC-4.9.3-2.25`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SRA-Toolkit.md b/docs/version-specific/supported-software/s/SRA-Toolkit.md index 1674ca4dd..0cdc43120 100644 --- a/docs/version-specific/supported-software/s/SRA-Toolkit.md +++ b/docs/version-specific/supported-software/s/SRA-Toolkit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SRA-Toolkit The SRA Toolkit, and the source-code SRA System Development Kit (SDK), will allow you to programmatically access data housed within SRA and convert it from the SRA format @@ -24,3 +28,6 @@ version | versionsuffix | toolchain ``3.0.3`` | | ``gompi/2022a`` ``3.0.5`` | | ``gompi/2021a`` ``3.0.5`` | | ``gompi/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SRPRISM.md b/docs/version-specific/supported-software/s/SRPRISM.md index 885098ebc..86b9f72b8 100644 --- a/docs/version-specific/supported-software/s/SRPRISM.md +++ b/docs/version-specific/supported-software/s/SRPRISM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SRPRISM Single Read Paired Read Indel Substitution Minimizer @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``3.0.0`` | | ``foss/2018b`` ``3.1.1`` | ``-Java-11`` | ``GCCcore/8.2.0`` ``3.1.2`` | | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SRST2.md b/docs/version-specific/supported-software/s/SRST2.md index 9107c000f..b88e910bf 100644 --- a/docs/version-specific/supported-software/s/SRST2.md +++ b/docs/version-specific/supported-software/s/SRST2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SRST2 Short Read Sequence Typing for Bacterial Pathogens @@ -7,3 +11,6 @@ Short Read Sequence Typing for Bacterial Pathogens version | versionsuffix | toolchain --------|---------------|---------- ``0.2.0-20210620`` | ``-Python-2.7.18`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SSAHA2.md b/docs/version-specific/supported-software/s/SSAHA2.md index 1ab4e98c3..1b84f37a8 100644 --- a/docs/version-specific/supported-software/s/SSAHA2.md +++ b/docs/version-specific/supported-software/s/SSAHA2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SSAHA2 SSAHA2 (Sequence Search and Alignment by Hashing Algorithm) is a pairwise sequence alignment program designed for the efficient mapping of sequencing reads onto genomic reference sequences. SSAHA2 reads of most sequencing platforms (ABI-Sanger, Roche 454, Illumina-Solexa) and a range of output formats (SAM, CIGAR, PSL etc.) are supported. A pile-up pipeline for analysis and genotype calling is available as a separate package. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.5.5`` | ``-i686`` | ``system`` ``2.5.5`` | ``-x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SSN.md b/docs/version-specific/supported-software/s/SSN.md index a1fd04ddd..f247a625a 100644 --- a/docs/version-specific/supported-software/s/SSN.md +++ b/docs/version-specific/supported-software/s/SSN.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SSN Spatial statistical modeling and prediction for data on stream networks, including models based on in-stream distance. Models are created using moving average constructions. Spatial linear models, including explanatory variables, can be fit with (restricted) maximum likelihood. Mapping and other graphical functions are included. @@ -7,3 +11,6 @@ Spatial statistical modeling and prediction for data on stream networks, includi version | versionsuffix | toolchain --------|---------------|---------- ``1.1.14`` | ``-R-3.6.0`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SSPACE_Basic.md b/docs/version-specific/supported-software/s/SSPACE_Basic.md index d582947f3..e81e1c9b0 100644 --- a/docs/version-specific/supported-software/s/SSPACE_Basic.md +++ b/docs/version-specific/supported-software/s/SSPACE_Basic.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SSPACE_Basic SSPACE Basic, SSAKE-based Scaffolding of Pre-Assembled Contigs after Extension @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.1.1`` | ``-Python-2.7.18`` | ``GCC/10.2.0`` ``2.1.1`` | ``-Perl-5.24.1`` | ``intel/2017a`` ``2.1.1`` | ``-Perl-5.26.0`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SSW.md b/docs/version-specific/supported-software/s/SSW.md index efac3a3cc..3a7e112d1 100644 --- a/docs/version-specific/supported-software/s/SSW.md +++ b/docs/version-specific/supported-software/s/SSW.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SSW SSW is a fast implementation of the Smith-Waterman algorithm, which uses the Single-Instruction Multiple-Data (SIMD) instructions to parallelize the algorithm at the instruction level. SSW library provides an API that can be flexibly used by programs written in C, C++ and other languages. We also provide a software that can do protein and genome alignment directly. Current version of our implementation is ~50 times faster than an ordinary Smith-Waterman. It can return the Smith-Waterman score, alignment location and traceback path (cigar) of the optimal alignment accurately; and return the sub-optimal alignment score and location heuristically. @@ -12,3 +16,6 @@ version | toolchain ``1.1`` | ``GCCcore/12.3.0`` ``1.1`` | ``GCCcore/9.3.0`` ``1.2.4`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/STACEY.md b/docs/version-specific/supported-software/s/STACEY.md index cda679dab..c1db3f6f9 100644 --- a/docs/version-specific/supported-software/s/STACEY.md +++ b/docs/version-specific/supported-software/s/STACEY.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # STACEY The BEAST2 package STACEY can be used for species delimitation and species tree estimation, based on the multispecies coalescent model. @@ -7,3 +11,6 @@ The BEAST2 package STACEY can be used for species delimitation and species tree version | toolchain --------|---------- ``1.2.5`` | ``GCC/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/STAMP.md b/docs/version-specific/supported-software/s/STAMP.md index d9b880a62..193d0f66f 100644 --- a/docs/version-specific/supported-software/s/STAMP.md +++ b/docs/version-specific/supported-software/s/STAMP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # STAMP STAMP is a tool for characterizing similarities between transcription factor binding motifs @@ -9,3 +13,6 @@ version | toolchain ``1.2`` | ``intel/2016a`` ``1.3`` | ``intel/2016a`` ``1.3`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/STAR-CCM+.md b/docs/version-specific/supported-software/s/STAR-CCM+.md index eb8b155bc..62ac6f1f7 100644 --- a/docs/version-specific/supported-software/s/STAR-CCM+.md +++ b/docs/version-specific/supported-software/s/STAR-CCM+.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # STAR-CCM+ STAR-CCM+ is a complete multidisciplinary platform for the simulation of products and designs operating under real-world conditions. @@ -21,3 +25,6 @@ version | versionsuffix | toolchain ``2302`` | | ``system`` ``2310`` | ``-r8`` | ``system`` ``2310`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/STAR-Fusion.md b/docs/version-specific/supported-software/s/STAR-Fusion.md index 544ab2f21..775977e52 100644 --- a/docs/version-specific/supported-software/s/STAR-Fusion.md +++ b/docs/version-specific/supported-software/s/STAR-Fusion.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # STAR-Fusion STAR-Fusion uses the STAR aligner to identify candidate fusion transcripts supported by Illumina reads. STAR-Fusion further processes the output generated by the STAR aligner to map junction reads and spanning reads to a reference annotation set. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.5.0`` | ``-Perl-5.28.0`` | ``foss/2018b`` ``1.6.0`` | ``-Perl-5.28.1-Python-3.7.2`` | ``GCC/8.2.0-2.31.1`` ``1.8.1`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/STAR.md b/docs/version-specific/supported-software/s/STAR.md index db826fe24..4bb02168d 100644 --- a/docs/version-specific/supported-software/s/STAR.md +++ b/docs/version-specific/supported-software/s/STAR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # STAR STAR aligns RNA-seq reads to a reference genome using uncompressed suffix arrays. @@ -44,3 +48,6 @@ version | toolchain ``2.7.8a`` | ``GCC/10.2.0`` ``2.7.9a`` | ``GCC/10.3.0`` ``2.7.9a`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/STEAK.md b/docs/version-specific/supported-software/s/STEAK.md index 5d9dc81a9..b842c0f72 100644 --- a/docs/version-specific/supported-software/s/STEAK.md +++ b/docs/version-specific/supported-software/s/STEAK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # STEAK Detects integrations of any sort in high-throughput sequencing (HTS) data. STEAK was built for validating and discovering transposable element (TE) and retroviral integrations in a variety of HTS data. The software performs on both single-end (SE) and paired-end ( PE) libraries and on a variety of HTS sequencing strategies. It can be applied to a broad range of research interests and clinical uses such as population genetic studies and detecting polymorphic integrations. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2019.09.12`` | ``-Python-2.7.16`` | ``foss/2019b`` ``2019.09.12`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/STIR.md b/docs/version-specific/supported-software/s/STIR.md index fc2486541..450c1f886 100644 --- a/docs/version-specific/supported-software/s/STIR.md +++ b/docs/version-specific/supported-software/s/STIR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # STIR Software for Tomographic Image Reconstruction @@ -7,3 +11,6 @@ Software for Tomographic Image Reconstruction version | toolchain --------|---------- ``3.0`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/STREAM.md b/docs/version-specific/supported-software/s/STREAM.md index ea705a814..69e77dcad 100644 --- a/docs/version-specific/supported-software/s/STREAM.md +++ b/docs/version-specific/supported-software/s/STREAM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # STREAM The STREAM benchmark is a simple synthetic benchmark program that measures sustainable memory bandwidth (in MB/s) and the corresponding computation rate for simple vector kernels. @@ -14,3 +18,6 @@ version | toolchain ``5.10`` | ``intel/2016b`` ``5.10`` | ``intel/2018b`` ``5.10`` | ``intel-compilers/2022.2.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/STRUMPACK.md b/docs/version-specific/supported-software/s/STRUMPACK.md index 5d889e935..889469c55 100644 --- a/docs/version-specific/supported-software/s/STRUMPACK.md +++ b/docs/version-specific/supported-software/s/STRUMPACK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # STRUMPACK STRUMPACK - STRUctured Matrix PACKage - Fast linear solvers and preconditioner for both dense and sparse systems using low-rank structured factorization with randomized sampling. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``6.1.0`` | ``foss/2020b`` ``6.1.0`` | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/STRique.md b/docs/version-specific/supported-software/s/STRique.md index 6327004c7..bd19b2bb8 100644 --- a/docs/version-specific/supported-software/s/STRique.md +++ b/docs/version-specific/supported-software/s/STRique.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # STRique STRique is a python package to analyze repeat expansion and methylation states of short tandem repeats (STR) in Oxford Nanopore Technology (ONT) long read sequencing data. @@ -7,3 +11,6 @@ STRique is a python package to analyze repeat expansion and methylation states o version | toolchain --------|---------- ``0.4.2`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SUMACLUST.md b/docs/version-specific/supported-software/s/SUMACLUST.md index 14de79c38..7e1512276 100644 --- a/docs/version-specific/supported-software/s/SUMACLUST.md +++ b/docs/version-specific/supported-software/s/SUMACLUST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SUMACLUST SUMATRA and SUMACLUST: fast and exact comparison and clustering of sequences. @@ -7,3 +11,6 @@ SUMATRA and SUMACLUST: fast and exact comparison and clustering of sequences. version | toolchain --------|---------- ``1.0.20`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SUMATRA.md b/docs/version-specific/supported-software/s/SUMATRA.md index 154d9a5e5..4130ba6b3 100644 --- a/docs/version-specific/supported-software/s/SUMATRA.md +++ b/docs/version-specific/supported-software/s/SUMATRA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SUMATRA SUMATRA and SUMACLUST: fast and exact comparison and clustering of sequences. @@ -7,3 +11,6 @@ SUMATRA and SUMACLUST: fast and exact comparison and clustering of sequences. version | toolchain --------|---------- ``1.0.20`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SUMO.md b/docs/version-specific/supported-software/s/SUMO.md index 15e41dd4d..82e8a861b 100644 --- a/docs/version-specific/supported-software/s/SUMO.md +++ b/docs/version-specific/supported-software/s/SUMO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SUMO Simulation of Urban MObility" (SUMO) is an open source, highly portable, microscopic and continuous traffic simulation package designed to handle large networks. It allows for intermodal simulation including pedestrians and comes with a large set of tools for scenario creation. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.14.1`` | | ``foss/2021b`` ``1.3.1`` | ``-Python-3.7.4`` | ``GCCcore/8.3.0`` ``1.7.0`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SUNDIALS.md b/docs/version-specific/supported-software/s/SUNDIALS.md index 28a798b99..164efbec5 100644 --- a/docs/version-specific/supported-software/s/SUNDIALS.md +++ b/docs/version-specific/supported-software/s/SUNDIALS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SUNDIALS SUNDIALS: SUite of Nonlinear and DIfferential/ALgebraic Equation Solvers @@ -29,3 +33,6 @@ version | versionsuffix | toolchain ``6.6.0`` | | ``foss/2022b`` ``6.6.0`` | ``-CUDA-12.1.1`` | ``foss/2023a`` ``6.6.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SUPPA.md b/docs/version-specific/supported-software/s/SUPPA.md index a07efbfd6..b2977f873 100644 --- a/docs/version-specific/supported-software/s/SUPPA.md +++ b/docs/version-specific/supported-software/s/SUPPA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SUPPA Fast, accurate, and uncertainty-aware differential splicing analysis across multiple conditions. @@ -7,3 +11,6 @@ Fast, accurate, and uncertainty-aware differential splicing analysis across mul version | toolchain --------|---------- ``2.3-20231005`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SURVIVOR.md b/docs/version-specific/supported-software/s/SURVIVOR.md index 9e874096f..77d00cee7 100644 --- a/docs/version-specific/supported-software/s/SURVIVOR.md +++ b/docs/version-specific/supported-software/s/SURVIVOR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SURVIVOR Toolset for SV simulation, comparison and filtering @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.7-19-ged1ca51`` | ``GCC/11.2.0`` ``1.0.7-19-ged1ca51`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SVDetect.md b/docs/version-specific/supported-software/s/SVDetect.md index 18f6e6b13..a1b698c7f 100644 --- a/docs/version-specific/supported-software/s/SVDetect.md +++ b/docs/version-specific/supported-software/s/SVDetect.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SVDetect SVDetect is a application for the isolation and the type prediction of intra- and inter-chromosomal rearrangements from paired-end/mate-pair sequencing data provided by the high-throughput sequencing technologies. This tool aims to identifying structural variations with both clustering and sliding-window strategies, and helping in their visualization at the genome scale. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.8b`` | ``-Perl-5.26.0`` | ``GCC/6.4.0-2.28`` ``0.8b`` | ``-Perl-5.26.0`` | ``iccifort/2017.4.196-GCC-6.4.0-2.28`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SVDquest.md b/docs/version-specific/supported-software/s/SVDquest.md index 99b6ef8b9..ac41f7ee0 100644 --- a/docs/version-specific/supported-software/s/SVDquest.md +++ b/docs/version-specific/supported-software/s/SVDquest.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SVDquest SVDquartets-based species trees @@ -7,3 +11,6 @@ SVDquartets-based species trees version | toolchain --------|---------- ``20190627`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SVG.md b/docs/version-specific/supported-software/s/SVG.md index 4fe948fe6..34e34e0ec 100644 --- a/docs/version-specific/supported-software/s/SVG.md +++ b/docs/version-specific/supported-software/s/SVG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SVG Perl binding for SVG @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.87`` | | ``GCC/11.2.0`` ``2.87`` | | ``GCC/11.3.0`` ``2.87`` | | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SVIM.md b/docs/version-specific/supported-software/s/SVIM.md index ccaa94ca8..52c2017a3 100644 --- a/docs/version-specific/supported-software/s/SVIM.md +++ b/docs/version-specific/supported-software/s/SVIM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SVIM SVIM (pronounced swim) is a structural variant caller for third-generation sequencing reads. It is able to detect and classify the following six classes of structural variation: deletions, insertions, inversions, tandem duplications, interspersed duplications and translocations. @@ -7,3 +11,6 @@ SVIM (pronounced swim) is a structural variant caller for third-generation seque version | toolchain --------|---------- ``2.0.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SVclone.md b/docs/version-specific/supported-software/s/SVclone.md index 9a444e36f..236cc9aeb 100644 --- a/docs/version-specific/supported-software/s/SVclone.md +++ b/docs/version-specific/supported-software/s/SVclone.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SVclone Cluster structural variants of similar cancer cell fraction (CCF). @@ -7,3 +11,6 @@ Cluster structural variants of similar cancer cell fraction (CCF). version | toolchain --------|---------- ``1.1.2`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SWASH.md b/docs/version-specific/supported-software/s/SWASH.md index 31b17ad9c..e155f3ed0 100644 --- a/docs/version-specific/supported-software/s/SWASH.md +++ b/docs/version-specific/supported-software/s/SWASH.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SWASH SWASH is a general-purpose numerical tool for simulating unsteady, non-hydrostatic, free-surface, rotational flow and transport phenomena in coastal waters as driven by waves, tides, buoyancy and wind forces. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``3.14`` | ``-mpi`` | ``intel/2016b`` ``3.14`` | ``-mpi`` | ``intel/2017a`` ``4.01`` | ``-mpi`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SWAT+.md b/docs/version-specific/supported-software/s/SWAT+.md index 2f148c4d3..27e37032a 100644 --- a/docs/version-specific/supported-software/s/SWAT+.md +++ b/docs/version-specific/supported-software/s/SWAT+.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SWAT+ The Soil & Water Assessment Tool (SWAT) is a small watershed to river basin-scale model used to simulate the quality and quantity of surface and ground water and predict the environmental impact of land use, land management practices, and climate change. In order to face present and future challenges in water resources modeling SWAT code has undergone major modifications over the past few years, resulting in SWAT+, a completely revised version of the model. SWAT+ provides a more flexible spatial representation of interactions and processes within a watershed. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``60.4.1`` | ``GCC/9.3.0`` ``60.5.1`` | ``iccifort/2020.4.304`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SWIG.md b/docs/version-specific/supported-software/s/SWIG.md index c8bdd24d7..90ebca05d 100644 --- a/docs/version-specific/supported-software/s/SWIG.md +++ b/docs/version-specific/supported-software/s/SWIG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SWIG SWIG is a software development tool that connects programs written in C and C++ with a variety of high-level programming languages. @@ -47,3 +51,6 @@ version | versionsuffix | toolchain ``4.1.1`` | | ``GCCcore/12.3.0`` ``4.1.1`` | | ``GCCcore/13.2.0`` ``4.2.1`` | | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SWIPE.md b/docs/version-specific/supported-software/s/SWIPE.md index f02b837f1..6edff1c5a 100644 --- a/docs/version-specific/supported-software/s/SWIPE.md +++ b/docs/version-specific/supported-software/s/SWIPE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SWIPE Smith-Waterman database searches with inter-sequence SIMD parallelisation @@ -7,3 +11,6 @@ Smith-Waterman database searches with inter-sequence SIMD parallelisation version | toolchain --------|---------- ``2.1.1`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SYMMETRICA.md b/docs/version-specific/supported-software/s/SYMMETRICA.md index 9704a75f8..d5487f98e 100644 --- a/docs/version-specific/supported-software/s/SYMMETRICA.md +++ b/docs/version-specific/supported-software/s/SYMMETRICA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SYMMETRICA Symmetrica is a Collection of C routines for representation theory. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.0`` | ``GCCcore/11.3.0`` ``2.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SYMPHONY.md b/docs/version-specific/supported-software/s/SYMPHONY.md index 50b6dc930..83dff8b30 100644 --- a/docs/version-specific/supported-software/s/SYMPHONY.md +++ b/docs/version-specific/supported-software/s/SYMPHONY.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SYMPHONY SYMPHONY is an open-source solver for mixed-integer linear programs (MILPs) written in C. @@ -7,3 +11,6 @@ SYMPHONY is an open-source solver for mixed-integer linear programs (MILPs) writ version | toolchain --------|---------- ``5.6.16`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Sabre.md b/docs/version-specific/supported-software/s/Sabre.md index 7e9817877..1bb09f7e9 100644 --- a/docs/version-specific/supported-software/s/Sabre.md +++ b/docs/version-specific/supported-software/s/Sabre.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Sabre Sabre is a tool that will demultiplex barcoded reads into separate files. It will work on both single-end and paired-end data in fastq format. It simply compares the provided barcodes with each read and separates the read into its appropriate barcode file, after stripping the barcode from the read (and also stripping the quality values of the barcode bases). @@ -7,3 +11,6 @@ Sabre is a tool that will demultiplex barcoded reads into separate files. It wi version | toolchain --------|---------- ``2013-09-28`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Safetensors.md b/docs/version-specific/supported-software/s/Safetensors.md index 15e60f0d2..681e1b9c0 100644 --- a/docs/version-specific/supported-software/s/Safetensors.md +++ b/docs/version-specific/supported-software/s/Safetensors.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Safetensors Safetensors is a new simple format for storing tensors safely (as opposed to pickle) and that is still fast (zero-copy). Safetensors is really fast. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.3.1`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.3.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Sailfish.md b/docs/version-specific/supported-software/s/Sailfish.md index 5158a2d54..48d94f108 100644 --- a/docs/version-specific/supported-software/s/Sailfish.md +++ b/docs/version-specific/supported-software/s/Sailfish.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Sailfish Sailfish is a software tool that implements a novel, alignment-free algorithm for the estimation of isoform abundances directly from a set of reference sequences and RNA-seq reads. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.10.1`` | ``-Python-2.7.12`` | ``foss/2016b`` ``0.10.1`` | | ``gompi/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Salmon.md b/docs/version-specific/supported-software/s/Salmon.md index c1f77744a..36be7b9fb 100644 --- a/docs/version-specific/supported-software/s/Salmon.md +++ b/docs/version-specific/supported-software/s/Salmon.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Salmon Salmon is a wicked-fast program to produce a highly-accurate, transcript-level quantification estimates from RNA-seq data. @@ -21,3 +25,6 @@ version | versionsuffix | toolchain ``1.4.0`` | | ``GCC/11.2.0`` ``1.4.0`` | | ``gompi/2020b`` ``1.9.0`` | | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Sambamba.md b/docs/version-specific/supported-software/s/Sambamba.md index 45a684ce8..7c56dba3f 100644 --- a/docs/version-specific/supported-software/s/Sambamba.md +++ b/docs/version-specific/supported-software/s/Sambamba.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Sambamba Sambamba is a high performance modern robust and fast tool (and library), written in the D programming language, for working with SAM and BAM files. Current functionality is an important subset of samtools functionality, including view, index, sort, markdup, and depth @@ -11,3 +15,6 @@ version | toolchain ``0.8.0`` | ``GCC/10.2.0`` ``0.8.2`` | ``GCC/10.3.0`` ``1.0.1`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Samcef.md b/docs/version-specific/supported-software/s/Samcef.md index 69918d86d..c1bc71f50 100644 --- a/docs/version-specific/supported-software/s/Samcef.md +++ b/docs/version-specific/supported-software/s/Samcef.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Samcef FEM solver solution suite for basic linear structures to advanced, flexible nonlinear mechanisms and thermal applications. @@ -7,3 +11,6 @@ FEM solver solution suite for basic linear structures to advanced, flexible nonl version | toolchain --------|---------- ``17.0-03`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Satsuma2.md b/docs/version-specific/supported-software/s/Satsuma2.md index 3df338c8b..73573f66a 100644 --- a/docs/version-specific/supported-software/s/Satsuma2.md +++ b/docs/version-specific/supported-software/s/Satsuma2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Satsuma2 Satsuma2 is an optimised version of Satsuma, a tool to reliably align large and complex DNA sequences providing maximum sensitivity (to find all there is to find), specificity (to only find real homology) and speed (to accommodate the billions of base pairs in vertebrate genomes). @@ -7,3 +11,6 @@ Satsuma2 is an optimised version of Satsuma, a tool to reliably align large and version | toolchain --------|---------- ``20220304`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Saxon-HE.md b/docs/version-specific/supported-software/s/Saxon-HE.md index 09d593995..b23f46a9e 100644 --- a/docs/version-specific/supported-software/s/Saxon-HE.md +++ b/docs/version-specific/supported-software/s/Saxon-HE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Saxon-HE Open Source SAXON XSLT processor developed by Saxonica Limited. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``9.7.0.21`` | ``-Java-1.8.0_162`` | ``system`` ``9.7.0.4`` | ``-Java-1.7.0_79`` | ``system`` ``9.9.1.7`` | ``-Java-13`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/ScaFaCoS.md b/docs/version-specific/supported-software/s/ScaFaCoS.md index 14fe8f047..4e37ccc36 100644 --- a/docs/version-specific/supported-software/s/ScaFaCoS.md +++ b/docs/version-specific/supported-software/s/ScaFaCoS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ScaFaCoS ScaFaCoS is a library of scalable fast coulomb solvers. @@ -14,3 +18,6 @@ version | toolchain ``1.0.4`` | ``foss/2022a`` ``1.0.4`` | ``foss/2022b`` ``1.0.4`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/ScaLAPACK.md b/docs/version-specific/supported-software/s/ScaLAPACK.md index c3bcc62cd..01222f969 100644 --- a/docs/version-specific/supported-software/s/ScaLAPACK.md +++ b/docs/version-specific/supported-software/s/ScaLAPACK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ScaLAPACK The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines redesigned for distributed memory MIMD parallel computers. @@ -53,3 +57,6 @@ version | versionsuffix | toolchain ``2.2.0`` | ``-fb`` | ``gompi/2023b`` ``2.2.0`` | ``-fb`` | ``gompi/2024.05`` ``2.2.0`` | ``-fb`` | ``nvompi/2022.07`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Scalasca.md b/docs/version-specific/supported-software/s/Scalasca.md index 17e358898..a8f174bdc 100644 --- a/docs/version-specific/supported-software/s/Scalasca.md +++ b/docs/version-specific/supported-software/s/Scalasca.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Scalasca Scalasca is a software tool that supports the performance optimization of parallel programs by measuring and analyzing their runtime behavior. The analysis identifies potential performance bottlenecks -- in particular those concerning communication and synchronization -- and offers guidance in exploring their causes. @@ -12,3 +16,6 @@ version | toolchain ``2.6`` | ``gompi/2021a`` ``2.6`` | ``gompic/2020b`` ``2.6.1`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Scalene.md b/docs/version-specific/supported-software/s/Scalene.md index 50a697007..f43881bf6 100644 --- a/docs/version-specific/supported-software/s/Scalene.md +++ b/docs/version-specific/supported-software/s/Scalene.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Scalene Scalene is a high-performance CPU, GPU and memory profiler for Python that does a number of things that other Python profilers do not and cannot do. It runs orders of magnitude faster than other profilers while delivering far more detailed information. @@ -11,3 +15,6 @@ version | toolchain ``1.5.26`` | ``GCCcore/12.2.0`` ``1.5.26`` | ``GCCcore/12.3.0`` ``1.5.35`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Schrodinger.md b/docs/version-specific/supported-software/s/Schrodinger.md index d4398ec3d..aebebec5d 100644 --- a/docs/version-specific/supported-software/s/Schrodinger.md +++ b/docs/version-specific/supported-software/s/Schrodinger.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Schrodinger Schrodinger aims to provide integrated software solutions and services that truly meet its customers needs. We want to empower researchers around the world to achieve their goals of improving human health and quality of life through advanced computational techniques that transform the way chemists design compounds and materials. @@ -11,3 +15,6 @@ version | toolchain ``2022-1`` | ``system`` ``2022-2`` | ``system`` ``2022-3`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SciPy-bundle.md b/docs/version-specific/supported-software/s/SciPy-bundle.md index 73c4299e3..4920533bb 100644 --- a/docs/version-specific/supported-software/s/SciPy-bundle.md +++ b/docs/version-specific/supported-software/s/SciPy-bundle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SciPy-bundle Bundle of Python packages for scientific software @@ -45,3 +49,6 @@ version | versionsuffix | toolchain ``2023.07`` | | ``iimkl/2023a`` ``2023.11`` | | ``gfbf/2023.09`` ``2023.11`` | | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SciTools-Iris.md b/docs/version-specific/supported-software/s/SciTools-Iris.md index 9172e3686..ef7d4b38a 100644 --- a/docs/version-specific/supported-software/s/SciTools-Iris.md +++ b/docs/version-specific/supported-software/s/SciTools-Iris.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SciTools-Iris A powerful, format-agnostic, community-driven Python package for analysing and visualising Earth science data. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.2.1`` | ``foss/2022a`` ``3.9.0`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/ScientificPython.md b/docs/version-specific/supported-software/s/ScientificPython.md index 7b4f0a468..eac281891 100644 --- a/docs/version-specific/supported-software/s/ScientificPython.md +++ b/docs/version-specific/supported-software/s/ScientificPython.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ScientificPython ScientificPython is a collection of Python modules for scientific computing. It contains support for geometry, mathematical functions, statistics, physical units, IO, visualization, and parallelization. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.9.4`` | ``-Python-2.7.11`` | ``foss/2016a`` ``2.9.4`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Scoary.md b/docs/version-specific/supported-software/s/Scoary.md index 9f2fab709..cda399c45 100644 --- a/docs/version-specific/supported-software/s/Scoary.md +++ b/docs/version-specific/supported-software/s/Scoary.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Scoary Microbial pan-GWAS using the output from Roary @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.6.16`` | | ``foss/2021a`` ``1.6.16`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Score-P.md b/docs/version-specific/supported-software/s/Score-P.md index 5d27cea03..582bd2525 100644 --- a/docs/version-specific/supported-software/s/Score-P.md +++ b/docs/version-specific/supported-software/s/Score-P.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Score-P The Score-P measurement infrastructure is a highly scalable and easy-to-use tool suite for profiling, event tracing, and online analysis of HPC applications. @@ -28,3 +32,6 @@ version | versionsuffix | toolchain ``8.3`` | | ``gompi/2022b`` ``8.4`` | ``-CUDA-12.4.0`` | ``gompi/2023b`` ``8.4`` | | ``gompi/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Scrappie.md b/docs/version-specific/supported-software/s/Scrappie.md index 50e9b5686..1cf7a375f 100644 --- a/docs/version-specific/supported-software/s/Scrappie.md +++ b/docs/version-specific/supported-software/s/Scrappie.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Scrappie Scrappie is a technology demonstrator for the Oxford Nanopore Research Algorithms group. @@ -7,3 +11,6 @@ Scrappie is a technology demonstrator for the Oxford Nanopore Research Algorithm version | toolchain --------|---------- ``1.3.2`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Scythe.md b/docs/version-specific/supported-software/s/Scythe.md index 9ff31e4b2..f8d15d859 100644 --- a/docs/version-specific/supported-software/s/Scythe.md +++ b/docs/version-specific/supported-software/s/Scythe.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Scythe Scythe uses a Naive Bayesian approach to classify contaminant substrings in sequence reads. It considers quality information, which can make it robust in picking out 3'-end adapters, which often include poor quality bases. @@ -7,3 +11,6 @@ Scythe uses a Naive Bayesian approach to classify contaminant substrings in seq version | toolchain --------|---------- ``0.994`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SeaView.md b/docs/version-specific/supported-software/s/SeaView.md index d9033e47e..a188730b4 100644 --- a/docs/version-specific/supported-software/s/SeaView.md +++ b/docs/version-specific/supported-software/s/SeaView.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SeaView SeaView is a multiplatform, graphical user interface for multiple sequence alignment and molecular phylogeny. @@ -7,3 +11,6 @@ SeaView is a multiplatform, graphical user interface for multiple sequence align version | toolchain --------|---------- ``5.0.5`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Seaborn.md b/docs/version-specific/supported-software/s/Seaborn.md index b9470c5b6..76b3d930d 100644 --- a/docs/version-specific/supported-software/s/Seaborn.md +++ b/docs/version-specific/supported-software/s/Seaborn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Seaborn Seaborn is a Python visualization library based on matplotlib. It provides a high-level interface for drawing attractive statistical graphics. @@ -44,3 +48,6 @@ version | versionsuffix | toolchain ``0.9.0`` | ``-Python-3.6.3`` | ``intelcuda/2017b`` ``0.9.1`` | ``-Python-2.7.16`` | ``foss/2019b`` ``0.9.1`` | ``-Python-2.7.18`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SearchGUI.md b/docs/version-specific/supported-software/s/SearchGUI.md index 8c3b464e7..4a5743401 100644 --- a/docs/version-specific/supported-software/s/SearchGUI.md +++ b/docs/version-specific/supported-software/s/SearchGUI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SearchGUI SearchGUI is a user-friendly open-source graphical user interface for configuring and running proteomics identification search engines and de novo sequencing algorithms, currently supporting X! Tandem, MS-GF+, MS Amanda, MyriMatch, Comet, Tide, Andromeda, OMSSA, Novor and DirecTag. @@ -7,3 +11,6 @@ SearchGUI is a user-friendly open-source graphical user interface for configurin version | versionsuffix | toolchain --------|---------------|---------- ``3.3.3`` | ``-Java-1.8.0_152`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Seeder.md b/docs/version-specific/supported-software/s/Seeder.md index caa538332..ee2a34139 100644 --- a/docs/version-specific/supported-software/s/Seeder.md +++ b/docs/version-specific/supported-software/s/Seeder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Seeder Seeder is a framework for DNA motif discovery. @@ -7,3 +11,6 @@ Seeder is a framework for DNA motif discovery. version | versionsuffix | toolchain --------|---------------|---------- ``0.01`` | ``-Perl-5.28.1`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SeisSol.md b/docs/version-specific/supported-software/s/SeisSol.md index f207f2ded..b481f61a1 100644 --- a/docs/version-specific/supported-software/s/SeisSol.md +++ b/docs/version-specific/supported-software/s/SeisSol.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SeisSol SeisSol is a software package for simulating wave propagation and dynamic rupture based on the arbitrary high-order accurate derivative discontinuous Galerkin method (ADER-DG). @@ -7,3 +11,6 @@ SeisSol is a software package for simulating wave propagation and dynamic ruptur version | versionsuffix | toolchain --------|---------------|---------- ``201703`` | ``-Python-2.7.15`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SelEstim.md b/docs/version-specific/supported-software/s/SelEstim.md index 0a7b6c557..ad4424512 100644 --- a/docs/version-specific/supported-software/s/SelEstim.md +++ b/docs/version-specific/supported-software/s/SelEstim.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SelEstim SelEstim is aimed at distinguishing neutral from selected polymorphisms and estimate the intensity of selection at the latter. The SelEstim model accounts explicitly for positive selection, and it is assumed that all marker loci in the dataset are responding to selection, to some extent @@ -7,3 +11,6 @@ SelEstim is aimed at distinguishing neutral from selected polymorphisms and esti version | versionsuffix | toolchain --------|---------------|---------- ``1.1.4`` | ``-Linux-64bits`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SemiBin.md b/docs/version-specific/supported-software/s/SemiBin.md index 5986e87fd..cb2a3522b 100644 --- a/docs/version-specific/supported-software/s/SemiBin.md +++ b/docs/version-specific/supported-software/s/SemiBin.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SemiBin SemiBin: Metagenomic Binning Using Siamese Neural Networks for short and long reads @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.0.2`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``2.0.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Sentence-Transformers.md b/docs/version-specific/supported-software/s/Sentence-Transformers.md index e4e8f55b7..6e1fcd001 100644 --- a/docs/version-specific/supported-software/s/Sentence-Transformers.md +++ b/docs/version-specific/supported-software/s/Sentence-Transformers.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Sentence-Transformers Sentence Transformers provides an easy method to compute dense vector representations for sentences, paragraphs, and images @@ -7,3 +11,6 @@ Sentence Transformers provides an easy method to compute dense vector representa version | toolchain --------|---------- ``2.2.2`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SentencePiece.md b/docs/version-specific/supported-software/s/SentencePiece.md index baaccda09..49588abee 100644 --- a/docs/version-specific/supported-software/s/SentencePiece.md +++ b/docs/version-specific/supported-software/s/SentencePiece.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SentencePiece Unsupervised text tokenizer for Neural Network-based text generation. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``0.1.97`` | | ``GCC/11.3.0`` ``0.1.99`` | | ``GCC/12.2.0`` ``0.2.0`` | | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Seq-Gen.md b/docs/version-specific/supported-software/s/Seq-Gen.md index 120d7e9d0..6a53f9cba 100644 --- a/docs/version-specific/supported-software/s/Seq-Gen.md +++ b/docs/version-specific/supported-software/s/Seq-Gen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Seq-Gen Seq-Gen is a program that will simulate the evolution of nucleotide or amino acid sequences along a phylogeny, using common models of the substitution process. @@ -7,3 +11,6 @@ Seq-Gen is a program that will simulate the evolution of nucleotide or amino aci version | toolchain --------|---------- ``1.3.4`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SeqAn.md b/docs/version-specific/supported-software/s/SeqAn.md index 4cefcac49..4ccf91021 100644 --- a/docs/version-specific/supported-software/s/SeqAn.md +++ b/docs/version-specific/supported-software/s/SeqAn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SeqAn SeqAn is an open source C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``2.4.0`` | | ``GCCcore/9.3.0`` ``2.4.0`` | | ``foss/2018b`` ``2.4.0`` | | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SeqAn3.md b/docs/version-specific/supported-software/s/SeqAn3.md index e37f0c1b6..b04025063 100644 --- a/docs/version-specific/supported-software/s/SeqAn3.md +++ b/docs/version-specific/supported-software/s/SeqAn3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SeqAn3 SeqAn is an open source C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data. Our library applies a unique generic design that guarantees high performance, generality, extensibility, and integration with other libraries. SeqAn is easy to use and simplifies the development of new software tools with a minimal loss of performance. @@ -7,3 +11,6 @@ SeqAn is an open source C++ library of efficient algorithms and data structure version | toolchain --------|---------- ``3.0.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SeqKit.md b/docs/version-specific/supported-software/s/SeqKit.md index 1c92b4739..bd7c5bb83 100644 --- a/docs/version-specific/supported-software/s/SeqKit.md +++ b/docs/version-specific/supported-software/s/SeqKit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SeqKit SeqKit - a cross-platform and ultrafast toolkit for FASTA/Q file manipulation @@ -11,3 +15,6 @@ version | toolchain ``2.1.0`` | ``system`` ``2.2.0`` | ``system`` ``2.3.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SeqLib.md b/docs/version-specific/supported-software/s/SeqLib.md index d5634d5eb..0693e3fb8 100644 --- a/docs/version-specific/supported-software/s/SeqLib.md +++ b/docs/version-specific/supported-software/s/SeqLib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SeqLib C++ interface to HTSlib, BWA-MEM and Fermi. @@ -11,3 +15,6 @@ version | toolchain ``1.2.0`` | ``GCC/11.2.0`` ``1.2.0`` | ``GCC/12.3.0`` ``1.2.0`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SeqPrep.md b/docs/version-specific/supported-software/s/SeqPrep.md index 9df8cab7b..284e4d814 100644 --- a/docs/version-specific/supported-software/s/SeqPrep.md +++ b/docs/version-specific/supported-software/s/SeqPrep.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SeqPrep Tool for stripping adaptors and/or merging paired reads with overlap into single reads. @@ -7,3 +11,6 @@ Tool for stripping adaptors and/or merging paired reads with overlap into single version | toolchain --------|---------- ``1.3.2`` | ``GCCcore/7.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Seqmagick.md b/docs/version-specific/supported-software/s/Seqmagick.md index d826b487e..8583f2228 100644 --- a/docs/version-specific/supported-software/s/Seqmagick.md +++ b/docs/version-specific/supported-software/s/Seqmagick.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Seqmagick We often have to convert between sequence formats and do little tasks on them, and it's not worth writing scripts for that. Seqmagick is a kickass little utility built in the spirit of imagemagick to expose the file format conversion in Biopython in a convenient way. Instead of having a big mess of scripts, there is one that takes arguments. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.6.1`` | ``-Python-2.7.11`` | ``foss/2016a`` ``0.6.2`` | ``-Python-2.7.15`` | ``foss/2018b`` ``0.8.6`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Serf.md b/docs/version-specific/supported-software/s/Serf.md index 19808a2fd..99f8a3270 100644 --- a/docs/version-specific/supported-software/s/Serf.md +++ b/docs/version-specific/supported-software/s/Serf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Serf The serf library is a high performance C-based HTTP client library built upon the Apache Portable Runtime (APR) library @@ -16,3 +20,6 @@ version | toolchain ``1.3.9`` | ``foss/2017b`` ``1.3.9`` | ``intel/2017b`` ``1.3.9`` | ``iomkl/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Seurat.md b/docs/version-specific/supported-software/s/Seurat.md index ccf4ac984..b655163a2 100644 --- a/docs/version-specific/supported-software/s/Seurat.md +++ b/docs/version-specific/supported-software/s/Seurat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Seurat Seurat is an R package designed for QC, analysis, and exploration of single cell RNA-seq data. @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``4.4.0`` | ``-R-4.2.2`` | ``foss/2022b`` ``5.0.1`` | ``-R-4.2.2`` | ``foss/2022b`` ``5.1.0`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SeuratData.md b/docs/version-specific/supported-software/s/SeuratData.md index 5b2f6b962..55a45f193 100644 --- a/docs/version-specific/supported-software/s/SeuratData.md +++ b/docs/version-specific/supported-software/s/SeuratData.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SeuratData SeuratData is a mechanism for distributing datasets in the form of Seurat objects using R's internal package and data management systems. @@ -7,3 +11,6 @@ SeuratData is a mechanism for distributing datasets in the form of Seurat object version | versionsuffix | toolchain --------|---------------|---------- ``20210514`` | ``-R-4.0.3`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SeuratDisk.md b/docs/version-specific/supported-software/s/SeuratDisk.md index f06d8a10f..18107831a 100644 --- a/docs/version-specific/supported-software/s/SeuratDisk.md +++ b/docs/version-specific/supported-software/s/SeuratDisk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SeuratDisk Interfaces for HDF5-based Single Cell File Formats @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.0.0.9020`` | ``-R-4.2.1`` | ``foss/2022a`` ``20231104`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SeuratWrappers.md b/docs/version-specific/supported-software/s/SeuratWrappers.md index 7fd031f2b..919d00f87 100644 --- a/docs/version-specific/supported-software/s/SeuratWrappers.md +++ b/docs/version-specific/supported-software/s/SeuratWrappers.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SeuratWrappers SeuratWrappers is a collection of community-provided methods and extensions for Seurat @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``20210528`` | ``-R-4.0.3`` | ``foss/2020b`` ``20221022`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Shannon.md b/docs/version-specific/supported-software/s/Shannon.md index b6bbce12d..95b74412d 100644 --- a/docs/version-specific/supported-software/s/Shannon.md +++ b/docs/version-specific/supported-software/s/Shannon.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Shannon Shannon is a program for assembling transcripts from RNA-Seq data @@ -7,3 +11,6 @@ Shannon is a program for assembling transcripts from RNA-Seq data version | versionsuffix | toolchain --------|---------------|---------- ``20170511`` | ``-Python-2.7.13`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Shapely.md b/docs/version-specific/supported-software/s/Shapely.md index 0fe82c40c..104500998 100644 --- a/docs/version-specific/supported-software/s/Shapely.md +++ b/docs/version-specific/supported-software/s/Shapely.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Shapely Shapely is a BSD-licensed Python package for manipulation and analysis of planar geometric objects. It is based on the widely deployed GEOS (the engine of PostGIS) and JTS (from which GEOS is ported) libraries. @@ -18,3 +22,6 @@ version | versionsuffix | toolchain ``1.8a1`` | | ``iccifort/2020.4.304`` ``2.0.1`` | | ``foss/2022b`` ``2.0.1`` | | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Shasta.md b/docs/version-specific/supported-software/s/Shasta.md index 53b8e9b50..01887b1ab 100644 --- a/docs/version-specific/supported-software/s/Shasta.md +++ b/docs/version-specific/supported-software/s/Shasta.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Shasta The goal of the Shasta long read assembler is to rapidly produce accurate assembled sequence using DNA reads generated by Oxford Nanopore flow cells as input. Computational methods used by the Shasta assembler include: Using a run-length representation of the read sequence. This makes the assembly process more resilient to errors in homopolymer repeat counts, which are the most common type of errors in Oxford Nanopore reads. Using in some phases of the computation a representation of the read sequence based on markers, a fixed subset of short k-mers (k ≈ 10). @@ -7,3 +11,6 @@ The goal of the Shasta long read assembler is to rapidly produce accurate assemb version | toolchain --------|---------- ``0.8.0`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/ShengBTE.md b/docs/version-specific/supported-software/s/ShengBTE.md index 0272678da..707f1c5f7 100644 --- a/docs/version-specific/supported-software/s/ShengBTE.md +++ b/docs/version-specific/supported-software/s/ShengBTE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ShengBTE A solver for the Boltzmann transport equation for phonons. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.1.1`` | ``foss/2021a`` ``1.5.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Short-Pair.md b/docs/version-specific/supported-software/s/Short-Pair.md index fe00fd559..10c03a997 100644 --- a/docs/version-specific/supported-software/s/Short-Pair.md +++ b/docs/version-specific/supported-software/s/Short-Pair.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Short-Pair Sensitive Short Read Homology Search for Paired-End Reads @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``20170125`` | ``-Python-2.7.15`` | ``foss/2018b`` ``20170125`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SiNVICT.md b/docs/version-specific/supported-software/s/SiNVICT.md index ccaf7fd47..1edf5f1f3 100644 --- a/docs/version-specific/supported-software/s/SiNVICT.md +++ b/docs/version-specific/supported-software/s/SiNVICT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SiNVICT SiNVICT is a tool for the detection of SNVs and indels from cfDNA/ctDNA samples obtained by ultra-deep sequencing. @@ -7,3 +11,6 @@ SiNVICT is a tool for the detection of SNVs and indels from cfDNA/ctDNA samples version | toolchain --------|---------- ``1.0-20180817`` | ``GCC/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Sibelia.md b/docs/version-specific/supported-software/s/Sibelia.md index 8ad3bbca0..743150d0d 100644 --- a/docs/version-specific/supported-software/s/Sibelia.md +++ b/docs/version-specific/supported-software/s/Sibelia.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Sibelia Sibelia: A comparative genomics tool: It assists biologists in analysing the genomic variations that correlate with pathogens, or the genomic changes that help microorganisms adapt in different environments. Sibelia will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms. @@ -9,3 +13,6 @@ version | toolchain ``3.0.6`` | ``foss/2016b`` ``3.0.7`` | ``foss/2018b`` ``3.0.7`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Siesta.md b/docs/version-specific/supported-software/s/Siesta.md index 5e3e2269f..52252c245 100644 --- a/docs/version-specific/supported-software/s/Siesta.md +++ b/docs/version-specific/supported-software/s/Siesta.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Siesta SIESTA is both a method and its computer program implementation, to perform efficient electronic structure calculations and ab initio molecular dynamics simulations of molecules and solids. @@ -21,3 +25,6 @@ version | versionsuffix | toolchain ``4.1.5`` | | ``foss/2022a`` ``4.1.5`` | | ``intel/2020a`` ``4.1.5`` | | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SignalP.md b/docs/version-specific/supported-software/s/SignalP.md index 379bd08fb..2b5f8a9c1 100644 --- a/docs/version-specific/supported-software/s/SignalP.md +++ b/docs/version-specific/supported-software/s/SignalP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SignalP SignalP predicts the presence and location of signal peptide cleavage sites in amino acid sequences from different organisms @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``6.0g`` | ``-fast-CUDA-11.7.0`` | ``foss/2022a`` ``6.0g`` | ``-fast`` | ``foss/2022a`` ``6.0h`` | ``-fast`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SimNIBS.md b/docs/version-specific/supported-software/s/SimNIBS.md index bcf09943d..85388c759 100644 --- a/docs/version-specific/supported-software/s/SimNIBS.md +++ b/docs/version-specific/supported-software/s/SimNIBS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SimNIBS SimNIBS is a free and open source software package for the Simulation of Non-invasive Brain Stimulation. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.2.4`` | ``foss/2020b`` ``4.0.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SimPEG.md b/docs/version-specific/supported-software/s/SimPEG.md index bac4d0ba4..3c601fcb1 100644 --- a/docs/version-specific/supported-software/s/SimPEG.md +++ b/docs/version-specific/supported-software/s/SimPEG.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SimPEG Simulation and Parameter Estimation in Geophysics - A python package for simulation and gradient based parameter estimation in the context of geophysical applications. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.18.1`` | | ``foss/2021b`` ``0.18.1`` | | ``intel/2021b`` ``0.3.1`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SimVascular.md b/docs/version-specific/supported-software/s/SimVascular.md index 60787068a..b09b4eebc 100644 --- a/docs/version-specific/supported-software/s/SimVascular.md +++ b/docs/version-specific/supported-software/s/SimVascular.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SimVascular SimVascular is an open source software suite for cardiovascular simulation, providing a complete pipeline from medical image data to 3D model construction, meshing, and blood flow simulation. @@ -7,3 +11,6 @@ SimVascular is an open source software suite for cardiovascular simulation, prov version | toolchain --------|---------- ``2.16.0406`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Simple-DFTD3.md b/docs/version-specific/supported-software/s/Simple-DFTD3.md index 2a6bde5e0..77d69d57b 100644 --- a/docs/version-specific/supported-software/s/Simple-DFTD3.md +++ b/docs/version-specific/supported-software/s/Simple-DFTD3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Simple-DFTD3 Reimplementation of the D3 dispersion correction. The s-dftd3 project aims to provide a user-friendly and uniform interface to the D3 dispersion model and for the calculation of DFT-D3 dispersion corrections. @@ -7,3 +11,6 @@ Reimplementation of the D3 dispersion correction. The s-dftd3 project aims to pr version | toolchain --------|---------- ``0.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SimpleElastix.md b/docs/version-specific/supported-software/s/SimpleElastix.md index 56124d815..5f6167ce1 100644 --- a/docs/version-specific/supported-software/s/SimpleElastix.md +++ b/docs/version-specific/supported-software/s/SimpleElastix.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SimpleElastix Multi-lingual medical image registration library. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.10.0`` | ``-Python-3.6.3`` | ``foss/2017b`` ``0.10.0`` | ``-Python-3.6.4`` | ``foss/2018a`` ``1.1.0`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SimpleITK.md b/docs/version-specific/supported-software/s/SimpleITK.md index e6a5473a0..f11f46f20 100644 --- a/docs/version-specific/supported-software/s/SimpleITK.md +++ b/docs/version-specific/supported-software/s/SimpleITK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SimpleITK ITK is an open-source, cross-platform system that provides developers with an extensive suite of software tools for image analysis. Among them, SimpleITK is a simplified layer built on top of ITK, intended to facilitate its use in rapid prototyping, education, interpreted languages. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``2.1.1.2`` | | ``foss/2021b`` ``2.1.1.2`` | | ``foss/2022a`` ``2.3.1`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Simstrat.md b/docs/version-specific/supported-software/s/Simstrat.md index 0cc36eebc..3e866c593 100644 --- a/docs/version-specific/supported-software/s/Simstrat.md +++ b/docs/version-specific/supported-software/s/Simstrat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Simstrat Simstrat is a one-dimensional physical lake model for the simulation of stratification and mixing in deep stratified lakes. @@ -7,3 +11,6 @@ Simstrat is a one-dimensional physical lake model for the simulation of stratifi version | toolchain --------|---------- ``3.01`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SingleM.md b/docs/version-specific/supported-software/s/SingleM.md index 1738a043c..fdae3e344 100644 --- a/docs/version-specific/supported-software/s/SingleM.md +++ b/docs/version-specific/supported-software/s/SingleM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SingleM SingleM is a tool to find the abundances of discrete operational taxonomic units (OTUs) directly from shotgun metagenome data, without heavy reliance on reference sequence databases. @@ -7,3 +11,6 @@ SingleM is a tool to find the abundances of discrete operational taxonomic units version | versionsuffix | toolchain --------|---------------|---------- ``0.12.1`` | ``-Python-2.7.15`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Singular.md b/docs/version-specific/supported-software/s/Singular.md index 3a5c056ea..66c343912 100644 --- a/docs/version-specific/supported-software/s/Singular.md +++ b/docs/version-specific/supported-software/s/Singular.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Singular Singular is a computer algebra system for polynomial computations, with special emphasis on commutative and non-commutative algebra, algebraic geometry, and singularity theory. @@ -10,3 +14,6 @@ version | toolchain ``4.1.2`` | ``system`` ``4.3.2p10`` | ``gfbf/2022a`` ``4.4.0`` | ``gfbf/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SlamDunk.md b/docs/version-specific/supported-software/s/SlamDunk.md index 7fb96ef09..d423c1cb7 100644 --- a/docs/version-specific/supported-software/s/SlamDunk.md +++ b/docs/version-specific/supported-software/s/SlamDunk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SlamDunk SlamDunk is a novel, fully automated software tool for automated, robust, scalable and reproducible SLAMseq data analysis. @@ -7,3 +11,6 @@ SlamDunk is a novel, fully automated software tool for automated, robust, scalab version | toolchain --------|---------- ``0.4.3`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Smoldyn.md b/docs/version-specific/supported-software/s/Smoldyn.md index 6578dad8c..aced860b6 100644 --- a/docs/version-specific/supported-software/s/Smoldyn.md +++ b/docs/version-specific/supported-software/s/Smoldyn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Smoldyn Smoldyn is a computer program for cell-scale biochemical simulations. It simulates each molecule of interest individually to capture natural stochasticity and to yield nanometer-scale spatial resolution. It treats other molecules implicitly, enabling it to simulate hundreds of thousands of molecules over several minutes of real time. Simulated molecules diffuse, react, are confined by surfaces, and bind to membranes much as they would in a real biological system. @@ -7,3 +11,6 @@ Smoldyn is a computer program for cell-scale biochemical simulations. It simulat version | toolchain --------|---------- ``2.48`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Sniffles.md b/docs/version-specific/supported-software/s/Sniffles.md index 2a8bd01d8..523c41fd8 100644 --- a/docs/version-specific/supported-software/s/Sniffles.md +++ b/docs/version-specific/supported-software/s/Sniffles.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Sniffles A fast structural variant caller for long-read sequencing, Sniffles2 accurately detect SVs on germline, somatic and population-level for PacBio and Oxford Nanopore read data. @@ -7,3 +11,6 @@ A fast structural variant caller for long-read sequencing, Sniffles2 accurately version | toolchain --------|---------- ``2.0.7`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SoPlex.md b/docs/version-specific/supported-software/s/SoPlex.md index b425bb018..17b8f4d34 100644 --- a/docs/version-specific/supported-software/s/SoPlex.md +++ b/docs/version-specific/supported-software/s/SoPlex.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SoPlex SoPlex is an optimization package for solving linear programming problems (LPs) based on an advanced implementation of the primal and dual revised simplex algorithm. It provides special support for the exact solution of LPs with rational input data. It can be used as a standalone solver reading MPS or LP format files via a command line interface as well as embedded into other programs via a C++ class library. @@ -7,3 +11,6 @@ SoPlex is an optimization package for solving linear programming problems (LPs) version | toolchain --------|---------- ``2.2.1`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SoQt.md b/docs/version-specific/supported-software/s/SoQt.md index 8e1598add..9d2e39b3c 100644 --- a/docs/version-specific/supported-software/s/SoQt.md +++ b/docs/version-specific/supported-software/s/SoQt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SoQt SoQt is a Qt GUI component toolkit library for Coin. It is also compatible with SGI and TGS Open Inventor, and the API is based on the API of the InventorXt GUI component toolkit. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.6.0`` | ``GCC/10.3.0`` ``1.6.0`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SoX.md b/docs/version-specific/supported-software/s/SoX.md index 4fe73244c..a10a26b49 100644 --- a/docs/version-specific/supported-software/s/SoX.md +++ b/docs/version-specific/supported-software/s/SoX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SoX SoX is the Swiss Army Knife of sound processing utilities. It can convert audio files to other popular audio file types and also apply sound effects and filters during the conversion. @@ -9,3 +13,6 @@ version | toolchain ``14.4.2`` | ``GCC/8.3.0`` ``14.4.2`` | ``GCCcore/11.3.0`` ``14.4.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SoXt.md b/docs/version-specific/supported-software/s/SoXt.md index aace06c27..8e5e5cc46 100644 --- a/docs/version-specific/supported-software/s/SoXt.md +++ b/docs/version-specific/supported-software/s/SoXt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SoXt SoXt is an Xt/Motif glue library for Coin. It can also be used on top of the SGI or TGS implementation of Open Inventor, and is designed to be source code compatible with SGI's InventorXt library. @@ -7,3 +11,6 @@ SoXt is an Xt/Motif glue library for Coin. It can also be used on top of the SG version | toolchain --------|---------- ``1.4.0`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SolexaQA++.md b/docs/version-specific/supported-software/s/SolexaQA++.md index b612c67bf..38193e6b0 100644 --- a/docs/version-specific/supported-software/s/SolexaQA++.md +++ b/docs/version-specific/supported-software/s/SolexaQA++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SolexaQA++ SolexaQA calculates sequence quality statistics and creates visual representations of data quality for second-generation sequencing data. Originally developed for the Illumina system (historically known as “Solexa”), SolexaQA now also supports Ion Torrent and 454 data. @@ -7,3 +11,6 @@ SolexaQA calculates sequence quality statistics and creates visual representatio version | toolchain --------|---------- ``3.1.5`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SortMeRNA.md b/docs/version-specific/supported-software/s/SortMeRNA.md index 056f5eb1b..f47177c72 100644 --- a/docs/version-specific/supported-software/s/SortMeRNA.md +++ b/docs/version-specific/supported-software/s/SortMeRNA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SortMeRNA SortMeRNA is a biological sequence analysis tool for filtering, mapping and OTU-picking NGS reads. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.1`` | ``GCC/9.3.0`` ``2.1`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SoupX.md b/docs/version-specific/supported-software/s/SoupX.md index 6db95bb1c..3e49841b4 100644 --- a/docs/version-specific/supported-software/s/SoupX.md +++ b/docs/version-specific/supported-software/s/SoupX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SoupX " Quantify, profile and remove ambient mRNA contamination (the "soup") from droplet based single cell RNA-seq experiments. Implements the method described in Young et al. (2018) . @@ -7,3 +11,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.6.2`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SpaceRanger.md b/docs/version-specific/supported-software/s/SpaceRanger.md index 9bd0b5a81..0c6a75b02 100644 --- a/docs/version-specific/supported-software/s/SpaceRanger.md +++ b/docs/version-specific/supported-software/s/SpaceRanger.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SpaceRanger Space Ranger is a set of analysis pipelines that process Visium spatial RNA-seq output and brightfield microscope images in order to detect tissue, align reads, generate feature-spot matrices, perform clustering and gene expression analysis, and place spots in spatial context on the slide image. @@ -14,3 +18,6 @@ version | toolchain ``2.0.1`` | ``GCC/11.3.0`` ``2.1.0`` | ``GCC/11.3.0`` ``2.1.0`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Spack.md b/docs/version-specific/supported-software/s/Spack.md index fb929b299..d1431a226 100644 --- a/docs/version-specific/supported-software/s/Spack.md +++ b/docs/version-specific/supported-software/s/Spack.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Spack Spack is a package manager for supercomputers, Linux, and macOS. It makes installing scientific software easy. With Spack, you can build a package with multiple versions, configurations, platforms, and compilers, and all of these builds can coexist on the same machine. @@ -13,3 +17,6 @@ version | toolchain ``0.17.0`` | ``system`` ``0.17.2`` | ``system`` ``0.21.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Spark.md b/docs/version-specific/supported-software/s/Spark.md index 8bd4969dc..6dfdb6e7d 100644 --- a/docs/version-specific/supported-software/s/Spark.md +++ b/docs/version-specific/supported-software/s/Spark.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Spark Spark is Hadoop MapReduce done in memory @@ -32,3 +36,6 @@ version | versionsuffix | toolchain ``3.3.1`` | | ``foss/2022a`` ``3.5.0`` | | ``foss/2023a`` ``3.5.1`` | ``-Java-17`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SpatialDE.md b/docs/version-specific/supported-software/s/SpatialDE.md index eeb945c3d..74bb6e2ef 100644 --- a/docs/version-specific/supported-software/s/SpatialDE.md +++ b/docs/version-specific/supported-software/s/SpatialDE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SpatialDE SpatialDE is a method to identify genes which significantly depend on spatial coordinates in non-linear and non-parametric ways. The intended applications are spatially resolved RNA-sequencing from e.g. Spatial Transcriptomics, or in situ gene expression measurements from e.g. SeqFISH or MERFISH. @@ -7,3 +11,6 @@ SpatialDE is a method to identify genes which significantly depend on spatial co version | toolchain --------|---------- ``1.1.3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SpectrA.md b/docs/version-specific/supported-software/s/SpectrA.md index d48de1428..b2aa647ef 100644 --- a/docs/version-specific/supported-software/s/SpectrA.md +++ b/docs/version-specific/supported-software/s/SpectrA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SpectrA Spectra stands for Sparse Eigenvalue Computation Toolkit as a Redesigned ARPACK. It is a C++ library for large scale eigenvalue problems, built on top of Eigen, an open source linear algebra library. @@ -10,3 +14,6 @@ version | toolchain ``1.0.1`` | ``GCCcore/11.2.0`` ``1.0.1`` | ``GCCcore/11.3.0`` ``1.0.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Sphinx-RTD-Theme.md b/docs/version-specific/supported-software/s/Sphinx-RTD-Theme.md index 38d7ad70d..d4c148b54 100644 --- a/docs/version-specific/supported-software/s/Sphinx-RTD-Theme.md +++ b/docs/version-specific/supported-software/s/Sphinx-RTD-Theme.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Sphinx-RTD-Theme Sphinx theme designed to provide a great reader experience for documentation users on both desktop and mobile devices. @@ -7,3 +11,6 @@ Sphinx theme designed to provide a great reader experience for documentation us version | toolchain --------|---------- ``1.1.1`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Sphinx.md b/docs/version-specific/supported-software/s/Sphinx.md index e76a33d1e..d30a34f20 100644 --- a/docs/version-specific/supported-software/s/Sphinx.md +++ b/docs/version-specific/supported-software/s/Sphinx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Sphinx Sphinx is a tool that makes it easy to create intelligent and beautiful documentation. It was originally created for the new Python documentation, and it has excellent facilities for the documentation of Python projects, but C/C++ is already supported as well, and it is planned to add special support for other languages as well. @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``1.8.1`` | ``-Python-3.6.3`` | ``intel/2017b`` ``1.8.1`` | ``-Python-3.6.6`` | ``intel/2018b`` ``1.8.3`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SpiceyPy.md b/docs/version-specific/supported-software/s/SpiceyPy.md index 6705a9438..8769fdd7a 100644 --- a/docs/version-specific/supported-software/s/SpiceyPy.md +++ b/docs/version-specific/supported-software/s/SpiceyPy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SpiceyPy SpiceyPy is a Python wrapper for the NAIF C SPICE Toolkit (N65) @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``2.1.0`` | ``-Python-3.6.3`` | ``foss/2017b`` ``2.1.0`` | ``-Python-3.6.4`` | ``foss/2018a`` ``2.1.0`` | ``-Python-3.6.3`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SpiecEasi.md b/docs/version-specific/supported-software/s/SpiecEasi.md index c114e4b86..d873f03b7 100644 --- a/docs/version-specific/supported-software/s/SpiecEasi.md +++ b/docs/version-specific/supported-software/s/SpiecEasi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SpiecEasi Sparse InversE Covariance estimation for Ecological Association and Statistical Inference @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.0.0`` | ``-R-3.4.4`` | ``intel/2018a`` ``1.1.1`` | ``-R-4.2.1`` | ``foss/2022a`` ``20160830`` | ``-R-3.3.1`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SplAdder.md b/docs/version-specific/supported-software/s/SplAdder.md index cd6be024d..8a4f568ed 100644 --- a/docs/version-specific/supported-software/s/SplAdder.md +++ b/docs/version-specific/supported-software/s/SplAdder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SplAdder Splicing Adder is a toolbox for alternative splicing analysis based on RNA-Seq alignment data. Briefly, the software takes a given annotation and RNA-Seq read alignments in standardized formats, transforms the annotation into a splicing graph representation, augments the splicing graph with additional information extracted from the read data, extracts alternative splicing events from the graph and quantifies the events based on the alignment data. @@ -7,3 +11,6 @@ Splicing Adder is a toolbox for alternative splicing analysis based on RNA-Seq a version | versionsuffix | toolchain --------|---------------|---------- ``2.4.2`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SpliceMap.md b/docs/version-specific/supported-software/s/SpliceMap.md index af404b25d..26205e704 100644 --- a/docs/version-specific/supported-software/s/SpliceMap.md +++ b/docs/version-specific/supported-software/s/SpliceMap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SpliceMap SpliceMap is a de novo splice junction discovery and alignment tool. It offers high sensitivity and support for arbitrary RNA-seq read lengths. @@ -7,3 +11,6 @@ SpliceMap is a de novo splice junction discovery and alignment tool. It offers version | toolchain --------|---------- ``3.3.5.2`` | ``GCC/7.3.0-2.30`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Spyder.md b/docs/version-specific/supported-software/s/Spyder.md index 9fa219d47..94610ca31 100644 --- a/docs/version-specific/supported-software/s/Spyder.md +++ b/docs/version-specific/supported-software/s/Spyder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Spyder Spyder is an interactive Python development environment providing MATLAB-like features in a simple and light-weighted software. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``3.3.2`` | ``-Python-3.6.6`` | ``foss/2018b`` ``4.1.5`` | ``-Python-3.7.2`` | ``foss/2019a`` ``4.1.5`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SqueezeMeta.md b/docs/version-specific/supported-software/s/SqueezeMeta.md index 46d63c883..866037ac4 100644 --- a/docs/version-specific/supported-software/s/SqueezeMeta.md +++ b/docs/version-specific/supported-software/s/SqueezeMeta.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SqueezeMeta SqueezeMeta is a full automatic pipeline for metagenomics/metatranscriptomics, covering all steps of the analysis. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.4.3`` | ``-Python-2.7.15`` | ``foss/2018b`` ``1.0.0`` | ``-Python-2.7.15`` | ``foss/2018b`` ``1.5.0`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Squidpy.md b/docs/version-specific/supported-software/s/Squidpy.md index 60faf740e..704d219ef 100644 --- a/docs/version-specific/supported-software/s/Squidpy.md +++ b/docs/version-specific/supported-software/s/Squidpy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Squidpy Squidpy is a tool for the analysis and visualization of spatial molecular data. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.2.2`` | ``foss/2021b`` ``1.4.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/StaMPS.md b/docs/version-specific/supported-software/s/StaMPS.md index 0561c111f..6b0e7e5ef 100644 --- a/docs/version-specific/supported-software/s/StaMPS.md +++ b/docs/version-specific/supported-software/s/StaMPS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # StaMPS A software package to extract ground displacements from time series of synthetic aperture radar (SAR) acquisitions. @@ -7,3 +11,6 @@ A software package to extract ground displacements from time series of synthetic version | versionsuffix | toolchain --------|---------------|---------- ``3.3b1`` | ``-Perl-5.24.1`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Stack.md b/docs/version-specific/supported-software/s/Stack.md index 365873cd3..764230757 100644 --- a/docs/version-specific/supported-software/s/Stack.md +++ b/docs/version-specific/supported-software/s/Stack.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Stack Stack is a cross-platform program for developing Haskell projects. It is intended for Haskellers both new and experienced. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``2.11.1`` | ``-x86_64`` | ``system`` ``2.13.1`` | ``-x86_64`` | ``system`` ``2.3.3`` | ``-x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Stacks.md b/docs/version-specific/supported-software/s/Stacks.md index 4c99013a0..ec2741c1f 100644 --- a/docs/version-specific/supported-software/s/Stacks.md +++ b/docs/version-specific/supported-software/s/Stacks.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Stacks Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography. @@ -31,3 +35,6 @@ version | toolchain ``2.53`` | ``iccifort/2019.5.281`` ``2.54`` | ``foss/2020a`` ``2.62`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Stampy.md b/docs/version-specific/supported-software/s/Stampy.md index 96ff38858..71acaa269 100644 --- a/docs/version-specific/supported-software/s/Stampy.md +++ b/docs/version-specific/supported-software/s/Stampy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Stampy Stampy is a package for the mapping of short reads from illumina sequencing machines onto a reference genome. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.0.31`` | ``-Python-2.7.12`` | ``intel/2016b`` ``1.0.32`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Stata.md b/docs/version-specific/supported-software/s/Stata.md index 1f22deb79..a4b22f591 100644 --- a/docs/version-specific/supported-software/s/Stata.md +++ b/docs/version-specific/supported-software/s/Stata.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Stata Stata is a complete, integrated statistical software package that provides everything you need for data analysis, data management, and graphics. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``15`` | | ``system`` ``16`` | ``-legacy`` | ``system`` ``17`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Statistics-R.md b/docs/version-specific/supported-software/s/Statistics-R.md index 23e309422..cf17ade17 100644 --- a/docs/version-specific/supported-software/s/Statistics-R.md +++ b/docs/version-specific/supported-software/s/Statistics-R.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Statistics-R Perl interface with the R statistical program @@ -7,3 +11,6 @@ Perl interface with the R statistical program version | toolchain --------|---------- ``0.34`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Strainberry.md b/docs/version-specific/supported-software/s/Strainberry.md index 919cfcb17..3a05191e0 100644 --- a/docs/version-specific/supported-software/s/Strainberry.md +++ b/docs/version-specific/supported-software/s/Strainberry.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Strainberry Strainberry is a method that performs strain separation in low-complexity metagenomes using error-prone long-read technologies. It exploits state-of-the-art tools for variant calling, haplotype phasing, and genome assembly, in order to achieve single-sample assembly of strains with higher quality than other state-of-the-art long-read assemblers. @@ -7,3 +11,6 @@ Strainberry is a method that performs strain separation in low-complexity metage version | toolchain --------|---------- ``1.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/StringTie.md b/docs/version-specific/supported-software/s/StringTie.md index d7d7692d6..1ac032298 100644 --- a/docs/version-specific/supported-software/s/StringTie.md +++ b/docs/version-specific/supported-software/s/StringTie.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # StringTie StringTie is a fast and highly efficient assembler of RNA-Seq alignments into potential transcripts. @@ -22,3 +26,6 @@ version | versionsuffix | toolchain ``2.1.7`` | | ``GCC/10.3.0`` ``2.2.1`` | ``-Python-2.7.18`` | ``GCC/11.2.0`` ``2.2.1`` | | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Structure.md b/docs/version-specific/supported-software/s/Structure.md index efaafacb4..477642437 100644 --- a/docs/version-specific/supported-software/s/Structure.md +++ b/docs/version-specific/supported-software/s/Structure.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Structure The program structure is a free software package for using multi-locus genotype data to investigate population structure. @@ -11,3 +15,6 @@ version | toolchain ``2.3.4`` | ``GCC/8.2.0-2.31.1`` ``2.3.4`` | ``iccifort/2019.3.199-GCC-8.3.0-2.32`` ``2.3.4`` | ``iccifort/2019.5.281`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Structure_threader.md b/docs/version-specific/supported-software/s/Structure_threader.md index 4a5d83801..379517eaa 100644 --- a/docs/version-specific/supported-software/s/Structure_threader.md +++ b/docs/version-specific/supported-software/s/Structure_threader.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Structure_threader A program to parallelize the runs of Structure, fastStructure, MavericK and ALStructure software. @@ -7,3 +11,6 @@ A program to parallelize the runs of Structure, fastStructure, MavericK and ALS version | toolchain --------|---------- ``1.3.10`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SuAVE-biomat.md b/docs/version-specific/supported-software/s/SuAVE-biomat.md index 1a7a23d32..56b74dd43 100644 --- a/docs/version-specific/supported-software/s/SuAVE-biomat.md +++ b/docs/version-specific/supported-software/s/SuAVE-biomat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SuAVE-biomat Surface Assessment via Grid Evaluation (SuAVE) for Every Surface Curvature and Cavity Shape @@ -7,3 +11,6 @@ Surface Assessment via Grid Evaluation (SuAVE) for Every Surface Curvature and C version | toolchain --------|---------- ``2.0.0-20230815`` | ``intel/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Subread.md b/docs/version-specific/supported-software/s/Subread.md index 3551f69e1..f4437aa82 100644 --- a/docs/version-specific/supported-software/s/Subread.md +++ b/docs/version-specific/supported-software/s/Subread.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Subread High performance read alignment, quantification and mutation discovery @@ -17,3 +21,6 @@ version | toolchain ``2.0.3`` | ``GCC/11.2.0`` ``2.0.3`` | ``GCC/9.3.0`` ``2.0.4`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Subversion.md b/docs/version-specific/supported-software/s/Subversion.md index a825a1c79..746feb68b 100644 --- a/docs/version-specific/supported-software/s/Subversion.md +++ b/docs/version-specific/supported-software/s/Subversion.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Subversion Subversion is an open source version control system. @@ -16,3 +20,6 @@ version | toolchain ``1.14.2`` | ``GCCcore/11.3.0`` ``1.9.7`` | ``iomkl/2018a`` ``1.9.9`` | ``GCCcore/7.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SuiteSparse.md b/docs/version-specific/supported-software/s/SuiteSparse.md index da85911dd..3ffa0fcbb 100644 --- a/docs/version-specific/supported-software/s/SuiteSparse.md +++ b/docs/version-specific/supported-software/s/SuiteSparse.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SuiteSparse SuiteSparse is a collection of libraries manipulate sparse matrices. @@ -49,3 +53,6 @@ version | versionsuffix | toolchain ``5.8.1`` | ``-METIS-5.1.0`` | ``foss/2020b`` ``5.8.1`` | ``-METIS-5.1.0`` | ``intel/2020b`` ``7.1.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SunPy.md b/docs/version-specific/supported-software/s/SunPy.md index e9d7eb8ab..d5d323e95 100644 --- a/docs/version-specific/supported-software/s/SunPy.md +++ b/docs/version-specific/supported-software/s/SunPy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SunPy The community-developed, free and open-source solar data analysis environment for Python. @@ -7,3 +11,6 @@ The community-developed, free and open-source solar data analysis environment fo version | versionsuffix | toolchain --------|---------------|---------- ``1.1.3`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SuperLU.md b/docs/version-specific/supported-software/s/SuperLU.md index a78ce0876..6a9beb2ff 100644 --- a/docs/version-specific/supported-software/s/SuperLU.md +++ b/docs/version-specific/supported-software/s/SuperLU.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SuperLU SuperLU is a general purpose library for the direct solution of large, sparse, nonsymmetric systems of linear equations on high performance machines. @@ -17,3 +21,6 @@ version | toolchain ``5.3.0`` | ``foss/2022a`` ``5.3.0`` | ``intel/2020b`` ``5.3.0`` | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SuperLU_DIST.md b/docs/version-specific/supported-software/s/SuperLU_DIST.md index 706617e28..ea50c9843 100644 --- a/docs/version-specific/supported-software/s/SuperLU_DIST.md +++ b/docs/version-specific/supported-software/s/SuperLU_DIST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SuperLU_DIST SuperLU is a general purpose library for the direct solution of large, sparse, nonsymmetric systems of linear equations on high performance machines. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``8.1.0`` | | ``foss/2022a`` ``8.1.2`` | | ``foss/2022b`` ``8.1.2`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SyRI.md b/docs/version-specific/supported-software/s/SyRI.md index 4bf79dc98..ad8bc95ba 100644 --- a/docs/version-specific/supported-software/s/SyRI.md +++ b/docs/version-specific/supported-software/s/SyRI.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SyRI Synteny and Rearrangement Identifier (SyRI). @@ -7,3 +11,6 @@ Synteny and Rearrangement Identifier (SyRI). version | toolchain --------|---------- ``1.4`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SymEngine-python.md b/docs/version-specific/supported-software/s/SymEngine-python.md index 085d54ec0..e4de16ddd 100644 --- a/docs/version-specific/supported-software/s/SymEngine-python.md +++ b/docs/version-specific/supported-software/s/SymEngine-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SymEngine-python Python wrappers to the C++ library SymEngine, a fast C++ symbolic manipulation library. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.11.0`` | ``gfbf/2023b`` ``0.7.2`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/SymEngine.md b/docs/version-specific/supported-software/s/SymEngine.md index 0a236f5f3..f06a62e8e 100644 --- a/docs/version-specific/supported-software/s/SymEngine.md +++ b/docs/version-specific/supported-software/s/SymEngine.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # SymEngine SymEngine is a standalone fast C++ symbolic manipulation library @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.3.0`` | ``-20181006`` | ``intel/2018a`` ``0.4.0`` | | ``GCC/8.2.0-2.31.1`` ``0.7.0`` | | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/Szip.md b/docs/version-specific/supported-software/s/Szip.md index 22705a9e0..18983291b 100644 --- a/docs/version-specific/supported-software/s/Szip.md +++ b/docs/version-specific/supported-software/s/Szip.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Szip Szip compression software, providing lossless compression of scientific data @@ -34,3 +38,6 @@ version | toolchain ``2.1.1`` | ``GCCcore/8.2.0`` ``2.1.1`` | ``GCCcore/8.3.0`` ``2.1.1`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/index.md b/docs/version-specific/supported-software/s/index.md index 9cc604ff9..6df25fe7e 100644 --- a/docs/version-specific/supported-software/s/index.md +++ b/docs/version-specific/supported-software/s/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (s) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - *s* - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [S-Lang](S-Lang.md) * [s3fs](s3fs.md) * [S4](S4.md) diff --git a/docs/version-specific/supported-software/s/s3fs.md b/docs/version-specific/supported-software/s/s3fs.md index 27a927edf..8f61dd41d 100644 --- a/docs/version-specific/supported-software/s/s3fs.md +++ b/docs/version-specific/supported-software/s/s3fs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # s3fs S3FS builds on aiobotocore to provide a convenient Python filesystem interface for S3.. @@ -7,3 +11,6 @@ S3FS builds on aiobotocore to provide a convenient Python filesystem interface f version | toolchain --------|---------- ``2023.12.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/safestringlib.md b/docs/version-specific/supported-software/s/safestringlib.md index 8e56e21a9..90459d388 100644 --- a/docs/version-specific/supported-software/s/safestringlib.md +++ b/docs/version-specific/supported-software/s/safestringlib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # safestringlib The Secure Development Lifecycle (SDL) recommends banning certain C Library functions because they directly contribute to security vulnerabilities such as buffer overflows. However routines for the manipulation of strings and memory buffers are common in software and firmware, and are essential to accomplish certain programming tasks. Safer replacements for these functions that avoid or prevent serious security vulnerabilities (e.g. buffer overflows, string format attacks, conversion overflows/underflows, etc.) are available in the SafeString Library. @@ -7,3 +11,6 @@ The Secure Development Lifecycle (SDL) recommends banning certain C Library func version | toolchain --------|---------- ``20240228`` | ``intel-compilers/2023.1.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/samblaster.md b/docs/version-specific/supported-software/s/samblaster.md index 9f6d039cb..034f8f694 100644 --- a/docs/version-specific/supported-software/s/samblaster.md +++ b/docs/version-specific/supported-software/s/samblaster.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # samblaster samblaster is a fast and flexible program for marking duplicates in read-id grouped1 paired-end SAM files. @@ -10,3 +14,6 @@ version | toolchain ``0.1.26`` | ``GCC/10.2.0`` ``0.1.26`` | ``GCC/10.3.0`` ``0.1.26`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/samclip.md b/docs/version-specific/supported-software/s/samclip.md index f02ba2b7b..4278813f7 100644 --- a/docs/version-specific/supported-software/s/samclip.md +++ b/docs/version-specific/supported-software/s/samclip.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # samclip Filter SAM file for soft and hard clipped alignments @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.4.0`` | | ``GCCcore/10.2.0`` ``0.4.0`` | | ``GCCcore/11.2.0`` ``0.4.0`` | | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/samplot.md b/docs/version-specific/supported-software/s/samplot.md index dd7b815ee..06929e5e6 100644 --- a/docs/version-specific/supported-software/s/samplot.md +++ b/docs/version-specific/supported-software/s/samplot.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # samplot Plot structural variant signals from many BAMs and CRAMs. @@ -7,3 +11,6 @@ Plot structural variant signals from many BAMs and CRAMs. version | toolchain --------|---------- ``1.3.0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sansa.md b/docs/version-specific/supported-software/s/sansa.md index e0eb7e4a2..15ae5a8f8 100644 --- a/docs/version-specific/supported-software/s/sansa.md +++ b/docs/version-specific/supported-software/s/sansa.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sansa Structural variant (SV) annotation, a companion to the 'dolly' tool. @@ -7,3 +11,6 @@ Structural variant (SV) annotation, a companion to the 'dolly' tool. version | toolchain --------|---------- ``0.0.7`` | ``gompi/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/savvy.md b/docs/version-specific/supported-software/s/savvy.md index 5528b5b62..1234ddf11 100644 --- a/docs/version-specific/supported-software/s/savvy.md +++ b/docs/version-specific/supported-software/s/savvy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # savvy Interface to various variant calling formats. @@ -7,3 +11,6 @@ Interface to various variant calling formats. version | toolchain --------|---------- ``1.3.0`` | ``GCC/8.2.0-2.31.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sbt.md b/docs/version-specific/supported-software/s/sbt.md index 89fa1f4ee..042148f52 100644 --- a/docs/version-specific/supported-software/s/sbt.md +++ b/docs/version-specific/supported-software/s/sbt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sbt sbt is a build tool for Scala, Java, and more. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.3.13`` | ``-Java-1.8`` | ``system`` ``1.3.13`` | ``-Java-8`` | ``system`` ``1.6.2`` | ``-Java-8`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scArches.md b/docs/version-specific/supported-software/s/scArches.md index 08b93ebc9..f3309181f 100644 --- a/docs/version-specific/supported-software/s/scArches.md +++ b/docs/version-specific/supported-software/s/scArches.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scArches Single-cell architecture surgery (scArches) is a package for reference-based analysis of single-cell data. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.5.6`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``0.5.6`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scCODA.md b/docs/version-specific/supported-software/s/scCODA.md index b5c008b88..1f22c73bf 100644 --- a/docs/version-specific/supported-software/s/scCODA.md +++ b/docs/version-specific/supported-software/s/scCODA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scCODA scCODA allows for identification of compositional changes in high-throughput sequencing count data, especially cell compositions from scRNA-seq. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.1.9`` | ``foss/2021a`` ``0.1.9`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scGSVA.md b/docs/version-specific/supported-software/s/scGSVA.md index ada0a9494..321ce6c74 100644 --- a/docs/version-specific/supported-software/s/scGSVA.md +++ b/docs/version-specific/supported-software/s/scGSVA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scGSVA scGSVA provides wrap functions to do GSVA analysis for single cell data. And scGSVA includes functions to build annotation for almost all species. scGSVA also provides function to generate figures based on the GSVA results. @@ -7,3 +11,6 @@ scGSVA provides wrap functions to do GSVA analysis for single cell data. And scG version | versionsuffix | toolchain --------|---------------|---------- ``0.0.14`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scGeneFit.md b/docs/version-specific/supported-software/s/scGeneFit.md index fd932424e..8fee303a0 100644 --- a/docs/version-specific/supported-software/s/scGeneFit.md +++ b/docs/version-specific/supported-software/s/scGeneFit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scGeneFit Python code for genetic marker selection using linear programming. @@ -7,3 +11,6 @@ Python code for genetic marker selection using linear programming. version | toolchain --------|---------- ``1.0.2`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scHiCExplorer.md b/docs/version-specific/supported-software/s/scHiCExplorer.md index f82ea2887..e0ce6bbb4 100644 --- a/docs/version-specific/supported-software/s/scHiCExplorer.md +++ b/docs/version-specific/supported-software/s/scHiCExplorer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scHiCExplorer The scHiCExplorer is a software to demultiplex, process, correct, normalize, manipulate, analyse and visualize single-cell Hi-C data. @@ -7,3 +11,6 @@ The scHiCExplorer is a software to demultiplex, process, correct, normalize, man version | toolchain --------|---------- ``7`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scPred.md b/docs/version-specific/supported-software/s/scPred.md index 2b24f341f..4936e5997 100644 --- a/docs/version-specific/supported-software/s/scPred.md +++ b/docs/version-specific/supported-software/s/scPred.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scPred scPred package for cell type prediction from scRNA-seq data @@ -7,3 +11,6 @@ scPred package for cell type prediction from scRNA-seq data version | versionsuffix | toolchain --------|---------------|---------- ``1.9.2`` | ``-R-4.1.2`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scVelo.md b/docs/version-specific/supported-software/s/scVelo.md index e6fe03e73..2928dc10b 100644 --- a/docs/version-specific/supported-software/s/scVelo.md +++ b/docs/version-specific/supported-software/s/scVelo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scVelo scVelo is a scalable toolkit for estimating and analyzing RNA velocities in single cells using dynamical modeling. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.1.24`` | ``-Python-3.7.4`` | ``foss/2019b`` ``0.2.3`` | | ``foss/2021a`` ``0.3.1`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scanpy.md b/docs/version-specific/supported-software/s/scanpy.md index 4e037a66d..d47a53c7f 100644 --- a/docs/version-specific/supported-software/s/scanpy.md +++ b/docs/version-specific/supported-software/s/scanpy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scanpy Scanpy is a scalable toolkit for analyzing single-cell gene expression data built jointly with anndata. It includes preprocessing, visualization, clustering, trajectory inference and differential expression testing. The Python-based implementation efficiently deals with datasets of more than one million cells. @@ -13,3 +17,6 @@ version | toolchain ``1.9.1`` | ``foss/2021b`` ``1.9.1`` | ``foss/2022a`` ``1.9.8`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sceasy.md b/docs/version-specific/supported-software/s/sceasy.md index 42f8866ac..d1cb9f651 100644 --- a/docs/version-specific/supported-software/s/sceasy.md +++ b/docs/version-specific/supported-software/s/sceasy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sceasy sceasy is a package that helps easy conversion of different single-cell data formats to each other @@ -7,3 +11,6 @@ sceasy is a package that helps easy conversion of different single-cell data for version | versionsuffix | toolchain --------|---------------|---------- ``0.0.7`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sciClone.md b/docs/version-specific/supported-software/s/sciClone.md index 15965a1b6..076d74fcc 100644 --- a/docs/version-specific/supported-software/s/sciClone.md +++ b/docs/version-specific/supported-software/s/sciClone.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sciClone An R package for inferring the subclonal architecture of tumors @@ -7,3 +11,6 @@ An R package for inferring the subclonal architecture of tumors version | versionsuffix | toolchain --------|---------------|---------- ``1.1`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scib-metrics.md b/docs/version-specific/supported-software/s/scib-metrics.md index 7cd7e1435..5e64ae9d8 100644 --- a/docs/version-specific/supported-software/s/scib-metrics.md +++ b/docs/version-specific/supported-software/s/scib-metrics.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scib-metrics Accelerated and Python-only metrics for benchmarking single-cell integration outputs @@ -7,3 +11,6 @@ Accelerated and Python-only metrics for benchmarking single-cell integration out version | toolchain --------|---------- ``0.3.3`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scib.md b/docs/version-specific/supported-software/s/scib.md index b6506897a..12869d752 100644 --- a/docs/version-specific/supported-software/s/scib.md +++ b/docs/version-specific/supported-software/s/scib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scib Benchmarking atlas-level data integration in single-cell genomics. @@ -9,3 +13,6 @@ version | toolchain ``1.1.1`` | ``foss/2022a`` ``1.1.3`` | ``foss/2021a`` ``1.1.4`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scikit-allel.md b/docs/version-specific/supported-software/s/scikit-allel.md index 1b969d69b..245b38e46 100644 --- a/docs/version-specific/supported-software/s/scikit-allel.md +++ b/docs/version-specific/supported-software/s/scikit-allel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scikit-allel This package provides utilities for exploratory analysis of large scale genetic variation data. It is based on numpy, scipy and other general-purpose Python scientific libraries. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.2.1`` | ``-Python-3.8.2`` | ``foss/2020a`` ``1.3.2`` | | ``foss/2020b`` ``1.3.3`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scikit-bio.md b/docs/version-specific/supported-software/s/scikit-bio.md index b0b4c7d34..a766bd171 100644 --- a/docs/version-specific/supported-software/s/scikit-bio.md +++ b/docs/version-specific/supported-software/s/scikit-bio.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scikit-bio scikit-bio is an open-source, BSD-licensed Python 3 package providing data structures, algorithms and educational resources for bioinformatics. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``0.5.7`` | | ``foss/2021b`` ``0.5.7`` | | ``foss/2022a`` ``0.6.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scikit-build-core.md b/docs/version-specific/supported-software/s/scikit-build-core.md index e2f167973..096199069 100644 --- a/docs/version-specific/supported-software/s/scikit-build-core.md +++ b/docs/version-specific/supported-software/s/scikit-build-core.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scikit-build-core Scikit-build-core is a complete ground-up rewrite of scikit-build on top of modern packaging APIs. It provides a bridge between CMake and the Python build system, allowing you to make Python modules with CMake. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.5.0`` | ``GCCcore/12.3.0`` ``0.9.3`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scikit-build.md b/docs/version-specific/supported-software/s/scikit-build.md index 76fc53cb9..b10d66d9e 100644 --- a/docs/version-specific/supported-software/s/scikit-build.md +++ b/docs/version-specific/supported-software/s/scikit-build.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scikit-build Scikit-Build, or skbuild, is an improved build system generator for CPython C/C++/Fortran/Cython extensions. @@ -23,3 +27,6 @@ version | versionsuffix | toolchain ``0.17.2`` | | ``GCCcore/12.2.0`` ``0.17.6`` | | ``GCCcore/12.3.0`` ``0.17.6`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scikit-cuda.md b/docs/version-specific/supported-software/s/scikit-cuda.md index 1d64fa5bb..fff73997e 100644 --- a/docs/version-specific/supported-software/s/scikit-cuda.md +++ b/docs/version-specific/supported-software/s/scikit-cuda.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scikit-cuda SciKit-cuda, a.k.a. skcuda, provides Python interfaces to many of the functions in the CUDA device/runtime, CUBLAS, CUFFT, and CUSOLVER libraries distributed as part of NVIDIA's CUDA Programming Toolkit. @@ -7,3 +11,6 @@ SciKit-cuda, a.k.a. skcuda, provides Python interfaces to many of the functions version | versionsuffix | toolchain --------|---------------|---------- ``0.5.3`` | ``-Python-3.7.4`` | ``fosscuda/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scikit-extremes.md b/docs/version-specific/supported-software/s/scikit-extremes.md index b432796ac..c9376e271 100644 --- a/docs/version-specific/supported-software/s/scikit-extremes.md +++ b/docs/version-specific/supported-software/s/scikit-extremes.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scikit-extremes scikit-extremes is a basic statistical package to perform univariate extreme value calculations using Python @@ -7,3 +11,6 @@ scikit-extremes is a basic statistical package to perform univariate extreme va version | toolchain --------|---------- ``2022.4.10`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scikit-image.md b/docs/version-specific/supported-software/s/scikit-image.md index 120804f90..788e11a83 100644 --- a/docs/version-specific/supported-software/s/scikit-image.md +++ b/docs/version-specific/supported-software/s/scikit-image.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scikit-image scikit-image is a collection of algorithms for image processing. @@ -34,3 +38,6 @@ version | versionsuffix | toolchain ``0.19.3`` | | ``foss/2022a`` ``0.21.0`` | | ``foss/2022b`` ``0.22.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scikit-learn.md b/docs/version-specific/supported-software/s/scikit-learn.md index 587977cff..963ed011f 100644 --- a/docs/version-specific/supported-software/s/scikit-learn.md +++ b/docs/version-specific/supported-software/s/scikit-learn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scikit-learn Scikit-learn integrates machine learning algorithms in the tightly-knit scientific Python world, building upon numpy, scipy, and matplotlib. As a machine-learning module, it provides versatile tools for data mining and analysis in any field of science and engineering. It strives to be simple and efficient, accessible to everybody, and reusable in various contexts. @@ -71,3 +75,6 @@ version | versionsuffix | toolchain ``1.3.2`` | | ``gfbf/2023b`` ``1.4.0`` | | ``gfbf/2023b`` ``1.4.2`` | | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scikit-lego.md b/docs/version-specific/supported-software/s/scikit-lego.md index 451d8b248..1f335de2e 100644 --- a/docs/version-specific/supported-software/s/scikit-lego.md +++ b/docs/version-specific/supported-software/s/scikit-lego.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scikit-lego We love scikit learn but very often we find ourselves writing custom transformers, metrics and models. The goal of this project is to attempt to consolidate these into a package that offers code quality/testing. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.6.16`` | ``foss/2022a`` ``0.7.4`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scikit-misc.md b/docs/version-specific/supported-software/s/scikit-misc.md index 484fdcb74..7f25a5879 100644 --- a/docs/version-specific/supported-software/s/scikit-misc.md +++ b/docs/version-specific/supported-software/s/scikit-misc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scikit-misc Miscellaneous tools for data analysis and scientific computing @@ -9,3 +13,6 @@ version | toolchain ``0.1.4`` | ``foss/2021a`` ``0.1.4`` | ``foss/2022a`` ``0.3.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scikit-multilearn.md b/docs/version-specific/supported-software/s/scikit-multilearn.md index 520e1df38..27ef76015 100644 --- a/docs/version-specific/supported-software/s/scikit-multilearn.md +++ b/docs/version-specific/supported-software/s/scikit-multilearn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scikit-multilearn Scikit-multilearn is a BSD-licensed library for multi-label classification that is built on top of the well-known scikit-learn ecosystem. @@ -7,3 +11,6 @@ Scikit-multilearn is a BSD-licensed library for multi-label classification that version | versionsuffix | toolchain --------|---------------|---------- ``0.2.0`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scikit-optimize.md b/docs/version-specific/supported-software/s/scikit-optimize.md index ca6cd656d..ddb0c8f67 100644 --- a/docs/version-specific/supported-software/s/scikit-optimize.md +++ b/docs/version-specific/supported-software/s/scikit-optimize.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scikit-optimize Scikit-Optimize, or skopt, is a simple and efficient library to minimize (very) expensive and noisy black-box functions. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.8.1`` | ``-Python-3.8.2`` | ``foss/2020a`` ``0.9.0`` | | ``foss/2021a`` ``0.9.0`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scikit-plot.md b/docs/version-specific/supported-software/s/scikit-plot.md index f7b5b2342..434876463 100644 --- a/docs/version-specific/supported-software/s/scikit-plot.md +++ b/docs/version-specific/supported-software/s/scikit-plot.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scikit-plot Scikit-plot is the result of an unartistic data scientist's dreadful realization that *visualization is one of the most crucial components in the data science process, not just a mere afterthought*. @@ -7,3 +11,6 @@ Scikit-plot is the result of an unartistic data scientist's dreadful realization version | toolchain --------|---------- ``0.3.7`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scikit-uplift.md b/docs/version-specific/supported-software/s/scikit-uplift.md index a008ae68f..834739b6a 100644 --- a/docs/version-specific/supported-software/s/scikit-uplift.md +++ b/docs/version-specific/supported-software/s/scikit-uplift.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scikit-uplift scikit-uplift is a Python module for classic approaches for uplift modeling built on top of scikit-learn. Uplift prediction aims to estimate the causal impact of a treatment at the individual level. @@ -7,3 +11,6 @@ scikit-uplift is a Python module for classic approaches for uplift modeling buil version | versionsuffix | toolchain --------|---------------|---------- ``0.2.0`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scipy.md b/docs/version-specific/supported-software/s/scipy.md index b0f496d77..a34c6d1fa 100644 --- a/docs/version-specific/supported-software/s/scipy.md +++ b/docs/version-specific/supported-software/s/scipy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scipy SciPy is a collection of mathematical algorithms and convenience functions built on the Numpy extension for Python. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.19.0`` | ``-Python-3.5.2`` | ``intel/2016b`` ``1.4.1`` | ``-Python-3.7.4`` | ``foss/2019b`` ``1.4.1`` | ``-Python-3.7.4`` | ``fosscuda/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scp.md b/docs/version-specific/supported-software/s/scp.md index 1fff0ff17..eec5aaaee 100644 --- a/docs/version-specific/supported-software/s/scp.md +++ b/docs/version-specific/supported-software/s/scp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scp The scp.py module uses a paramiko transport to send and recieve files via the scp1 protocol. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.10.2`` | ``-Python-2.7.12`` | ``intel/2016b`` ``0.13.1`` | ``-Python-2.7.15`` | ``intel/2018b`` ``0.13.2`` | ``-Python-2.7.15`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scrublet.md b/docs/version-specific/supported-software/s/scrublet.md index 0fbff48ba..ae4d181cd 100644 --- a/docs/version-specific/supported-software/s/scrublet.md +++ b/docs/version-specific/supported-software/s/scrublet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scrublet Single-Cell Remover of Doublets - Python code for identifying doublets in single-cell RNA-seq data @@ -7,3 +11,6 @@ Single-Cell Remover of Doublets - Python code for identifying doublets in single version | toolchain --------|---------- ``0.2.3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/scvi-tools.md b/docs/version-specific/supported-software/s/scvi-tools.md index f68d4d9f9..d28609a12 100644 --- a/docs/version-specific/supported-software/s/scvi-tools.md +++ b/docs/version-specific/supported-software/s/scvi-tools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # scvi-tools scvi-tools (single-cell variational inference tools) is a package for probabilistic modeling and analysis of single-cell omics data, built on top of PyTorch and AnnData. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.16.4`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``0.16.4`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/segemehl.md b/docs/version-specific/supported-software/s/segemehl.md index 0ec74a4bc..c259b2238 100644 --- a/docs/version-specific/supported-software/s/segemehl.md +++ b/docs/version-specific/supported-software/s/segemehl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # segemehl segemehl is a software to map short sequencer reads to reference genomes. Unlike other methods, segemehl is able to detect not only mismatches but also insertions and deletions. Furthermore, segemehl is not limited to a specific read length and is able to mapprimer- or polyadenylation contaminated reads correctly. segemehl implements a matching strategy based on enhanced suffix arrays (ESA). Segemehl now supports the SAM format, reads gziped queries to save both disk and memory space and allows bisulfite sequencing mapping and split read mapping. @@ -15,3 +19,6 @@ version | toolchain ``0.3.4`` | ``GCC/8.3.0`` ``0.3.4`` | ``foss/2018b`` ``0.3.4`` | ``iccifort/2020.4.304`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/segment-anything.md b/docs/version-specific/supported-software/s/segment-anything.md index 09e12061b..58d8b0334 100644 --- a/docs/version-specific/supported-software/s/segment-anything.md +++ b/docs/version-specific/supported-software/s/segment-anything.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # segment-anything The Segment Anything Model (SAM) produces high quality object masks from input prompts such as points or boxes, and it can be used to generate masks for all objects in an image. It has been trained on a dataset of 11 million images and 1.1 billion masks, and has strong zero-shot performance on a variety of segmentation tasks. @@ -7,3 +11,6 @@ The Segment Anything Model (SAM) produces high quality object masks from input p version | toolchain --------|---------- ``1.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/segmentation-models-pytorch.md b/docs/version-specific/supported-software/s/segmentation-models-pytorch.md index 863af866b..80acd4861 100644 --- a/docs/version-specific/supported-software/s/segmentation-models-pytorch.md +++ b/docs/version-specific/supported-software/s/segmentation-models-pytorch.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # segmentation-models-pytorch Python library with Neural Networks for Image Segmentation based on PyTorch. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.3.3`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.3.3`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/segmentation-models.md b/docs/version-specific/supported-software/s/segmentation-models.md index de0b6161c..361c70d8f 100644 --- a/docs/version-specific/supported-software/s/segmentation-models.md +++ b/docs/version-specific/supported-software/s/segmentation-models.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # segmentation-models Python library with Neural Networks for Image Segmentation based on Keras and TensorFlow. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.0.1`` | ``-Python-3.7.4`` | ``foss/2019b`` ``1.0.1`` | ``-Python-3.7.4`` | ``fosscuda/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/semla.md b/docs/version-specific/supported-software/s/semla.md index db6a1ecad..b45a68c0e 100644 --- a/docs/version-specific/supported-software/s/semla.md +++ b/docs/version-specific/supported-software/s/semla.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # semla R interface to the Apache Arrow C++ library @@ -7,3 +11,6 @@ R interface to the Apache Arrow C++ library version | versionsuffix | toolchain --------|---------------|---------- ``1.1.6`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sentinelsat.md b/docs/version-specific/supported-software/s/sentinelsat.md index 026d84662..d1a5dd47c 100644 --- a/docs/version-specific/supported-software/s/sentinelsat.md +++ b/docs/version-specific/supported-software/s/sentinelsat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sentinelsat Sentinelsat makes searching, downloading and retrieving the metadata of Sentinel satellite images from the Copernicus Open Access Hub easy. @@ -7,3 +11,6 @@ Sentinelsat makes searching, downloading and retrieving the metadata of Sentinel version | toolchain --------|---------- ``1.2.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sep.md b/docs/version-specific/supported-software/s/sep.md index e03d38101..4f389274e 100644 --- a/docs/version-specific/supported-software/s/sep.md +++ b/docs/version-specific/supported-software/s/sep.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sep Python and C library for Source Extraction and Photometry. (this easyconfig provides python library only) @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.0.3`` | ``-Python-2.7.15`` | ``foss/2018b`` ``1.0.3`` | ``-Python-2.7.15`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/seq2HLA.md b/docs/version-specific/supported-software/s/seq2HLA.md index a8ddfe9b5..c718ab15c 100644 --- a/docs/version-specific/supported-software/s/seq2HLA.md +++ b/docs/version-specific/supported-software/s/seq2HLA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # seq2HLA In-silico method written in Python and R to determine HLA genotypes of a sample. seq2HLA takes standard RNA-Seq sequence reads in fastq format as input, uses a bowtie index comprising all HLA alleles and outputs the most likely HLA class I and class II genotypes (in 4 digit resolution), a p-value for each call, and the expression of each class. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.3`` | ``-Python-2.7.15`` | ``foss/2018b`` ``2.3`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/seqtk.md b/docs/version-specific/supported-software/s/seqtk.md index c167bbeaf..dc2af3069 100644 --- a/docs/version-specific/supported-software/s/seqtk.md +++ b/docs/version-specific/supported-software/s/seqtk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # seqtk Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format. It seamlessly parses both FASTA and FASTQ files which can also be optionally compressed by gzip. @@ -19,3 +23,6 @@ version | toolchain ``1.3`` | ``foss/2018b`` ``1.4`` | ``GCC/12.2.0`` ``1.4`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/setuptools-rust.md b/docs/version-specific/supported-software/s/setuptools-rust.md index fde3c5b00..542a42711 100644 --- a/docs/version-specific/supported-software/s/setuptools-rust.md +++ b/docs/version-specific/supported-software/s/setuptools-rust.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # setuptools-rust setuptools-rust is a plugin for setuptools to build Rust Python extensions implemented with PyO3 or rust-cpython. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.6.0`` | ``GCCcore/12.3.0`` ``1.8.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/setuptools.md b/docs/version-specific/supported-software/s/setuptools.md index f28353eb7..e16aed8c1 100644 --- a/docs/version-specific/supported-software/s/setuptools.md +++ b/docs/version-specific/supported-software/s/setuptools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # setuptools Download, build, install, upgrade, and uninstall Python packages -- easily! @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.4.2`` | | ``system`` ``41.0.1`` | ``-py3`` | ``system`` ``64.0.3`` | | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sf.md b/docs/version-specific/supported-software/s/sf.md index edd1561b5..3835764a3 100644 --- a/docs/version-specific/supported-software/s/sf.md +++ b/docs/version-specific/supported-software/s/sf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sf Support for simple features, a standardized way to encode spatial vector data. Binds to GDAL for reading and writing data, to GEOS for geometrical operations, and to PROJ for projection conversions and datum transformations. @@ -7,3 +11,6 @@ Support for simple features, a standardized way to encode spatial vector data. B version | versionsuffix | toolchain --------|---------------|---------- ``0.9-5`` | ``-R-4.0.0-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sfftk.md b/docs/version-specific/supported-software/s/sfftk.md index 93428178f..fabafc7c5 100644 --- a/docs/version-specific/supported-software/s/sfftk.md +++ b/docs/version-specific/supported-software/s/sfftk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sfftk sfftk is a set of utilities that facilitate creation, conversion and modification of Electron Microscopy Data Bank - Segmentation File Format (EMDB-SFF) files. EMDB-SFF is an open, community-driven file format to handle annotated segmentations and subtomogram averages that facilitates segmentation file interchange. It is written in Python and provides both a command-line suite of commands and a Python API. @@ -7,3 +11,6 @@ sfftk is a set of utilities that facilitate creation, conversion and version | toolchain --------|---------- ``0.7.4`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/shapAAR.md b/docs/version-specific/supported-software/s/shapAAR.md index 713a280ee..71b10fbc4 100644 --- a/docs/version-specific/supported-software/s/shapAAR.md +++ b/docs/version-specific/supported-software/s/shapAAR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # shapAAR An R package for the extraction, analysis and classification of (not only) archaeological objects from scanned images. @@ -7,3 +11,6 @@ An R package for the extraction, analysis and classification of (not only) archa version | versionsuffix | toolchain --------|---------------|---------- ``0.1.0-20180425`` | ``-R-3.6.0`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sharutils.md b/docs/version-specific/supported-software/s/sharutils.md index a4cb24b42..297bebb43 100644 --- a/docs/version-specific/supported-software/s/sharutils.md +++ b/docs/version-specific/supported-software/s/sharutils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sharutils GNU shar makes so-called shell archives out of many files, preparing them for transmission by electronic mail services, while unshar helps unpacking shell archives after reception. @@ -7,3 +11,6 @@ GNU shar makes so-called shell archives out of many files, preparing them for tr version | toolchain --------|---------- ``4.15`` | ``GCCcore/6.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/shift.md b/docs/version-specific/supported-software/s/shift.md index 4ef3fa84a..a3a528ef6 100644 --- a/docs/version-specific/supported-software/s/shift.md +++ b/docs/version-specific/supported-software/s/shift.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # shift Shift is a framework for Self-Healing Independent File Transfer that provides high performance and resilience for local and remote transfers through a variety of techniques. @@ -7,3 +11,6 @@ Shift is a framework for Self-Healing Independent File Transfer that provides hi version | toolchain --------|---------- ``4.0`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/shovill.md b/docs/version-specific/supported-software/s/shovill.md index 5cf0a5d9f..331ee6d45 100644 --- a/docs/version-specific/supported-software/s/shovill.md +++ b/docs/version-specific/supported-software/s/shovill.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # shovill Faster SPAdes assembly of Illumina reads @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.9.0`` | ``-Python-2.7.14`` | ``foss/2018a`` ``1.0.4`` | ``-Python-2.7.15`` | ``foss/2018b`` ``1.1.0`` | | ``gompi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/shrinkwrap.md b/docs/version-specific/supported-software/s/shrinkwrap.md index 0cb26b10c..506520e6a 100644 --- a/docs/version-specific/supported-software/s/shrinkwrap.md +++ b/docs/version-specific/supported-software/s/shrinkwrap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # shrinkwrap A std::streambuf wrapper for compression formats. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.0-beta`` | ``GCCcore/8.2.0`` ``1.1.0`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sickle.md b/docs/version-specific/supported-software/s/sickle.md index 5f569be1e..abd0293bb 100644 --- a/docs/version-specific/supported-software/s/sickle.md +++ b/docs/version-specific/supported-software/s/sickle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sickle Windowed Adaptive Trimming for fastq files using quality @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.33`` | ``foss/2017a`` ``1.33`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/silhouetteRank.md b/docs/version-specific/supported-software/s/silhouetteRank.md index 9938638d9..add5deae2 100644 --- a/docs/version-specific/supported-software/s/silhouetteRank.md +++ b/docs/version-specific/supported-software/s/silhouetteRank.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # silhouetteRank silhouetteRank is a tool for finding spatially variable genes based on computing silhouette coefficient from binarized spatial gene expression data @@ -7,3 +11,6 @@ silhouetteRank is a tool for finding spatially variable genes based on computing version | toolchain --------|---------- ``1.0.5.13`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/silx.md b/docs/version-specific/supported-software/s/silx.md index 1211f177c..50fd51333 100644 --- a/docs/version-specific/supported-software/s/silx.md +++ b/docs/version-specific/supported-software/s/silx.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # silx The silx project provides a collection of Python packages to support the development of data assessment, reduction and analysis applications at synchrotron radiation facilities. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.14.0`` | | ``foss/2020b`` ``0.14.0`` | | ``fosscuda/2020b`` ``1.0.0`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/simanneal.md b/docs/version-specific/supported-software/s/simanneal.md index ba00aa26f..e8e6640b0 100644 --- a/docs/version-specific/supported-software/s/simanneal.md +++ b/docs/version-specific/supported-software/s/simanneal.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # simanneal This module performs simulated annealing optimization to find the optimal state of a system. It is inspired by the metallurgic process of annealing whereby metals must be cooled at a regular schedule in order to settle into their lowest energy state. @@ -7,3 +11,6 @@ This module performs simulated annealing optimization to find the optimal state version | toolchain --------|---------- ``0.5.0`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/simint.md b/docs/version-specific/supported-software/s/simint.md index 45cbe7384..ae174a1f7 100644 --- a/docs/version-specific/supported-software/s/simint.md +++ b/docs/version-specific/supported-software/s/simint.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # simint Simint is a vectorized implementation of the Obara-Saika (OS) method of calculating electron repulsion integrals. Speedup is gained by vectorizing the primitive loop of the OS algorithm, with additional vectorization and optimizations left to the compiler. @@ -7,3 +11,6 @@ Simint is a vectorized implementation of the Obara-Saika (OS) method of calcula version | versionsuffix | toolchain --------|---------------|---------- ``0.7`` | ``-lmax-5-vec-avx-psi4`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/simpy.md b/docs/version-specific/supported-software/s/simpy.md index 65f55d3e8..bec77b3de 100644 --- a/docs/version-specific/supported-software/s/simpy.md +++ b/docs/version-specific/supported-software/s/simpy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # simpy SimPy is a process-based discrete-event simulation framework based on standard Python. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.0.11`` | ``-Python-3.6.6`` | ``intel/2018b`` ``3.0.11`` | | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sinto.md b/docs/version-specific/supported-software/s/sinto.md index b320e4a14..028d4451a 100644 --- a/docs/version-specific/supported-software/s/sinto.md +++ b/docs/version-specific/supported-software/s/sinto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sinto Sinto is a toolkit for processing aligned single-cell data. @@ -7,3 +11,6 @@ Sinto is a toolkit for processing aligned single-cell data. version | toolchain --------|---------- ``0.7.4`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/siscone.md b/docs/version-specific/supported-software/s/siscone.md index e611c6520..5dd820a17 100644 --- a/docs/version-specific/supported-software/s/siscone.md +++ b/docs/version-specific/supported-software/s/siscone.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # siscone Hadron Seedless Infrared-Safe Cone jet algorithm @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.0.5`` | ``GCCcore/11.3.0`` ``3.0.6`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sketchmap.md b/docs/version-specific/supported-software/s/sketchmap.md index e32b79148..9579c7c95 100644 --- a/docs/version-specific/supported-software/s/sketchmap.md +++ b/docs/version-specific/supported-software/s/sketchmap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sketchmap Sketch-map is a dimensionality reduction algorithm that is particularly well suited to examining the high-dimensionality data that is routinely produced in atomistic simulations. @@ -7,3 +11,6 @@ Sketch-map is a dimensionality reduction algorithm that is particularly well sui version | toolchain --------|---------- ``20170130`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/skewer.md b/docs/version-specific/supported-software/s/skewer.md index e36988126..a7e64531f 100644 --- a/docs/version-specific/supported-software/s/skewer.md +++ b/docs/version-specific/supported-software/s/skewer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # skewer skewer implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS) paired-end sequences. @@ -7,3 +11,6 @@ skewer implements the bit-masked k-difference matching algorithm dedicated to th version | toolchain --------|---------- ``0.2.2`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sklearn-pandas.md b/docs/version-specific/supported-software/s/sklearn-pandas.md index b8e834d78..ee307402d 100644 --- a/docs/version-specific/supported-software/s/sklearn-pandas.md +++ b/docs/version-specific/supported-software/s/sklearn-pandas.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sklearn-pandas This module provides a bridge between Scikit-Learn's machine learning methods and pandas-style Data Frames. In particular, it provides a way to map DataFrame columns to transformations, which are later recombined into features. @@ -7,3 +11,6 @@ This module provides a bridge between Scikit-Learn's machine learning methods an version | toolchain --------|---------- ``2.2.0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sklearn-som.md b/docs/version-specific/supported-software/s/sklearn-som.md index 806a9aef3..70a5ac11b 100644 --- a/docs/version-specific/supported-software/s/sklearn-som.md +++ b/docs/version-specific/supported-software/s/sklearn-som.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sklearn-som A simple, planar self-organizing map with methods similar to clustering methods in Scikit Learn. @@ -7,3 +11,6 @@ A simple, planar self-organizing map with methods similar to clustering methods version | toolchain --------|---------- ``1.1.0`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/skorch.md b/docs/version-specific/supported-software/s/skorch.md index e6a5d2ffb..dd983e2d8 100644 --- a/docs/version-specific/supported-software/s/skorch.md +++ b/docs/version-specific/supported-software/s/skorch.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # skorch A scikit-learn compatible neural network library that wraps PyTorch. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.11.0`` | ``-PyTorch-1.10.0`` | ``foss/2021a`` ``0.15.0`` | ``-PyTorch-2.1.2-CUDA-12.1.1`` | ``foss/2023a`` ``0.15.0`` | ``-PyTorch-2.1.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sktime.md b/docs/version-specific/supported-software/s/sktime.md index 1b74d8095..75dd6e45b 100644 --- a/docs/version-specific/supported-software/s/sktime.md +++ b/docs/version-specific/supported-software/s/sktime.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sktime sktime is a library for time series analysis in Python. It provides a unified interface for multiple time series learning tasks. Currently, this includes time series classification, regression, clustering, annotation, and forecasting. It comes with time series algorithms and scikit-learn compatible tools to build, tune and validate time series models. @@ -7,3 +11,6 @@ sktime is a library for time series analysis in Python. It provides a unified in version | toolchain --------|---------- ``0.25.0`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/slepc4py.md b/docs/version-specific/supported-software/s/slepc4py.md index 2bbc166bf..5bf13fcee 100644 --- a/docs/version-specific/supported-software/s/slepc4py.md +++ b/docs/version-specific/supported-software/s/slepc4py.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # slepc4py Python bindings for SLEPc, the Scalable Library for Eigenvalue Problem Computations. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``3.12.0`` | ``-Python-3.7.4`` | ``foss/2019b`` ``3.15.1`` | | ``foss/2021a`` ``3.9.0`` | ``-Python-3.6.4`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sleuth.md b/docs/version-specific/supported-software/s/sleuth.md index 3fe57af35..30a978122 100644 --- a/docs/version-specific/supported-software/s/sleuth.md +++ b/docs/version-specific/supported-software/s/sleuth.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sleuth Investigate RNA-Seq transcript abundance from kallisto and perform differential expression analysis. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.29.0`` | ``-R-3.4.0`` | ``intel/2017a`` ``0.30.0`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/slidingwindow.md b/docs/version-specific/supported-software/s/slidingwindow.md index 4b54c3c38..699265c14 100644 --- a/docs/version-specific/supported-software/s/slidingwindow.md +++ b/docs/version-specific/supported-software/s/slidingwindow.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # slidingwindow slidingwindow is a simple little Python library for computing a set of windows into a larger dataset, designed for use with image-processing algorithms that utilise a sliding window to break the processing up into a series of smaller chunks. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.0.13`` | ``-Python-2.7.15`` | ``intel/2018b`` ``0.0.13`` | ``-Python-3.6.6`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/slow5tools.md b/docs/version-specific/supported-software/s/slow5tools.md index d2efa9ba0..6640b293c 100644 --- a/docs/version-specific/supported-software/s/slow5tools.md +++ b/docs/version-specific/supported-software/s/slow5tools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # slow5tools slow5tools is a toolkit for converting (FAST5 <-> SLOW5), compressing, viewing, indexing and manipulating data in SLOW5 format. @@ -7,3 +11,6 @@ slow5tools is a toolkit for converting (FAST5 <-> SLOW5), compressing, viewing, version | toolchain --------|---------- ``0.4.0`` | ``gompi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/slurm-drmaa.md b/docs/version-specific/supported-software/s/slurm-drmaa.md index 5ab30dd92..5cb8b5c0a 100644 --- a/docs/version-specific/supported-software/s/slurm-drmaa.md +++ b/docs/version-specific/supported-software/s/slurm-drmaa.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # slurm-drmaa DRMAA for Slurm Workload Manager (Slurm) is an implementation of Open Grid Forum Distributed Resource Management Application API (DRMAA) version 1 for submission and control of jobs to Slurm. Using DRMAA, grid applications builders, portal developers and ISVs can use the same high-level API to link their software with different cluster/resource management systems. @@ -7,3 +11,6 @@ DRMAA for Slurm Workload Manager (Slurm) is an implementation of Open Grid Foru version | toolchain --------|---------- ``1.1.3`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/smafa.md b/docs/version-specific/supported-software/s/smafa.md index 5540ec17e..3adad56bd 100644 --- a/docs/version-specific/supported-software/s/smafa.md +++ b/docs/version-specific/supported-software/s/smafa.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # smafa Smafa attempts to align or cluster pre-aligned biological sequences, handling sequences which are all the same length. @@ -7,3 +11,6 @@ Smafa attempts to align or cluster pre-aligned biological sequences, handling se version | toolchain --------|---------- ``0.4.0`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/smallgenomeutilities.md b/docs/version-specific/supported-software/s/smallgenomeutilities.md index a5d7e48ba..9a6d9aaa0 100644 --- a/docs/version-specific/supported-software/s/smallgenomeutilities.md +++ b/docs/version-specific/supported-software/s/smallgenomeutilities.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # smallgenomeutilities The smallgenomeutilities are a collection of scripts that is useful for dealing and manipulating NGS data of small viral genomes. They are written in Python 3 with a small number of dependencies. @@ -7,3 +11,6 @@ The smallgenomeutilities are a collection of scripts that is useful for dealing version | versionsuffix | toolchain --------|---------------|---------- ``0.2.1`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/smfishHmrf.md b/docs/version-specific/supported-software/s/smfishHmrf.md index d14febf3e..2d4296f1a 100644 --- a/docs/version-specific/supported-software/s/smfishHmrf.md +++ b/docs/version-specific/supported-software/s/smfishHmrf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # smfishHmrf smFish spatial pattern mining and cell type prediction @@ -7,3 +11,6 @@ smFish spatial pattern mining and cell type prediction version | toolchain --------|---------- ``1.3.3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/smithwaterman.md b/docs/version-specific/supported-software/s/smithwaterman.md index 7bd9e41b7..b7aa010c4 100644 --- a/docs/version-specific/supported-software/s/smithwaterman.md +++ b/docs/version-specific/supported-software/s/smithwaterman.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # smithwaterman smith-waterman-gotoh alignment algorithm. @@ -12,3 +16,6 @@ version | toolchain ``20160702`` | ``GCCcore/11.3.0`` ``20160702`` | ``GCCcore/12.3.0`` ``20160702`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/smooth-topk.md b/docs/version-specific/supported-software/s/smooth-topk.md index 706267da2..a86ab948b 100644 --- a/docs/version-specific/supported-software/s/smooth-topk.md +++ b/docs/version-specific/supported-software/s/smooth-topk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # smooth-topk Smooth Loss Functions for Deep Top-k Classification @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.0-20210817`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``1.0-20210817`` | | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/snakemake.md b/docs/version-specific/supported-software/s/snakemake.md index 8b8ecf218..afdf334f3 100644 --- a/docs/version-specific/supported-software/s/snakemake.md +++ b/docs/version-specific/supported-software/s/snakemake.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # snakemake The Snakemake workflow management system is a tool to create reproducible and scalable data analyses. @@ -18,3 +22,6 @@ version | versionsuffix | toolchain ``7.22.0`` | | ``foss/2022a`` ``7.32.3`` | | ``foss/2022b`` ``8.4.2`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/snaphu.md b/docs/version-specific/supported-software/s/snaphu.md index a212add0a..ced0432e2 100644 --- a/docs/version-specific/supported-software/s/snaphu.md +++ b/docs/version-specific/supported-software/s/snaphu.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # snaphu SNAPHU is an implementation of the Statistical-cost, Network-flow Algorithm for Phase Unwrapping proposed by Chen and Zebker @@ -9,3 +13,6 @@ version | toolchain ``1.4.2`` | ``GCCcore/6.3.0`` ``1.4.2`` | ``intel/2016b`` ``1.4.2`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/snappy.md b/docs/version-specific/supported-software/s/snappy.md index e552b1ae1..f5a78447b 100644 --- a/docs/version-specific/supported-software/s/snappy.md +++ b/docs/version-specific/supported-software/s/snappy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # snappy Snappy is a compression/decompression library. It does not aim for maximum compression, or compatibility with any other compression library; instead, it aims for very high speeds and reasonable compression. @@ -24,3 +28,6 @@ version | toolchain ``1.1.9`` | ``GCCcore/11.2.0`` ``1.1.9`` | ``GCCcore/11.3.0`` ``1.1.9`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/snippy.md b/docs/version-specific/supported-software/s/snippy.md index 1219252a7..7daa9ca8f 100644 --- a/docs/version-specific/supported-software/s/snippy.md +++ b/docs/version-specific/supported-software/s/snippy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # snippy Snippy finds SNPs between a haploid reference genome and your NGS sequence reads. It will find both substitutions (snps) and insertions/deletions (indels). Rapid haploid variant calling and core genome alignment. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``4.6.0`` | | ``GCC/10.2.0`` ``4.6.0`` | ``-Java-13-Python-3.8.2`` | ``GCC/9.3.0`` ``4.6.0`` | ``-R-4.1.2`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/snp-sites.md b/docs/version-specific/supported-software/s/snp-sites.md index d12faa3e1..1329fd95d 100644 --- a/docs/version-specific/supported-software/s/snp-sites.md +++ b/docs/version-specific/supported-software/s/snp-sites.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # snp-sites Finds SNP sites from a multi-FASTA alignment file. @@ -10,3 +14,6 @@ version | toolchain ``2.5.1`` | ``GCCcore/10.3.0`` ``2.5.1`` | ``GCCcore/11.2.0`` ``2.5.1`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/snpEff.md b/docs/version-specific/supported-software/s/snpEff.md index 9a807ebde..0f59a533d 100644 --- a/docs/version-specific/supported-software/s/snpEff.md +++ b/docs/version-specific/supported-software/s/snpEff.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # snpEff SnpEff is a variant annotation and effect prediction tool. It annotates and predicts the effects of genetic variants (such as amino acid changes). @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``5.0`` | ``-Java-13`` | ``system`` ``5.0e`` | ``-Java-13`` | ``GCCcore/10.2.0`` ``5.0e`` | ``-Java-11`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/socat.md b/docs/version-specific/supported-software/s/socat.md index 954719b83..d6ecfc536 100644 --- a/docs/version-specific/supported-software/s/socat.md +++ b/docs/version-specific/supported-software/s/socat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # socat socat is a relay for bidirectional data transfer between two independent data channels. @@ -7,3 +11,6 @@ socat is a relay for bidirectional data transfer between two independent data ch version | toolchain --------|---------- ``1.7.3.3`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/solo.md b/docs/version-specific/supported-software/s/solo.md index 93b031dbe..94673d630 100644 --- a/docs/version-specific/supported-software/s/solo.md +++ b/docs/version-specific/supported-software/s/solo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # solo Doublet detection via semi-supervised deep learning @@ -7,3 +11,6 @@ Doublet detection via semi-supervised deep learning version | toolchain --------|---------- ``1.3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sonic.md b/docs/version-specific/supported-software/s/sonic.md index d20e543cb..15acdb852 100644 --- a/docs/version-specific/supported-software/s/sonic.md +++ b/docs/version-specific/supported-software/s/sonic.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sonic Sonic is a simple algorithm for speeding up or slowing down speech. However, it's optimized for speed ups of over 2X, unlike previous algorithms for changing speech rate. The Sonic library is a very simple ANSI C library that is designed to easily be integrated into streaming voice applications, like TTS back ends. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20180202`` | ``gfbf/2023a`` ``20180202`` | ``gompi/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/spaCy.md b/docs/version-specific/supported-software/s/spaCy.md index 1f8b8b961..0e175aad7 100644 --- a/docs/version-specific/supported-software/s/spaCy.md +++ b/docs/version-specific/supported-software/s/spaCy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # spaCy Industrial-strength Natural Language Processing (NLP) in Python. @@ -7,3 +11,6 @@ Industrial-strength Natural Language Processing (NLP) in Python. version | toolchain --------|---------- ``3.4.4`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/spaln.md b/docs/version-specific/supported-software/s/spaln.md index 547351693..c87cf72d3 100644 --- a/docs/version-specific/supported-software/s/spaln.md +++ b/docs/version-specific/supported-software/s/spaln.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # spaln Spaln (space-efficient spliced alignment) is a stand-alone program that maps and aligns a set of cDNA or protein sequences onto a whole genomic sequence in a single job. @@ -11,3 +15,6 @@ version | toolchain ``2.4.12`` | ``GCC/10.2.0`` ``2.4.12`` | ``GCC/11.2.0`` ``2.4.13f`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sparse-neighbors-search.md b/docs/version-specific/supported-software/s/sparse-neighbors-search.md index 44ffcfa94..3b234e764 100644 --- a/docs/version-specific/supported-software/s/sparse-neighbors-search.md +++ b/docs/version-specific/supported-software/s/sparse-neighbors-search.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sparse-neighbors-search A Python/C++ implementation of an approximate nearest neighbor search for sparse data structures based on the idea of local sensitive hash functions. @@ -7,3 +11,6 @@ A Python/C++ implementation of an approximate nearest neighbor search for sparse version | toolchain --------|---------- ``0.7`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sparsehash.md b/docs/version-specific/supported-software/s/sparsehash.md index a856bec72..c0704cc60 100644 --- a/docs/version-specific/supported-software/s/sparsehash.md +++ b/docs/version-specific/supported-software/s/sparsehash.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sparsehash An extremely memory-efficient hash_map implementation. 2 bits/entry overhead! The SparseHash library contains several hash-map implementations, including implementations that optimize for space or speed. @@ -18,3 +22,6 @@ version | toolchain ``2.0.4`` | ``GCCcore/11.3.0`` ``2.0.4`` | ``GCCcore/12.3.0`` ``2.0.4`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/spatialreg.md b/docs/version-specific/supported-software/s/spatialreg.md index 7e40b0b6f..aee352e7c 100644 --- a/docs/version-specific/supported-software/s/spatialreg.md +++ b/docs/version-specific/supported-software/s/spatialreg.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # spatialreg A collection of all the estimation functions for spatial cross-sectional models (on lattice/areal data using spatial weights matrices) contained up to now in 'spdep', 'sphet' and 'spse'. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.1-5`` | ``-R-3.6.2`` | ``foss/2019b`` ``1.1-8`` | ``-R-4.1.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/spdlog.md b/docs/version-specific/supported-software/s/spdlog.md index 12cfc9ea9..b432f3525 100644 --- a/docs/version-specific/supported-software/s/spdlog.md +++ b/docs/version-specific/supported-software/s/spdlog.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # spdlog Very fast, header-only/compiled, C++ logging library. @@ -11,3 +15,6 @@ version | toolchain ``1.11.0`` | ``GCCcore/12.3.0`` ``1.12.0`` | ``GCCcore/13.2.0`` ``1.9.2`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/spectral.methods.md b/docs/version-specific/supported-software/s/spectral.methods.md index 681ad1652..f70f4af87 100644 --- a/docs/version-specific/supported-software/s/spectral.methods.md +++ b/docs/version-specific/supported-software/s/spectral.methods.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # spectral.methods Contains some implementations of Singular Spectrum Analysis (SSA) for the gapfilling and spectral decomposition of time series. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.7.2.133`` | ``-R-3.4.3`` | ``intel/2017b`` ``0.7.2.133`` | ``-R-3.4.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/speech_tools.md b/docs/version-specific/supported-software/s/speech_tools.md index 5a91421a4..df8ab5d48 100644 --- a/docs/version-specific/supported-software/s/speech_tools.md +++ b/docs/version-specific/supported-software/s/speech_tools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # speech_tools The Edinburgh Speech Tools Library is a collection of C++ class, functions and related programs for manipulating the sorts of objects used in speech processing. It includes support for reading and writing waveforms, parameter files (LPC, Ceptra, F0) in various formats and converting between them. It also includes support for linguistic type objects and support for various label files and ngrams (with smoothing). @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.5.0`` | ``GCCcore/12.3.0`` ``2.5.0`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/spektral.md b/docs/version-specific/supported-software/s/spektral.md index 04435e8cf..aba240fa4 100644 --- a/docs/version-specific/supported-software/s/spektral.md +++ b/docs/version-specific/supported-software/s/spektral.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # spektral Spektral is a Python library for graph deep learning. The main goal of this project is to provide a simple but flexible framework for creating graph neural networks (GNNs). @@ -7,3 +11,6 @@ Spektral is a Python library for graph deep learning. The main goal of this pro version | versionsuffix | toolchain --------|---------------|---------- ``1.1.0`` | ``-CUDA-11.4.1`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/spglib-python.md b/docs/version-specific/supported-software/s/spglib-python.md index 28658c98c..1300861ed 100644 --- a/docs/version-specific/supported-software/s/spglib-python.md +++ b/docs/version-specific/supported-software/s/spglib-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # spglib-python Spglib for Python. Spglib is a library for finding and handling crystal symmetries written in C. @@ -30,3 +34,6 @@ version | versionsuffix | toolchain ``2.0.2`` | | ``gfbf/2022b`` ``2.1.0`` | | ``gfbf/2023a`` ``2.1.0`` | | ``iimkl/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/spglib.md b/docs/version-specific/supported-software/s/spglib.md index c30391d81..8400c9d75 100644 --- a/docs/version-specific/supported-software/s/spglib.md +++ b/docs/version-specific/supported-software/s/spglib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # spglib Spglib is a C library for finding and handling crystal symmetries. @@ -12,3 +16,6 @@ version | toolchain ``1.9.9`` | ``intel/2017b`` ``2.0.2`` | ``GCCcore/11.3.0`` ``2.0.2`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/split-seq.md b/docs/version-specific/supported-software/s/split-seq.md index d61b21a1d..7d3772181 100644 --- a/docs/version-specific/supported-software/s/split-seq.md +++ b/docs/version-specific/supported-software/s/split-seq.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # split-seq Analysis tools for split-seq. @@ -7,3 +11,6 @@ Analysis tools for split-seq. version | versionsuffix | toolchain --------|---------------|---------- ``20190717`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/splitRef.md b/docs/version-specific/supported-software/s/splitRef.md index 9c555a56a..40ff86257 100644 --- a/docs/version-specific/supported-software/s/splitRef.md +++ b/docs/version-specific/supported-software/s/splitRef.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # splitRef splitRef splits a reference haplotype file into smaller files with subsets of markers. The current version is a pre-release. @@ -7,3 +11,6 @@ splitRef splits a reference haplotype file into smaller files with subsets of version | toolchain --------|---------- ``0.0.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/spoa.md b/docs/version-specific/supported-software/s/spoa.md index 8dff32e76..cc5af7576 100644 --- a/docs/version-specific/supported-software/s/spoa.md +++ b/docs/version-specific/supported-software/s/spoa.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # spoa Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm which is used to generate consensus sequences @@ -15,3 +19,6 @@ version | toolchain ``4.0.7`` | ``GCC/11.3.0`` ``4.0.7`` | ``GCC/12.2.0`` ``4.1.0`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sradownloader.md b/docs/version-specific/supported-software/s/sradownloader.md index c5a1f0b99..ff9e87e9e 100644 --- a/docs/version-specific/supported-software/s/sradownloader.md +++ b/docs/version-specific/supported-software/s/sradownloader.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sradownloader SRAdownloader takes the annotation table from the SRA run selector tool and retrieves the raw fastq files for the selected samples @@ -7,3 +11,6 @@ SRAdownloader takes the annotation table from the SRA run selector tool and ret version | toolchain --------|---------- ``3.9`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/stardist.md b/docs/version-specific/supported-software/s/stardist.md index 9a1154ee0..980a9dd66 100644 --- a/docs/version-specific/supported-software/s/stardist.md +++ b/docs/version-specific/supported-software/s/stardist.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # stardist Object Detection with Star-convex Shapes. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.8.3`` | ``-CUDA-11.4.1`` | ``foss/2021b`` ``0.8.3`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/starparser.md b/docs/version-specific/supported-software/s/starparser.md index 96d9aca69..01368ead7 100644 --- a/docs/version-specific/supported-software/s/starparser.md +++ b/docs/version-specific/supported-software/s/starparser.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # starparser Use this package to manipulate Relion star files, including counting, modifying, plotting, and sifting the data. At the very least, this is a useful alternative to awk commands, which can get awkward. Below is a description of the command- line options with some examples. Alternatively, use starparser within Relion or load the modules in your own Python scripts. @@ -7,3 +11,6 @@ Use this package to manipulate Relion star files, including counting, modifying, version | toolchain --------|---------- ``1.49`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/stars.md b/docs/version-specific/supported-software/s/stars.md index 34282af42..be2841189 100644 --- a/docs/version-specific/supported-software/s/stars.md +++ b/docs/version-specific/supported-software/s/stars.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # stars Reading, manipulating, writing and plotting spatiotemporal arrays (raster and vector data cubes) in R, using GDAL bindings provided by sf, and NetCDF bindings by ncmeta and RNetCDF. @@ -7,3 +11,6 @@ Reading, manipulating, writing and plotting spatiotemporal arrays (raster and ve version | versionsuffix | toolchain --------|---------------|---------- ``0.4-3`` | ``-R-4.0.0-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/statsmodels.md b/docs/version-specific/supported-software/s/statsmodels.md index ec5760593..3b99523df 100644 --- a/docs/version-specific/supported-software/s/statsmodels.md +++ b/docs/version-specific/supported-software/s/statsmodels.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # statsmodels Statsmodels is a Python module that allows users to explore data, estimate statistical models, and perform statistical tests. @@ -30,3 +34,6 @@ version | versionsuffix | toolchain ``0.9.0`` | ``-Python-2.7.15`` | ``intel/2018b`` ``0.9.0`` | ``-Python-3.6.6`` | ``intel/2018b`` ``0.9.0`` | ``-Python-2.7.16`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/stpipeline.md b/docs/version-specific/supported-software/s/stpipeline.md index 62d00c084..2263e95fb 100644 --- a/docs/version-specific/supported-software/s/stpipeline.md +++ b/docs/version-specific/supported-software/s/stpipeline.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # stpipeline The ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method in FASTQ format to generated datasets for down-stream analysis. The ST pipeline can also be used to process single cell data as long as a file with barcodes identifying each cell is provided. The ST Pipeline can also process RNA-Seq datasets generated with or without UMIs. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.7.3`` | ``-Python-2.7.15`` | ``foss/2018b`` ``1.7.6`` | ``-Python-3.7.2`` | ``foss/2019a`` ``1.7.6`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/strace.md b/docs/version-specific/supported-software/s/strace.md index ce5fe8bdc..7c7d96164 100644 --- a/docs/version-specific/supported-software/s/strace.md +++ b/docs/version-specific/supported-software/s/strace.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # strace strace is a diagnostic, debugging and instructional userspace utility for Linux. It is used to monitor and tamper with interactions between processes and the Linux kernel, which include system calls, signal deliveries, and changes of process state. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``5.14`` | ``GCCcore/11.2.0`` ``6.6`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/strelka.md b/docs/version-specific/supported-software/s/strelka.md index edebfa49e..53effeed2 100644 --- a/docs/version-specific/supported-software/s/strelka.md +++ b/docs/version-specific/supported-software/s/strelka.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # strelka Strelka2 is a fast and accurate small variant caller optimized for analysis of germline variation in small cohorts and somatic variation in tumor/normal sample pairs. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.9.10`` | ``-Python-2.7.15`` | ``intel/2018b`` ``2.9.7`` | | ``intel/2018a`` ``2.9.9`` | | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/stripy.md b/docs/version-specific/supported-software/s/stripy.md index ca12ac6ed..e16955e5e 100644 --- a/docs/version-specific/supported-software/s/stripy.md +++ b/docs/version-specific/supported-software/s/stripy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # stripy A Python interface to TRIPACK and STRIPACK Fortran code for (constrained) triangulation in Cartesian coordinates and on a sphere. Stripy is an object-oriented package and includes routines from SRFPACK and SSRFPACK for interpolation (nearest neighbor, linear and hermite cubic) and to evaluate derivatives (Renka 1996a,b and 1997a,b). @@ -7,3 +11,6 @@ A Python interface to TRIPACK and STRIPACK Fortran code for (constrained) triang version | toolchain --------|---------- ``2.1.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/suave.md b/docs/version-specific/supported-software/s/suave.md index 5fe5e7a5e..9441e8072 100644 --- a/docs/version-specific/supported-software/s/suave.md +++ b/docs/version-specific/supported-software/s/suave.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # suave suave is an interactive web application to visualize read depth ratios between two samples and the structural variants of one of the samples (typically the "case" sample in a case/control setup such as tumor/normal comparison). @@ -7,3 +11,6 @@ suave is an interactive web application to visualize read depth ratios between t version | toolchain --------|---------- ``20160529`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/subset-bam.md b/docs/version-specific/supported-software/s/subset-bam.md index 800e7c290..c744961a5 100644 --- a/docs/version-specific/supported-software/s/subset-bam.md +++ b/docs/version-specific/supported-software/s/subset-bam.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # subset-bam subset-bam is a tool to subset a 10x Genomics BAM file based on a tag, most commonly the cell barcode tag. @@ -7,3 +11,6 @@ subset-bam is a tool to subset a 10x Genomics BAM file based on a tag, most com version | toolchain --------|---------- ``1.1.0`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/subunit.md b/docs/version-specific/supported-software/s/subunit.md index 318eac0c0..7a9b7098d 100644 --- a/docs/version-specific/supported-software/s/subunit.md +++ b/docs/version-specific/supported-software/s/subunit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # subunit Subunit is a streaming protocol for test results. @@ -7,3 +11,6 @@ Subunit is a streaming protocol for test results. version | toolchain --------|---------- ``1.4.3`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/suds.md b/docs/version-specific/supported-software/s/suds.md index 50f1669ee..7577d94d4 100644 --- a/docs/version-specific/supported-software/s/suds.md +++ b/docs/version-specific/supported-software/s/suds.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # suds Lightweight SOAP client @@ -7,3 +11,6 @@ Lightweight SOAP client version | versionsuffix | toolchain --------|---------------|---------- ``1.3.3.0`` | ``-Python-3.6.4`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/supermagic.md b/docs/version-specific/supported-software/s/supermagic.md index 880b50aa5..5ce8e4389 100644 --- a/docs/version-specific/supported-software/s/supermagic.md +++ b/docs/version-specific/supported-software/s/supermagic.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # supermagic Very simple MPI sanity code. Nothing more, nothing less. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20170824`` | ``foss/2017a`` ``20170824`` | ``gompi/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/supernova.md b/docs/version-specific/supported-software/s/supernova.md index 36c61d0b3..9ed398b33 100644 --- a/docs/version-specific/supported-software/s/supernova.md +++ b/docs/version-specific/supported-software/s/supernova.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # supernova Supernova is a software package for de novo assembly from Chromium Linked-Reads that are made from a single whole-genome library from an individual DNA source @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.0.1`` | ``system`` ``2.1.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/svist4get.md b/docs/version-specific/supported-software/s/svist4get.md index 5028a31c1..cb7c709d7 100644 --- a/docs/version-specific/supported-software/s/svist4get.md +++ b/docs/version-specific/supported-software/s/svist4get.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # svist4get Svist4get is a simple bioinformatics tool for visualization of genomic signal tracks in user-defined genomic windows, either arbitrary selected by genomic coordinates or anchored to particular transcripts or genes. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.3.1`` | ``foss/2020b`` ``1.3.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/swarm.md b/docs/version-specific/supported-software/s/swarm.md index 827d3231a..9ae9bcfc5 100644 --- a/docs/version-specific/supported-software/s/swarm.md +++ b/docs/version-specific/supported-software/s/swarm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # swarm A robust and fast clustering method for amplicon-based studies @@ -7,3 +11,6 @@ A robust and fast clustering method for amplicon-based studies version | toolchain --------|---------- ``2.2.2`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/swifter.md b/docs/version-specific/supported-software/s/swifter.md index efb762b44..65fe1474a 100644 --- a/docs/version-specific/supported-software/s/swifter.md +++ b/docs/version-specific/supported-software/s/swifter.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # swifter A package which efficiently applies any function to a pandas dataframe or series in the fastest available manner. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.9`` | ``foss/2020b`` ``1.0.9`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/swissknife.md b/docs/version-specific/supported-software/s/swissknife.md index e935a8965..047d6531a 100644 --- a/docs/version-specific/supported-software/s/swissknife.md +++ b/docs/version-specific/supported-software/s/swissknife.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # swissknife Perl module for reading and writing UniProtKB data in plain text format. @@ -7,3 +11,6 @@ Perl module for reading and writing UniProtKB data in plain text format. version | toolchain --------|---------- ``1.80`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sympy.md b/docs/version-specific/supported-software/s/sympy.md index 6303a2472..34eeb936d 100644 --- a/docs/version-specific/supported-software/s/sympy.md +++ b/docs/version-specific/supported-software/s/sympy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sympy SymPy is a Python library for symbolic mathematics. It aims to become a full-featured computer algebra system (CAS) while keeping the code as simple as possible in order to be comprehensible and easily extensible. SymPy is written entirely in Python and does not require any external libraries. @@ -28,3 +32,6 @@ version | versionsuffix | toolchain ``1.8`` | | ``foss/2021a`` ``1.9`` | | ``foss/2021b`` ``1.9`` | | ``intel/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/synapseclient.md b/docs/version-specific/supported-software/s/synapseclient.md index bfd0e73e5..98f3657a6 100644 --- a/docs/version-specific/supported-software/s/synapseclient.md +++ b/docs/version-specific/supported-software/s/synapseclient.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # synapseclient The synapseclient package provides an interface to Synapse, a collaborative, open-source research platform that allows teams to share data, track analyses, and collaborate, providing support for: integrated presentation of data, code and text fine grained access control provenance tracking The synapseclient package lets you communicate with the cloud-hosted Synapse service to access data and create shared data analysis projects from within Python scripts or at the interactive Python console. Other Synapse clients exist for R, Java, and the web. The Python client can also be used from the command line. @@ -7,3 +11,6 @@ The synapseclient package provides an interface to Synapse, a collaborative, ope version | toolchain --------|---------- ``3.0.0`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/synthcity.md b/docs/version-specific/supported-software/s/synthcity.md index a7b31d3a7..8e13fb157 100644 --- a/docs/version-specific/supported-software/s/synthcity.md +++ b/docs/version-specific/supported-software/s/synthcity.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # synthcity A library for generating and evaluating synthetic tabular data. @@ -7,3 +11,6 @@ A library for generating and evaluating synthetic tabular data. version | toolchain --------|---------- ``0.2.4`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/s/sysbench.md b/docs/version-specific/supported-software/s/sysbench.md index 280ec7b19..767c6b768 100644 --- a/docs/version-specific/supported-software/s/sysbench.md +++ b/docs/version-specific/supported-software/s/sysbench.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # sysbench sysbench is a scriptable multi-threaded benchmark tool based on LuaJIT. It is most frequently used for database benchmarks, but can also be used to create arbitrarily complex workloads that do not involve a database server. @@ -7,3 +11,6 @@ sysbench is a scriptable multi-threaded benchmark tool based on LuaJIT. It is m version | toolchain --------|---------- ``1.0.20`` | ``GCC/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/T-Coffee.md b/docs/version-specific/supported-software/t/T-Coffee.md index 41af99f41..a750c543b 100644 --- a/docs/version-specific/supported-software/t/T-Coffee.md +++ b/docs/version-specific/supported-software/t/T-Coffee.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # T-Coffee A collection of tools for Computing, Evaluating and Manipulating Multiple Alignments of DNA, RNA, Protein Sequences and Structures @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``13.45.61.3c310a9`` | ``system`` ``13.46.0.919e8c6b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TALON.md b/docs/version-specific/supported-software/t/TALON.md index a9923aeae..93dff0765 100644 --- a/docs/version-specific/supported-software/t/TALON.md +++ b/docs/version-specific/supported-software/t/TALON.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TALON TALON is a Python package for identifying and quantifying known and novel genes/isoforms in long-read transcriptome data sets. TALON is technology-agnostic in that it works from mapped SAM files, allowing data from different sequencing platforms (i.e. PacBio and Oxford Nanopore) to be analyzed side by side. @@ -7,3 +11,6 @@ TALON is a Python package for identifying and quantifying known and novel genes/ version | toolchain --------|---------- ``5.0`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TALYS.md b/docs/version-specific/supported-software/t/TALYS.md index cc658b335..8bf9a5ca0 100644 --- a/docs/version-specific/supported-software/t/TALYS.md +++ b/docs/version-specific/supported-software/t/TALYS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TALYS TALYS is a nuclear reaction program. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.95`` | ``GCCcore/10.3.0`` ``1.95`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TAMkin.md b/docs/version-specific/supported-software/t/TAMkin.md index 929304d8d..e3d337ab7 100644 --- a/docs/version-specific/supported-software/t/TAMkin.md +++ b/docs/version-specific/supported-software/t/TAMkin.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TAMkin TAMkin is a post-processing toolkit for normal mode analysis, thermochemistry and reaction kinetics. It uses a Hessian computation from a standard computational chemistry program as its input. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``1.2.6`` | | ``foss/2023a`` ``1.2.6`` | ``-Python-3.7.2`` | ``intel/2019a`` ``1.2.6`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TBA.md b/docs/version-specific/supported-software/t/TBA.md index b20cb846d..8bbf4413c 100644 --- a/docs/version-specific/supported-software/t/TBA.md +++ b/docs/version-specific/supported-software/t/TBA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TBA TBA (a Transcription factor Binding Analysis): TBA is a multi-functional machine learning tool for identifying transcription factors associated with genomic features @@ -7,3 +11,6 @@ TBA (a Transcription factor Binding Analysis): TBA is a multi-functional machine version | toolchain --------|---------- ``1.0`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TCC.md b/docs/version-specific/supported-software/t/TCC.md index b60491ecf..a0568e3d2 100644 --- a/docs/version-specific/supported-software/t/TCC.md +++ b/docs/version-specific/supported-software/t/TCC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TCC The Tiny C Compiler (aka TCC, tCc, or TinyCC) is an x86 and x86-64 C compiler created by Fabrice Bellard. It is designed to work for slow computers with little disk space and can run shebang style !/usr/bin/tcc . TCC is distributed under the LGPL. TCC claims to implement all of ANSI C (C89/C90),[1] much of the new ISO C99 standard, and many GNU C extensions including inline assembly. @@ -7,3 +11,6 @@ The Tiny C Compiler (aka TCC, tCc, or TinyCC) is an x86 and x86-64 C compiler c version | toolchain --------|---------- ``0.9.26`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TCLAP.md b/docs/version-specific/supported-software/t/TCLAP.md index ff8b01718..bece63255 100644 --- a/docs/version-specific/supported-software/t/TCLAP.md +++ b/docs/version-specific/supported-software/t/TCLAP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TCLAP TCLAP is a small, flexible library that provides a simple interface for defining and accessing command line arguments. It was intially inspired by the user friendly CLAP libary. @@ -11,3 +15,6 @@ version | toolchain ``1.2.4`` | ``GCCcore/9.3.0`` ``1.2.5`` | ``GCCcore/10.3.0`` ``1.2.5`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TELEMAC-MASCARET.md b/docs/version-specific/supported-software/t/TELEMAC-MASCARET.md index d8bf67b1d..3e1dcb5b3 100644 --- a/docs/version-specific/supported-software/t/TELEMAC-MASCARET.md +++ b/docs/version-specific/supported-software/t/TELEMAC-MASCARET.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TELEMAC-MASCARET TELEMAC-MASCARET is an integrated suite of solvers for use in the field of free-surface flow. Having been used in the context of many studies throughout the world, it has become one of the major standards in its field. @@ -7,3 +11,6 @@ TELEMAC-MASCARET is an integrated suite of solvers for use in the field of free- version | toolchain --------|---------- ``8p3r1`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TEToolkit.md b/docs/version-specific/supported-software/t/TEToolkit.md index d7e54e87d..03a359a90 100644 --- a/docs/version-specific/supported-software/t/TEToolkit.md +++ b/docs/version-specific/supported-software/t/TEToolkit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TEToolkit Tools for estimating differential enrichment of Transposable Elements and other highly repetitive regions @@ -7,3 +11,6 @@ Tools for estimating differential enrichment of Transposable Elements and other version | versionsuffix | toolchain --------|---------------|---------- ``1.5.1`` | ``-Python-2.7.11`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TEtranscripts.md b/docs/version-specific/supported-software/t/TEtranscripts.md index 85fddb3c4..a46e99718 100644 --- a/docs/version-specific/supported-software/t/TEtranscripts.md +++ b/docs/version-specific/supported-software/t/TEtranscripts.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TEtranscripts TEtranscripts and TEcount takes RNA-seq (and similar data) and annotates reads to both genes & transposable elements. TEtranscripts then performs differential analysis using DESeq2. @@ -7,3 +11,6 @@ TEtranscripts and TEcount takes RNA-seq (and similar data) and annotates reads t version | toolchain --------|---------- ``2.2.0`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TF-COMB.md b/docs/version-specific/supported-software/t/TF-COMB.md index 883dedef7..43a959798 100644 --- a/docs/version-specific/supported-software/t/TF-COMB.md +++ b/docs/version-specific/supported-software/t/TF-COMB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TF-COMB Transcription Factor Co-Occurrence using Market Basket analysis. @@ -7,3 +11,6 @@ Transcription Factor Co-Occurrence using Market Basket analysis. version | toolchain --------|---------- ``1.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TFEA.md b/docs/version-specific/supported-software/t/TFEA.md index 2a8375c71..1577f8889 100644 --- a/docs/version-specific/supported-software/t/TFEA.md +++ b/docs/version-specific/supported-software/t/TFEA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TFEA Transcription Factor Enrichment Analysis @@ -7,3 +11,6 @@ Transcription Factor Enrichment Analysis version | versionsuffix | toolchain --------|---------------|---------- ``1.1.4`` | ``-muMerge-1.1.0`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/THetA.md b/docs/version-specific/supported-software/t/THetA.md index dbeda3804..9529d533b 100644 --- a/docs/version-specific/supported-software/t/THetA.md +++ b/docs/version-specific/supported-software/t/THetA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # THetA Tumor Heterogeneity Analysis (THetA) and THetA2 are algorithms that estimate the tumor purity and clonal/subclonal copy number aberrations directly from high-throughput DNA sequencing data. @@ -7,3 +11,6 @@ Tumor Heterogeneity Analysis (THetA) and THetA2 are algorithms that estimate th version | versionsuffix | toolchain --------|---------------|---------- ``0.7`` | ``-Python-2.7.15`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TINKER.md b/docs/version-specific/supported-software/t/TINKER.md index 6ad45368a..505bef068 100644 --- a/docs/version-specific/supported-software/t/TINKER.md +++ b/docs/version-specific/supported-software/t/TINKER.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TINKER The TINKER molecular modeling software is a complete and general package for molecular mechanics and dynamics, with some special features for biopolymers. @@ -9,3 +13,6 @@ version | toolchain ``8.6.1`` | ``foss/2018b`` ``8.7.2`` | ``foss/2019b`` ``8.8.1`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TM-align.md b/docs/version-specific/supported-software/t/TM-align.md index 987e88372..f81e8db06 100644 --- a/docs/version-specific/supported-software/t/TM-align.md +++ b/docs/version-specific/supported-software/t/TM-align.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TM-align This package unifies protein structure alignment and RNA structure alignment into the standard TM-align program for single chain structure alignment, MM-align program for multi-chain structure alignment, and TM-score program for sequence dependent structure superposition. @@ -9,3 +13,6 @@ version | toolchain ``20180426`` | ``foss/2018b`` ``20180426`` | ``intel/2019a`` ``20190822`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TN93.md b/docs/version-specific/supported-software/t/TN93.md index db1801368..70c370bce 100644 --- a/docs/version-specific/supported-software/t/TN93.md +++ b/docs/version-specific/supported-software/t/TN93.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TN93 This is a simple program meant to compute pairwise distances between aligned nucleotide sequences in sequential FASTA format using the Tamura Nei 93 distance. @@ -7,3 +11,6 @@ This is a simple program meant to compute pairwise distances between aligned nu version | toolchain --------|---------- ``1.0.7`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TOBIAS.md b/docs/version-specific/supported-software/t/TOBIAS.md index 86dc9a1bf..3f0d94434 100644 --- a/docs/version-specific/supported-software/t/TOBIAS.md +++ b/docs/version-specific/supported-software/t/TOBIAS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TOBIAS TOBIAS is a collection of command-line bioinformatics tools for performing footprinting analysis on ATAC-seq data, and includes: Correction of Tn5 insertion bias; Calculation of footprint scores within regulatory regions; Estimation of bound/unbound transcription factor binding sites; and Visualization of footprints within and across different conditions @@ -9,3 +13,6 @@ version | toolchain ``0.12.12`` | ``foss/2021b`` ``0.14.0`` | ``foss/2020b`` ``0.16.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TOML-Fortran.md b/docs/version-specific/supported-software/t/TOML-Fortran.md index 3202afba8..005187a08 100644 --- a/docs/version-specific/supported-software/t/TOML-Fortran.md +++ b/docs/version-specific/supported-software/t/TOML-Fortran.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TOML-Fortran TOML parser for Fortran projects @@ -12,3 +16,6 @@ version | toolchain ``0.3.1`` | ``GCC/11.3.0`` ``0.4.1`` | ``GCC/12.2.0`` ``0.4.1`` | ``intel-compilers/2022.2.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TOPAS.md b/docs/version-specific/supported-software/t/TOPAS.md index e503f0f08..f7cca9e0d 100644 --- a/docs/version-specific/supported-software/t/TOPAS.md +++ b/docs/version-specific/supported-software/t/TOPAS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TOPAS TOPAS wraps and extends the Geant4 Simulation Toolkit to make advanced Monte Carlo simulation of all forms of radiotherapy easier to use for medical physicists. @@ -7,3 +11,6 @@ TOPAS wraps and extends the Geant4 Simulation Toolkit to make advanced Monte Car version | toolchain --------|---------- ``3.9`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TRAVIS-Analyzer.md b/docs/version-specific/supported-software/t/TRAVIS-Analyzer.md index 8c02f5737..3e430363d 100644 --- a/docs/version-specific/supported-software/t/TRAVIS-Analyzer.md +++ b/docs/version-specific/supported-software/t/TRAVIS-Analyzer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TRAVIS-Analyzer TRAVIS is a free tool for analyzing and visualizing trajectories from all kinds of Molecular Dynamics or Monte Carlo simulations. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``210521`` | ``GCC/10.3.0`` ``220729`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TRF.md b/docs/version-specific/supported-software/t/TRF.md index d50dc6beb..d6ddb5743 100644 --- a/docs/version-specific/supported-software/t/TRF.md +++ b/docs/version-specific/supported-software/t/TRF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TRF Tandem repeats finder: a program to analyze DNA sequences. Legacy version. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``4.09.1`` | | ``GCCcore/11.2.0`` ``4.09.1`` | | ``GCCcore/11.3.0`` ``4.09.1`` | | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TRIQS-cthyb.md b/docs/version-specific/supported-software/t/TRIQS-cthyb.md index 295e6f84b..6e2ae34b4 100644 --- a/docs/version-specific/supported-software/t/TRIQS-cthyb.md +++ b/docs/version-specific/supported-software/t/TRIQS-cthyb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TRIQS-cthyb TRIQS (Toolbox for Research on Interacting Quantum Systems) is a scientific project providing a set of C++ and Python libraries to develop new tools for the study of interacting quantum systems. cthyb = continuous-time hybridisation-expansion quantum Monte Carlo The TRIQS-based hybridization-expansion solver allows to solve the generic problem of a quantum impurity embedded in a conduction bath for an arbitrary local interaction vertex. The “impurity” can be any set of orbitals, on one or several atoms. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``3.0.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``3.1.0`` | | ``foss/2022a`` ``3.2.1`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TRIQS-dft_tools.md b/docs/version-specific/supported-software/t/TRIQS-dft_tools.md index 95e2f2b0a..b7be5c8f6 100644 --- a/docs/version-specific/supported-software/t/TRIQS-dft_tools.md +++ b/docs/version-specific/supported-software/t/TRIQS-dft_tools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TRIQS-dft_tools TRIQS (Toolbox for Research on Interacting Quantum Systems) is a scientific project providing a set of C++ and Python libraries to develop new tools for the study of interacting quantum systems. This TRIQS-based-based application is aimed at ab-initio calculations for correlated materials, combining realistic DFT band-structure calculations with the dynamical mean-field theory. Together with the necessary tools to perform the DMFT self-consistency loop for realistic multi-band problems, the package provides a full-fledged charge self-consistent interface to the Wien2K package. In addition, if Wien2k is not available, it provides a generic interface for one-shot DFT+DMFT calculations, where only the single-particle Hamiltonian in orbital space has to be provided. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``3.0.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``3.1.0`` | | ``foss/2022a`` ``3.2.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TRIQS-tprf.md b/docs/version-specific/supported-software/t/TRIQS-tprf.md index 9e591cfab..77ac3ab0e 100644 --- a/docs/version-specific/supported-software/t/TRIQS-tprf.md +++ b/docs/version-specific/supported-software/t/TRIQS-tprf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TRIQS-tprf TRIQS (Toolbox for Research on Interacting Quantum Systems) is a scientific project providing a set of C++ and Python libraries to develop new tools for the study of interacting quantum systems. TPRF is a TRIQS-based two-particle response function tool box that implements basic operations for higher order response functions such as inversion, products, the random phase approximation, the bethe salpeter equation (in the local vertex approximation), etc.. The aim is to provide efficient (C++/OpenMP/MPI) implementations of the basic operations needed to compute the two-particle response in the different two-particle channels (particle-hole, particle-particle). @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``3.0.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``3.1.1`` | | ``foss/2022a`` ``3.2.1`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TRIQS.md b/docs/version-specific/supported-software/t/TRIQS.md index 483a69e19..fd6312a5d 100644 --- a/docs/version-specific/supported-software/t/TRIQS.md +++ b/docs/version-specific/supported-software/t/TRIQS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TRIQS TRIQS (Toolbox for Research on Interacting Quantum Systems) is a scientific project providing a set of C++ and Python libraries to develop new tools for the study of interacting quantum systems. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``3.0.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``3.1.1`` | | ``foss/2022a`` ``3.2.0`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TRUST.md b/docs/version-specific/supported-software/t/TRUST.md index 2c46c8de5..bccdc8cdf 100644 --- a/docs/version-specific/supported-software/t/TRUST.md +++ b/docs/version-specific/supported-software/t/TRUST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TRUST Tcr Receptor Utilities for Solid Tissue (TRUST) is a computational tool to analyze TCR and BCR sequences using unselected RNA sequencing data, profiled from solid tissues, including tumors. @@ -7,3 +11,6 @@ Tcr Receptor Utilities for Solid Tissue (TRUST) is a computational tool to analy version | versionsuffix | toolchain --------|---------------|---------- ``3.0.2`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TRUST4.md b/docs/version-specific/supported-software/t/TRUST4.md index 43d949c9d..2249d4116 100644 --- a/docs/version-specific/supported-software/t/TRUST4.md +++ b/docs/version-specific/supported-software/t/TRUST4.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TRUST4 Tcr Receptor Utilities for Solid Tissue (TRUST) is a computational tool to analyze TCR and BCR sequences using unselected RNA sequencing data, profiled from solid tissues, including tumors. TRUST4 performs de novo assembly on V, J, C genes including the hypervariable complementarity-determining region 3 (CDR3) and reports consensus of BCR/TCR sequences. @@ -9,3 +13,6 @@ version | toolchain ``1.0.5.1`` | ``system`` ``1.0.6`` | ``GCC/11.2.0`` ``1.0.7`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TVB-deps.md b/docs/version-specific/supported-software/t/TVB-deps.md index ff7d4ccd9..bf019d08f 100644 --- a/docs/version-specific/supported-software/t/TVB-deps.md +++ b/docs/version-specific/supported-software/t/TVB-deps.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TVB-deps Bundle of dependency Python packages for TVB (The Virtual Brain) @@ -7,3 +11,6 @@ Bundle of dependency Python packages for TVB (The Virtual Brain) version | versionsuffix | toolchain --------|---------------|---------- ``20160618`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TVB.md b/docs/version-specific/supported-software/t/TVB.md index 812b09eeb..e6116545d 100644 --- a/docs/version-specific/supported-software/t/TVB.md +++ b/docs/version-specific/supported-software/t/TVB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TVB The Virtual Brain will deliver the first open simulation of the human brain based on individual large-scale connectivity. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.4.1`` | ``-Python-2.7.11`` | ``intel/2016a`` ``1.5`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TWL-NINJA.md b/docs/version-specific/supported-software/t/TWL-NINJA.md index 1d9616f65..7c5786f06 100644 --- a/docs/version-specific/supported-software/t/TWL-NINJA.md +++ b/docs/version-specific/supported-software/t/TWL-NINJA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TWL-NINJA Nearly Infinite Neighbor Joining Application. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.97-cluster_only`` | ``GCC/10.2.0`` ``0.98-cluster_only`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TXR.md b/docs/version-specific/supported-software/t/TXR.md index b43b22291..2d6bc2d79 100644 --- a/docs/version-specific/supported-software/t/TXR.md +++ b/docs/version-specific/supported-software/t/TXR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TXR TXR is a pragmatic, convenient tool ready to take on your daily hacking challenges with its dual personality: its whole-document pattern matching and extraction language for scraping information from arbitrary text sources, and its powerful data-processing language to slice through problems like a hot knife through butter. Many tasks can be accomplished with TXR "one liners" directly from your system prompt. @@ -7,3 +11,6 @@ TXR is a pragmatic, convenient tool ready to take on your daily hacking challeng version | toolchain --------|---------- ``291`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TagDust.md b/docs/version-specific/supported-software/t/TagDust.md index de26149a1..42f8341b4 100644 --- a/docs/version-specific/supported-software/t/TagDust.md +++ b/docs/version-specific/supported-software/t/TagDust.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TagDust Raw sequences produced by next generation sequencing (NGS) machines may contain adapter, linker, barcode and fingerprint sequences. TagDust2 is a program to extract and correctly label the sequences to be mapped in downstream pipelines. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.33`` | ``GCCcore/10.2.0`` ``2.33`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TagLib.md b/docs/version-specific/supported-software/t/TagLib.md index e22a49f80..9cc43ddbc 100644 --- a/docs/version-specific/supported-software/t/TagLib.md +++ b/docs/version-specific/supported-software/t/TagLib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TagLib TagLib is a library for reading and editing the meta-data of several popular audio formats. @@ -7,3 +11,6 @@ TagLib is a library for reading and editing the meta-data of several popular aud version | toolchain --------|---------- ``1.11.1`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Taiyaki.md b/docs/version-specific/supported-software/t/Taiyaki.md index 64f87583b..010651cd5 100644 --- a/docs/version-specific/supported-software/t/Taiyaki.md +++ b/docs/version-specific/supported-software/t/Taiyaki.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Taiyaki Taiyaki is research software for training models for basecalling Oxford Nanopore reads. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``5.1.0-20200617`` | ``-Python-3.7.2-PyTorch-1.2.0`` | ``foss/2019a`` ``5.1.0-20200617`` | ``-Python-3.7.2-PyTorch-1.2.0`` | ``fosscuda/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Tapenade.md b/docs/version-specific/supported-software/t/Tapenade.md index fe977cdee..aa0a93f17 100644 --- a/docs/version-specific/supported-software/t/Tapenade.md +++ b/docs/version-specific/supported-software/t/Tapenade.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Tapenade Tool for Algorithmic Differentiation of programs. @@ -7,3 +11,6 @@ Tool for Algorithmic Differentiation of programs. version | versionsuffix | toolchain --------|---------------|---------- ``3.16`` | ``-Java-17`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Tcl.md b/docs/version-specific/supported-software/t/Tcl.md index 915f8ceb4..dd19b5177 100644 --- a/docs/version-specific/supported-software/t/Tcl.md +++ b/docs/version-specific/supported-software/t/Tcl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Tcl Tcl (Tool Command Language) is a very powerful but easy to learn dynamic programming language, suitable for a very wide range of uses, including web and desktop applications, networking, administration, testing and many more. @@ -43,3 +47,6 @@ version | toolchain ``8.6.8`` | ``GCCcore/7.3.0`` ``8.6.9`` | ``GCCcore/8.2.0`` ``8.6.9`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Telescope.md b/docs/version-specific/supported-software/t/Telescope.md index ec6d70615..04d0ae7ae 100644 --- a/docs/version-specific/supported-software/t/Telescope.md +++ b/docs/version-specific/supported-software/t/Telescope.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Telescope Single locus resolution of Transposable ELEment expression using next-generation sequencing. @@ -7,3 +11,6 @@ Single locus resolution of Transposable ELEment expression using next-generation version | versionsuffix | toolchain --------|---------------|---------- ``1.0.3`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Teneto.md b/docs/version-specific/supported-software/t/Teneto.md index bdd263031..b7cf2a7b8 100644 --- a/docs/version-specific/supported-software/t/Teneto.md +++ b/docs/version-specific/supported-software/t/Teneto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Teneto Teneto is package for deriving, analysing and plotting temporal network representations. Additional tools for temporal network analysis with neuroimaging contexts. @@ -7,3 +11,6 @@ Teneto is package for deriving, analysing and plotting temporal network represen version | versionsuffix | toolchain --------|---------------|---------- ``0.5.1`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TensorFlow-Datasets.md b/docs/version-specific/supported-software/t/TensorFlow-Datasets.md index 8cea958e3..0c75e806e 100644 --- a/docs/version-specific/supported-software/t/TensorFlow-Datasets.md +++ b/docs/version-specific/supported-software/t/TensorFlow-Datasets.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TensorFlow-Datasets TensorFlow Datasets is a collection of datasets ready to use, with TensorFlow or other Python ML frameworks, such as Jax. All datasets are exposed as tf.data.Datasets , enabling easy-to-use and high-performance input pipelines. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``4.7.0`` | ``-CUDA-11.3.1`` | ``foss/2021a`` ``4.8.3`` | ``-CUDA-11.4.1`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TensorFlow-Graphics.md b/docs/version-specific/supported-software/t/TensorFlow-Graphics.md index 838e76474..2b38e1086 100644 --- a/docs/version-specific/supported-software/t/TensorFlow-Graphics.md +++ b/docs/version-specific/supported-software/t/TensorFlow-Graphics.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TensorFlow-Graphics Tensorflow Graphics provides a set of differentiable graphics and geometry layers (e.g. cameras, reflectance models, spatial transformations, mesh convolutions) and 3D viewer functionalities (e.g. 3D TensorBoard) that can be used to train and debug your machine learning models of choice. @@ -7,3 +11,6 @@ Tensorflow Graphics provides a set of differentiable graphics and geometry layer version | versionsuffix | toolchain --------|---------------|---------- ``2021.12.3`` | ``-CUDA-11.4.1`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TensorFlow.md b/docs/version-specific/supported-software/t/TensorFlow.md index 487cb5f88..be4108a74 100644 --- a/docs/version-specific/supported-software/t/TensorFlow.md +++ b/docs/version-specific/supported-software/t/TensorFlow.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TensorFlow An open-source software library for Machine Intelligence @@ -91,3 +95,6 @@ version | versionsuffix | toolchain ``2.8.4`` | | ``foss/2021b`` ``2.9.1`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``2.9.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TensorRT.md b/docs/version-specific/supported-software/t/TensorRT.md index ff2efbc2e..b57522c2f 100644 --- a/docs/version-specific/supported-software/t/TensorRT.md +++ b/docs/version-specific/supported-software/t/TensorRT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TensorRT NVIDIA TensorRT is a platform for high-performance deep learning inference @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``4.0.1.6`` | ``-Python-2.7.15`` | ``fosscuda/2018b`` ``8.6.1`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Tesla-Deployment-Kit.md b/docs/version-specific/supported-software/t/Tesla-Deployment-Kit.md index 6e558a7ea..e8bbc0df7 100644 --- a/docs/version-specific/supported-software/t/Tesla-Deployment-Kit.md +++ b/docs/version-specific/supported-software/t/Tesla-Deployment-Kit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Tesla-Deployment-Kit The Tesla Deployment Kit is a set of tools provided primarily for the NVIDIA Tesla range of GPUs. They aim to empower users to better manage their NVIDIA GPUs by providing a broad range of functionalities. The kit contains: * NVIDIA Management Library (NVML), * Tesla Deployment Kit - Linux Edition (Aug 1st, 2013) @@ -7,3 +11,6 @@ The Tesla Deployment Kit is a set of tools provided primarily for the NVIDIA Tes version | toolchain --------|---------- ``5.319.43`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TetGen.md b/docs/version-specific/supported-software/t/TetGen.md index d6261f244..ca3616b80 100644 --- a/docs/version-specific/supported-software/t/TetGen.md +++ b/docs/version-specific/supported-software/t/TetGen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TetGen A Quality Tetrahedral Mesh Generator and a 3D Delaunay Triangulator @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.5.0`` | ``GCCcore/6.4.0`` ``1.6.0`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Text-CSV.md b/docs/version-specific/supported-software/t/Text-CSV.md index b56974f3a..851abe5c7 100644 --- a/docs/version-specific/supported-software/t/Text-CSV.md +++ b/docs/version-specific/supported-software/t/Text-CSV.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Text-CSV Text-CSV parser @@ -7,3 +11,6 @@ Text-CSV parser version | versionsuffix | toolchain --------|---------------|---------- ``1.33`` | ``-Perl-5.22.1`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Theano.md b/docs/version-specific/supported-software/t/Theano.md index ef7445974..f434c053c 100644 --- a/docs/version-specific/supported-software/t/Theano.md +++ b/docs/version-specific/supported-software/t/Theano.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Theano Theano is a Python library that allows you to define, optimize, and evaluate mathematical expressions involving multi-dimensional arrays efficiently. @@ -38,3 +42,6 @@ version | versionsuffix | toolchain ``1.1.2`` | ``-PyMC`` | ``fosscuda/2020b`` ``1.1.2`` | ``-PyMC`` | ``intel/2020b`` ``1.1.2`` | ``-PyMC`` | ``intel/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/ThemisPy.md b/docs/version-specific/supported-software/t/ThemisPy.md index 3a4ba44ac..341ac3c93 100644 --- a/docs/version-specific/supported-software/t/ThemisPy.md +++ b/docs/version-specific/supported-software/t/ThemisPy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ThemisPy A header-only C++ library for L-BFGS and L-BFGS-B algorithms @@ -7,3 +11,6 @@ A header-only C++ library for L-BFGS and L-BFGS-B algorithms version | toolchain --------|---------- ``0.3.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TiCCutils.md b/docs/version-specific/supported-software/t/TiCCutils.md index fd246e8f8..b38853051 100644 --- a/docs/version-specific/supported-software/t/TiCCutils.md +++ b/docs/version-specific/supported-software/t/TiCCutils.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TiCCutils TiCC utils is a collection of generic C++ software which is used in a lot of programs produced at Tilburg centre for Cognition and Communication (TiCC) at Tilburg University and Centre for Dutch Language and Speech at University of Antwerp. @@ -9,3 +13,6 @@ version | toolchain ``0.11`` | ``foss/2016a`` ``0.21`` | ``iimpi/2019a`` ``0.21`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TiMBL.md b/docs/version-specific/supported-software/t/TiMBL.md index 273484ea9..55f6e87fe 100644 --- a/docs/version-specific/supported-software/t/TiMBL.md +++ b/docs/version-specific/supported-software/t/TiMBL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TiMBL TiMBL (Tilburg Memory Based Learner) is an open source software package implementing several memory-based learning algorithms, among which IB1-IG, an implementation of k-nearest neighbor classification with feature weighting suitable for symbolic feature spaces, and IGTree, a decision-tree approximation of IB1-IG. All implemented algorithms have in common that they store some representation of the training set explicitly in memory. During testing, new cases are classified by extrapolation from the most similar stored cases. @@ -9,3 +13,6 @@ version | toolchain ``6.4.13`` | ``iimpi/2019a`` ``6.4.13`` | ``intel/2018b`` ``6.4.7`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Tika.md b/docs/version-specific/supported-software/t/Tika.md index b521d83d3..fcd5a727d 100644 --- a/docs/version-specific/supported-software/t/Tika.md +++ b/docs/version-specific/supported-software/t/Tika.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Tika The Apache Tika toolkit detects and extracts metadata and text from over a thousand different file types (such as PPT, XLS, and PDF). @@ -7,3 +11,6 @@ The Apache Tika toolkit detects and extracts metadata and text from over a thous version | toolchain --------|---------- ``1.16`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TinyDB.md b/docs/version-specific/supported-software/t/TinyDB.md index db825929c..74243b0af 100644 --- a/docs/version-specific/supported-software/t/TinyDB.md +++ b/docs/version-specific/supported-software/t/TinyDB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TinyDB TinyDB is a lightweight document oriented database optimized for your happiness :) It's written in pure Python and has no external dependencies. The target are small apps that would be blown away by a SQL-DB or an external database server. @@ -7,3 +11,6 @@ TinyDB is a lightweight document oriented database optimized for your happiness version | toolchain --------|---------- ``3.15.2`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TinyXML.md b/docs/version-specific/supported-software/t/TinyXML.md index 4ba9e2440..0eff25162 100644 --- a/docs/version-specific/supported-software/t/TinyXML.md +++ b/docs/version-specific/supported-software/t/TinyXML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TinyXML TinyXML is a simple, small, minimal, C++ XML parser that can be easily integrating into other programs. It reads XML and creates C++ objects representing the XML document. The objects can be manipulated, changed, and saved again as XML. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.6.2`` | ``GCCcore/11.2.0`` ``2.6.2`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Tk.md b/docs/version-specific/supported-software/t/Tk.md index 08aa01a14..471c40a72 100644 --- a/docs/version-specific/supported-software/t/Tk.md +++ b/docs/version-specific/supported-software/t/Tk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Tk Tk is an open source, cross-platform widget toolchain that provides a library of basic elements for building a graphical user interface (GUI) in many different programming languages. @@ -44,3 +48,6 @@ version | versionsuffix | toolchain ``8.6.8`` | | ``iomkl/2018a`` ``8.6.9`` | | ``GCCcore/8.2.0`` ``8.6.9`` | | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Tkinter.md b/docs/version-specific/supported-software/t/Tkinter.md index f54469d2d..cd802a870 100644 --- a/docs/version-specific/supported-software/t/Tkinter.md +++ b/docs/version-specific/supported-software/t/Tkinter.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Tkinter Tkinter module, built with the Python buildsystem @@ -47,3 +51,6 @@ version | versionsuffix | toolchain ``3.8.6`` | | ``GCCcore/10.2.0`` ``3.9.5`` | | ``GCCcore/10.3.0`` ``3.9.6`` | | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/ToFu.md b/docs/version-specific/supported-software/t/ToFu.md index 64c069bb4..c18365eb2 100644 --- a/docs/version-specific/supported-software/t/ToFu.md +++ b/docs/version-specific/supported-software/t/ToFu.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ToFu Tomography for Fusion. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``1.4.1`` | ``-Python-3.6.4`` | ``intel/2018a`` ``1.5.0`` | | ``foss/2020b`` ``1.5.0`` | | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Togl.md b/docs/version-specific/supported-software/t/Togl.md index 6375689f0..9e5a84227 100644 --- a/docs/version-specific/supported-software/t/Togl.md +++ b/docs/version-specific/supported-software/t/Togl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Togl A Tcl/Tk widget for OpenGL rendering. @@ -10,3 +14,6 @@ version | toolchain ``2.0`` | ``GCCcore/11.2.0`` ``2.0`` | ``GCCcore/11.3.0`` ``2.0`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Tombo.md b/docs/version-specific/supported-software/t/Tombo.md index 416a75203..16bf839ae 100644 --- a/docs/version-specific/supported-software/t/Tombo.md +++ b/docs/version-specific/supported-software/t/Tombo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Tombo Tombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data. @@ -7,3 +11,6 @@ Tombo is a suite of tools primarily for the identification of modified nucleotid version | versionsuffix | toolchain --------|---------------|---------- ``1.5.1`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TopHat.md b/docs/version-specific/supported-software/t/TopHat.md index 3eedfb5f9..811b0a823 100644 --- a/docs/version-specific/supported-software/t/TopHat.md +++ b/docs/version-specific/supported-software/t/TopHat.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TopHat TopHat is a fast splice junction mapper for RNA-Seq reads. @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``2.1.2`` | ``-Python-2.7.18`` | ``gompi/2020a`` ``2.1.2`` | | ``iimpi/2019b`` ``2.1.2`` | ``-Python-2.7.18`` | ``iimpi/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TorchIO.md b/docs/version-specific/supported-software/t/TorchIO.md index 7cc57689e..5fd986aa4 100644 --- a/docs/version-specific/supported-software/t/TorchIO.md +++ b/docs/version-specific/supported-software/t/TorchIO.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TorchIO TorchIO is an open-source Python library for efficient loading, preprocessing, augmentation and patch-based sampling of 3D medical images in deep learning, following the design of PyTorch. It includes multiple intensity and spatial transforms for data augmentation and preprocessing. These transforms include typical computer vision operations such as random affine transformations and also domain-specific ones such as simulation of intensity artifacts due to MRI magnetic field inhomogeneity (bias) or k-space motion artifacts. @@ -7,3 +11,6 @@ TorchIO is an open-source Python library for efficient loading, preprocessing, a version | versionsuffix | toolchain --------|---------------|---------- ``0.19.6`` | ``-CUDA-12.1.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TotalView.md b/docs/version-specific/supported-software/t/TotalView.md index b65f60295..bff5afa00 100644 --- a/docs/version-specific/supported-software/t/TotalView.md +++ b/docs/version-specific/supported-software/t/TotalView.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TotalView TotalView is a GUI-based source code defect analysis tool that gives you unprecedented control over processes and thread execution and visibility into program state and variables. It allows you to debug one or many processes and/or threads in a single window with complete control over program execution. This allows you to set breakpoints, stepping line by line through the code on a single thread, or with coordinated groups of processes or threads, and run or halt arbitrary sets of processes or threads. You can reproduce and troubleshoot difficult problems that can occur in concurrent programs that take advantage of threads, OpenMP, MPI, GPUs or coprocessors. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``8.11.0-0`` | ``-linux-x86-64`` | ``system`` ``8.11.0-2`` | ``-linux-x86-64`` | ``system`` ``8.12.0-0`` | ``-linux-x86-64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Tracer.md b/docs/version-specific/supported-software/t/Tracer.md index 432bfab98..a6f0ad3b9 100644 --- a/docs/version-specific/supported-software/t/Tracer.md +++ b/docs/version-specific/supported-software/t/Tracer.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Tracer Tracer is a graphical tool for visualization and diagnostics of MCMC output. @@ -7,3 +11,6 @@ Tracer is a graphical tool for visualization and diagnostics of MCMC output. version | toolchain --------|---------- ``1.7.1`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TransDecoder.md b/docs/version-specific/supported-software/t/TransDecoder.md index 2a8211fbd..451bc73bc 100644 --- a/docs/version-specific/supported-software/t/TransDecoder.md +++ b/docs/version-specific/supported-software/t/TransDecoder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TransDecoder TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2.1.0`` | ``-Perl-5.24.1`` | ``intel/2017a`` ``5.5.0`` | | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TranscriptClean.md b/docs/version-specific/supported-software/t/TranscriptClean.md index b1aaf7113..06595ddaa 100644 --- a/docs/version-specific/supported-software/t/TranscriptClean.md +++ b/docs/version-specific/supported-software/t/TranscriptClean.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TranscriptClean TranscriptClean is a Python program that corrects mismatches, microindels, and noncanonical splice junctions in long reads that have been mapped to the genome. @@ -7,3 +11,6 @@ TranscriptClean is a Python program that corrects mismatches, microindels, and n version | toolchain --------|---------- ``2.0.2`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Transformers.md b/docs/version-specific/supported-software/t/Transformers.md index 5bcc8f180..c4cfe115c 100644 --- a/docs/version-specific/supported-software/t/Transformers.md +++ b/docs/version-specific/supported-software/t/Transformers.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Transformers State-of-the-art Natural Language Processing for PyTorch and TensorFlow 2.0 @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``4.29.2`` | | ``foss/2022a`` ``4.30.2`` | | ``foss/2022b`` ``4.39.3`` | | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Transrate.md b/docs/version-specific/supported-software/t/Transrate.md index 363c71c66..c6a184c44 100644 --- a/docs/version-specific/supported-software/t/Transrate.md +++ b/docs/version-specific/supported-software/t/Transrate.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Transrate Transrate is software for de-novo transcriptome assembly quality analysis. It examines your assembly in detail and compares it to experimental evidence such as the sequencing reads, reporting quality scores for contigs and assemblies. This allows you to choose between assemblers and parameters, filter out the bad contigs from an assembly, and help decide when to stop trying to improve the assembly. @@ -7,3 +11,6 @@ Transrate is software for de-novo transcriptome assembly quality analysis. It e version | toolchain --------|---------- ``1.0.3`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TreeMix.md b/docs/version-specific/supported-software/t/TreeMix.md index 94e498936..f7356c648 100644 --- a/docs/version-specific/supported-software/t/TreeMix.md +++ b/docs/version-specific/supported-software/t/TreeMix.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TreeMix TreeMix is a method for inferring the patterns of population splits and mixtures in the history of a set of populations. @@ -9,3 +13,6 @@ version | toolchain ``1.13`` | ``GCC/10.3.0`` ``1.13`` | ``GCC/11.2.0`` ``1.13`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TreeShrink.md b/docs/version-specific/supported-software/t/TreeShrink.md index ac000e290..68b3b6988 100644 --- a/docs/version-specific/supported-software/t/TreeShrink.md +++ b/docs/version-specific/supported-software/t/TreeShrink.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TreeShrink TreeShrink is an algorithm for detecting abnormally long branches in one or more phylogenetic trees. @@ -7,3 +11,6 @@ TreeShrink is an algorithm for detecting abnormally long branches in one or more version | versionsuffix | toolchain --------|---------------|---------- ``1.3.2`` | ``-Python-3.7.2`` | ``GCC/8.2.0-2.31.1`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Triangle.md b/docs/version-specific/supported-software/t/Triangle.md index 218cf1e97..5f2682ae5 100644 --- a/docs/version-specific/supported-software/t/Triangle.md +++ b/docs/version-specific/supported-software/t/Triangle.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Triangle Triangle generates exact Delaunay triangulations, constrained Delaunay triangulations, conforming Delaunay triangulations, Voronoi diagrams, and high-quality triangular meshes. The latter can be generated with no small or large angles, and are thus suitable for finite element analysis. @@ -13,3 +17,6 @@ version | toolchain ``1.6`` | ``intel/2016b`` ``1.6`` | ``intel/2017a`` ``1.6`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Trilinos.md b/docs/version-specific/supported-software/t/Trilinos.md index 329512899..6fb888a15 100644 --- a/docs/version-specific/supported-software/t/Trilinos.md +++ b/docs/version-specific/supported-software/t/Trilinos.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Trilinos The Trilinos Project is an effort to develop algorithms and enabling technologies within an object-oriented software framework for the solution of large-scale, complex multi-physics engineering and scientific problems. A unique design feature of Trilinos is its focus on packages. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``12.12.1`` | ``-Python-3.6.4`` | ``intel/2018a`` ``13.4.1`` | ``-zoltan`` | ``foss/2022a`` ``13.4.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Trim_Galore.md b/docs/version-specific/supported-software/t/Trim_Galore.md index 7ec6217e9..a97630c51 100644 --- a/docs/version-specific/supported-software/t/Trim_Galore.md +++ b/docs/version-specific/supported-software/t/Trim_Galore.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Trim_Galore A wrapper tool around Cutadapt and FastQC to consistently apply quality and adapter trimming to FastQ files, with some extra functionality for MspI-digested RRBS-type (Reduced Representation Bisufite-Seq) libraries. @@ -24,3 +28,6 @@ version | versionsuffix | toolchain ``0.6.6`` | ``-Python-2.7.18`` | ``GCC/10.2.0`` ``0.6.6`` | ``-Python-3.8.2`` | ``GCCcore/9.3.0`` ``0.6.7`` | | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Trimmomatic.md b/docs/version-specific/supported-software/t/Trimmomatic.md index 56e374ae9..bc18eddc9 100644 --- a/docs/version-specific/supported-software/t/Trimmomatic.md +++ b/docs/version-specific/supported-software/t/Trimmomatic.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Trimmomatic Trimmomatic performs a variety of useful trimming tasks for illumina paired-end and single ended data.The selection of trimming steps and their associated parameters are supplied on the command line. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``0.39`` | ``-Java-1.8`` | ``system`` ``0.39`` | ``-Java-11`` | ``system`` ``0.39`` | ``-Java-17`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Trinity.md b/docs/version-specific/supported-software/t/Trinity.md index 875fcb363..ba9d3a11e 100644 --- a/docs/version-specific/supported-software/t/Trinity.md +++ b/docs/version-specific/supported-software/t/Trinity.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Trinity Trinity represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-Seq data. Trinity combines three independent software modules: Inchworm, Chrysalis, and Butterfly, applied sequentially to process large volumes of RNA-Seq reads. @@ -20,3 +24,6 @@ version | versionsuffix | toolchain ``2.9.1`` | ``-Python-2.7.16`` | ``foss/2019b`` ``2.9.1`` | ``-Python-3.7.4`` | ``foss/2019b`` ``2.9.1`` | | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Trinotate.md b/docs/version-specific/supported-software/t/Trinotate.md index 116b34a5b..5d5f30bcb 100644 --- a/docs/version-specific/supported-software/t/Trinotate.md +++ b/docs/version-specific/supported-software/t/Trinotate.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Trinotate Trinotate is a comprehensive annotation suite designed for automatic functional annotation of transcriptomes, particularly de novo assembled transcriptomes, from model or non-model organisms. Trinotate makes use of a number of different well referenced methods for functional annotation including homology search to known sequence data (BLAST+/SwissProt), protein domain identification (HMMER/PFAM), protein signal peptide and transmembrane domain prediction (signalP/tmHMM), and leveraging various annotation databases (eggNOG/GO/Kegg databases). All functional annotation data derived from the analysis of transcripts is integrated into a SQLite database which allows fast efficient searching for terms with specific qualities related to a desired scientific hypothesis or a means to create a whole annotation report for a transcriptome. @@ -7,3 +11,6 @@ Trinotate is a comprehensive annotation suite designed for automatic functional version | toolchain --------|---------- ``4.0.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Triplexator.md b/docs/version-specific/supported-software/t/Triplexator.md index cb5a28961..4e4e288ad 100644 --- a/docs/version-specific/supported-software/t/Triplexator.md +++ b/docs/version-specific/supported-software/t/Triplexator.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Triplexator Triplexator is a tool for detecting nucleic acid triple helices and triplex features in nucleotide sequences using the canonical triplex-formation rules. @@ -7,3 +11,6 @@ Triplexator is a tool for detecting nucleic acid triple helices and triplex feat version | toolchain --------|---------- ``1.3.3`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Triton.md b/docs/version-specific/supported-software/t/Triton.md index 89dbbdf36..070eda0b0 100644 --- a/docs/version-specific/supported-software/t/Triton.md +++ b/docs/version-specific/supported-software/t/Triton.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Triton Triton is a language and compiler for parallel programming. It aims to provide a Python-based programming environment for productively writing custom DNN compute kernels capable of running at maximal throughput on modern GPU hardware. @@ -7,3 +11,6 @@ Triton is a language and compiler for parallel programming. It aims to provide a version | versionsuffix | toolchain --------|---------------|---------- ``1.1.1`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/Trycycler.md b/docs/version-specific/supported-software/t/Trycycler.md index 05b2104e3..27f722dfa 100644 --- a/docs/version-specific/supported-software/t/Trycycler.md +++ b/docs/version-specific/supported-software/t/Trycycler.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Trycycler Trycycler is a tool for generating consensus long-read assemblies for bacterial genomes. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.3.3`` | ``-Python-3.8.2`` | ``foss/2020a`` ``0.5.2`` | | ``foss/2021a`` ``0.5.3`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/TurboVNC.md b/docs/version-specific/supported-software/t/TurboVNC.md index 2930474c6..59bfb9b43 100644 --- a/docs/version-specific/supported-software/t/TurboVNC.md +++ b/docs/version-specific/supported-software/t/TurboVNC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # TurboVNC TurboVNC is a derivative of VNC (Virtual Network Computing) that is tuned to provide peak performance for 3D and video workloads. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.2.3`` | ``GCCcore/8.2.0`` ``3.0.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/index.md b/docs/version-specific/supported-software/t/index.md index 8acfb01fe..3e38225cc 100644 --- a/docs/version-specific/supported-software/t/index.md +++ b/docs/version-specific/supported-software/t/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (t) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - *t* - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [T-Coffee](T-Coffee.md) * [t-SNE-CUDA](t-SNE-CUDA.md) * [tabix](tabix.md) diff --git a/docs/version-specific/supported-software/t/t-SNE-CUDA.md b/docs/version-specific/supported-software/t/t-SNE-CUDA.md index 97b3fb0ab..98d40e28e 100644 --- a/docs/version-specific/supported-software/t/t-SNE-CUDA.md +++ b/docs/version-specific/supported-software/t/t-SNE-CUDA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # t-SNE-CUDA GPU Accelerated t-SNE for CUDA with Python bindings @@ -7,3 +11,6 @@ GPU Accelerated t-SNE for CUDA with Python bindings version | versionsuffix | toolchain --------|---------------|---------- ``3.0.1`` | ``-CUDA-12.1.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tMAE.md b/docs/version-specific/supported-software/t/tMAE.md index 2ea8906e8..ca8f3a4a2 100644 --- a/docs/version-specific/supported-software/t/tMAE.md +++ b/docs/version-specific/supported-software/t/tMAE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tMAE Package containing functions to: perform a negative binomial test on allele-specific counts add gnomAD minor allele frequencies MAplot (FC vs total counts) of allele-specific counts and results allelic counts (ALT vs REF) @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.0.0`` | ``-R-4.0.3`` | ``foss/2020b`` ``1.0.1`` | ``-R-4.1.2`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tRNAscan-SE.md b/docs/version-specific/supported-software/t/tRNAscan-SE.md index 8ef4451d9..637303f09 100644 --- a/docs/version-specific/supported-software/t/tRNAscan-SE.md +++ b/docs/version-specific/supported-software/t/tRNAscan-SE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tRNAscan-SE A program for detection of tRNA genes @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.0.12`` | ``GCC/11.2.0`` ``2.0.12`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tabix.md b/docs/version-specific/supported-software/t/tabix.md index 04e412b66..2db638a5c 100644 --- a/docs/version-specific/supported-software/t/tabix.md +++ b/docs/version-specific/supported-software/t/tabix.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tabix Generic indexer for TAB-delimited genome position files @@ -17,3 +21,6 @@ version | toolchain ``0.2.6`` | ``foss/2016a`` ``0.2.6`` | ``intel/2016a`` ``0.2.6`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tabixpp.md b/docs/version-specific/supported-software/t/tabixpp.md index 3dd8c3bb4..d13a13eae 100644 --- a/docs/version-specific/supported-software/t/tabixpp.md +++ b/docs/version-specific/supported-software/t/tabixpp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tabixpp C++ wrapper to tabix indexer @@ -12,3 +16,6 @@ version | toolchain ``1.1.0`` | ``GCC/9.3.0`` ``1.1.2`` | ``GCC/11.3.0`` ``1.1.2`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/taco.md b/docs/version-specific/supported-software/t/taco.md index 6a8cb8d7f..e86f6c33d 100644 --- a/docs/version-specific/supported-software/t/taco.md +++ b/docs/version-specific/supported-software/t/taco.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # taco Multi-sample transcriptome assembly from RNA-Seq @@ -7,3 +11,6 @@ Multi-sample transcriptome assembly from RNA-Seq version | versionsuffix | toolchain --------|---------------|---------- ``0.5.1`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tantan.md b/docs/version-specific/supported-software/t/tantan.md index f3e27441f..151dc1ca6 100644 --- a/docs/version-specific/supported-software/t/tantan.md +++ b/docs/version-specific/supported-software/t/tantan.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tantan tantan identifies simple regions / low complexity / tandem repeats in DNA or protein sequences @@ -7,3 +11,6 @@ tantan identifies simple regions / low complexity / tandem repeats in DNA or pro version | toolchain --------|---------- ``40`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/task-spooler.md b/docs/version-specific/supported-software/t/task-spooler.md index 7405b996a..7676865f2 100644 --- a/docs/version-specific/supported-software/t/task-spooler.md +++ b/docs/version-specific/supported-software/t/task-spooler.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # task-spooler task spooler is a Unix batch system where the tasks spooled run one after the other. @@ -7,3 +11,6 @@ task spooler is a Unix batch system where the tasks spooled run one after the ot version | toolchain --------|---------- ``1.0.2`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/taxator-tk.md b/docs/version-specific/supported-software/t/taxator-tk.md index eebf22eae..7998dc410 100644 --- a/docs/version-specific/supported-software/t/taxator-tk.md +++ b/docs/version-specific/supported-software/t/taxator-tk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # taxator-tk A set of programs for the taxonomic analysis of nucleotide sequence data @@ -9,3 +13,6 @@ version | toolchain ``1.3.3`` | ``GCC/10.2.0`` ``1.3.3`` | ``foss/2018b`` ``1.3.3`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tbb.md b/docs/version-specific/supported-software/t/tbb.md index a66caeddc..cf33be475 100644 --- a/docs/version-specific/supported-software/t/tbb.md +++ b/docs/version-specific/supported-software/t/tbb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tbb Intel Threading Building Blocks (Intel TBB) is a widely used, award-winning C++ template library for creating reliable, portable, and scalable parallel applications. Use Intel TBB for a simple and rapid way of developing robust task-based parallel applications that scale to available processor cores, are compatible with multiple environments, and are easier to maintain. Intel TBB is the most proficient way to implement future-proof parallel applications that tap into the power and performance of multicore and manycore hardware platforms. @@ -36,3 +40,6 @@ version | toolchain ``4.0.5.339`` | ``system`` ``4.3.6.211`` | ``system`` ``4.4.2.152`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tbl2asn.md b/docs/version-specific/supported-software/t/tbl2asn.md index dc5492688..1ae3f0eeb 100644 --- a/docs/version-specific/supported-software/t/tbl2asn.md +++ b/docs/version-specific/supported-software/t/tbl2asn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tbl2asn Tbl2asn is a command-line program that automates the creation of sequence records for submission to GenBank @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``20220427`` | ``-linux64`` | ``system`` ``20230713`` | ``-linux64`` | ``system`` ``25.8`` | ``-linux64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tcsh.md b/docs/version-specific/supported-software/t/tcsh.md index f410e3cdc..48a938c04 100644 --- a/docs/version-specific/supported-software/t/tcsh.md +++ b/docs/version-specific/supported-software/t/tcsh.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tcsh Tcsh is an enhanced, but completely compatible version of the Berkeley UNIX C shell (csh). It is a command language interpreter usable both as an interactive login shell and a shell script command processor. It includes a command-line editor, programmable word completion, spelling correction, a history mechanism, job control and a C-like syntax. @@ -19,3 +23,6 @@ version | toolchain ``6.24.01`` | ``GCCcore/11.3.0`` ``6.24.07`` | ``GCCcore/12.2.0`` ``6.24.10`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tecplot360ex.md b/docs/version-specific/supported-software/t/tecplot360ex.md index 62a49bf8e..dd6d06cb9 100644 --- a/docs/version-specific/supported-software/t/tecplot360ex.md +++ b/docs/version-specific/supported-software/t/tecplot360ex.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tecplot360ex Quickly plot and animate your CFD results exactly the way you want. Analyze complex solutions, arrange multiple layouts, and communicate your results with professional images and animations. @@ -7,3 +11,6 @@ Quickly plot and animate your CFD results exactly the way you want. Analyze comp version | toolchain --------|---------- ``linux64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tensorboard.md b/docs/version-specific/supported-software/t/tensorboard.md index 25c40089e..7a0dd9b23 100644 --- a/docs/version-specific/supported-software/t/tensorboard.md +++ b/docs/version-specific/supported-software/t/tensorboard.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tensorboard TensorBoard is a suite of web applications for inspecting and understanding your TensorFlow runs and graphs. @@ -9,3 +13,6 @@ version | toolchain ``2.10.0`` | ``foss/2022a`` ``2.15.1`` | ``gfbf/2023a`` ``2.8.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tensorboardX.md b/docs/version-specific/supported-software/t/tensorboardX.md index 325092875..d0540f20b 100644 --- a/docs/version-specific/supported-software/t/tensorboardX.md +++ b/docs/version-specific/supported-software/t/tensorboardX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tensorboardX Tensorboard for PyTorch. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``2.5.1`` | | ``foss/2022a`` ``2.6.2.2`` | | ``foss/2022b`` ``2.6.2.2`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tensorflow-compression.md b/docs/version-specific/supported-software/t/tensorflow-compression.md index 56526a852..5ccec1188 100644 --- a/docs/version-specific/supported-software/t/tensorflow-compression.md +++ b/docs/version-specific/supported-software/t/tensorflow-compression.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tensorflow-compression TensorFlow Compression (TFC) contains data compression tools for TensorFlow. @@ -7,3 +11,6 @@ TensorFlow Compression (TFC) contains data compression tools for TensorFlow. version | versionsuffix | toolchain --------|---------------|---------- ``2.11.0`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tensorflow-probability.md b/docs/version-specific/supported-software/t/tensorflow-probability.md index 20279484c..e9493b5ea 100644 --- a/docs/version-specific/supported-software/t/tensorflow-probability.md +++ b/docs/version-specific/supported-software/t/tensorflow-probability.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tensorflow-probability TensorFlow Probability (TFP) is a library for probabilistic reasoning and statistical analysis. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``0.19.0`` | | ``foss/2022a`` ``0.20.0`` | | ``foss/2023a`` ``0.9.0`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/terastructure.md b/docs/version-specific/supported-software/t/terastructure.md index 663792cf2..fcff31c84 100644 --- a/docs/version-specific/supported-software/t/terastructure.md +++ b/docs/version-specific/supported-software/t/terastructure.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # terastructure TeraStructure is a new algorithm to fit Bayesian models of genetic variation in human populations on tera-sample-sized data sets (10^12 observed genotypes, i.e., 1M individuals at 1M SNPs). This package provides a scalable, multi-threaded C++ implementation that can be run on a single computer. @@ -7,3 +11,6 @@ TeraStructure is a new algorithm to fit Bayesian models of genetic variation in version | toolchain --------|---------- ``1.0`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/termcolor.md b/docs/version-specific/supported-software/t/termcolor.md index 7b04506e7..0f1d5b245 100644 --- a/docs/version-specific/supported-software/t/termcolor.md +++ b/docs/version-specific/supported-software/t/termcolor.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # termcolor Termcolor is a header-only C++ library for printing colored messages to the terminal. @@ -7,3 +11,6 @@ Termcolor is a header-only C++ library for printing colored messages to the ter version | toolchain --------|---------- ``2.0.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tesseract.md b/docs/version-specific/supported-software/t/tesseract.md index da484957e..d43c1ce5c 100644 --- a/docs/version-specific/supported-software/t/tesseract.md +++ b/docs/version-specific/supported-software/t/tesseract.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tesseract Tesseract is an optical character recognition engine @@ -10,3 +14,6 @@ version | toolchain ``4.1.0`` | ``GCCcore/10.3.0`` ``4.1.0`` | ``GCCcore/8.2.0`` ``5.3.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/testpath.md b/docs/version-specific/supported-software/t/testpath.md index 75de22f82..bd323dbfb 100644 --- a/docs/version-specific/supported-software/t/testpath.md +++ b/docs/version-specific/supported-software/t/testpath.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # testpath Test utilities for code working with files and commands @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``0.3`` | ``-Python-2.7.11`` | ``intel/2016a`` ``0.3`` | ``-Python-2.7.12`` | ``intel/2016b`` ``0.3`` | ``-Python-3.5.2`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/texinfo.md b/docs/version-specific/supported-software/t/texinfo.md index 499743083..0f13d85ce 100644 --- a/docs/version-specific/supported-software/t/texinfo.md +++ b/docs/version-specific/supported-software/t/texinfo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # texinfo Texinfo is the official documentation format of the GNU project. @@ -18,3 +22,6 @@ version | toolchain ``6.8`` | ``GCCcore/11.2.0`` ``7.0.2`` | ``GCCcore/11.3.0`` ``7.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/texlive.md b/docs/version-specific/supported-software/t/texlive.md index f8f853d5f..5beedb47a 100644 --- a/docs/version-specific/supported-software/t/texlive.md +++ b/docs/version-specific/supported-software/t/texlive.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # texlive TeX is a typesetting language. Instead of visually formatting your text, you enter your manuscript text intertwined with TeX commands in a plain text file. You then run TeX to produce formatted output, such as a PDF file. Thus, in contrast to standard word processors, your document is a separate file that does not pretend to be a representation of the final typeset output, and so can be easily edited and manipulated. @@ -13,3 +17,6 @@ version | toolchain ``20230313`` | ``GCC/11.3.0`` ``20230313`` | ``GCC/12.3.0`` ``20230313`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/thirdorder.md b/docs/version-specific/supported-software/t/thirdorder.md index 8e1e5d795..b3ffa200b 100644 --- a/docs/version-specific/supported-software/t/thirdorder.md +++ b/docs/version-specific/supported-software/t/thirdorder.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # thirdorder A Python script to help create input files for computing anhamonic interatomic force constants, harnessing the symmetries of the system to minimize the number of required DFT calculations. A second mode of operation allows the user to build the third-order IFC matrix from the results of those runs. @@ -7,3 +11,6 @@ A Python script to help create input files for computing anhamonic interatomic f version | toolchain --------|---------- ``1.1.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/thurstonianIRT.md b/docs/version-specific/supported-software/t/thurstonianIRT.md index f8d752ba9..d99219856 100644 --- a/docs/version-specific/supported-software/t/thurstonianIRT.md +++ b/docs/version-specific/supported-software/t/thurstonianIRT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # thurstonianIRT Fit Thurstonian IRT models in R using Stan, lavaan, or Mplus @@ -7,3 +11,6 @@ Fit Thurstonian IRT models in R using Stan, lavaan, or Mplus version | versionsuffix | toolchain --------|---------------|---------- ``0.9.0`` | ``-R-3.6.0`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tidybayes.md b/docs/version-specific/supported-software/t/tidybayes.md index 6ddd015ea..bc8d99a2c 100644 --- a/docs/version-specific/supported-software/t/tidybayes.md +++ b/docs/version-specific/supported-software/t/tidybayes.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tidybayes Compose data for and extract, manipulate, and visualize posterior draws from Bayesian models ('JAGS', 'Stan', 'rstanarm', 'brms', 'MCMCglmm', 'coda', ...) in a tidy data format. @@ -7,3 +11,6 @@ Compose data for and extract, manipulate, and visualize posterior draws from Bay version | versionsuffix | toolchain --------|---------------|---------- ``2.1.1`` | ``-R-4.0.0`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tidymodels.md b/docs/version-specific/supported-software/t/tidymodels.md index 8d13696fe..178ed0e43 100644 --- a/docs/version-specific/supported-software/t/tidymodels.md +++ b/docs/version-specific/supported-software/t/tidymodels.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tidymodels The tidy modeling "verse" is a collection of packages for modeling and statistical analysis that share the underlying design philosophy, grammar, and data structures of the tidyverse. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.1.0`` | ``-R-4.0.0`` | ``foss/2020a`` ``1.1.0`` | | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tiktoken.md b/docs/version-specific/supported-software/t/tiktoken.md index 8000d9048..9d36455d7 100644 --- a/docs/version-specific/supported-software/t/tiktoken.md +++ b/docs/version-specific/supported-software/t/tiktoken.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tiktoken tiktoken is a fast BPE tokeniser for use with OpenAI's models @@ -7,3 +11,6 @@ tiktoken is a fast BPE tokeniser for use with OpenAI's models version | toolchain --------|---------- ``0.6.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/time.md b/docs/version-specific/supported-software/t/time.md index 6429d0702..322d9129a 100644 --- a/docs/version-specific/supported-software/t/time.md +++ b/docs/version-specific/supported-software/t/time.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # time The `time' command runs another program, then displays information about the resources used by that program, collected by the system while the program was running. @@ -16,3 +20,6 @@ version | toolchain ``1.9`` | ``GCCcore/7.3.0`` ``1.9`` | ``GCCcore/8.3.0`` ``1.9`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/timm.md b/docs/version-specific/supported-software/t/timm.md index b1dc9853e..f15bb115a 100644 --- a/docs/version-specific/supported-software/t/timm.md +++ b/docs/version-specific/supported-software/t/timm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # timm timm is a library containing SOTA computer vision models, layers, utilities, optimizers, schedulers, data-loaders, augmentations, and training/evaluation scripts. It comes packaged with >700 pretrained models, and is designed to be flexible and easy to use. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.6.13`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.9.7`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tiny-cuda-nn.md b/docs/version-specific/supported-software/t/tiny-cuda-nn.md index c2b229b79..8cf05a60e 100644 --- a/docs/version-specific/supported-software/t/tiny-cuda-nn.md +++ b/docs/version-specific/supported-software/t/tiny-cuda-nn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tiny-cuda-nn is a small, self-contained framework for training and querying neural networks. Most notably, it contains a lightning fast "fully fused" multi-layer perceptron (technical paper), a versatile multiresolution hash encoding (technical paper), as well as support for various other input encodings, losses, and optimizers. @@ -7,3 +11,6 @@ is a small, self-contained framework for training and querying neural networks. version | versionsuffix | toolchain --------|---------------|---------- ``1.6`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tmap.md b/docs/version-specific/supported-software/t/tmap.md index e7aad087f..698ddf21b 100644 --- a/docs/version-specific/supported-software/t/tmap.md +++ b/docs/version-specific/supported-software/t/tmap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tmap tmap is a very fast visualization library for large, high-dimensional data sets. Currently, tmap is available for Python. tmap's graph layouts are based on the OGDF library. @@ -7,3 +11,6 @@ tmap is a very fast visualization library for large, high-dimensional data sets. version | toolchain --------|---------- ``20220502`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tmux.md b/docs/version-specific/supported-software/t/tmux.md index 198564550..eeb505292 100644 --- a/docs/version-specific/supported-software/t/tmux.md +++ b/docs/version-specific/supported-software/t/tmux.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tmux tmux is a terminal multiplexer. It lets you switch easily between several programs in one terminal, detach them (they keep running in the background) and reattach them to a different terminal. @@ -23,3 +27,6 @@ version | toolchain ``3.4`` | ``GCCcore/13.2.0`` ``3.4`` | ``GCCcore/13.3.0`` ``3.4`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/toil.md b/docs/version-specific/supported-software/t/toil.md index a4d1650fa..f08a1c67d 100644 --- a/docs/version-specific/supported-software/t/toil.md +++ b/docs/version-specific/supported-software/t/toil.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # toil A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python. @@ -7,3 +11,6 @@ A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow eng version | toolchain --------|---------- ``5.8.0`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tokenizers.md b/docs/version-specific/supported-software/t/tokenizers.md index e0b771bf0..9eb7f2051 100644 --- a/docs/version-specific/supported-software/t/tokenizers.md +++ b/docs/version-specific/supported-software/t/tokenizers.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tokenizers Fast State-of-the-Art Tokenizers optimized for Research and Production @@ -9,3 +13,6 @@ version | toolchain ``0.12.1`` | ``GCCcore/10.3.0`` ``0.13.3`` | ``GCCcore/12.2.0`` ``0.15.2`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/topaz.md b/docs/version-specific/supported-software/t/topaz.md index 4160ba970..51a5965fd 100644 --- a/docs/version-specific/supported-software/t/topaz.md +++ b/docs/version-specific/supported-software/t/topaz.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # topaz A pipeline for particle detection in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Topaz also includes methods for micrograph denoising using deep de- noising models. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.2.5`` | | ``foss/2021a`` ``0.2.5.20230926`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.2.5.20231120`` | ``-CUDA-12.1.1`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/torchaudio.md b/docs/version-specific/supported-software/t/torchaudio.md index bd9fc67d7..81b63245f 100644 --- a/docs/version-specific/supported-software/t/torchaudio.md +++ b/docs/version-specific/supported-software/t/torchaudio.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # torchaudio Data manipulation and transformation for audio signal processing, powered by PyTorch @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.12.0`` | ``-PyTorch-1.12.0`` | ``foss/2022a`` ``0.5.0`` | ``-Python-3.7.4-PyTorch-1.4.0`` | ``foss/2019b`` ``0.5.0`` | ``-Python-3.7.4-PyTorch-1.4.0`` | ``fosscuda/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/torchdata.md b/docs/version-specific/supported-software/t/torchdata.md index 464f7d72b..5e238709c 100644 --- a/docs/version-specific/supported-software/t/torchdata.md +++ b/docs/version-specific/supported-software/t/torchdata.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # torchdata TorchData is a prototype library of common modular data loading primitives for easily constructing flexible and performant data pipelines." @@ -7,3 +11,6 @@ TorchData is a prototype library of common modular data loading primitives for e version | versionsuffix | toolchain --------|---------------|---------- ``0.3.0`` | ``-PyTorch-1.11.0-CUDA-11.3.1`` | ``foss/2021a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/torchinfo.md b/docs/version-specific/supported-software/t/torchinfo.md index 2665224c3..e28a152eb 100644 --- a/docs/version-specific/supported-software/t/torchinfo.md +++ b/docs/version-specific/supported-software/t/torchinfo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # torchinfo " Torchinfo provides information complementary to what is provided by print(your_model) in PyTorch, similar to Tensorflow's model.summary() API to view the visualization of the model, which is helpful while debugging your network. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.5.2`` | ``-PyTorch-1.7.1`` | ``foss/2020b`` ``1.5.2`` | ``-PyTorch-1.7.1`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/torchsampler.md b/docs/version-specific/supported-software/t/torchsampler.md index eb69695c4..d6fe2d9b9 100644 --- a/docs/version-specific/supported-software/t/torchsampler.md +++ b/docs/version-specific/supported-software/t/torchsampler.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # torchsampler A (PyTorch) imbalanced dataset sampler for oversampling low classes and undersampling high frequent ones. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.1.2`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.1.2`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/torchtext.md b/docs/version-specific/supported-software/t/torchtext.md index fba50883c..5ab3a80d0 100644 --- a/docs/version-specific/supported-software/t/torchtext.md +++ b/docs/version-specific/supported-software/t/torchtext.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # torchtext Data loaders and abstractions for text and NLP @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``0.7.0`` | ``-Python-3.7.4-PyTorch-1.6.0`` | ``fosscuda/2019b`` ``0.8.1`` | ``-PyTorch-1.7.1`` | ``fosscuda/2020b`` ``0.9.1`` | ``-PyTorch-1.8.1`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/torchvf.md b/docs/version-specific/supported-software/t/torchvf.md index 81c84ae44..738c9add0 100644 --- a/docs/version-specific/supported-software/t/torchvf.md +++ b/docs/version-specific/supported-software/t/torchvf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # torchvf TorchVF is a unifying Python library for using vector fields for efficient proposal-free instance segmentation. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.1.3`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``0.1.3`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/torchvision.md b/docs/version-specific/supported-software/t/torchvision.md index 2a2d88fa9..e37abb0a6 100644 --- a/docs/version-specific/supported-software/t/torchvision.md +++ b/docs/version-specific/supported-software/t/torchvision.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # torchvision Datasets, Transforms and Models specific to Computer Vision @@ -34,3 +38,6 @@ version | versionsuffix | toolchain ``0.8.2`` | ``-PyTorch-1.7.1`` | ``fosscuda/2020b`` ``0.9.1`` | ``-Python-3.7.4-PyTorch-1.8.1`` | ``fosscuda/2019b`` ``0.9.1`` | ``-PyTorch-1.8.1`` | ``fosscuda/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tornado.md b/docs/version-specific/supported-software/t/tornado.md index 49c13e856..0e3cc1a92 100644 --- a/docs/version-specific/supported-software/t/tornado.md +++ b/docs/version-specific/supported-software/t/tornado.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tornado Tornado is a Python web framework and asynchronous networking library. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``6.3.2`` | ``GCCcore/12.3.0`` ``6.4`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tox.md b/docs/version-specific/supported-software/t/tox.md index 047bf7e4e..a7cac2581 100644 --- a/docs/version-specific/supported-software/t/tox.md +++ b/docs/version-specific/supported-software/t/tox.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tox tox aims to automate and standardize testing in Python @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.25.1`` | ``GCCcore/10.2.0`` ``3.25.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tqdm.md b/docs/version-specific/supported-software/t/tqdm.md index bd357b1cb..63cda146b 100644 --- a/docs/version-specific/supported-software/t/tqdm.md +++ b/docs/version-specific/supported-software/t/tqdm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tqdm A fast, extensible progress bar for Python and CLI @@ -24,3 +28,6 @@ version | versionsuffix | toolchain ``4.64.1`` | | ``GCCcore/12.2.0`` ``4.66.1`` | | ``GCCcore/12.3.0`` ``4.66.2`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/travis.md b/docs/version-specific/supported-software/t/travis.md index c2a55a1d0..5a977fae7 100644 --- a/docs/version-specific/supported-software/t/travis.md +++ b/docs/version-specific/supported-software/t/travis.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # travis Travis CI Client (CLI and Ruby library) @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.8.2`` | ``-Ruby-2.3.1`` | ``system`` ``1.8.4`` | ``-Ruby-2.3.3`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/treatSens.md b/docs/version-specific/supported-software/t/treatSens.md index e12951980..67af16f00 100644 --- a/docs/version-specific/supported-software/t/treatSens.md +++ b/docs/version-specific/supported-software/t/treatSens.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # treatSens Utilities to investigate sensitivity to unmeasured confounding in parametric models with either binary or continuous treatment. @@ -7,3 +11,6 @@ Utilities to investigate sensitivity to unmeasured confounding in parametric mod version | versionsuffix | toolchain --------|---------------|---------- ``3.0-20201002`` | ``-R-4.0.0`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/trimAl.md b/docs/version-specific/supported-software/t/trimAl.md index e85c9fada..ee735b2ca 100644 --- a/docs/version-specific/supported-software/t/trimAl.md +++ b/docs/version-specific/supported-software/t/trimAl.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # trimAl EVB, FEP and LIE simulator. @@ -13,3 +17,6 @@ version | toolchain ``1.4.1`` | ``GCCcore/12.3.0`` ``1.4.1`` | ``GCCcore/9.3.0`` ``1.4.1`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/trimesh.md b/docs/version-specific/supported-software/t/trimesh.md index c5e697816..9659bd645 100644 --- a/docs/version-specific/supported-software/t/trimesh.md +++ b/docs/version-specific/supported-software/t/trimesh.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # trimesh Trimesh is a Python (2.7- 3.3+) library for loading and using triangular meshes with an emphasis on watertight meshes. The goal of the library is to provide a fully featured Trimesh object which allows for easy manipulation and analysis, in the style of the excellent Polygon object in the Shapely library. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.17.1`` | ``foss/2022a`` ``3.21.5`` | ``gfbf/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tseriesEntropy.md b/docs/version-specific/supported-software/t/tseriesEntropy.md index 63f8a72f6..0862e6e3f 100644 --- a/docs/version-specific/supported-software/t/tseriesEntropy.md +++ b/docs/version-specific/supported-software/t/tseriesEntropy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tseriesEntropy Implements an Entropy measure of dependence based on the Bhattacharya-Hellinger-Matusita distance. Can be used as a (nonlinear) autocorrelation/crosscorrelation function for continuous and categorical time series. The package includes tests for serial dependence and nonlinearity based on it. Some routines have a parallel version that can be used in a multicore/cluster environment. The package makes use of S4 classes. @@ -7,3 +11,6 @@ Implements an Entropy measure of dependence based on the Bhattacharya-Hellinger- version | versionsuffix | toolchain --------|---------------|---------- ``0.6-0`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tsne.md b/docs/version-specific/supported-software/t/tsne.md index 94e3bc90e..b73a5d287 100644 --- a/docs/version-specific/supported-software/t/tsne.md +++ b/docs/version-specific/supported-software/t/tsne.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tsne Python library containing T-SNE algorithms. @@ -7,3 +11,6 @@ Python library containing T-SNE algorithms. version | versionsuffix | toolchain --------|---------------|---------- ``0.1.8`` | ``-Python-2.7.16`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/turbinesFoam.md b/docs/version-specific/supported-software/t/turbinesFoam.md index c5e3c0689..33c6ce24d 100644 --- a/docs/version-specific/supported-software/t/turbinesFoam.md +++ b/docs/version-specific/supported-software/t/turbinesFoam.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # turbinesFoam turbinesFoam is a library for simulating wind and marine hydrokinetic turbines in OpenFOAM using the actuator line method. @@ -7,3 +11,6 @@ turbinesFoam is a library for simulating wind and marine hydrokinetic turbines i version | versionsuffix | toolchain --------|---------------|---------- ``20220516`` | ``-OpenFOAM-8`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tvb-data.md b/docs/version-specific/supported-software/t/tvb-data.md index 2cac1bfd4..f6af38e7c 100644 --- a/docs/version-specific/supported-software/t/tvb-data.md +++ b/docs/version-specific/supported-software/t/tvb-data.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tvb-data The Virtual Brain Project (TVB Project) has the purpose of offering some modern tools to the Neurosciences community, for computing, simulating and analyzing functional and structural data of human brains. Various demonstration data for use with TVB. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.5`` | ``-Python-2.7.11`` | ``intel/2016a`` ``20150915`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tvb-framework.md b/docs/version-specific/supported-software/t/tvb-framework.md index 55295bf7f..cdf03aea8 100644 --- a/docs/version-specific/supported-software/t/tvb-framework.md +++ b/docs/version-specific/supported-software/t/tvb-framework.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tvb-framework The Virtual Brain Project (TVB Project) has the purpose of offering some modern tools to the Neurosciences community, for computing, simulating and analyzing functional and structural data of human brains. TVB Scientific Library is the most important scientific contribution of TVB Project. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.5`` | ``-Python-2.7.11`` | ``intel/2016a`` ``20150921`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/tvb-library.md b/docs/version-specific/supported-software/t/tvb-library.md index 8e7a23321..31da156b9 100644 --- a/docs/version-specific/supported-software/t/tvb-library.md +++ b/docs/version-specific/supported-software/t/tvb-library.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # tvb-library The Virtual Brain Project (TVB Project) has the purpose of offering some modern tools to the Neurosciences community, for computing, simulating and analyzing functional and structural data of human brains. TVB Scientific Library is the most important scientific contribution of TVB Project. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.5`` | ``-Python-2.7.11`` | ``intel/2016a`` ``20150922`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/t/typing-extensions.md b/docs/version-specific/supported-software/t/typing-extensions.md index f2c539da5..64650e3cc 100644 --- a/docs/version-specific/supported-software/t/typing-extensions.md +++ b/docs/version-specific/supported-software/t/typing-extensions.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # typing-extensions Typing Extensions – Backported and Experimental Type Hints for Python @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``4.4.0`` | | ``GCCcore/10.3.0`` ``4.9.0`` | | ``GCCcore/12.2.0`` ``4.9.0`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/UCC-CUDA.md b/docs/version-specific/supported-software/u/UCC-CUDA.md index 46d607190..81fc8598d 100644 --- a/docs/version-specific/supported-software/u/UCC-CUDA.md +++ b/docs/version-specific/supported-software/u/UCC-CUDA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # UCC-CUDA UCC (Unified Collective Communication) is a collective communication operations API and library that is flexible, complete, and feature-rich for current and emerging programming models and runtimes. This module adds the UCC CUDA support. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.0.0`` | ``-CUDA-11.7.0`` | ``GCCcore/11.3.0`` ``1.1.0`` | ``-CUDA-12.0.0`` | ``GCCcore/12.2.0`` ``1.2.0`` | ``-CUDA-12.1.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/UCC.md b/docs/version-specific/supported-software/u/UCC.md index f4edad89a..add0a2546 100644 --- a/docs/version-specific/supported-software/u/UCC.md +++ b/docs/version-specific/supported-software/u/UCC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # UCC UCC (Unified Collective Communication) is a collective communication operations API and library that is flexible, complete, and feature-rich for current and emerging programming models and runtimes. @@ -11,3 +15,6 @@ version | toolchain ``1.2.0`` | ``GCCcore/12.3.0`` ``1.2.0`` | ``GCCcore/13.2.0`` ``1.3.0`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/UCLUST.md b/docs/version-specific/supported-software/u/UCLUST.md index 04b25885b..63e7abe3a 100644 --- a/docs/version-specific/supported-software/u/UCLUST.md +++ b/docs/version-specific/supported-software/u/UCLUST.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # UCLUST UCLUST: Extreme high-speed sequence clustering, alignment and database search. @@ -7,3 +11,6 @@ UCLUST: Extreme high-speed sequence clustering, alignment and database search. version | versionsuffix | toolchain --------|---------------|---------- ``1.2.22q`` | ``-i86linux64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/UCX-CUDA.md b/docs/version-specific/supported-software/u/UCX-CUDA.md index bd6f62e42..12bc67774 100644 --- a/docs/version-specific/supported-software/u/UCX-CUDA.md +++ b/docs/version-specific/supported-software/u/UCX-CUDA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # UCX-CUDA Unified Communication X An open-source production grade communication framework for data centric and high-performance applications This module adds the UCX CUDA support. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``1.13.1`` | ``-CUDA-12.0.0`` | ``GCCcore/12.2.0`` ``1.14.1`` | ``-CUDA-12.1.1`` | ``GCCcore/12.3.0`` ``1.15.0`` | ``-CUDA-12.4.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/UCX-ROCm.md b/docs/version-specific/supported-software/u/UCX-ROCm.md index d4b8c956a..821d28bbf 100644 --- a/docs/version-specific/supported-software/u/UCX-ROCm.md +++ b/docs/version-specific/supported-software/u/UCX-ROCm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # UCX-ROCm Unified Communication X An open-source production grade communication framework for data centric and high-performance applications This module adds the UCX ROCm support. @@ -7,3 +11,6 @@ Unified Communication X An open-source production grade communication framework version | versionsuffix | toolchain --------|---------------|---------- ``1.11.2`` | ``-ROCm-4.5.0`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/UCX.md b/docs/version-specific/supported-software/u/UCX.md index 6573fd964..61f02644e 100644 --- a/docs/version-specific/supported-software/u/UCX.md +++ b/docs/version-specific/supported-software/u/UCX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # UCX Unified Communication X An open-source production grade communication framework for data centric and high-performance applications @@ -34,3 +38,6 @@ version | versionsuffix | toolchain ``1.9.0`` | ``-CUDA-11.1.1`` | ``GCCcore/10.2.0`` ``1.9.0`` | ``-CUDA-11.2.1`` | ``GCCcore/10.2.0`` ``1.9.0`` | | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/UDUNITS.md b/docs/version-specific/supported-software/u/UDUNITS.md index 6b8670d21..fca38affb 100644 --- a/docs/version-specific/supported-software/u/UDUNITS.md +++ b/docs/version-specific/supported-software/u/UDUNITS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # UDUNITS UDUNITS supports conversion of unit specifications between formatted and binary forms, arithmetic manipulation of units, and conversion of values between compatible scales of measurement. @@ -28,3 +32,6 @@ version | toolchain ``2.2.28`` | ``GCCcore/12.2.0`` ``2.2.28`` | ``GCCcore/12.3.0`` ``2.2.28`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/UFL.md b/docs/version-specific/supported-software/u/UFL.md index 882ec0e07..8d61b2869 100644 --- a/docs/version-specific/supported-software/u/UFL.md +++ b/docs/version-specific/supported-software/u/UFL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # UFL The Unified Form Language (UFL) is a domain specific language for declaration of finite element discretizations of variational forms. More precisely, it defines a flexible interface for choosing finite element spaces and defining expressions for weak forms in a notation close to mathematical notation. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``2018.1.0`` | ``-Python-3.6.4`` | ``foss/2018a`` ``2019.1.0`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/UMI-tools.md b/docs/version-specific/supported-software/u/UMI-tools.md index 1ff095a57..df1034d3b 100644 --- a/docs/version-specific/supported-software/u/UMI-tools.md +++ b/docs/version-specific/supported-software/u/UMI-tools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # UMI-tools Tools for handling Unique Molecular Identifiers in NGS data sets @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``1.0.1`` | ``-Python-3.7.4`` | ``foss/2019b`` ``1.0.1`` | ``-Python-3.8.2`` | ``foss/2020a`` ``1.1.4`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/UNAFold.md b/docs/version-specific/supported-software/u/UNAFold.md index 2f09b776e..e251c1c23 100644 --- a/docs/version-specific/supported-software/u/UNAFold.md +++ b/docs/version-specific/supported-software/u/UNAFold.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # UNAFold The UNAFold package contains several programs for performing energy minimization and partition function calculations on nucleic acid sequences. @@ -7,3 +11,6 @@ The UNAFold package contains several programs for performing energy minimization version | versionsuffix | toolchain --------|---------------|---------- ``3.8`` | ``-Perl-5.24.1`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/UQTk.md b/docs/version-specific/supported-software/u/UQTk.md index 9bdc81715..35879eea1 100644 --- a/docs/version-specific/supported-software/u/UQTk.md +++ b/docs/version-specific/supported-software/u/UQTk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # UQTk The UQ Toolkit (UQTk) is a collection of libraries and tools for the quantification of uncertainty in numerical model predictions. @@ -7,3 +11,6 @@ The UQ Toolkit (UQTk) is a collection of libraries and tools for the quantifica version | versionsuffix | toolchain --------|---------------|---------- ``3.1.0`` | ``-Python-3.7.4`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/USEARCH.md b/docs/version-specific/supported-software/u/USEARCH.md index 7c58225f5..36e2eaca2 100644 --- a/docs/version-specific/supported-software/u/USEARCH.md +++ b/docs/version-specific/supported-software/u/USEARCH.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # USEARCH USEARCH is a unique sequence analysis tool which offers search and clustering algorithms that are often orders of magnitude faster than BLAST. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``5.2.236-6.1.544`` | ``-i86linux32`` | ``system`` ``5.2.236`` | ``-i86linux32`` | ``system`` ``6.1.544`` | ``-i86linux32`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/USPEX.md b/docs/version-specific/supported-software/u/USPEX.md index 38262323e..776d4925c 100644 --- a/docs/version-specific/supported-software/u/USPEX.md +++ b/docs/version-specific/supported-software/u/USPEX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # USPEX USPEX (Universal Structure Predictor: Evolutionary Xtallography... and in Russian "uspekh" means "success" - owing to the high success rate and many useful results produced by this method) is a method developed by the Oganov laboratory since 2004. The problem of crystal structure prediction is very old and does, in fact, constitute the central problem of theoretical crystal chemistry. USPEX can also be used for finding low-energy metastable phases, as well as stable structures of nanoparticles, surface reconstructions, molecular packings in organic crystals, and for searching for materials with desired physical (mechanical, electronic) properties. The USPEX code is based on an efficient evolutionary algorithm developed by A.R. Oganov's group, but also has options for using alternative methods (random sampling, metadynamics, corrected particle swarm optimization algorithms). USPEX is interfaced with many ab initio codes, such as VASP, SIESTA, GULP, Quantum Espresso, CP2K, CASTEP, LAMMPS, and so on. @@ -7,3 +11,6 @@ USPEX (Universal Structure Predictor: Evolutionary Xtallography... and in Russi version | versionsuffix | toolchain --------|---------------|---------- ``9.4.4`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/UShER.md b/docs/version-specific/supported-software/u/UShER.md index 179501afe..d9942d371 100644 --- a/docs/version-specific/supported-software/u/UShER.md +++ b/docs/version-specific/supported-software/u/UShER.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # UShER UShER is now a package consisting of a family of programs for rapid phylogenetic analyses, particularly suitable for the SARS-CoV-2 genomes. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.4.1`` | ``gompi/2020b`` ``0.5.0`` | ``gompi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/Ultralytics.md b/docs/version-specific/supported-software/u/Ultralytics.md index 4249f41c5..98a4b3165 100644 --- a/docs/version-specific/supported-software/u/Ultralytics.md +++ b/docs/version-specific/supported-software/u/Ultralytics.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Ultralytics Ultralytics YOLOv8 is a cutting-edge, state-of-the-art (SOTA) model that builds upon the success of previous YOLO versions and introduces new features and improvements to further boost performance and flexibility. YOLOv8 is designed to be fast, accurate, and easy to use, making it an excellent choice for a wide range of object detection and tracking, instance segmentation, image classification and pose estimation tasks. @@ -7,3 +11,6 @@ Ultralytics YOLOv8 is a cutting-edge, state-of-the-art (SOTA) model that builds version | versionsuffix | toolchain --------|---------------|---------- ``8.0.92`` | ``-CUDA-11.7.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/UnZip.md b/docs/version-specific/supported-software/u/UnZip.md index d89aef620..b7e191258 100644 --- a/docs/version-specific/supported-software/u/UnZip.md +++ b/docs/version-specific/supported-software/u/UnZip.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # UnZip UnZip is an extraction utility for archives compressed in .zip format (also called "zipfiles"). Although highly compatible both with PKWARE's PKZIP and PKUNZIP utilities for MS-DOS and with Info-ZIP's own Zip program, our primary objectives have been portability and non-MSDOS functionality. @@ -21,3 +25,6 @@ version | toolchain ``6.0`` | ``GCCcore/8.3.0`` ``6.0`` | ``GCCcore/9.3.0`` ``6.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/UniFrac.md b/docs/version-specific/supported-software/u/UniFrac.md index ff3f1172d..038df3da4 100644 --- a/docs/version-specific/supported-software/u/UniFrac.md +++ b/docs/version-specific/supported-software/u/UniFrac.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # UniFrac UniFrac is the de facto repository for high-performance phylogenetic diversity calculations. The methods in this repository are based on an implementation of the Strided State UniFrac algorithm which is faster, and uses less memory than Fast UniFrac. Strided State UniFrac supports Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance Adjusted UniFrac and meta UniFrac, in both double and single precision (fp32). This repository also includes Stacked Faith (manuscript in preparation), a method for calculating Faith's PD that is faster and uses less memory than the Fast UniFrac-based reference implementation. @@ -7,3 +11,6 @@ UniFrac is the de facto repository for high-performance phylogenetic diversity c version | toolchain --------|---------- ``1.3.2`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/Unicycler.md b/docs/version-specific/supported-software/u/Unicycler.md index d1d312526..18644ad45 100644 --- a/docs/version-specific/supported-software/u/Unicycler.md +++ b/docs/version-specific/supported-software/u/Unicycler.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Unicycler Unicycler is an assembly pipeline for bacterial genomes. It can assemble Illumina-only read sets where it functions as a SPAdes-optimiser. It can also assembly long-read-only sets (PacBio or Nanopore) where it runs a miniasm+Racon pipeline. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.4.8`` | ``-Python-3.8.2`` | ``gompi/2020a`` ``0.4.9`` | | ``gompi/2021a`` ``0.5.0`` | | ``gompi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/Unidecode.md b/docs/version-specific/supported-software/u/Unidecode.md index 1b7edb081..3718861ff 100644 --- a/docs/version-specific/supported-software/u/Unidecode.md +++ b/docs/version-specific/supported-software/u/Unidecode.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Unidecode Python library for lossy ASCII transliterations of Unicode text (port of Text::Unidecode Perl module) @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.1.1`` | ``-Python-3.7.4`` | ``GCCcore/8.3.0`` ``1.3.6`` | | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/index.md b/docs/version-specific/supported-software/u/index.md index 0c45e8d45..0a4fbd9f6 100644 --- a/docs/version-specific/supported-software/u/index.md +++ b/docs/version-specific/supported-software/u/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (u) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - *u* - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [UCC](UCC.md) * [UCC-CUDA](UCC-CUDA.md) * [UCLUST](UCLUST.md) diff --git a/docs/version-specific/supported-software/u/ucx-py.md b/docs/version-specific/supported-software/u/ucx-py.md index 3188986e9..500e994d9 100644 --- a/docs/version-specific/supported-software/u/ucx-py.md +++ b/docs/version-specific/supported-software/u/ucx-py.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ucx-py UCX-Py is the Python interface for UCX, a low-level high-performance networking library. UCX and UCX-Py supports several transport methods including InfiniBand and NVLink while still using traditional networking protocols like TCP. @@ -7,3 +11,6 @@ UCX-Py is the Python interface for UCX, a low-level high-performance networking version | toolchain --------|---------- ``0.21.0`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/udocker.md b/docs/version-specific/supported-software/u/udocker.md index 9c95c1718..ad96a0d64 100644 --- a/docs/version-specific/supported-software/u/udocker.md +++ b/docs/version-specific/supported-software/u/udocker.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # udocker A basic user tool to execute simple docker containers in batch or interactive systems without root privileges. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.1.1`` | ``-Python-2.7.14`` | ``foss/2017b`` ``1.1.3`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/umap-learn.md b/docs/version-specific/supported-software/u/umap-learn.md index 6e9250145..170156381 100644 --- a/docs/version-specific/supported-software/u/umap-learn.md +++ b/docs/version-specific/supported-software/u/umap-learn.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # umap-learn Uniform Manifold Approximation and Projection (UMAP) is a dimension reduction technique that can be used for visualisation similarly to t-SNE, but also for general non-linear dimension reduction. @@ -13,3 +17,6 @@ version | toolchain ``0.5.3`` | ``foss/2021b`` ``0.5.3`` | ``foss/2022a`` ``0.5.5`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/umi4cPackage.md b/docs/version-specific/supported-software/u/umi4cPackage.md index 9c1ef9119..c09060aaf 100644 --- a/docs/version-specific/supported-software/u/umi4cPackage.md +++ b/docs/version-specific/supported-software/u/umi4cPackage.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # umi4cPackage umi4cPackage is a processing and analysis pipeline for UMI-4C experiment. @@ -7,3 +11,6 @@ umi4cPackage is a processing and analysis pipeline for UMI-4C experiment. version | versionsuffix | toolchain --------|---------------|---------- ``20200116`` | ``-R-4.0.0`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/umis.md b/docs/version-specific/supported-software/u/umis.md index ce41f33b3..8d7727dab 100644 --- a/docs/version-specific/supported-software/u/umis.md +++ b/docs/version-specific/supported-software/u/umis.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # umis Package for estimating UMI counts in Transcript Tag Counting data. @@ -7,3 +11,6 @@ Package for estimating UMI counts in Transcript Tag Counting data. version | toolchain --------|---------- ``1.0.3`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/uncertainties.md b/docs/version-specific/supported-software/u/uncertainties.md index 8f0480d71..371d7c1d9 100644 --- a/docs/version-specific/supported-software/u/uncertainties.md +++ b/docs/version-specific/supported-software/u/uncertainties.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # uncertainties Transparent calculations with uncertainties on the quantities involved (aka error propagation); fast calculation of derivatives @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.1.7`` | ``foss/2021b`` ``3.1.7`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/uncertainty-calibration.md b/docs/version-specific/supported-software/u/uncertainty-calibration.md index 5c786de2e..8da292bec 100644 --- a/docs/version-specific/supported-software/u/uncertainty-calibration.md +++ b/docs/version-specific/supported-software/u/uncertainty-calibration.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # uncertainty-calibration Python library to measure the calibration error of models, including confidence intervals computed by Bootstrap resampling, and code to recalibrate models. @@ -7,3 +11,6 @@ Python library to measure the calibration error of models, including confidence version | toolchain --------|---------- ``0.0.9`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/unicore-uftp.md b/docs/version-specific/supported-software/u/unicore-uftp.md index cf00d82ed..374805c50 100644 --- a/docs/version-specific/supported-software/u/unicore-uftp.md +++ b/docs/version-specific/supported-software/u/unicore-uftp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # unicore-uftp UNICORE Java-based client for UFTP @@ -7,3 +11,6 @@ UNICORE Java-based client for UFTP version | versionsuffix | toolchain --------|---------------|---------- ``1.4.2`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/unifdef.md b/docs/version-specific/supported-software/u/unifdef.md index e5a48a0df..d80aa190e 100644 --- a/docs/version-specific/supported-software/u/unifdef.md +++ b/docs/version-specific/supported-software/u/unifdef.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # unifdef unifdef - selectively remove C preprocessor conditionals The unifdef utility selectively processes conditional C preprocessor and the additional text that they delimit, while otherwise leaving the file alone. @@ -7,3 +11,6 @@ unifdef - selectively remove C preprocessor conditionals The unifdef utility sel version | toolchain --------|---------- ``2.12`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/unimap.md b/docs/version-specific/supported-software/u/unimap.md index 22f4e9213..0ea9535cc 100644 --- a/docs/version-specific/supported-software/u/unimap.md +++ b/docs/version-specific/supported-software/u/unimap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # unimap Unimap is a fork of minimap2 optimized for assembly-to-reference alignment. It integrates the minigraph chaining algorithm and can align through long INDELs (up to 100kb by default) much faster than minimap2. Unimap is a better fit for resolving segmental duplications and is recommended over minimap2 for alignment between high-quality assemblies. Unimap does not replace minimap2 for other types of alignment. It drops the support of multi-part index and short-read mapping. Its long-read alignment is different from minimap2 but is not necessarily better. Unimap is more of a specialized minimap2 at the moment. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.1`` | ``GCCcore/10.2.0`` ``0.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/units.md b/docs/version-specific/supported-software/u/units.md index 12ee6140f..cc65c032c 100644 --- a/docs/version-specific/supported-software/u/units.md +++ b/docs/version-specific/supported-software/u/units.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # units GNU Units converts quantities expressed in various systems of measurement to their equivalents in other systems of measurement. Like many similar programs, it can handle multiplicative scale changes. It can also handle nonlinear conversions such as Fahrenheit to Celsius or wire gauge, and it can convert from and to sums of units, such as converting between meters and feet plus inches. @@ -7,3 +11,6 @@ GNU Units converts quantities expressed in various systems of measurement to the version | toolchain --------|---------- ``2.19`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/unixODBC.md b/docs/version-specific/supported-software/u/unixODBC.md index c40d113c6..b7a08f91a 100644 --- a/docs/version-specific/supported-software/u/unixODBC.md +++ b/docs/version-specific/supported-software/u/unixODBC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # unixODBC unixODBC provides a uniform interface between application and database driver @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.3.11`` | ``foss/2022b`` ``2.3.7`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/unrar.md b/docs/version-specific/supported-software/u/unrar.md index 79a1f4175..559ddef09 100644 --- a/docs/version-specific/supported-software/u/unrar.md +++ b/docs/version-specific/supported-software/u/unrar.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # unrar RAR is a powerful archive manager. @@ -9,3 +13,6 @@ version | toolchain ``5.6.1`` | ``GCCcore/7.3.0`` ``5.7.3`` | ``GCCcore/8.2.0`` ``6.0.2`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/utf8proc.md b/docs/version-specific/supported-software/u/utf8proc.md index 177bb0a7d..78cca670d 100644 --- a/docs/version-specific/supported-software/u/utf8proc.md +++ b/docs/version-specific/supported-software/u/utf8proc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # utf8proc utf8proc is a small, clean C library that provides Unicode normalization, case-folding, and other operations for data in the UTF-8 encoding. @@ -16,3 +20,6 @@ version | toolchain ``2.7.0`` | ``GCCcore/11.3.0`` ``2.8.0`` | ``GCCcore/12.2.0`` ``2.8.0`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/u/util-linux.md b/docs/version-specific/supported-software/u/util-linux.md index 37fdfec8b..12b71a391 100644 --- a/docs/version-specific/supported-software/u/util-linux.md +++ b/docs/version-specific/supported-software/u/util-linux.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # util-linux Set of Linux utilities @@ -34,3 +38,6 @@ version | toolchain ``2.39`` | ``GCCcore/12.3.0`` ``2.39`` | ``GCCcore/13.2.0`` ``2.40`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/V8.md b/docs/version-specific/supported-software/v/V8.md index ec6858035..dcfe12d29 100644 --- a/docs/version-specific/supported-software/v/V8.md +++ b/docs/version-specific/supported-software/v/V8.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # V8 R interface to Google's open source JavaScript engine @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``2.3`` | ``-R-3.6.0`` | ``intel/2019a`` ``3.2.0`` | ``-R-3.6.2`` | ``foss/2019b`` ``3.4.0`` | ``-R-4.0.0`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VAMPIRE-ASM.md b/docs/version-specific/supported-software/v/VAMPIRE-ASM.md index 94240df80..a80dc6c0c 100644 --- a/docs/version-specific/supported-software/v/VAMPIRE-ASM.md +++ b/docs/version-specific/supported-software/v/VAMPIRE-ASM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VAMPIRE-ASM Vampire is designed from the ground-up to be an easy to use, fast, open-source and extensible software package capable of modelling almost any magnetic material with atomic resolution. @@ -7,3 +11,6 @@ Vampire is designed from the ground-up to be an easy to use, fast, open-source version | toolchain --------|---------- ``6.0`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VASP.md b/docs/version-specific/supported-software/v/VASP.md index a21b65914..5bca2245a 100644 --- a/docs/version-specific/supported-software/v/VASP.md +++ b/docs/version-specific/supported-software/v/VASP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VASP The Vienna Ab initio Simulation Package (VASP) is a computer program for atomic scale materials modelling, e.g. electronic structure calculations and quantum-mechanical molecular dynamics, from first principles. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``5.4.1`` | ``intel/2016.02-GCC-4.9`` ``6.3.2`` | ``nvofbf/2022.07`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VAtools.md b/docs/version-specific/supported-software/v/VAtools.md index e29de870c..5e3e56309 100644 --- a/docs/version-specific/supported-software/v/VAtools.md +++ b/docs/version-specific/supported-software/v/VAtools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VAtools VAtools is a python package that includes several tools to annotate VCF files with data from other tools. @@ -7,3 +11,6 @@ VAtools is a python package that includes several tools to annotate VCF files w version | versionsuffix | toolchain --------|---------------|---------- ``3.0.1`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VBZ-Compression.md b/docs/version-specific/supported-software/v/VBZ-Compression.md index c0ecd1e91..c33ee7274 100644 --- a/docs/version-specific/supported-software/v/VBZ-Compression.md +++ b/docs/version-specific/supported-software/v/VBZ-Compression.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VBZ-Compression VBZ compression HDF5 plugin for nanopolish @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.1`` | ``gompi/2020b`` ``1.0.3`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VCF-kit.md b/docs/version-specific/supported-software/v/VCF-kit.md index 3a2957c53..b3bafaa57 100644 --- a/docs/version-specific/supported-software/v/VCF-kit.md +++ b/docs/version-specific/supported-software/v/VCF-kit.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VCF-kit VCF-kit is a command-line based collection of utilities for performing analysis on Variant Call Format (VCF) files. @@ -7,3 +11,6 @@ VCF-kit is a command-line based collection of utilities for performing analysis version | versionsuffix | toolchain --------|---------------|---------- ``0.1.6`` | ``-Python-2.7.15`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VCFtools.md b/docs/version-specific/supported-software/v/VCFtools.md index a8e02fe46..734310279 100644 --- a/docs/version-specific/supported-software/v/VCFtools.md +++ b/docs/version-specific/supported-software/v/VCFtools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VCFtools The aim of VCFtools is to provide easily accessible methods for working with complex genetic variation data in the form of VCF files. @@ -23,3 +27,6 @@ version | versionsuffix | toolchain ``0.1.16`` | ``-Perl-5.28.0`` | ``foss/2018b`` ``0.1.16`` | | ``iccifort/2019.5.281`` ``0.1.16`` | ``-Perl-5.28.0`` | ``intel/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VEGAS.md b/docs/version-specific/supported-software/v/VEGAS.md index b3492d190..6b27f4b25 100644 --- a/docs/version-specific/supported-software/v/VEGAS.md +++ b/docs/version-specific/supported-software/v/VEGAS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VEGAS VEGAS (Versatile Gene-based Association Study) is a free program for performing gene-based tests for association using the results from genetic association studies @@ -7,3 +11,6 @@ VEGAS (Versatile Gene-based Association Study) is a free program for performing version | toolchain --------|---------- ``0.8.27`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VEP.md b/docs/version-specific/supported-software/v/VEP.md index c8ae926de..2e374cfbc 100644 --- a/docs/version-specific/supported-software/v/VEP.md +++ b/docs/version-specific/supported-software/v/VEP.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VEP Variant Effect Predictor (VEP) determines the effect of your variants (SNPs, insertions, deletions, CNVs or structural variants) on genes, transcripts, and protein sequence, as well as regulatory regions. Includes EnsEMBL-XS, which provides pre-compiled replacements for frequently used routines in VEP. @@ -16,3 +20,6 @@ version | versionsuffix | toolchain ``94.5`` | ``-Perl-5.26.0`` | ``intel/2017b`` ``95.0`` | ``-Perl-5.28.0`` | ``foss/2018b`` ``96.0`` | ``-Perl-5.28.1`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VERSE.md b/docs/version-specific/supported-software/v/VERSE.md index e6b68cb68..fc3d8a8be 100644 --- a/docs/version-specific/supported-software/v/VERSE.md +++ b/docs/version-specific/supported-software/v/VERSE.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VERSE A versatile and efficient RNA-Seq read counting tool @@ -7,3 +11,6 @@ A versatile and efficient RNA-Seq read counting tool version | toolchain --------|---------- ``0.1.5`` | ``foss/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VESTA.md b/docs/version-specific/supported-software/v/VESTA.md index bb74a90b4..2aa65fc5a 100644 --- a/docs/version-specific/supported-software/v/VESTA.md +++ b/docs/version-specific/supported-software/v/VESTA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VESTA VESTA is a 3D visualization program for structured models, volumetric data such as electron/nuclear densities, and crystal morphologies. @@ -7,3 +11,6 @@ VESTA is a 3D visualization program for structured models, volumetric data su version | versionsuffix | toolchain --------|---------------|---------- ``3.5.8`` | ``-gtk3`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VMD.md b/docs/version-specific/supported-software/v/VMD.md index 0edfbac98..ecc497a05 100644 --- a/docs/version-specific/supported-software/v/VMD.md +++ b/docs/version-specific/supported-software/v/VMD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VMD VMD is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``1.9.4a51`` | | ``foss/2020b`` ``1.9.4a51`` | | ``fosscuda/2020b`` ``1.9.4a57`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VMTK.md b/docs/version-specific/supported-software/v/VMTK.md index 2d827a5a4..03b8ceec6 100644 --- a/docs/version-specific/supported-software/v/VMTK.md +++ b/docs/version-specific/supported-software/v/VMTK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VMTK vmtk is a collection of libraries and tools for 3D reconstruction, geometric analysis, mesh generation and surface data analysis for image-based modeling of blood vessels. @@ -7,3 +11,6 @@ vmtk is a collection of libraries and tools for 3D reconstruction, geometric ana version | versionsuffix | toolchain --------|---------------|---------- ``1.4.0`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VSCode.md b/docs/version-specific/supported-software/v/VSCode.md index 1c38246b7..90d525c67 100644 --- a/docs/version-specific/supported-software/v/VSCode.md +++ b/docs/version-specific/supported-software/v/VSCode.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VSCode Visual Studio Code is a lightweight but powerful source code editor which runs on your desktop and is available for Windows, macOS and Linux. It comes with built-in support for JavaScript, TypeScript and Node.js and has a rich ecosystem of extensions for other languages and runtimes (such as C++, C#, Java, Python, PHP, Go, .NET). Begin your journey with VS Code with these introductory videos. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.85.0`` | ``system`` ``1.88.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VSEARCH.md b/docs/version-specific/supported-software/v/VSEARCH.md index d919765ec..a90f16bc8 100644 --- a/docs/version-specific/supported-software/v/VSEARCH.md +++ b/docs/version-specific/supported-software/v/VSEARCH.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VSEARCH VSEARCH supports de novo and reference based chimera detection, clustering, full-length and prefix dereplication, rereplication, reverse complementation, masking, all-vs-all pairwise global alignment, exact and global alignment searching, shuffling, subsampling and sorting. It also supports FASTQ file analysis, filtering, conversion and merging of paired-end reads. @@ -13,3 +17,6 @@ version | toolchain ``2.22.1`` | ``GCC/11.3.0`` ``2.25.0`` | ``GCC/12.3.0`` ``2.9.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VTK.md b/docs/version-specific/supported-software/v/VTK.md index 97f4a94b2..590593fc4 100644 --- a/docs/version-specific/supported-software/v/VTK.md +++ b/docs/version-specific/supported-software/v/VTK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VTK The Visualization Toolkit (VTK) is an open-source, freely available software system for 3D computer graphics, image processing and visualization. VTK consists of a C++ class library and several interpreted interface layers including Tcl/Tk, Java, and Python. VTK supports a wide variety of visualization algorithms including: scalar, vector, tensor, texture, and volumetric methods; and advanced modeling techniques such as: implicit modeling, polygon reduction, mesh smoothing, cutting, contouring, and Delaunay triangulation. @@ -41,3 +45,6 @@ version | versionsuffix | toolchain ``9.2.6`` | | ``foss/2022b`` ``9.3.0`` | | ``foss/2023a`` ``9.3.0`` | | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VTune.md b/docs/version-specific/supported-software/v/VTune.md index cff658745..d5ae9bc1d 100644 --- a/docs/version-specific/supported-software/v/VTune.md +++ b/docs/version-specific/supported-software/v/VTune.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VTune Intel VTune Amplifier XE is the premier performance profiler for C, C++, C#, Fortran, Assembly and Java. @@ -30,3 +34,6 @@ version | toolchain ``2022.2.0`` | ``system`` ``2022.3.0`` | ``system`` ``2023.2.0`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VV.md b/docs/version-specific/supported-software/v/VV.md index f586d94d5..9b07a8b7a 100644 --- a/docs/version-specific/supported-software/v/VV.md +++ b/docs/version-specific/supported-software/v/VV.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VV VV is an open-source and cross platform image viewer, designed for fast and simple visualization of spatio-temporal images: 2D, 2D+t, 3D and 3D+t (or 4D) images. Only the command-line (clitk) tools are build. @@ -7,3 +11,6 @@ VV is an open-source and cross platform image viewer, designed for fast and sim version | versionsuffix | toolchain --------|---------------|---------- ``2018.09.19`` | ``-Python-3.6.6`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VXL.md b/docs/version-specific/supported-software/v/VXL.md index b9ebcaeac..ffbc672c3 100644 --- a/docs/version-specific/supported-software/v/VXL.md +++ b/docs/version-specific/supported-software/v/VXL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VXL A multi-platform collection of C++ software libraries for Computer Vision and Image Understanding. @@ -7,3 +11,6 @@ A multi-platform collection of C++ software libraries for Computer Vision and Im version | toolchain --------|---------- ``1.18.0`` | ``foss/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/Vala.md b/docs/version-specific/supported-software/v/Vala.md index aacd18643..94a986346 100644 --- a/docs/version-specific/supported-software/v/Vala.md +++ b/docs/version-specific/supported-software/v/Vala.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Vala Vala is a programming language using modern high level abstractions without imposing additional runtime requirements and without using a different ABI compared to applications and libraries written in C. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.52.4`` | ``GCCcore/10.3.0`` ``0.56.14`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/Valgrind.md b/docs/version-specific/supported-software/v/Valgrind.md index 71bd69075..d2c79a828 100644 --- a/docs/version-specific/supported-software/v/Valgrind.md +++ b/docs/version-specific/supported-software/v/Valgrind.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Valgrind Valgrind: Debugging and profiling tools @@ -26,3 +30,6 @@ version | toolchain ``3.21.0`` | ``gompi/2022b`` ``3.21.0`` | ``gompi/2023a`` ``3.23.0`` | ``gompi/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/Vamb.md b/docs/version-specific/supported-software/v/Vamb.md index 8628551d7..299ba08b9 100644 --- a/docs/version-specific/supported-software/v/Vamb.md +++ b/docs/version-specific/supported-software/v/Vamb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Vamb Vamb is a metagenomic binner which feeds sequence composition information from a contig catalogue and co-abundance information from BAM files into a variational autoencoder and clusters the latent representation. @@ -7,3 +11,6 @@ Vamb is a metagenomic binner which feeds sequence composition information from a version | versionsuffix | toolchain --------|---------------|---------- ``3.0.9`` | ``-CUDA-11.5.2`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/Vampir.md b/docs/version-specific/supported-software/v/Vampir.md index ab43bbddc..a69335a22 100644 --- a/docs/version-specific/supported-software/v/Vampir.md +++ b/docs/version-specific/supported-software/v/Vampir.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Vampir The Vampir software tool provides an easy-to-use framework that enables developers to quickly display and analyze arbitrary program behavior at any level of detail. The tool suite implements optimized event analysis algorithms and customizable displays that enable fast and interactive rendering of very complex performance monitoring data. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``8.4.1`` | ``-demo`` | ``system`` ``8.4.1`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/Vampire.md b/docs/version-specific/supported-software/v/Vampire.md index 1cc89aa73..089fd09e3 100644 --- a/docs/version-specific/supported-software/v/Vampire.md +++ b/docs/version-specific/supported-software/v/Vampire.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Vampire The Vampire Theorem Prover. @@ -7,3 +11,6 @@ The Vampire Theorem Prover. version | toolchain --------|---------- ``4.5.1`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VarDict.md b/docs/version-specific/supported-software/v/VarDict.md index 78bc0c95a..a27adc9b6 100644 --- a/docs/version-specific/supported-software/v/VarDict.md +++ b/docs/version-specific/supported-software/v/VarDict.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VarDict VarDict is an ultra sensitive variant caller for both single and paired sample variant calling from BAM files. @@ -7,3 +11,6 @@ VarDict is an ultra sensitive variant caller for both single and paired sample version | versionsuffix | toolchain --------|---------------|---------- ``1.5.7`` | ``-Perl-5.28.0`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VarScan.md b/docs/version-specific/supported-software/v/VarScan.md index 6a439f21a..1e2b6af85 100644 --- a/docs/version-specific/supported-software/v/VarScan.md +++ b/docs/version-specific/supported-software/v/VarScan.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VarScan Variant calling and somatic mutation/CNV detection for next-generation sequencing data @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.4.1`` | ``-Java-1.7.0_80`` | ``system`` ``2.4.4`` | ``-Java-1.8`` | ``system`` ``2.4.4`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VariantMetaCaller.md b/docs/version-specific/supported-software/v/VariantMetaCaller.md index c17520a60..b067d239d 100644 --- a/docs/version-specific/supported-software/v/VariantMetaCaller.md +++ b/docs/version-specific/supported-software/v/VariantMetaCaller.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VariantMetaCaller VariantMetaCaller automatically integrates variant calling pipelines into a better performing overall model that also predicts accurate variant probabilities. @@ -7,3 +11,6 @@ VariantMetaCaller automatically integrates variant calling pipelines into a bett version | toolchain --------|---------- ``1.0`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/Velvet.md b/docs/version-specific/supported-software/v/Velvet.md index a5393733e..b221e6c7b 100644 --- a/docs/version-specific/supported-software/v/Velvet.md +++ b/docs/version-specific/supported-software/v/Velvet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Velvet Sequence assembler for very short reads @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``1.2.10`` | ``-mt-kmer_191`` | ``foss/2018b`` ``1.2.10`` | ``-mt-kmer_191`` | ``foss/2023a`` ``1.2.10`` | ``-mt-kmer_37`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/ViennaRNA.md b/docs/version-specific/supported-software/v/ViennaRNA.md index 9313d119f..8a6145cce 100644 --- a/docs/version-specific/supported-software/v/ViennaRNA.md +++ b/docs/version-specific/supported-software/v/ViennaRNA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ViennaRNA The Vienna RNA Package consists of a C code library and several stand-alone programs for the prediction and comparison of RNA secondary structures. @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``2.4.14`` | ``-Python-3.6.6`` | ``foss/2018b`` ``2.5.0`` | | ``foss/2021b`` ``2.5.1`` | | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/Vim.md b/docs/version-specific/supported-software/v/Vim.md index c97b40382..1d5c8857f 100644 --- a/docs/version-specific/supported-software/v/Vim.md +++ b/docs/version-specific/supported-software/v/Vim.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Vim Vim is an advanced text editor that seeks to provide the power of the de-facto Unix editor 'Vi', with a more complete feature set. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``9.0.0950`` | | ``GCCcore/11.3.0`` ``9.0.1434`` | | ``GCCcore/12.2.0`` ``9.1.0004`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VirSorter.md b/docs/version-specific/supported-software/v/VirSorter.md index 1fd6bf686..629202c44 100644 --- a/docs/version-specific/supported-software/v/VirSorter.md +++ b/docs/version-specific/supported-software/v/VirSorter.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VirSorter VirSorter: mining viral signal from microbial genomic data. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.0.6`` | | ``foss/2021b`` ``20160601`` | ``-Perl-5.22.1`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VirSorter2.md b/docs/version-specific/supported-software/v/VirSorter2.md index a74906b57..82b35d8e1 100644 --- a/docs/version-specific/supported-software/v/VirSorter2.md +++ b/docs/version-specific/supported-software/v/VirSorter2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VirSorter2 VirSorter2 applies a multi-classifier, expert-guided approach to detect diverse DNA and RNA virus genomes. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.2.4`` | ``foss/2021b`` ``2.2.4`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VirtualGL.md b/docs/version-specific/supported-software/v/VirtualGL.md index 09096b3b8..44bb5d8cf 100644 --- a/docs/version-specific/supported-software/v/VirtualGL.md +++ b/docs/version-specific/supported-software/v/VirtualGL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VirtualGL VirtualGL is an open source toolkit that gives any Linux or Unix remote display software the ability to run OpenGL applications with full hardware acceleration. @@ -10,3 +14,6 @@ version | toolchain ``2.6.2`` | ``GCCcore/9.3.0`` ``3.0`` | ``GCC/11.2.0`` ``3.1`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/Virtuoso-opensource.md b/docs/version-specific/supported-software/v/Virtuoso-opensource.md index e39e5cae9..fafcb8982 100644 --- a/docs/version-specific/supported-software/v/Virtuoso-opensource.md +++ b/docs/version-specific/supported-software/v/Virtuoso-opensource.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Virtuoso-opensource Virtuoso is a high-performance and scalable Multi-Model RDBMS, Data Integration Middleware, Linked Data Deployment, and HTTP Application Server Platform. @@ -7,3 +11,6 @@ Virtuoso is a high-performance and scalable Multi-Model RDBMS, Data Integration version | toolchain --------|---------- ``7.2.6.1`` | ``GCC/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/VisPy.md b/docs/version-specific/supported-software/v/VisPy.md index 93d5e55a2..56bb4711c 100644 --- a/docs/version-specific/supported-software/v/VisPy.md +++ b/docs/version-specific/supported-software/v/VisPy.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # VisPy VisPy is a high-performance interactive 2D/3D data visualization library leveraging the computational power of modern Graphics Processing Units (GPUs) through the OpenGL library to display very large datasets. @@ -11,3 +15,6 @@ version | toolchain ``0.14.1`` | ``foss/2023a`` ``0.6.6`` | ``foss/2020b`` ``0.6.6`` | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/Voro++.md b/docs/version-specific/supported-software/v/Voro++.md index 37e9b2401..6a5ace0cd 100644 --- a/docs/version-specific/supported-software/v/Voro++.md +++ b/docs/version-specific/supported-software/v/Voro++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Voro++ Voro++ is a software library for carrying out three-dimensional computations of the Voronoi tessellation. A distinguishing feature of the Voro++ library is that it carries out cell-based calculations, computing the Voronoi cell for each particle individually. It is particularly well-suited for applications that rely on cell-based statistics, where features of Voronoi cells (eg. volume, centroid, number of faces) can be used to analyze a system of particles. @@ -18,3 +22,6 @@ version | toolchain ``0.4.6`` | ``foss/2019b`` ``0.4.6`` | ``intel/2016a`` ``0.4.6`` | ``intel/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/index.md b/docs/version-specific/supported-software/v/index.md index ffdd25217..181dab18a 100644 --- a/docs/version-specific/supported-software/v/index.md +++ b/docs/version-specific/supported-software/v/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (v) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - *v* - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [V8](V8.md) * [vaeda](vaeda.md) * [Vala](Vala.md) diff --git a/docs/version-specific/supported-software/v/vConTACT2.md b/docs/version-specific/supported-software/v/vConTACT2.md index bf363e24f..7dafede58 100644 --- a/docs/version-specific/supported-software/v/vConTACT2.md +++ b/docs/version-specific/supported-software/v/vConTACT2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vConTACT2 vConTACT2 is a tool to perform guilt-by-contig-association classification of viral genomic sequence data. @@ -7,3 +11,6 @@ vConTACT2 is a tool to perform guilt-by-contig-association classification of vi version | toolchain --------|---------- ``0.11.3`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/vaeda.md b/docs/version-specific/supported-software/v/vaeda.md index 405ca00be..dcd127c46 100644 --- a/docs/version-specific/supported-software/v/vaeda.md +++ b/docs/version-specific/supported-software/v/vaeda.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vaeda vaeda (variaitonal auto-encoder (vae) for doublet annotation (da)) is a Python package for doublet annotation in single cell RNA-sequencing. @@ -7,3 +11,6 @@ vaeda (variaitonal auto-encoder (vae) for doublet annotation (da)) is a Python p version | toolchain --------|---------- ``0.0.30`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/variant_tools.md b/docs/version-specific/supported-software/v/variant_tools.md index bf3e25ac0..f443d23ea 100644 --- a/docs/version-specific/supported-software/v/variant_tools.md +++ b/docs/version-specific/supported-software/v/variant_tools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # variant_tools Variant tools is a software tool for the manipulation, annotation, selection, simulation, and analysis of variants in the context of next-gen sequencing analysis. Unlike some other tools used for Next-Gen sequencing analysis, variant tools is project based and provides a whole set of tools to manipulate and analyze genetic variants. @@ -7,3 +11,6 @@ Variant tools is a software tool for the manipulation, annotation, selection, si version | versionsuffix | toolchain --------|---------------|---------- ``3.1.3`` | ``-Python-3.7.4`` | ``foss/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/vartools.md b/docs/version-specific/supported-software/v/vartools.md index 1fd2c12c5..faa463cba 100644 --- a/docs/version-specific/supported-software/v/vartools.md +++ b/docs/version-specific/supported-software/v/vartools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vartools Command line utility that provides tools for processing and analyzing astronomical time series data. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.35`` | ``foss/2016b`` ``1.35`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/vawk.md b/docs/version-specific/supported-software/v/vawk.md index 6da29600a..2f6edc3b8 100644 --- a/docs/version-specific/supported-software/v/vawk.md +++ b/docs/version-specific/supported-software/v/vawk.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vawk An awk-like VCF parser @@ -7,3 +11,6 @@ An awk-like VCF parser version | versionsuffix | toolchain --------|---------------|---------- ``0.0.1`` | ``-Python-2.7.18`` | ``GCCcore/10.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/vcflib.md b/docs/version-specific/supported-software/v/vcflib.md index c6e8a45cd..cafccc43f 100644 --- a/docs/version-specific/supported-software/v/vcflib.md +++ b/docs/version-specific/supported-software/v/vcflib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vcflib vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed genetic variations between individuals. @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``1.0.3`` | ``-R-4.1.2`` | ``foss/2021b`` ``1.0.9`` | ``-R-4.2.1`` | ``foss/2022a`` ``1.0.9`` | ``-R-4.3.2`` | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/vcfnp.md b/docs/version-specific/supported-software/v/vcfnp.md index 0fef7a214..490ec85d1 100644 --- a/docs/version-specific/supported-software/v/vcfnp.md +++ b/docs/version-specific/supported-software/v/vcfnp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vcfnp Load data from a VCF (variant call format) file into numpy arrays, and (optionally) from there into an HDF5 file. @@ -7,3 +11,6 @@ Load data from a VCF (variant call format) file into numpy arrays, and (option version | versionsuffix | toolchain --------|---------------|---------- ``2.3.0`` | ``-Python-2.7.11`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/velocyto.md b/docs/version-specific/supported-software/v/velocyto.md index 84871efcf..299d220b0 100644 --- a/docs/version-specific/supported-software/v/velocyto.md +++ b/docs/version-specific/supported-software/v/velocyto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # velocyto Velocyto is a library for the analysis of RNA velocity. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``0.17.17`` | | ``foss/2021a`` ``0.17.17`` | | ``foss/2022a`` ``0.17.17`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/verifyBamID.md b/docs/version-specific/supported-software/v/verifyBamID.md index d92900ff2..f776f9c75 100644 --- a/docs/version-specific/supported-software/v/verifyBamID.md +++ b/docs/version-specific/supported-software/v/verifyBamID.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # verifyBamID verifyBamID is a software that verifies whether the reads in particular file match previously known genotypes for an individual (or group of individuals), and checks whether the reads are contaminated as a mixture of two samples. verifyBamID can detect sample contamination and swaps when external genotypes are available. When external genotypes are not available, verifyBamID still robustly detects sample swaps. @@ -7,3 +11,6 @@ verifyBamID is a software that verifies whether the reads in particular file mat version | toolchain --------|---------- ``1.1.3`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/virtualenv.md b/docs/version-specific/supported-software/v/virtualenv.md index f2955d027..8650d6bd7 100644 --- a/docs/version-specific/supported-software/v/virtualenv.md +++ b/docs/version-specific/supported-software/v/virtualenv.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # virtualenv A tool for creating isolated virtual python environments. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20.23.1`` | ``GCCcore/12.3.0`` ``20.24.6`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/visdom.md b/docs/version-specific/supported-software/v/visdom.md index 8e6fb7ff3..6c465501c 100644 --- a/docs/version-specific/supported-software/v/visdom.md +++ b/docs/version-specific/supported-software/v/visdom.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # visdom A flexible tool for creating, organizing, and sharing visualizations of live, rich data. Supports Torch and Numpy. @@ -7,3 +11,6 @@ A flexible tool for creating, organizing, and sharing visualizations of live, ri version | toolchain --------|---------- ``0.2.4`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/vispr.md b/docs/version-specific/supported-software/v/vispr.md index 79002ff9a..cf27f05ed 100644 --- a/docs/version-specific/supported-software/v/vispr.md +++ b/docs/version-specific/supported-software/v/vispr.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vispr VISPR - A visualization framework for CRISPR data. @@ -7,3 +11,6 @@ VISPR - A visualization framework for CRISPR data. version | toolchain --------|---------- ``0.4.14`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/vitessce-python.md b/docs/version-specific/supported-software/v/vitessce-python.md index 9c91bf539..2427519f2 100644 --- a/docs/version-specific/supported-software/v/vitessce-python.md +++ b/docs/version-specific/supported-software/v/vitessce-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vitessce-python Python API and Jupyter widget facilitating interactive visualization of spatial single-cell data with Vitessce. @@ -7,3 +11,6 @@ Python API and Jupyter widget facilitating interactive visualization of spatial version | toolchain --------|---------- ``20230222`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/vitessceR.md b/docs/version-specific/supported-software/v/vitessceR.md index 05caac9df..e1a92033d 100644 --- a/docs/version-specific/supported-software/v/vitessceR.md +++ b/docs/version-specific/supported-software/v/vitessceR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vitessceR Vitessce is a visual integration tool for exploration of spatial single-cell experiments. @@ -7,3 +11,6 @@ Vitessce is a visual integration tool for exploration of spatial single-cell exp version | versionsuffix | toolchain --------|---------------|---------- ``0.99.0-20230110`` | ``-R-4.2.1`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/voltools.md b/docs/version-specific/supported-software/v/voltools.md index 7429ba259..df5769fc3 100644 --- a/docs/version-specific/supported-software/v/voltools.md +++ b/docs/version-specific/supported-software/v/voltools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # voltools CUDA-accelerated numpy 3D affine transformations @@ -7,3 +11,6 @@ CUDA-accelerated numpy 3D affine transformations version | toolchain --------|---------- ``0.4.2`` | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/vorbis-tools.md b/docs/version-specific/supported-software/v/vorbis-tools.md index 5f38a3ab3..8bd6601b5 100644 --- a/docs/version-specific/supported-software/v/vorbis-tools.md +++ b/docs/version-specific/supported-software/v/vorbis-tools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vorbis-tools Command-line tools for creating and playing Ogg Vorbis files. @@ -9,3 +13,6 @@ version | toolchain ``1.4.2`` | ``GCCcore/10.2.0`` ``1.4.2`` | ``GCCcore/10.3.0`` ``1.4.2`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/vsc-base.md b/docs/version-specific/supported-software/v/vsc-base.md index 191e0e975..32c3e88f5 100644 --- a/docs/version-specific/supported-software/v/vsc-base.md +++ b/docs/version-specific/supported-software/v/vsc-base.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vsc-base VSC-tools is a set of Python libraries and scripts that are commonly used within HPC-UGent. @@ -19,3 +23,6 @@ version | versionsuffix | toolchain ``2.8.0`` | | ``system`` ``2.8.1`` | | ``system`` ``2.8.3`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/vsc-install.md b/docs/version-specific/supported-software/v/vsc-install.md index 017179162..13804d907 100644 --- a/docs/version-specific/supported-software/v/vsc-install.md +++ b/docs/version-specific/supported-software/v/vsc-install.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vsc-install vsc-install provides shared setuptools functions and classes for Python libraries developed by UGent's HPC group @@ -15,3 +19,6 @@ version | versionsuffix | toolchain ``0.11.1`` | | ``system`` ``0.11.2`` | | ``system`` ``0.9.18`` | ``-Python-2.7.11`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/vsc-mympirun-scoop.md b/docs/version-specific/supported-software/v/vsc-mympirun-scoop.md index 5fcd2f741..6ef13c579 100644 --- a/docs/version-specific/supported-software/v/vsc-mympirun-scoop.md +++ b/docs/version-specific/supported-software/v/vsc-mympirun-scoop.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vsc-mympirun-scoop VSC-tools is a set of Python libraries and scripts that are commonly used within HPC-UGent. @@ -7,3 +11,6 @@ VSC-tools is a set of Python libraries and scripts that are commonly used within version | versionsuffix | toolchain --------|---------------|---------- ``3.4.1`` | ``-Python-2.7.12`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/vsc-mympirun.md b/docs/version-specific/supported-software/v/vsc-mympirun.md index 110502191..2cc799c3f 100644 --- a/docs/version-specific/supported-software/v/vsc-mympirun.md +++ b/docs/version-specific/supported-software/v/vsc-mympirun.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vsc-mympirun VSC-tools is a set of Python libraries and scripts that are commonly used within HPC-UGent. @@ -36,3 +40,6 @@ version | versionsuffix | toolchain ``5.3.0`` | | ``system`` ``5.3.1`` | | ``system`` ``5.4.0`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/vsc-processcontrol.md b/docs/version-specific/supported-software/v/vsc-processcontrol.md index ba67f87e3..7228c63f0 100644 --- a/docs/version-specific/supported-software/v/vsc-processcontrol.md +++ b/docs/version-specific/supported-software/v/vsc-processcontrol.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vsc-processcontrol vsc-processcontrol is a module to abstract process control like scheduler settings and affinity from actual implementations like vsc.affinity and psutil. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.0`` | ``-vsc-base-2.1.2`` | ``system`` ``1.0`` | | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/v/vt.md b/docs/version-specific/supported-software/v/vt.md index c1b15be85..b18361136 100644 --- a/docs/version-specific/supported-software/v/vt.md +++ b/docs/version-specific/supported-software/v/vt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # vt A tool set for short variant discovery in genetic sequence data. @@ -11,3 +15,6 @@ version | toolchain ``0.57721`` | ``GCC/11.2.0`` ``0.57721`` | ``GCC/9.3.0`` ``0.57721`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WCSLIB.md b/docs/version-specific/supported-software/w/WCSLIB.md index 6fff42d74..7155afd44 100644 --- a/docs/version-specific/supported-software/w/WCSLIB.md +++ b/docs/version-specific/supported-software/w/WCSLIB.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WCSLIB The FITS "World Coordinate System" (WCS) standard defines keywords and usage that provide for the description of astronomical coordinate systems in a FITS image header. @@ -9,3 +13,6 @@ version | toolchain ``7.11`` | ``GCC/11.2.0`` ``7.11`` | ``GCC/11.3.0`` ``7.11`` | ``GCC/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WCT.md b/docs/version-specific/supported-software/w/WCT.md index baad34f5f..86598d8f3 100644 --- a/docs/version-specific/supported-software/w/WCT.md +++ b/docs/version-specific/supported-software/w/WCT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WCT NOAA's Weather and Climate Toolkit (WCT) is free, platform independent software distributed from NOAA's National Centers for Environmental Information (NCEI). The WCT allows the visualization and data export of weather and climate data, including Radar, Satellite and Model data. The WCT also provides access to weather/climate web services provided from NCEI and other organizations. @@ -7,3 +11,6 @@ NOAA's Weather and Climate Toolkit (WCT) is free, platform independent software version | versionsuffix | toolchain --------|---------------|---------- ``4.6.0`` | ``-Java-11`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WEKA.md b/docs/version-specific/supported-software/w/WEKA.md index 2bf41675a..698aac63c 100644 --- a/docs/version-specific/supported-software/w/WEKA.md +++ b/docs/version-specific/supported-software/w/WEKA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WEKA Weka is a collection of machine learning algorithms for data mining tasks. The algorithms can either be applied directly to a dataset or called from your own Java code. Weka contains tools for data pre-processing, classification, regression, clustering, association rules, and visualization. It is also well-suited for developing new machine learning schemes. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``3.6.12`` | ``-Java-1.7.0_80`` | ``system`` ``3.7.0`` | ``-Java-1.7.0_80`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WFA2.md b/docs/version-specific/supported-software/w/WFA2.md index c6206be87..b3613f922 100644 --- a/docs/version-specific/supported-software/w/WFA2.md +++ b/docs/version-specific/supported-software/w/WFA2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WFA2 The wavefront alignment (WFA) algorithm is an exact gap-affine algorithm that takes advantage of homologous regions between the sequences to accelerate the alignment process. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.3.3`` | ``GCCcore/11.3.0`` ``2.3.4`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WGDgc.md b/docs/version-specific/supported-software/w/WGDgc.md index 88b9ef578..4e07dd080 100644 --- a/docs/version-specific/supported-software/w/WGDgc.md +++ b/docs/version-specific/supported-software/w/WGDgc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WGDgc Analysis of whole genome duplications (WGD) and triplications (WGT) using comparative gene count data @@ -7,3 +11,6 @@ Analysis of whole genome duplications (WGD) and triplications (WGT) using compar version | versionsuffix | toolchain --------|---------------|---------- ``1.3`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WHAM.md b/docs/version-specific/supported-software/w/WHAM.md index 5538001ac..ab5fc8808 100644 --- a/docs/version-specific/supported-software/w/WHAM.md +++ b/docs/version-specific/supported-software/w/WHAM.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WHAM An implementation of WHAM: the Weighted Histogram Analysis Method @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``2.0.10.2`` | | ``intel/2020a`` ``2.0.9.1`` | ``-kj_mol`` | ``intel/2019a`` ``2.0.9.1`` | | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WIEN2k.md b/docs/version-specific/supported-software/w/WIEN2k.md index 2c3b44368..b3ae0d7f9 100644 --- a/docs/version-specific/supported-software/w/WIEN2k.md +++ b/docs/version-specific/supported-software/w/WIEN2k.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WIEN2k The program package WIEN2k allows to perform electronic structure calculations of solids using density functional theory (DFT). It is based on the full-potential (linearized) augmented plane-wave ((L)APW) + local orbitals (lo) method, one among the most accurate schemes for band structure calculations. WIEN2k is an all-electron scheme including relativistic effects and has many features. @@ -17,3 +21,6 @@ version | toolchain ``21.1`` | ``intel/2021a`` ``21.1`` | ``intel/2021b`` ``23.2`` | ``intel/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WISExome.md b/docs/version-specific/supported-software/w/WISExome.md index 4cbba6e38..0ae34893c 100644 --- a/docs/version-specific/supported-software/w/WISExome.md +++ b/docs/version-specific/supported-software/w/WISExome.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WISExome A within-sample comparison approach to detect copy number variations in whole exome sequencing data @@ -7,3 +11,6 @@ A within-sample comparison approach to detect copy number variations in whole ex version | versionsuffix | toolchain --------|---------------|---------- ``20180517`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WPS.md b/docs/version-specific/supported-software/w/WPS.md index cbcadf737..9d2009576 100644 --- a/docs/version-specific/supported-software/w/WPS.md +++ b/docs/version-specific/supported-software/w/WPS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WPS WRF Preprocessing System (WPS) for WRF. The Weather Research and Forecasting (WRF) Model is a next-generation mesoscale numerical weather prediction system designed to serve both operational forecasting and atmospheric research needs. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``4.2`` | ``-dmpar`` | ``foss/2020b`` ``4.3.1`` | ``-dmpar`` | ``foss/2021a`` ``4.4`` | ``-dmpar`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WRF-Fire.md b/docs/version-specific/supported-software/w/WRF-Fire.md index 4bbfc2d49..2375ab0d0 100644 --- a/docs/version-specific/supported-software/w/WRF-Fire.md +++ b/docs/version-specific/supported-software/w/WRF-Fire.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WRF-Fire WRF-Fire combines the Weather Research and Forecasting model (WRF) with a fire code implementing a surface fire behavior model, called SFIRE, based on semi-empirical formulas calculate the rate of spread of the fire line (the interface between burning and unignited fuel) based on fuel properties, wind velocities from WRF, and terrain slope. The fire spread is implemented by the level set method. @@ -7,3 +11,6 @@ WRF-Fire combines the Weather Research and Forecasting model (WRF) with a fire c version | versionsuffix | toolchain --------|---------------|---------- ``20170221`` | ``-dmpar`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WRF.md b/docs/version-specific/supported-software/w/WRF.md index 1733af3b2..83625a5f9 100644 --- a/docs/version-specific/supported-software/w/WRF.md +++ b/docs/version-specific/supported-software/w/WRF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WRF The Weather Research and Forecasting (WRF) Model is a next-generation mesoscale numerical weather prediction system designed to serve both operational forecasting and atmospheric research needs. @@ -22,3 +26,6 @@ version | versionsuffix | toolchain ``4.3`` | ``-dmpar`` | ``foss/2021a`` ``4.4`` | ``-dmpar`` | ``foss/2022a`` ``4.4.1`` | ``-dmpar`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WSClean.md b/docs/version-specific/supported-software/w/WSClean.md index 2fb72cb8d..df84c91b7 100644 --- a/docs/version-specific/supported-software/w/WSClean.md +++ b/docs/version-specific/supported-software/w/WSClean.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WSClean WSClean (w-stacking clean) is a fast generic widefield imager. It implements several gridding algorithms and offers fully-automated multi-scale multi-frequency deconvolution. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``3.4`` | ``foss/2022a`` ``3.4`` | ``foss/2023b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/Wannier90.md b/docs/version-specific/supported-software/w/Wannier90.md index 0cff1068d..d3c3337d7 100644 --- a/docs/version-specific/supported-software/w/Wannier90.md +++ b/docs/version-specific/supported-software/w/Wannier90.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Wannier90 A tool for obtaining maximally-localised Wannier functions @@ -29,3 +33,6 @@ version | versionsuffix | toolchain ``3.1.0`` | | ``intel/2022a`` ``3.1.0`` | | ``intel/2022b`` ``3.1.0`` | | ``intel/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WannierTools.md b/docs/version-specific/supported-software/w/WannierTools.md index e87d47807..fa0f870fa 100644 --- a/docs/version-specific/supported-software/w/WannierTools.md +++ b/docs/version-specific/supported-software/w/WannierTools.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WannierTools an open-source software package for novel topological materials @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.3.0`` | ``intel/2018a`` ``2.5.1`` | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/Wayland.md b/docs/version-specific/supported-software/w/Wayland.md index 8ef2cec6b..a1583bad2 100644 --- a/docs/version-specific/supported-software/w/Wayland.md +++ b/docs/version-specific/supported-software/w/Wayland.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Wayland Wayland is a project to define a protocol for a compositor to talk to its clients as well as a library implementation of the protocol. The compositor can be a standalone display server running on Linux kernel modesetting and evdev input devices, an X application, or a wayland client itself. The clients can be traditional applications, X servers (rootless or fullscreen) or other display servers. @@ -12,3 +16,6 @@ version | toolchain ``1.22.0`` | ``GCCcore/12.2.0`` ``1.22.0`` | ``GCCcore/12.3.0`` ``1.22.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/Waylandpp.md b/docs/version-specific/supported-software/w/Waylandpp.md index de77b07c2..78c23ca29 100644 --- a/docs/version-specific/supported-software/w/Waylandpp.md +++ b/docs/version-specific/supported-software/w/Waylandpp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Waylandpp Wayland is an object oriented display protocol, which features request and events. Requests can be seen as method calls on certain objects, whereas events can be seen as signals of an object. This makes the Wayland protocol a perfect candidate for a C++ binding. The goal of this library is to create such a C++ binding for Wayland using the most modern C++ technology currently available, providing an easy to use C++ API to Wayland. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.0.0`` | ``GCCcore/11.2.0`` ``1.0.0`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WebKitGTK+.md b/docs/version-specific/supported-software/w/WebKitGTK+.md index b7c7ab0f9..b6be8fd42 100644 --- a/docs/version-specific/supported-software/w/WebKitGTK+.md +++ b/docs/version-specific/supported-software/w/WebKitGTK+.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WebKitGTK+ WebKitGTK+ is a full-featured port of the WebKit rendering engine, suitable for projects requiring any kind of web integration, from hybrid HTML/CSS applications to full-fledged web browsers. It offers WebKit’s full functionality and is useful in a wide range of systems from desktop computers to embedded systems like phones, tablets, and televisions. @@ -11,3 +15,6 @@ version | toolchain ``2.27.4`` | ``GCC/8.3.0`` ``2.37.1`` | ``GCC/11.2.0`` ``2.40.4`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WebSocket++.md b/docs/version-specific/supported-software/w/WebSocket++.md index 03d4ec828..6168e316c 100644 --- a/docs/version-specific/supported-software/w/WebSocket++.md +++ b/docs/version-specific/supported-software/w/WebSocket++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WebSocket++ WebSocket++ is an open source (BSD license) header only C++ library that implements RFC6455 The WebSocket Protocol. @@ -7,3 +11,6 @@ WebSocket++ is an open source (BSD license) header only C++ library that implem version | toolchain --------|---------- ``0.8.1`` | ``gompi/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WhatsHap.md b/docs/version-specific/supported-software/w/WhatsHap.md index f1ff00536..b2638ede3 100644 --- a/docs/version-specific/supported-software/w/WhatsHap.md +++ b/docs/version-specific/supported-software/w/WhatsHap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WhatsHap WhatsHap is a software for phasing genomic variants using DNA sequencing reads, also called read-based phasing or haplotype assembly. It is especially suitable for long reads, but works also well with short reads. @@ -12,3 +16,6 @@ version | toolchain ``1.7`` | ``foss/2022a`` ``2.1`` | ``foss/2022b`` ``2.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WildMagic.md b/docs/version-specific/supported-software/w/WildMagic.md index 91bbf1fef..a7035f360 100644 --- a/docs/version-specific/supported-software/w/WildMagic.md +++ b/docs/version-specific/supported-software/w/WildMagic.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WildMagic Wild Magic 5.17 @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``5.17`` | ``GCCcore/10.3.0`` ``5.17`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/Winnowmap.md b/docs/version-specific/supported-software/w/Winnowmap.md index 69779fce0..7a5d73d96 100644 --- a/docs/version-specific/supported-software/w/Winnowmap.md +++ b/docs/version-specific/supported-software/w/Winnowmap.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Winnowmap Winnowmap is a long-read mapping algorithm, and a result of our exploration into superior minimizer sampling techniques. @@ -7,3 +11,6 @@ Winnowmap is a long-read mapping algorithm, and a result of our exploration int version | toolchain --------|---------- ``1.0`` | ``GCC/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/WisecondorX.md b/docs/version-specific/supported-software/w/WisecondorX.md index 088651cc5..fcff75bf4 100644 --- a/docs/version-specific/supported-software/w/WisecondorX.md +++ b/docs/version-specific/supported-software/w/WisecondorX.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # WisecondorX WisecondorX -- an evolved WISECONDOR @@ -7,3 +11,6 @@ WisecondorX -- an evolved WISECONDOR version | versionsuffix | toolchain --------|---------------|---------- ``1.1.6`` | ``-Python-3.8.2`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/index.md b/docs/version-specific/supported-software/w/index.md index fdc3cda51..3d516023c 100644 --- a/docs/version-specific/supported-software/w/index.md +++ b/docs/version-specific/supported-software/w/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (w) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - *w* - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + * [waLBerla](waLBerla.md) * [wandb](wandb.md) * [Wannier90](Wannier90.md) diff --git a/docs/version-specific/supported-software/w/waLBerla.md b/docs/version-specific/supported-software/w/waLBerla.md index 0c785306d..c1eafc543 100644 --- a/docs/version-specific/supported-software/w/waLBerla.md +++ b/docs/version-specific/supported-software/w/waLBerla.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # waLBerla Widely applicable Lattics-Boltzmann from Erlangen is a block-structured high-performance framework for multiphysics simulations @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``6.1`` | ``foss/2021a`` ``6.1`` | ``foss/2022b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/wandb.md b/docs/version-specific/supported-software/w/wandb.md index 7ebe0d251..536b41a2e 100644 --- a/docs/version-specific/supported-software/w/wandb.md +++ b/docs/version-specific/supported-software/w/wandb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # wandb CLI and Python API for Weights and Biases: a tool for visualizing and tracking your machine learning experiments. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``0.13.6`` | | ``GCC/11.3.0`` ``0.16.1`` | | ``GCC/12.3.0`` ``0.8.30`` | ``-Python-3.7.4`` | ``gcccuda/2019b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/wcwidth.md b/docs/version-specific/supported-software/w/wcwidth.md index 1f73380d9..6ba2f3671 100644 --- a/docs/version-specific/supported-software/w/wcwidth.md +++ b/docs/version-specific/supported-software/w/wcwidth.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # wcwidth wcwidth is a low-level Python library to simplify Terminal emulation. @@ -11,3 +15,6 @@ version | versionsuffix | toolchain ``0.1.7`` | ``-Python-2.7.12`` | ``foss/2016b`` ``0.1.7`` | ``-Python-2.7.12`` | ``intel/2016b`` ``0.1.7`` | ``-Python-3.5.2`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/webin-cli.md b/docs/version-specific/supported-software/w/webin-cli.md index 9f264f1a9..3afb9f8e2 100644 --- a/docs/version-specific/supported-software/w/webin-cli.md +++ b/docs/version-specific/supported-software/w/webin-cli.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # webin-cli The Webin command line submission interface can be used to validate, upload and submit files to the European Nucleotide Archive (ENA) @@ -7,3 +11,6 @@ The Webin command line submission interface can be used to validate, upload and version | toolchain --------|---------- ``1.8.9`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/wfdb.md b/docs/version-specific/supported-software/w/wfdb.md index 64f457682..7105efecc 100644 --- a/docs/version-specific/supported-software/w/wfdb.md +++ b/docs/version-specific/supported-software/w/wfdb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # wfdb The native Python waveform-database (WFDB) package. A library of tools for reading, writing, and processing WFDB signals and annotations. @@ -7,3 +11,6 @@ The native Python waveform-database (WFDB) package. A library of tools for read version | toolchain --------|---------- ``4.1.2`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/wget.md b/docs/version-specific/supported-software/w/wget.md index e5c4ad57b..ef98cb2a6 100644 --- a/docs/version-specific/supported-software/w/wget.md +++ b/docs/version-specific/supported-software/w/wget.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # wget GNU Wget is a free software package for retrieving files using HTTP, HTTPS and FTP, the most widely-used Internet protocols. It is a non-interactive commandline tool, so it may easily be called from scripts, cron jobs, terminals without X-Windows support, etc. @@ -18,3 +22,6 @@ version | toolchain ``1.21.3`` | ``GCCcore/11.3.0`` ``1.21.4`` | ``GCCcore/13.2.0`` ``1.24.5`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/wgsim.md b/docs/version-specific/supported-software/w/wgsim.md index 26681eb6c..457ed8134 100644 --- a/docs/version-specific/supported-software/w/wgsim.md +++ b/docs/version-specific/supported-software/w/wgsim.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # wgsim Wgsim is a small tool for simulating sequence reads from a reference genome. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``20111017`` | ``GCC/10.2.0`` ``20111017`` | ``GCC/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/wheel.md b/docs/version-specific/supported-software/w/wheel.md index a2dab1264..0be27c182 100644 --- a/docs/version-specific/supported-software/w/wheel.md +++ b/docs/version-specific/supported-software/w/wheel.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # wheel A built-package format for Python. @@ -25,3 +29,6 @@ version | versionsuffix | toolchain ``0.31.1`` | ``-Python-3.6.6`` | ``foss/2018b`` ``0.31.1`` | ``-Python-2.7.15`` | ``fosscuda/2018b`` ``0.31.1`` | ``-Python-3.6.6`` | ``fosscuda/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/wkhtmltopdf.md b/docs/version-specific/supported-software/w/wkhtmltopdf.md index 7609bdeb6..76b58df32 100644 --- a/docs/version-specific/supported-software/w/wkhtmltopdf.md +++ b/docs/version-specific/supported-software/w/wkhtmltopdf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # wkhtmltopdf wkhtmltopdf and wkhtmltoimage are open source (LGPLv3) command line tools to render HTML into PDF and various image formats using the Qt WebKit rendering engine. These run entirely headless and do not require a display or display service. @@ -7,3 +11,6 @@ wkhtmltopdf and wkhtmltoimage are open source (LGPLv3) command line tools to ren version | versionsuffix | toolchain --------|---------------|---------- ``0.12.3`` | ``-Linux-x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/worker.md b/docs/version-specific/supported-software/w/worker.md index d99f913e9..903d5b699 100644 --- a/docs/version-specific/supported-software/w/worker.md +++ b/docs/version-specific/supported-software/w/worker.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # worker The Worker framework has been developed to help deal with parameter exploration experiments that would otherwise result in many jobs, forcing the user resort to scripting to retain her sanity; see also https://vscentrum.be/neutral/documentation/cluster-doc/running-jobs/worker-framework. @@ -19,3 +23,6 @@ version | versionsuffix | toolchain ``1.6.7`` | ``-intel-2017b`` | ``system`` ``1.6.8`` | ``-intel-2018a`` | ``system`` ``1.6.8`` | ``-intel-2018b`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/wpebackend-fdo.md b/docs/version-specific/supported-software/w/wpebackend-fdo.md index 55b9abb66..fe853cad6 100644 --- a/docs/version-specific/supported-software/w/wpebackend-fdo.md +++ b/docs/version-specific/supported-software/w/wpebackend-fdo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # wpebackend-fdo WPE WebKit allows embedders to create simple and performant systems based on Web platform technologies. It is a WebKit port designed with flexibility and hardware acceleration in mind, leveraging common 3D graphics APIs for best performance. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.13.1`` | ``GCCcore/11.2.0`` ``1.14.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/wrapt.md b/docs/version-specific/supported-software/w/wrapt.md index 5fb6e354d..c051b2b1c 100644 --- a/docs/version-specific/supported-software/w/wrapt.md +++ b/docs/version-specific/supported-software/w/wrapt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # wrapt The aim of the wrapt module is to provide a transparent object proxy for Python, which can be used as the basis for the construction of function wrappers and decorator functions. @@ -10,3 +14,6 @@ version | toolchain ``1.15.0`` | ``gfbf/2022b`` ``1.15.0`` | ``gfbf/2023a`` ``1.15.0`` | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/wrf-python.md b/docs/version-specific/supported-software/w/wrf-python.md index 8f96c31ed..7202b0ed6 100644 --- a/docs/version-specific/supported-software/w/wrf-python.md +++ b/docs/version-specific/supported-software/w/wrf-python.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # wrf-python A collection of diagnostic and interpolation routines for use with output from the Weather Research and Forecasting (WRF-ARW) Model. @@ -9,3 +13,6 @@ version | versionsuffix | toolchain ``1.2.0`` | ``-Python-3.6.4`` | ``intel/2018a`` ``1.3.1`` | ``-Python-3.6.6`` | ``intel/2018b`` ``1.3.4.1`` | | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/wtdbg2.md b/docs/version-specific/supported-software/w/wtdbg2.md index bfba307bb..6c64fb3e5 100644 --- a/docs/version-specific/supported-software/w/wtdbg2.md +++ b/docs/version-specific/supported-software/w/wtdbg2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # wtdbg2 Wtdbg2 is a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanopore Technologies (ONT). It assembles raw reads without error correction and then builds the consensus from intermediate assembly output. @@ -10,3 +14,6 @@ version | toolchain ``2.5`` | ``GCCcore/11.2.0`` ``2.5`` | ``GCCcore/11.3.0`` ``2.5`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/wxPropertyGrid.md b/docs/version-specific/supported-software/w/wxPropertyGrid.md index ee0509a8e..8c976d1ee 100644 --- a/docs/version-specific/supported-software/w/wxPropertyGrid.md +++ b/docs/version-specific/supported-software/w/wxPropertyGrid.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # wxPropertyGrid wxPropertyGrid is a property sheet control for wxWidgets. In other words, it is a specialized two-column grid for editing properties such as strings, numbers, flagsets, string arrays, and colours. @@ -7,3 +11,6 @@ wxPropertyGrid is a property sheet control for wxWidgets. In other words, it is version | toolchain --------|---------- ``1.4.15`` | ``GCC/4.9.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/wxPython.md b/docs/version-specific/supported-software/w/wxPython.md index 19b336e02..8f9007910 100644 --- a/docs/version-specific/supported-software/w/wxPython.md +++ b/docs/version-specific/supported-software/w/wxPython.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # wxPython wxPython is a GUI toolkit for the Python programming language. It allows Python programmers to create programs with a robust, highly functional graphical user interface, simply and easily. It is implemented as a Python extension module (native code) that wraps the popular wxWidgets cross platform GUI library, which is written in C++. @@ -18,3 +22,6 @@ version | versionsuffix | toolchain ``4.1.1`` | | ``foss/2021a`` ``4.2.0`` | | ``foss/2021b`` ``4.2.1`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/w/wxWidgets.md b/docs/version-specific/supported-software/w/wxWidgets.md index f006cc517..7edcce515 100644 --- a/docs/version-specific/supported-software/w/wxWidgets.md +++ b/docs/version-specific/supported-software/w/wxWidgets.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # wxWidgets wxWidgets is a C++ library that lets developers create applications for Windows, Mac OS X, Linux and other platforms with a single code base. It has popular language bindings for Python, Perl, Ruby and many other languages, and unlike other cross-platform toolkits, wxWidgets gives applications a truly native look and feel because it uses the platform's native API rather than emulating the GUI. @@ -16,3 +20,6 @@ version | toolchain ``3.2.1`` | ``GCC/11.3.0`` ``3.2.2.1`` | ``GCC/12.2.0`` ``3.2.2.1`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/X11.md b/docs/version-specific/supported-software/x/X11.md index 79be361a5..953015f42 100644 --- a/docs/version-specific/supported-software/x/X11.md +++ b/docs/version-specific/supported-software/x/X11.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # X11 The X Window System (X11) is a windowing system for bitmap displays @@ -25,3 +29,6 @@ version | toolchain ``20221110`` | ``GCCcore/12.2.0`` ``20230603`` | ``GCCcore/12.3.0`` ``20231019`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XALT.md b/docs/version-specific/supported-software/x/XALT.md index 2cc6cdb86..69eec87b1 100644 --- a/docs/version-specific/supported-software/x/XALT.md +++ b/docs/version-specific/supported-software/x/XALT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XALT XALT 2 is a tool to allow a site to track user executables and library usage on a cluster. When installed it can tell a site what are the top executables by Node-Hours or by the number of users or the number of times it is run. XALT 2 also tracks library usage as well. XALT 2 can also track package use by R, MATLAB or Python. It tracks both MPI and non-MPI programs. @@ -7,3 +11,6 @@ XALT 2 is a tool to allow a site to track user executables and library usage o version | toolchain --------|---------- ``2.8.4`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XBeach.md b/docs/version-specific/supported-software/x/XBeach.md index f208f5299..cf59411c8 100644 --- a/docs/version-specific/supported-software/x/XBeach.md +++ b/docs/version-specific/supported-software/x/XBeach.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XBeach XBeach is a two-dimensional model for wave propagation, long waves and mean flow, sediment transport and morphological changes of the nearshore area, beaches, dunes and backbarrier during storms. @@ -7,3 +11,6 @@ XBeach is a two-dimensional model for wave propagation, long waves and mean flow version | toolchain --------|---------- ``20230831`` | ``gompi/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XCFun.md b/docs/version-specific/supported-software/x/XCFun.md index 1c9e549ca..48c187d1c 100644 --- a/docs/version-specific/supported-software/x/XCFun.md +++ b/docs/version-specific/supported-software/x/XCFun.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XCFun Arbitrary order exchange-correlation functional library @@ -13,3 +17,6 @@ version | versionsuffix | toolchain ``2.1.1`` | | ``GCCcore/12.2.0`` ``20180122`` | ``-Python-2.7.14`` | ``intel/2017b`` ``20190127`` | ``-Python-3.7.2`` | ``foss/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XCrySDen.md b/docs/version-specific/supported-software/x/XCrySDen.md index 69a0c6dd0..3ed5a45d2 100644 --- a/docs/version-specific/supported-software/x/XCrySDen.md +++ b/docs/version-specific/supported-software/x/XCrySDen.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XCrySDen XCrySDen is a crystalline and molecular structure visualisation program aiming at display of isosurfaces and contours, which can be superimposed on crystalline structures and interactively rotated and manipulated. @@ -13,3 +17,6 @@ version | toolchain ``1.6.2`` | ``intel/2019b`` ``1.6.2`` | ``intel/2021b`` ``1.6.2`` | ``intel/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XGBoost.md b/docs/version-specific/supported-software/x/XGBoost.md index 8b79ce104..068f18b55 100644 --- a/docs/version-specific/supported-software/x/XGBoost.md +++ b/docs/version-specific/supported-software/x/XGBoost.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XGBoost XGBoost is an optimized distributed gradient boosting library designed to be highly efficient, flexible and portable. @@ -18,3 +22,6 @@ version | versionsuffix | toolchain ``1.7.2`` | | ``foss/2022a`` ``2.0.2`` | | ``gfbf/2023a`` ``20171120`` | ``-Java-1.8.0_152`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XGrafix.md b/docs/version-specific/supported-software/x/XGrafix.md index 9f68a1619..1ce08c431 100644 --- a/docs/version-specific/supported-software/x/XGrafix.md +++ b/docs/version-specific/supported-software/x/XGrafix.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XGrafix A graphics library and controller for physics simulation programs. 3-d surface plots, scatter plots, 2-d line plots. @@ -7,3 +11,6 @@ A graphics library and controller for physics simulation programs. 3-d surface p version | toolchain --------|---------- ``2.41`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XKeyboardConfig.md b/docs/version-specific/supported-software/x/XKeyboardConfig.md index 9b20cce08..cff1bfb46 100644 --- a/docs/version-specific/supported-software/x/XKeyboardConfig.md +++ b/docs/version-specific/supported-software/x/XKeyboardConfig.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XKeyboardConfig The non-arch keyboard configuration database for X Window. The goal is to provide the consistent, well-structured, frequently released open source of X keyboard configuration data for X Window System implementations (free, open source and commercial). The project is targeted to XKB-based systems. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.17`` | ``foss/2016a`` ``2.17`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XMDS2.md b/docs/version-specific/supported-software/x/XMDS2.md index b4cdca95f..77c25dcd9 100644 --- a/docs/version-specific/supported-software/x/XMDS2.md +++ b/docs/version-specific/supported-software/x/XMDS2.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XMDS2 The purpose of XMDS2 is to simplify the process of creating simulations that solve systems of initial-value first-order partial and ordinary differential equations. @@ -7,3 +11,6 @@ The purpose of XMDS2 is to simplify the process of creating simulations that so version | versionsuffix | toolchain --------|---------------|---------- ``2.2.3`` | ``-Python-2.7.15`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XML-Compile.md b/docs/version-specific/supported-software/x/XML-Compile.md index 082493fbd..30a36598a 100644 --- a/docs/version-specific/supported-software/x/XML-Compile.md +++ b/docs/version-specific/supported-software/x/XML-Compile.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XML-Compile Perl module for compilation based XML processing @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.63`` | ``GCCcore/11.2.0`` ``1.63`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XML-LibXML.md b/docs/version-specific/supported-software/x/XML-LibXML.md index a229081d5..826ea7bf8 100644 --- a/docs/version-specific/supported-software/x/XML-LibXML.md +++ b/docs/version-specific/supported-software/x/XML-LibXML.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XML-LibXML Perl binding for libxml2 @@ -22,3 +26,6 @@ version | versionsuffix | toolchain ``2.0207`` | | ``GCCcore/11.3.0`` ``2.0208`` | | ``GCCcore/12.2.0`` ``2.0209`` | | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XML-Parser.md b/docs/version-specific/supported-software/x/XML-Parser.md index 46e0b11b1..898e28e86 100644 --- a/docs/version-specific/supported-software/x/XML-Parser.md +++ b/docs/version-specific/supported-software/x/XML-Parser.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XML-Parser This is a Perl extension interface to James Clark's XML parser, expat. @@ -22,3 +26,6 @@ version | versionsuffix | toolchain ``2.46`` | ``-Perl-5.32.1`` | ``GCCcore/10.3.0`` ``2.46`` | ``-Perl-5.34.1`` | ``GCCcore/11.3.0`` ``2.46`` | ``-Perl-5.36.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XMLSec.md b/docs/version-specific/supported-software/x/XMLSec.md index 380c6164c..a22e6a8c3 100644 --- a/docs/version-specific/supported-software/x/XMLSec.md +++ b/docs/version-specific/supported-software/x/XMLSec.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XMLSec XML Security Library is a C library based on LibXML2, supporting major XML security standards. @@ -7,3 +11,6 @@ XML Security Library is a C library based on LibXML2, supporting major XML secu version | toolchain --------|---------- ``1.2.26`` | ``GCCcore/6.4.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XMLStarlet.md b/docs/version-specific/supported-software/x/XMLStarlet.md index d6c821053..58ca231aa 100644 --- a/docs/version-specific/supported-software/x/XMLStarlet.md +++ b/docs/version-specific/supported-software/x/XMLStarlet.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XMLStarlet Command line XML tool @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.6.1`` | ``GCCcore/6.4.0`` ``1.6.1`` | ``foss/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XOOPIC.md b/docs/version-specific/supported-software/x/XOOPIC.md index f39962e7b..c9e4f4962 100644 --- a/docs/version-specific/supported-software/x/XOOPIC.md +++ b/docs/version-specific/supported-software/x/XOOPIC.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XOOPIC XOOPIC is a two-dimensional 3-velocity particle-in-cell simulator. It can handle electrostatic and electromagnetic models, has a large variety of boundary conditions, supports multiple gasses and gas chemistry, and is easily reconfigurable via an input file. @@ -7,3 +11,6 @@ XOOPIC is a two-dimensional 3-velocity particle-in-cell simulator. It can handl version | toolchain --------|---------- ``20210302`` | ``foss/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XPLOR-NIH.md b/docs/version-specific/supported-software/x/XPLOR-NIH.md index c1119e29f..79cfa75db 100644 --- a/docs/version-specific/supported-software/x/XPLOR-NIH.md +++ b/docs/version-specific/supported-software/x/XPLOR-NIH.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XPLOR-NIH A System for X-ray Crystallography and NMR @@ -7,3 +11,6 @@ A System for X-ray Crystallography and NMR version | versionsuffix | toolchain --------|---------------|---------- ``3.4`` | ``-Linux_x86_64`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XSD.md b/docs/version-specific/supported-software/x/XSD.md index 70d184b96..8c1cc0bb6 100644 --- a/docs/version-specific/supported-software/x/XSD.md +++ b/docs/version-specific/supported-software/x/XSD.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XSD CodeSynthesis XSD is an open-source, cross-platform W3C XML Schema to C++ data binding compiler. @@ -7,3 +11,6 @@ CodeSynthesis XSD is an open-source, cross-platform W3C XML Schema to C++ data b version | toolchain --------|---------- ``4.0.0`` | ``GCCcore/8.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XTandem.md b/docs/version-specific/supported-software/x/XTandem.md index fa40e90bb..c02b24e37 100644 --- a/docs/version-specific/supported-software/x/XTandem.md +++ b/docs/version-specific/supported-software/x/XTandem.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XTandem X!Tandem open source is software that can match tandem mass spectra with peptide sequences, in a process that has come to be known as protein identification. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``17.02.01.4`` | ``GCC/6.4.0-2.28`` ``17.02.01.4`` | ``iccifort/2017.4.196-GCC-6.4.0-2.28`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XZ.md b/docs/version-specific/supported-software/x/XZ.md index c29bfb542..af3535fd6 100644 --- a/docs/version-specific/supported-software/x/XZ.md +++ b/docs/version-specific/supported-software/x/XZ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XZ xz: XZ utilities @@ -38,3 +42,6 @@ version | versionsuffix | toolchain ``5.4.2`` | | ``GCCcore/13.1.0`` ``5.4.4`` | | ``GCCcore/13.2.0`` ``5.4.5`` | | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/Xerces-C++.md b/docs/version-specific/supported-software/x/Xerces-C++.md index 52a0ace5c..fecdea57a 100644 --- a/docs/version-specific/supported-software/x/Xerces-C++.md +++ b/docs/version-specific/supported-software/x/Xerces-C++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Xerces-C++ Xerces-C++ is a validating XML parser written in a portable subset of C++. Xerces-C++ makes it easy to give your application the ability to read and write XML data. A shared library is provided for parsing, generating, manipulating, and validating XML documents using the DOM, SAX, and SAX2 APIs. @@ -18,3 +22,6 @@ version | toolchain ``3.2.4`` | ``GCCcore/12.2.0`` ``3.2.4`` | ``GCCcore/12.3.0`` ``3.2.5`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/XlsxWriter.md b/docs/version-specific/supported-software/x/XlsxWriter.md index 772110c6b..418192ac9 100644 --- a/docs/version-specific/supported-software/x/XlsxWriter.md +++ b/docs/version-specific/supported-software/x/XlsxWriter.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # XlsxWriter A Python module for creating Excel XLSX files @@ -13,3 +17,6 @@ version | toolchain ``3.1.2`` | ``GCCcore/12.2.0`` ``3.1.3`` | ``GCCcore/12.3.0`` ``3.1.9`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/Xmipp.md b/docs/version-specific/supported-software/x/Xmipp.md index e01481f1c..409bd48c6 100644 --- a/docs/version-specific/supported-software/x/Xmipp.md +++ b/docs/version-specific/supported-software/x/Xmipp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Xmipp Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. @@ -10,3 +14,6 @@ version | versionsuffix | toolchain ``3.19.04-Apollo`` | ``-Python-2.7.15`` | ``fosscuda/2019a`` ``3.22.07-Helios`` | ``-CUDA-11.7.0`` | ``foss/2022a`` ``3.22.07-Helios`` | | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/Xvfb.md b/docs/version-specific/supported-software/x/Xvfb.md index d98e4225c..34a2d9df6 100644 --- a/docs/version-specific/supported-software/x/Xvfb.md +++ b/docs/version-specific/supported-software/x/Xvfb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Xvfb Xvfb is an X server that can run on machines with no display hardware and no physical input devices. It emulates a dumb framebuffer using virtual memory. @@ -16,3 +20,6 @@ version | toolchain ``21.1.6`` | ``GCCcore/12.2.0`` ``21.1.8`` | ``GCCcore/12.3.0`` ``21.1.9`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/index.md b/docs/version-specific/supported-software/x/index.md index e446e2566..7cb736fbc 100644 --- a/docs/version-specific/supported-software/x/index.md +++ b/docs/version-specific/supported-software/x/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (x) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - *x* - [../y/index.md](y) - [../z/index.md](z) + * [X11](X11.md) * [x13as](x13as.md) * [x264](x264.md) diff --git a/docs/version-specific/supported-software/x/x13as.md b/docs/version-specific/supported-software/x/x13as.md index 4e8d5db95..17c0cf821 100644 --- a/docs/version-specific/supported-software/x/x13as.md +++ b/docs/version-specific/supported-software/x/x13as.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # x13as X-13ARIMA-SEATS is seasonal adjustment software produced, distributed, and maintained by the Census Bureau. Features of X-13ARIMA-SEATS include: - Extensive time series modeling and model selection capabilities for linear regression models with ARIMA errors (regARIMA models); - The capability to generate ARIMA model-based seasonal adjustment using a version of the SEATS software originally developed by Victor Gómez and Agustín Maravall at the Bank of Spain, as well as nonparametric adjustments from the X-11 procedure; - Diagnostics of the quality and stability of the adjustments achieved under the options selected; - The ability to efficiently process many series at once. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1-1-b59`` | ``GCCcore/10.2.0`` ``1-1-b59`` | ``GCCcore/11.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/x264.md b/docs/version-specific/supported-software/x/x264.md index f6b728074..5a57369cd 100644 --- a/docs/version-specific/supported-software/x/x264.md +++ b/docs/version-specific/supported-software/x/x264.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # x264 x264 is a free software library and application for encoding video streams into the H.264/MPEG-4 AVC compression format, and is released under the terms of the GNU GPL. @@ -30,3 +34,6 @@ version | toolchain ``20230226`` | ``GCCcore/12.2.0`` ``20230226`` | ``GCCcore/12.3.0`` ``20231019`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/x265.md b/docs/version-specific/supported-software/x/x265.md index 3b229b809..00df81d53 100644 --- a/docs/version-specific/supported-software/x/x265.md +++ b/docs/version-specific/supported-software/x/x265.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # x265 x265 is a free software library and application for encoding video streams into the H.265 AVC compression format, and is released under the terms of the GNU GPL. @@ -22,3 +26,6 @@ version | toolchain ``3.5`` | ``GCCcore/12.2.0`` ``3.5`` | ``GCCcore/12.3.0`` ``3.5`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xCell.md b/docs/version-specific/supported-software/x/xCell.md index d2da331ae..22b3bdbc3 100644 --- a/docs/version-specific/supported-software/x/xCell.md +++ b/docs/version-specific/supported-software/x/xCell.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xCell xCell is a gene signatures-based method learned from thousands of pure cell types from various sources. @@ -7,3 +11,6 @@ xCell is a gene signatures-based method learned from thousands of pure cell type version | versionsuffix | toolchain --------|---------------|---------- ``1.12`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xESMF.md b/docs/version-specific/supported-software/x/xESMF.md index b05cff8a7..8e60f15fd 100644 --- a/docs/version-specific/supported-software/x/xESMF.md +++ b/docs/version-specific/supported-software/x/xESMF.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xESMF xESMF: Universal Regridder for Geospatial Data @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``0.3.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``0.3.0`` | | ``intel/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xarray.md b/docs/version-specific/supported-software/x/xarray.md index 51c6ba147..f6b9ec493 100644 --- a/docs/version-specific/supported-software/x/xarray.md +++ b/docs/version-specific/supported-software/x/xarray.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xarray xarray (formerly xray) is an open source project and Python package that aims to bring the labeled data power of pandas to the physical sciences, by providing N-dimensional variants of the core pandas data structures. @@ -32,3 +36,6 @@ version | versionsuffix | toolchain ``2022.9.0`` | | ``foss/2022a`` ``2023.4.2`` | | ``gfbf/2022b`` ``2023.9.0`` | | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xbitmaps.md b/docs/version-specific/supported-software/x/xbitmaps.md index 86640e27e..dd225c652 100644 --- a/docs/version-specific/supported-software/x/xbitmaps.md +++ b/docs/version-specific/supported-software/x/xbitmaps.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xbitmaps provides bitmaps for x @@ -10,3 +14,6 @@ version | toolchain ``1.1.1`` | ``intel/2016a`` ``1.1.1`` | ``system`` ``1.1.2`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xcb-proto.md b/docs/version-specific/supported-software/x/xcb-proto.md index 1bc4a4272..65c541d8c 100644 --- a/docs/version-specific/supported-software/x/xcb-proto.md +++ b/docs/version-specific/supported-software/x/xcb-proto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xcb-proto The X protocol C-language Binding (XCB) is a replacement for Xlib featuring a small footprint, latency hiding, direct access to the protocol, improved threading support, and extensibility. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.11`` | ``system`` ``1.13`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xcb-util-image.md b/docs/version-specific/supported-software/x/xcb-util-image.md index a6413fdc7..3d4f6e848 100644 --- a/docs/version-specific/supported-software/x/xcb-util-image.md +++ b/docs/version-specific/supported-software/x/xcb-util-image.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xcb-util-image The xcb-util-image package provides additional extensions to the XCB library. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.4.0`` | ``foss/2016a`` ``0.4.0`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xcb-util-keysyms.md b/docs/version-specific/supported-software/x/xcb-util-keysyms.md index 2aadddd12..594357e7e 100644 --- a/docs/version-specific/supported-software/x/xcb-util-keysyms.md +++ b/docs/version-specific/supported-software/x/xcb-util-keysyms.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xcb-util-keysyms The xcb-util-keysyms package contains a library for handling standard X key constants and conversion to/from keycodes. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.4.0`` | ``foss/2016a`` ``0.4.0`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xcb-util-renderutil.md b/docs/version-specific/supported-software/x/xcb-util-renderutil.md index c3ec26d38..7f335ecd3 100644 --- a/docs/version-specific/supported-software/x/xcb-util-renderutil.md +++ b/docs/version-specific/supported-software/x/xcb-util-renderutil.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xcb-util-renderutil The xcb-util-renderutil package provides additional extensions to the XCB library. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.3.9`` | ``foss/2016a`` ``0.3.9`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xcb-util-wm.md b/docs/version-specific/supported-software/x/xcb-util-wm.md index a34cfb6ef..5ce4cd060 100644 --- a/docs/version-specific/supported-software/x/xcb-util-wm.md +++ b/docs/version-specific/supported-software/x/xcb-util-wm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xcb-util-wm The xcb-util-wm package contains libraries which provide client and window-manager helpers for EWMH and ICCCM. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.4.1`` | ``foss/2016a`` ``0.4.1`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xcb-util.md b/docs/version-specific/supported-software/x/xcb-util.md index 5506cddf7..e96035c1d 100644 --- a/docs/version-specific/supported-software/x/xcb-util.md +++ b/docs/version-specific/supported-software/x/xcb-util.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xcb-util The xcb-util package provides additional extensions to the XCB library, many that were previously found in Xlib, but are not part of core X protocol @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``0.4.0`` | ``foss/2016a`` ``0.4.0`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xclip.md b/docs/version-specific/supported-software/x/xclip.md index 529bc81ef..5475c2f96 100644 --- a/docs/version-specific/supported-software/x/xclip.md +++ b/docs/version-specific/supported-software/x/xclip.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xclip xclip is a command line utility that is designed to run on any system with an X11 implementation. @@ -7,3 +11,6 @@ xclip is a command line utility that is designed to run on any system with an X1 version | toolchain --------|---------- ``0.13`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xdotool.md b/docs/version-specific/supported-software/x/xdotool.md index 1cc0f256f..9e1c2034f 100644 --- a/docs/version-specific/supported-software/x/xdotool.md +++ b/docs/version-specific/supported-software/x/xdotool.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xdotool xdotool lets you simulate keyboard input and mouse activity, move and resize windows, etc. It does this using X11’s XTEST extension and other Xlib functions. @@ -7,3 +11,6 @@ xdotool lets you simulate keyboard input and mouse activity, move and resize win version | toolchain --------|---------- ``3.20211022.1`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xextproto.md b/docs/version-specific/supported-software/x/xextproto.md index 7344aa009..718ab2804 100644 --- a/docs/version-specific/supported-software/x/xextproto.md +++ b/docs/version-specific/supported-software/x/xextproto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xextproto XExtProto protocol headers. @@ -10,3 +14,6 @@ version | toolchain ``7.3.0`` | ``gimkl/2.11.5`` ``7.3.0`` | ``intel/2016a`` ``7.3.0`` | ``intel/2017b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xf86vidmodeproto.md b/docs/version-specific/supported-software/x/xf86vidmodeproto.md index 5e4166427..043e435ea 100644 --- a/docs/version-specific/supported-software/x/xf86vidmodeproto.md +++ b/docs/version-specific/supported-software/x/xf86vidmodeproto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xf86vidmodeproto X11 XFree86 video mode extension protocol headers. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.3.1`` | ``foss/2016a`` ``2.3.1`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xineramaproto.md b/docs/version-specific/supported-software/x/xineramaproto.md index 3b7521210..fe5fad51c 100644 --- a/docs/version-specific/supported-software/x/xineramaproto.md +++ b/docs/version-specific/supported-software/x/xineramaproto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xineramaproto X protocol and ancillary headers for xinerama @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.2.1`` | ``foss/2016a`` ``1.2.1`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xmitgcm.md b/docs/version-specific/supported-software/x/xmitgcm.md index a5c844b02..6fd2944ea 100644 --- a/docs/version-specific/supported-software/x/xmitgcm.md +++ b/docs/version-specific/supported-software/x/xmitgcm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xmitgcm xmitgcm is a python package for reading MITgcm binary MDS files into xarray data structures. By storing data in dask arrays, xmitgcm enables parallel, out-of-core analysis of MITgcm output data. @@ -7,3 +11,6 @@ xmitgcm is a python package for reading MITgcm binary MDS files into xarray dat version | toolchain --------|---------- ``0.5.2`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xmlf90.md b/docs/version-specific/supported-software/x/xmlf90.md index e05abe5b5..a07b66dd3 100644 --- a/docs/version-specific/supported-software/x/xmlf90.md +++ b/docs/version-specific/supported-software/x/xmlf90.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xmlf90 xmlf90 is a basic XML parsing library written in Fortran. @@ -16,3 +20,6 @@ version | toolchain ``1.5.4`` | ``intel-compilers/2021.2.0`` ``1.5.4`` | ``intel-compilers/2021.4.0`` ``1.5.6`` | ``GCC/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xonsh.md b/docs/version-specific/supported-software/x/xonsh.md index 5f55e2b43..60f28f340 100644 --- a/docs/version-specific/supported-software/x/xonsh.md +++ b/docs/version-specific/supported-software/x/xonsh.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xonsh Xonsh is a Python-ish, BASHwards-looking shell language and command prompt. @@ -7,3 +11,6 @@ Xonsh is a Python-ish, BASHwards-looking shell language and command prompt. version | toolchain --------|---------- ``0.3.2`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xorg-macros.md b/docs/version-specific/supported-software/x/xorg-macros.md index 622532985..f79aa53cb 100644 --- a/docs/version-specific/supported-software/x/xorg-macros.md +++ b/docs/version-specific/supported-software/x/xorg-macros.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xorg-macros X.org macros utilities. @@ -27,3 +31,6 @@ version | toolchain ``1.20.0`` | ``GCCcore/12.3.0`` ``1.20.0`` | ``GCCcore/13.2.0`` ``1.20.1`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xpdf.md b/docs/version-specific/supported-software/x/xpdf.md index c871d4c7d..606bf0d30 100644 --- a/docs/version-specific/supported-software/x/xpdf.md +++ b/docs/version-specific/supported-software/x/xpdf.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xpdf Xpdf was first released in 1995. It was written, and is still developed, by Derek Noonburg. Xpdf is a free PDF viewer and toolkit, including a text extractor, image converter, HTML converter, and more. Most of the tools are available as open source. @@ -7,3 +11,6 @@ Xpdf was first released in 1995. It was written, and is still developed, by version | toolchain --------|---------- ``4.04`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xprop.md b/docs/version-specific/supported-software/x/xprop.md index 0cf411ae9..f5a621466 100644 --- a/docs/version-specific/supported-software/x/xprop.md +++ b/docs/version-specific/supported-software/x/xprop.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xprop The xprop utility is for displaying window and font properties in an X server. One window or font is selected using the command line arguments or possibly in the case of a window, by clicking on the desired window. A list of properties is then given, possibly with formatting information. @@ -25,3 +29,6 @@ version | versionsuffix | toolchain ``1.2.5`` | | ``GCCcore/12.2.0`` ``1.2.6`` | | ``GCCcore/12.3.0`` ``1.2.7`` | | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xproto.md b/docs/version-specific/supported-software/x/xproto.md index 0c36754e3..3ae3eb0dd 100644 --- a/docs/version-specific/supported-software/x/xproto.md +++ b/docs/version-specific/supported-software/x/xproto.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xproto X protocol and ancillary headers @@ -21,3 +25,6 @@ version | toolchain ``7.0.31`` | ``GCCcore/7.3.0`` ``7.0.31`` | ``GCCcore/8.3.0`` ``7.0.31`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xtb.md b/docs/version-specific/supported-software/x/xtb.md index 80b397e50..fcd650848 100644 --- a/docs/version-specific/supported-software/x/xtb.md +++ b/docs/version-specific/supported-software/x/xtb.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xtb xtb - An extended tight-binding semi-empirical program package. @@ -17,3 +21,6 @@ version | versionsuffix | toolchain ``6.6.1`` | | ``gfbf/2022b`` ``6.6.1`` | | ``gfbf/2023a`` ``6.7.0`` | | ``gfbf/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xtensor.md b/docs/version-specific/supported-software/x/xtensor.md index 0ab0ef0f3..8587de1d0 100644 --- a/docs/version-specific/supported-software/x/xtensor.md +++ b/docs/version-specific/supported-software/x/xtensor.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xtensor xtensor is a C++ library meant for numerical analysis with multi-dimensional array expressions. @@ -7,3 +11,6 @@ xtensor is a C++ library meant for numerical analysis with multi-dimensional arr version | toolchain --------|---------- ``0.24.0`` | ``foss/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xtrans.md b/docs/version-specific/supported-software/x/xtrans.md index 7cbe9524e..787e758e6 100644 --- a/docs/version-specific/supported-software/x/xtrans.md +++ b/docs/version-specific/supported-software/x/xtrans.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xtrans xtrans includes a number of routines to make X implementations transport-independent; at time of writing, it includes support for UNIX sockets, IPv4, IPv6, and DECnet. @@ -10,3 +14,6 @@ version | toolchain ``1.3.5`` | ``foss/2016a`` ``1.3.5`` | ``gimkl/2.11.5`` ``1.3.5`` | ``intel/2016a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xxHash.md b/docs/version-specific/supported-software/x/xxHash.md index ee11c67bc..b7388de18 100644 --- a/docs/version-specific/supported-software/x/xxHash.md +++ b/docs/version-specific/supported-software/x/xxHash.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xxHash xxHash is an extremely fast non-cryptographic hash algorithm, working at RAM speed limit. @@ -12,3 +16,6 @@ version | toolchain ``0.8.1`` | ``GCCcore/12.2.0`` ``0.8.2`` | ``GCCcore/12.3.0`` ``0.8.2`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/x/xxd.md b/docs/version-specific/supported-software/x/xxd.md index 796c396d7..fe7ecaf9d 100644 --- a/docs/version-specific/supported-software/x/xxd.md +++ b/docs/version-specific/supported-software/x/xxd.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # xxd xxd is part of the VIM package and serves to convert to/from hexdumps of binary files. @@ -13,3 +17,6 @@ version | toolchain ``9.0.1696`` | ``GCCcore/12.2.0`` ``9.0.2112`` | ``GCCcore/12.3.0`` ``9.1.0307`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/y/YACS.md b/docs/version-specific/supported-software/y/YACS.md index fbd689940..a1c0d27b3 100644 --- a/docs/version-specific/supported-software/y/YACS.md +++ b/docs/version-specific/supported-software/y/YACS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # YACS YACS was created as a lightweight library to define and manage system configurations, such as those commonly found in software designed for scientific experimentation. These "configurations" typically cover concepts like hyperparameters used in training a machine learning model or configurable model hyperparameters, such as the depth of a convolutional neural network. @@ -12,3 +16,6 @@ version | toolchain ``0.1.8`` | ``GCCcore/11.3.0`` ``0.1.8`` | ``GCCcore/12.3.0`` ``0.1.8`` | ``GCCcore/8.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/y/YANK.md b/docs/version-specific/supported-software/y/YANK.md index cd2f1658c..bd93880db 100644 --- a/docs/version-specific/supported-software/y/YANK.md +++ b/docs/version-specific/supported-software/y/YANK.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # YANK A GPU-accelerated Python framework for exploring algorithms for alchemical free energy calculations @@ -7,3 +11,6 @@ A GPU-accelerated Python framework for exploring algorithms for alchemical free version | versionsuffix | toolchain --------|---------------|---------- ``0.25.2`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/y/YAPS.md b/docs/version-specific/supported-software/y/YAPS.md index f349e75fe..8b9167cfd 100644 --- a/docs/version-specific/supported-software/y/YAPS.md +++ b/docs/version-specific/supported-software/y/YAPS.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # YAPS YAPS - Yet Another Positioning Solver @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.1.0`` | ``-R-3.5.1`` | ``foss/2018b`` ``1.1.0`` | ``-R-3.6.0`` | ``intel/2019a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/y/YAXT.md b/docs/version-specific/supported-software/y/YAXT.md index db0cdd989..5c7f9a3ab 100644 --- a/docs/version-specific/supported-software/y/YAXT.md +++ b/docs/version-specific/supported-software/y/YAXT.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # YAXT Yet Another eXchange Tool @@ -20,3 +24,6 @@ version | toolchain ``0.9.1`` | ``gompi/2021a`` ``0.9.2`` | ``iimpi/2021b`` ``0.9.2.1`` | ``gompi/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/y/YODA.md b/docs/version-specific/supported-software/y/YODA.md index 3935f785b..9ae604984 100644 --- a/docs/version-specific/supported-software/y/YODA.md +++ b/docs/version-specific/supported-software/y/YODA.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # YODA Yet more Objects for (High Energy Physics) Data Analysis @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``1.9.7`` | ``GCC/11.3.0`` ``1.9.9`` | ``GCC/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/y/Yade.md b/docs/version-specific/supported-software/y/Yade.md index 243705984..bfb13ee73 100644 --- a/docs/version-specific/supported-software/y/Yade.md +++ b/docs/version-specific/supported-software/y/Yade.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Yade Yade is an extensible open-source framework for discrete numerical models, focused on Discrete Element Method. The computation parts are written in c++ using flexible object model, allowing independent implementation of new alogrithms and interfaces. Python is used for rapid and concise scene construction, simulation control, postprocessing and debugging. @@ -12,3 +16,6 @@ version | versionsuffix | toolchain ``2016.06a`` | ``-Python-2.7.12`` | ``intel/2016b`` ``2017.01a`` | ``-Python-2.7.12`` | ``intel/2016b`` ``2018.02b`` | ``-Python-2.7.14`` | ``intel/2018a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/y/Yambo.md b/docs/version-specific/supported-software/y/Yambo.md index e10eebba3..2b141b100 100644 --- a/docs/version-specific/supported-software/y/Yambo.md +++ b/docs/version-specific/supported-software/y/Yambo.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Yambo Yambo is a FORTRAN/C code for Many-Body calculations in solid state and molecular physics. Yambo relies on the Kohn-Sham wavefunctions generated by two DFT public codes: abinit, and PWscf. @@ -9,3 +13,6 @@ version | toolchain ``3.4.2`` | ``intel/2016.02-GCC-4.9`` ``5.0.4`` | ``intel/2021a`` ``5.1.2`` | ``intel/2021b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/y/Yasm.md b/docs/version-specific/supported-software/y/Yasm.md index f43e61bfc..ff463f936 100644 --- a/docs/version-specific/supported-software/y/Yasm.md +++ b/docs/version-specific/supported-software/y/Yasm.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Yasm Yasm: Complete rewrite of the NASM assembler with BSD license @@ -26,3 +30,6 @@ version | toolchain ``1.3.0`` | ``intel/2016a`` ``1.3.0`` | ``intel/2016b`` ``1.3.0`` | ``intel/2017a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/y/Yices.md b/docs/version-specific/supported-software/y/Yices.md index dfa0f40da..199a58b87 100644 --- a/docs/version-specific/supported-software/y/Yices.md +++ b/docs/version-specific/supported-software/y/Yices.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Yices Yices 2 is an SMT solver that decides the satisfiability of formulas containing uninterpreted function symbols with equality, real and integer arithmetic, bitvectors, scalar types, and tuples. Yices 2 supports both linear and nonlinear arithmetic. @@ -8,3 +12,6 @@ version | toolchain --------|---------- ``2.6.2`` | ``GCCcore/10.2.0`` ``2.6.4`` | ``GCCcore/12.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/y/index.md b/docs/version-specific/supported-software/y/index.md index 1fcbe6007..8abfae44c 100644 --- a/docs/version-specific/supported-software/y/index.md +++ b/docs/version-specific/supported-software/y/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (y) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - *y* - [../z/index.md](z) + * [YACS](YACS.md) * [Yade](Yade.md) * [yaff](yaff.md) diff --git a/docs/version-specific/supported-software/y/yaff.md b/docs/version-specific/supported-software/y/yaff.md index 09a6527e3..5aff306d2 100644 --- a/docs/version-specific/supported-software/y/yaff.md +++ b/docs/version-specific/supported-software/y/yaff.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # yaff Yaff stands for 'Yet another force field'. It is a pythonic force-field code. @@ -23,3 +27,6 @@ version | versionsuffix | toolchain ``1.6.0`` | ``-Python-3.7.2`` | ``intel/2019a`` ``1.6.0`` | ``-Python-3.7.4`` | ``intel/2019b`` ``1.6.0`` | ``-Python-3.8.2`` | ``intel/2020a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/y/yaml-cpp.md b/docs/version-specific/supported-software/y/yaml-cpp.md index 991ae8e41..9ad1db892 100644 --- a/docs/version-specific/supported-software/y/yaml-cpp.md +++ b/docs/version-specific/supported-software/y/yaml-cpp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # yaml-cpp yaml-cpp is a YAML parser and emitter in C++ matching the YAML 1.2 spec @@ -11,3 +15,6 @@ version | toolchain ``0.7.0`` | ``GCCcore/12.2.0`` ``0.7.0`` | ``GCCcore/12.3.0`` ``0.8.0`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/y/yt.md b/docs/version-specific/supported-software/y/yt.md index 3ac5fa6ec..e6e89aacf 100644 --- a/docs/version-specific/supported-software/y/yt.md +++ b/docs/version-specific/supported-software/y/yt.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # yt yt is an open-source, permissively-licensed python package for analyzing and visualizing volumetric data. @@ -7,3 +11,6 @@ yt is an open-source, permissively-licensed python package for analyzing and vi version | toolchain --------|---------- ``4.3.0`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/Z3.md b/docs/version-specific/supported-software/z/Z3.md index 363aac28c..ea2c8e30f 100644 --- a/docs/version-specific/supported-software/z/Z3.md +++ b/docs/version-specific/supported-software/z/Z3.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Z3 Z3 is a theorem prover from Microsoft Research with support for bitvectors, booleans, arrays, floating point numbers, strings, and other data types. This module includes z3_solver, the Python interface of Z3. @@ -22,3 +26,6 @@ version | versionsuffix | toolchain ``4.8.16`` | | ``GCCcore/11.3.0`` ``4.8.9`` | | ``GCCcore/8.3.0`` ``4.8.9`` | | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/ZIMPL.md b/docs/version-specific/supported-software/z/ZIMPL.md index 49b75760b..3d35f644d 100644 --- a/docs/version-specific/supported-software/z/ZIMPL.md +++ b/docs/version-specific/supported-software/z/ZIMPL.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ZIMPL ZIMPL is a little language to translate the mathematical model of a problem into a linear or nonlinear (mixed-) integer mathematical program expressed in .lp or .mps file format which can be read and (hopefully) solved by a LP or MIP solver. @@ -7,3 +11,6 @@ ZIMPL is a little language to translate the mathematical model of a problem into version | toolchain --------|---------- ``3.3.4`` | ``GCCcore/11.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/ZPAQ.md b/docs/version-specific/supported-software/z/ZPAQ.md index d8c8a6d77..39d0752b0 100644 --- a/docs/version-specific/supported-software/z/ZPAQ.md +++ b/docs/version-specific/supported-software/z/ZPAQ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ZPAQ zpaq is a free and open source (GPL v3) incremental, journaling command-line archiver for Windows, Linux and Mac OS/X @@ -7,3 +11,6 @@ zpaq is a free and open source (GPL v3) incremental, journaling command-line ar version | toolchain --------|---------- ``7.00`` | ``GCC/4.8.2`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/Zeo++.md b/docs/version-specific/supported-software/z/Zeo++.md index 9e5d399c1..f1ab1b0f0 100644 --- a/docs/version-specific/supported-software/z/Zeo++.md +++ b/docs/version-specific/supported-software/z/Zeo++.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Zeo++ Zeo++ is a software package for analysis of crystalline porous materials. Zeo++ can be used to perform geometry-based analysis of structure and topology of the void space inside a material, to assemble or alternate structures as well as to generate structure representations to be used in structure similarity calculations. Zeo++ can be used to either analyze a single structure or perform high-throughput analysis of a large database. @@ -7,3 +11,6 @@ Zeo++ is a software package for analysis of crystalline porous materials. Ze version | toolchain --------|---------- ``0.3`` | ``intel-compilers/2023.1.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/ZeroMQ.md b/docs/version-specific/supported-software/z/ZeroMQ.md index 837e05752..95a4bb5df 100644 --- a/docs/version-specific/supported-software/z/ZeroMQ.md +++ b/docs/version-specific/supported-software/z/ZeroMQ.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # ZeroMQ ZeroMQ looks like an embeddable networking library but acts like a concurrency framework. It gives you sockets that carry atomic messages across various transports like in-process, inter-process, TCP, and multicast. You can connect sockets N-to-N with patterns like fanout, pub-sub, task distribution, and request-reply. It's fast enough to be the fabric for clustered products. Its asynchronous I/O model gives you scalable multicore applications, built as asynchronous message-processing tasks. It has a score of language APIs and runs on most operating systems. @@ -32,3 +36,6 @@ version | toolchain ``4.3.4`` | ``GCCcore/12.2.0`` ``4.3.4`` | ``GCCcore/12.3.0`` ``4.3.5`` | ``GCCcore/13.2.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/Zgoubi.md b/docs/version-specific/supported-software/z/Zgoubi.md index adddfc1a2..118042597 100644 --- a/docs/version-specific/supported-software/z/Zgoubi.md +++ b/docs/version-specific/supported-software/z/Zgoubi.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Zgoubi Zgoubi is a ray-tracing code in use for charged particle beam dynamics simulations. It can simulate beam dynamics in a large variety of machines and optical systems. @@ -7,3 +11,6 @@ Zgoubi is a ray-tracing code in use for charged particle beam dynamics simulatio version | toolchain --------|---------- ``6.0.2`` | ``GCCcore/10.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/Zip.md b/docs/version-specific/supported-software/z/Zip.md index e817ddeb6..1be3a0275 100644 --- a/docs/version-specific/supported-software/z/Zip.md +++ b/docs/version-specific/supported-software/z/Zip.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Zip Zip is a compression and file packaging/archive utility. Although highly compatible both with PKWARE's PKZIP and PKUNZIP utilities for MS-DOS and with Info-ZIP's own UnZip, our primary objectives have been portability and other-than-MSDOS functionality @@ -18,3 +22,6 @@ version | toolchain ``3.0`` | ``GCCcore/8.2.0`` ``3.0`` | ``GCCcore/8.3.0`` ``3.0`` | ``GCCcore/9.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/Zopfli.md b/docs/version-specific/supported-software/z/Zopfli.md index 9020b3d0e..ea2891243 100644 --- a/docs/version-specific/supported-software/z/Zopfli.md +++ b/docs/version-specific/supported-software/z/Zopfli.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # Zopfli Zopfli Compression Algorithm is a compression library programmed in C to perform very good, but slow, deflate or zlib compression. @@ -10,3 +14,6 @@ version | toolchain ``1.0.3`` | ``GCCcore/10.3.0`` ``1.0.3`` | ``GCCcore/11.3.0`` ``1.0.3`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/index.md b/docs/version-specific/supported-software/z/index.md index 31c0287ca..a6761f651 100644 --- a/docs/version-specific/supported-software/z/index.md +++ b/docs/version-specific/supported-software/z/index.md @@ -1,5 +1,11 @@ +--- +search: + boost: 0.5 +--- # List of supported software (z) +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - *z* + * [Z3](Z3.md) * [zarr](zarr.md) * [Zeo++](Zeo++.md) diff --git a/docs/version-specific/supported-software/z/zUMIs.md b/docs/version-specific/supported-software/z/zUMIs.md index d8d6124cd..9a49223e0 100644 --- a/docs/version-specific/supported-software/z/zUMIs.md +++ b/docs/version-specific/supported-software/z/zUMIs.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # zUMIs A fast and flexible pipeline to process RNA sequencing data with UMIs. @@ -7,3 +11,6 @@ A fast and flexible pipeline to process RNA sequencing data with UMIs. version | versionsuffix | toolchain --------|---------------|---------- ``2.9.7`` | ``-R-4.3.2`` | ``foss/2023a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/zarr.md b/docs/version-specific/supported-software/z/zarr.md index 380b6ae81..173c02d8b 100644 --- a/docs/version-specific/supported-software/z/zarr.md +++ b/docs/version-specific/supported-software/z/zarr.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # zarr Zarr is a Python package providing an implementation of compressed, chunked, N-dimensional arrays, designed for use in parallel computing. @@ -14,3 +18,6 @@ version | versionsuffix | toolchain ``2.17.1`` | | ``foss/2023a`` ``2.4.0`` | ``-Python-3.8.2`` | ``foss/2020a`` ``2.8.1`` | | ``foss/2020b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/zeus-mcmc.md b/docs/version-specific/supported-software/z/zeus-mcmc.md index 611331ec7..65317e43d 100644 --- a/docs/version-specific/supported-software/z/zeus-mcmc.md +++ b/docs/version-specific/supported-software/z/zeus-mcmc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # zeus-mcmc Zeus is a Python implementation of the Ensemble Slice Sampling method. @@ -7,3 +11,6 @@ Zeus is a Python implementation of the Ensemble Slice Sampling method. version | toolchain --------|---------- ``2.5.4`` | ``foss/2022a`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/zfp.md b/docs/version-specific/supported-software/z/zfp.md index 7312f6086..0603b2fd8 100644 --- a/docs/version-specific/supported-software/z/zfp.md +++ b/docs/version-specific/supported-software/z/zfp.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # zfp zfp is a compressed format for representing multidimensional floating-point and integer arrays. zfp provides compressed-array classes that support high throughput read and write random access to individual array elements. zfp also supports serial and parallel (OpenMP and CUDA) compression of whole arrays, e.g., for applications that read and write large data sets to and from disk. @@ -11,3 +15,6 @@ version | toolchain ``1.0.0`` | ``GCCcore/11.3.0`` ``1.0.0`` | ``GCCcore/9.3.0`` ``1.0.1`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/zingeR.md b/docs/version-specific/supported-software/z/zingeR.md index 66ce1649a..585aef435 100644 --- a/docs/version-specific/supported-software/z/zingeR.md +++ b/docs/version-specific/supported-software/z/zingeR.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # zingeR Zero-Inflated Negative binomial Gene Expression in R @@ -7,3 +11,6 @@ Zero-Inflated Negative binomial Gene Expression in R version | versionsuffix | toolchain --------|---------------|---------- ``20180131`` | ``-R-3.5.1`` | ``foss/2018b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/zlib-ng.md b/docs/version-specific/supported-software/z/zlib-ng.md index 4dacf71b6..d91484e22 100644 --- a/docs/version-specific/supported-software/z/zlib-ng.md +++ b/docs/version-specific/supported-software/z/zlib-ng.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # zlib-ng zlib data compression library for the next generation systems @@ -10,3 +14,6 @@ version | toolchain ``2.0.6`` | ``GCCcore/10.3.0`` ``2.0.7`` | ``GCCcore/11.3.0`` ``2.1.6`` | ``GCCcore/12.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/zlib.md b/docs/version-specific/supported-software/z/zlib.md index 6617610ff..c5adc063a 100644 --- a/docs/version-specific/supported-software/z/zlib.md +++ b/docs/version-specific/supported-software/z/zlib.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # zlib zlib is designed to be a free, general-purpose, legally unencumbered -- that is, not covered by any patents -- lossless data-compression library for use on virtually any computer hardware and operating system. @@ -75,3 +79,6 @@ version | toolchain ``1.3.1`` | ``GCCcore/13.3.0`` ``1.3.1`` | ``GCCcore/14.1.0`` ``1.3.1`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/zlibbioc.md b/docs/version-specific/supported-software/z/zlibbioc.md index ae65fa1fc..f0833e84c 100644 --- a/docs/version-specific/supported-software/z/zlibbioc.md +++ b/docs/version-specific/supported-software/z/zlibbioc.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # zlibbioc This package uses the source code of zlib-1.2.5 to create libraries for systems that do not have these available via other means. @@ -8,3 +12,6 @@ version | versionsuffix | toolchain --------|---------------|---------- ``1.18.0`` | ``-R-3.2.3`` | ``intel/2016a`` ``1.20.0`` | ``-R-3.3.1`` | ``intel/2016b`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/zsh.md b/docs/version-specific/supported-software/z/zsh.md index 1579b454a..c14b378d3 100644 --- a/docs/version-specific/supported-software/z/zsh.md +++ b/docs/version-specific/supported-software/z/zsh.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # zsh Zsh is a shell designed for interactive use, although it is also a powerful scripting language. @@ -11,3 +15,6 @@ version | toolchain ``5.8`` | ``GCC/8.3.0`` ``5.8`` | ``system`` ``5.9`` | ``system`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) + diff --git a/docs/version-specific/supported-software/z/zstd.md b/docs/version-specific/supported-software/z/zstd.md index 5ce904d7e..922b4ccee 100644 --- a/docs/version-specific/supported-software/z/zstd.md +++ b/docs/version-specific/supported-software/z/zstd.md @@ -1,3 +1,7 @@ +--- +search: + boost: 0.5 +--- # zstd Zstandard is a real-time compression algorithm, providing high compression ratios. It offers a very wide range of compression/speed trade-off, while being backed by a very fast decoder. It also offers a special mode for small data, called dictionary compression, and can create dictionaries from any sample set. @@ -20,3 +24,6 @@ version | toolchain ``1.5.5`` | ``GCCcore/12.3.0`` ``1.5.5`` | ``GCCcore/13.2.0`` ``1.5.6`` | ``GCCcore/13.3.0`` + +[../0/index.md](0) - [../a/index.md](a) - [../b/index.md](b) - [../c/index.md](c) - [../d/index.md](d) - [../e/index.md](e) - [../f/index.md](f) - [../g/index.md](g) - [../h/index.md](h) - [../i/index.md](i) - [../j/index.md](j) - [../k/index.md](k) - [../l/index.md](l) - [../m/index.md](m) - [../n/index.md](n) - [../o/index.md](o) - [../p/index.md](p) - [../q/index.md](q) - [../r/index.md](r) - [../s/index.md](s) - [../t/index.md](t) - [../u/index.md](u) - [../v/index.md](v) - [../w/index.md](w) - [../x/index.md](x) - [../y/index.md](y) - [../z/index.md](z) +