diff --git a/Orange/data/util.py b/Orange/data/util.py
index bf5588abd57..bee1f7feac4 100644
--- a/Orange/data/util.py
+++ b/Orange/data/util.py
@@ -79,7 +79,8 @@ def __init__(self, compute_shared, variable=None):
                                                    types.FunctionType)) \
                 and not redefines_eq_and_hash(compute_shared):
             warnings.warn(f"{type(compute_shared).__name__} should define "
-                          f"__eq__ and __hash__ to be used for compute_shared")
+                          f"__eq__ and __hash__ to be used for compute_shared",
+                          stacklevel=2)
 
     def __call__(self, data, shared_data=None):
         """Fallback if common parts are not passed."""
diff --git a/Orange/data/variable.py b/Orange/data/variable.py
index 83909e0d376..100b34b7e9c 100644
--- a/Orange/data/variable.py
+++ b/Orange/data/variable.py
@@ -379,7 +379,8 @@ def __init__(self, name="", compute_value=None, *, sparse=False):
                 and not type(compute_value).__dict__.get("InheritEq", False):
             warnings.warn(f"{type(compute_value).__name__} should define "
                           "__eq__ and __hash__ to be used for compute_value\n"
-                          "or set InheritEq = True if inherited methods suffice")
+                          "or set InheritEq = True if inherited methods suffice",
+                          stacklevel=3)
 
         self._compute_value = compute_value
         self.unknown_str = MISSING_VALUES