Two discrepencies in OMIM
prefix
#1485
Labels
identifiers
Used to group tickets around prefix management and identifier mappings
OMIM
prefix
#1485
(This is a minor issue, so please feel free to close it as won't-fix if these issues aren't important to Biolink.)
Here is the definition of
OMIM
in Biolink:biolink-model/project/prefixmap/biolink_model_prefix_map.json
Line 131 in 1698cf9
When comparing their definitions to the OMIM linking documentation I noticed two discrepencies:
http://purl.obolibrary.org/obo/OMIM_
does not actually work as an IRI stem, e.g. OMIM:608450 ("BLACE") cannot be resolved as http://purl.obolibrary.org/obo/OMIM_608450. The OMIM documentation says that either https://omim.org/entry/608450 or https://omim.org/MIM:608450 should be used instead. I suggest we change the IRI stem forOMIM
unless it would be too disruptive.MIM:
, notOMIM:
. This would be a pretty major change, but would bring us in line with e.g. the Disease Ontology, which is changing xrefs fromOMIM:
toMIM:
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